"sequence_id","alias","species","description","type"
"105735","No alias","Selaginella moellendorffii ","proliferating cell nuclear antigen 2","protein_coding"
"112010","No alias","Selaginella moellendorffii ","Pseudouridine synthase family protein","protein_coding"
"165790","No alias","Selaginella moellendorffii ","rotamase CYP 3","protein_coding"
"168384","No alias","Selaginella moellendorffii ","homocysteine methyltransferase 2","protein_coding"
"184747","No alias","Selaginella moellendorffii ","U2 small nuclear ribonucleoprotein B","protein_coding"
"404637","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"409933","No alias","Selaginella moellendorffii ","Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain","protein_coding"
"413338","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"413468","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"415403","No alias","Selaginella moellendorffii ","RGPR-related","protein_coding"
"416255","No alias","Selaginella moellendorffii ","Eukaryotic protein of unknown function (DUF842)","protein_coding"
"418417","No alias","Selaginella moellendorffii ","Class II aminoacyl-tRNA and biotin synthetases superfamily protein","protein_coding"
"422080","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"426137","No alias","Selaginella moellendorffii ","zinc knuckle (CCHC-type) family protein","protein_coding"
"427056","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"428856","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"441625","No alias","Selaginella moellendorffii ","Cell division control, Cdc6","protein_coding"
"74838","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"79750","No alias","Selaginella moellendorffii ","pentatricopeptide (PPR) repeat-containing protein","protein_coding"
"8400","No alias","Selaginella moellendorffii ","SC35-like splicing factor 30A","protein_coding"
"95956","No alias","Selaginella moellendorffii ","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"A4A49_25467","No alias","Nicotiana attenuata","hypothetical protein","protein_coding"
"A4A49_31983","No alias","Nicotiana attenuata","proliferating cell nuclear antigen","protein_coding"
"A4A49_52257","No alias","Nicotiana attenuata","hypothetical protein","protein_coding"
"AC205274.3_FG001","No alias","Zea mays","pathogenesis-related gene 1","protein_coding"
"AC209242.3_FG003","No alias","Zea mays","Peptidase C13 family","protein_coding"
"AC213398.3_FG007","No alias","Zea mays","Function unknown","protein_coding"
"AC235544.1_FG004","No alias","Zea mays","conserved oligomeric Golgi complex component-related / COG complex component-related","protein_coding"
"At1g02205","No alias","Arabidopsis thaliana","Fatty acid hydroxylase superfamily [Source:TAIR;Acc:AT1G02205]","protein_coding"
"At1g03220","No alias","Arabidopsis thaliana","Eukaryotic aspartyl protease family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZVS4]","protein_coding"
"At1g03310","No alias","Arabidopsis thaliana","ISA2 [Source:UniProtKB/TrEMBL;Acc:A0A178WGA8]","protein_coding"
"At1g03360","No alias","Arabidopsis thaliana","RRP4 [Source:UniProtKB/TrEMBL;Acc:A0A178W3N1]","protein_coding"
"At1g03630","No alias","Arabidopsis thaliana","Protochlorophyllide reductase C, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O48741]","protein_coding"
"At1g04410","No alias","Arabidopsis thaliana","Malate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178W4H0]","protein_coding"
"At1g04620","No alias","Arabidopsis thaliana","7-hydroxymethyl chlorophyll a reductase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8GS60]","protein_coding"
"At1g07370","No alias","Arabidopsis thaliana","Proliferating cellular nuclear antigen 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M7Q7]","protein_coding"
"At1g08130","No alias","Arabidopsis thaliana","DNA ligase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q42572]","protein_coding"
"At1g10490","No alias","Arabidopsis thaliana","RNA cytidine acetyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIK4]","protein_coding"
"At1g11350","No alias","Arabidopsis thaliana","G-type lectin S-receptor-like serine/threonine-protein kinase SD1-13 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPZ9]","protein_coding"
"At1g14580","No alias","Arabidopsis thaliana","C2H2-like zinc finger protein [Source:TAIR;Acc:AT1G14580]","protein_coding"
"At1g15690","No alias","Arabidopsis thaliana","VHP1 [Source:UniProtKB/TrEMBL;Acc:A0A178WA14]","protein_coding"
"At1g17600","No alias","Arabidopsis thaliana","Disease resistance protein (TIR-NBS-LRR class) family [Source:UniProtKB/TrEMBL;Acc:F4I901]","protein_coding"
"At1g18170","No alias","Arabidopsis thaliana","Peptidyl-prolyl cis-trans isomerase FKBP17-2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LDY5]","protein_coding"
"At1g18360","No alias","Arabidopsis thaliana","Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8VYJ0]","protein_coding"
"At1g18850","No alias","Arabidopsis thaliana","F6A14.6 protein [Source:UniProtKB/TrEMBL;Acc:Q9M9V4]","protein_coding"
"At1g21650","No alias","Arabidopsis thaliana","Protein translocase subunit SecA [Source:UniProtKB/TrEMBL;Acc:F4HY36]","protein_coding"
"At1g24610","No alias","Arabidopsis thaliana","F21J9.27 [Source:UniProtKB/TrEMBL;Acc:Q9FYK3]","protein_coding"
"At1g24764","No alias","Arabidopsis thaliana","microtubule-associated proteins 70-2 [Source:TAIR;Acc:AT1G24764]","protein_coding"
"At1g25390","No alias","Arabidopsis thaliana","LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6K9]","protein_coding"
"At1g26640","No alias","Arabidopsis thaliana","Isopentenyl phosphate kinase [Source:UniProtKB/Swiss-Prot;Acc:Q8H1F7]","protein_coding"
"At1g27450","No alias","Arabidopsis thaliana","Adenine phosphoribosyl transferase 1 [Source:UniProtKB/TrEMBL;Acc:F4HSX1]","protein_coding"
"At1g31190","No alias","Arabidopsis thaliana","Phosphatase IMPL1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94F00]","protein_coding"
"At1g35220","No alias","Arabidopsis thaliana","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 313 Blast hits to 185 proteins in  /.../cies: Archae - 0; Bacteria - 0; Metazoa - 200; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). [Source:TAIR;Acc:AT1G35220]","protein_coding"
"At1g35780","No alias","Arabidopsis thaliana","At1g35780/F14D7_9 [Source:UniProtKB/TrEMBL;Acc:Q9LP18]","protein_coding"
"At1g43560","No alias","Arabidopsis thaliana","Ty2 [Source:UniProtKB/TrEMBL;Acc:A0A178WFY2]","protein_coding"
"At1g48830","No alias","Arabidopsis thaliana","40S ribosomal protein S7 [Source:UniProtKB/TrEMBL;Acc:A0A178WGF0]","protein_coding"
"At1g48920","No alias","Arabidopsis thaliana","Nucleolin 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FVQ1]","protein_coding"
"At1g49540","No alias","Arabidopsis thaliana","Elongator protein 2 [Source:UniProtKB/TrEMBL;Acc:F4I1S8]","protein_coding"
"At1g51380","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 34 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8J1]","protein_coding"
"At1g52930","No alias","Arabidopsis thaliana","Ribosome biogenesis protein BRX1 homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C928]","protein_coding"
"At1g54220","No alias","Arabidopsis thaliana","Acetyltransferase component of pyruvate dehydrogenase complex [Source:UniProtKB/TrEMBL;Acc:A0A178W5Y1]","protein_coding"
"At1g54690","No alias","Arabidopsis thaliana","Probable histone H2AXb [Source:UniProtKB/Swiss-Prot;Acc:Q9S9K7]","protein_coding"
"At1g54820","No alias","Arabidopsis thaliana","Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HYK7]","protein_coding"
"At1g56110","No alias","Arabidopsis thaliana","At1g56110/T6H22_9 [Source:UniProtKB/TrEMBL;Acc:Q9SGT7]","protein_coding"
"At1g63660","No alias","Arabidopsis thaliana","At1g63660 [Source:UniProtKB/TrEMBL;Acc:Q9CAD1]","protein_coding"
"At1g63810","No alias","Arabidopsis thaliana","Nucleolar protein [Source:UniProtKB/TrEMBL;Acc:Q0WVM5]","protein_coding"
"At1g66670","No alias","Arabidopsis thaliana","ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SXJ6]","protein_coding"
"At1g67280","No alias","Arabidopsis thaliana","Probable lactoylglutathione lyase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8W593]","protein_coding"
"At1g67320","No alias","Arabidopsis thaliana","DNA primase large subunit [Source:UniProtKB/TrEMBL;Acc:F4HRU9]","protein_coding"
"At1g67720","No alias","Arabidopsis thaliana","Probable LRR receptor-like serine/threonine-protein kinase At1g67720 [Source:UniProtKB/Swiss-Prot;Acc:C0LGI2]","protein_coding"
"At1g69935","No alias","Arabidopsis thaliana","Protein SHORT HYPOCOTYL IN WHITE LIGHT 1 [Source:UniProtKB/Swiss-Prot;Acc:F4I3V6]","protein_coding"
"At1g72040","No alias","Arabidopsis thaliana","At1g72040 [Source:UniProtKB/TrEMBL;Acc:Q501D4]","protein_coding"
"At1g74640","No alias","Arabidopsis thaliana","Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8L475]","protein_coding"
"At1g75900","No alias","Arabidopsis thaliana","GDSL esterase/lipase EXL3 [Source:UniProtKB/Swiss-Prot;Acc:Q94CH6]","protein_coding"
"At1g77470","No alias","Arabidopsis thaliana","Replication factor C subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAQ8]","protein_coding"
"At1g78210","No alias","Arabidopsis thaliana","Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8RXC1]","protein_coding"
"At1g78600","No alias","Arabidopsis thaliana","Light-regulated zinc finger protein 1 [Source:UniProtKB/TrEMBL;Acc:F4IBS4]","protein_coding"
"At1g80290","No alias","Arabidopsis thaliana","Nucleotide-diphospho-sugar transferases superfamily protein [Source:TAIR;Acc:AT1G80290]","protein_coding"
"At2g05160","No alias","Arabidopsis thaliana","Zinc finger CCCH domain-containing protein 18 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ41]","protein_coding"
"At2g15690","No alias","Arabidopsis thaliana","Pentatricopeptide repeat-containing protein At2g15690, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQE5]","protein_coding"
"At2g16440","No alias","Arabidopsis thaliana","DNA replication licensing factor MCM4 [Source:UniProtKB/Swiss-Prot;Acc:Q0WVF5]","protein_coding"
"At2g17630","No alias","Arabidopsis thaliana","Phosphoserine aminotransferase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SHP0]","protein_coding"
"At2g19470","No alias","Arabidopsis thaliana","Casein kinase 1-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUP4]","protein_coding"
"At2g19540","No alias","Arabidopsis thaliana","Putative WD-40 repeat protein [Source:UniProtKB/TrEMBL;Acc:Q9ZUN8]","protein_coding"
"At2g19670","No alias","Arabidopsis thaliana","Probable protein arginine N-methyltransferase 1.2 [Source:UniProtKB/Swiss-Prot;Acc:O82210]","protein_coding"
"At2g20490","No alias","Arabidopsis thaliana","H/ACA ribonucleoprotein complex subunit 3-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q93XX8]","protein_coding"
"At2g21790","No alias","Arabidopsis thaliana","Ribonucleoside-diphosphate reductase large subunit [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ20]","protein_coding"
"At2g21860","No alias","Arabidopsis thaliana","At2g21860/F7D8.18 [Source:UniProtKB/TrEMBL;Acc:Q9SJ13]","protein_coding"
"At2g22660","No alias","Arabidopsis thaliana","Glycine-rich domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQ47]","protein_coding"
"At2g23840","No alias","Arabidopsis thaliana","At2g23840 [Source:UniProtKB/TrEMBL;Acc:Q6NMJ9]","protein_coding"
"At2g24490","No alias","Arabidopsis thaliana","RPA32A [Source:UniProtKB/TrEMBL;Acc:A0A178VTA7]","protein_coding"
"At2g25850","No alias","Arabidopsis thaliana","PAPS2 [Source:UniProtKB/TrEMBL;Acc:A0A178VXR1]","protein_coding"
"At2g29570","No alias","Arabidopsis thaliana","Proliferating cell nuclear antigen 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW35]","protein_coding"
"At2g31530","No alias","Arabidopsis thaliana","Preprotein translocase subunit SCY2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4IQV7]","protein_coding"
"At2g32060","No alias","Arabidopsis thaliana","40S ribosomal protein S12 [Source:UniProtKB/TrEMBL;Acc:A0A178VU31]","protein_coding"
"At2g34260","No alias","Arabidopsis thaliana","WD repeat-containing protein 55 [Source:UniProtKB/Swiss-Prot;Acc:O80775]","protein_coding"
"At2g37500","No alias","Arabidopsis thaliana","Arginine biosynthesis bifunctional protein ArgJ, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A178VUS6]","protein_coding"
"At2g40435","No alias","Arabidopsis thaliana","Transcription factor SCREAM-like protein [Source:UniProtKB/TrEMBL;Acc:Q8RUZ5]","protein_coding"
"At2g40550","No alias","Arabidopsis thaliana","Mini-chromosome maintenance complex-binding protein [Source:UniProtKB/Swiss-Prot;Acc:Q501D5]","protein_coding"
"At2g41950","No alias","Arabidopsis thaliana","At2g41950/T6D20.26 [Source:UniProtKB/TrEMBL;Acc:O23684]","protein_coding"
"At2g45850","No alias","Arabidopsis thaliana","AT-hook motif nuclear-localized protein 9 [Source:UniProtKB/Swiss-Prot;Acc:O80834]","protein_coding"
"At2g46110","No alias","Arabidopsis thaliana","3-methyl-2-oxobutanoate hydroxymethyltransferase 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O82357]","protein_coding"
"At2g46170","No alias","Arabidopsis thaliana","Reticulon-like protein B5 [Source:UniProtKB/Swiss-Prot;Acc:O82352]","protein_coding"
"At2g46370","No alias","Arabidopsis thaliana","Auxin-responsive GH3 family protein [Source:UniProtKB/TrEMBL;Acc:F4II77]","protein_coding"
"At2g46870","No alias","Arabidopsis thaliana","B3 domain-containing transcription factor NGA1 [Source:UniProtKB/Swiss-Prot;Acc:O82799]","protein_coding"
"At2g47240","No alias","Arabidopsis thaliana","Long chain acyl-CoA synthetase 1 [Source:UniProtKB/Swiss-Prot;Acc:O22898]","protein_coding"
"At2g47590","No alias","Arabidopsis thaliana","At2g47590 [Source:UniProtKB/TrEMBL;Acc:Q058P5]","protein_coding"
"At3g01440","No alias","Arabidopsis thaliana","Photosynthetic NDH subunit of lumenal location 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SGH4]","protein_coding"
"At3g02820","No alias","Arabidopsis thaliana","Zinc knuckle (CCHC-type) family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LR82]","protein_coding"
"At3g02900","No alias","Arabidopsis thaliana","Low-density receptor-like protein [Source:UniProtKB/TrEMBL;Acc:F4IYH7]","protein_coding"
"At3g03250","No alias","Arabidopsis thaliana","UTP--glucose-1-phosphate uridylyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A1I9LT02]","protein_coding"
"At3g03920","No alias","Arabidopsis thaliana","Putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZT0]","protein_coding"
"At3g03960","No alias","Arabidopsis thaliana","T-complex protein 1 subunit theta [Source:UniProtKB/Swiss-Prot;Acc:Q94K05]","protein_coding"
"At3g03980","No alias","Arabidopsis thaliana","NADPH-dependent aldehyde reductase-like protein, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SQR4]","protein_coding"
"At3g05030","No alias","Arabidopsis thaliana","Sodium/hydrogen exchanger [Source:UniProtKB/TrEMBL;Acc:A0A178VK10]","protein_coding"
"At3g06530","No alias","Arabidopsis thaliana","ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LP28]","protein_coding"
"At3g06580","No alias","Arabidopsis thaliana","Galactokinase [Source:UniProtKB/Swiss-Prot;Acc:Q9SEE5]","protein_coding"
"At3g07390","No alias","Arabidopsis thaliana","AIR12 [Source:UniProtKB/TrEMBL;Acc:A0A178VEI7]","protein_coding"
"At3g07770","No alias","Arabidopsis thaliana","Heat shock protein 90-6, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:F4JFN3]","protein_coding"
"At3g09720","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 57 [Source:UniProtKB/Swiss-Prot;Acc:Q84TG1]","protein_coding"
"At3g09820","No alias","Arabidopsis thaliana","Adenosine kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SF85]","protein_coding"
"At3g10530","No alias","Arabidopsis thaliana","F18K10.11 protein [Source:UniProtKB/TrEMBL;Acc:Q9LPP3]","protein_coding"
"At3g10610","No alias","Arabidopsis thaliana","40S ribosomal protein S17-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SQZ1]","protein_coding"
"At3g10840","No alias","Arabidopsis thaliana","Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:A4IJ41]","protein_coding"
"At3g11710","No alias","Arabidopsis thaliana","Lysine--tRNA ligase [Source:UniProtKB/TrEMBL;Acc:A0A178VAG3]","protein_coding"
"At3g11964","No alias","Arabidopsis thaliana","rRNA biogenesis protein RRP5 [Source:UniProtKB/Swiss-Prot;Acc:F4J8K6]","protein_coding"
"At3g13230","No alias","Arabidopsis thaliana","At3g13230 [Source:UniProtKB/TrEMBL;Acc:Q9LTU6]","protein_coding"
"At3g13560","No alias","Arabidopsis thaliana","Glucan endo-1,3-beta-glucosidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q94CD8]","protein_coding"
"At3g15080","No alias","Arabidopsis thaliana","At3g15080 [Source:UniProtKB/TrEMBL;Acc:Q8LAA0]","protein_coding"
"At3g16250","No alias","Arabidopsis thaliana","Photosynthetic NDH subunit of subcomplex B 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LU21]","protein_coding"
"At3g17240","No alias","Arabidopsis thaliana","Dihydrolipoyl dehydrogenase 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9M5K2]","protein_coding"
"At3g18600","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 51 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIH9]","protein_coding"
"At3g18990","No alias","Arabidopsis thaliana","AP2/B3-like transcriptional factor family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQ83]","protein_coding"
"At3g21540","No alias","Arabidopsis thaliana","Transducin family protein / WD-40 repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9LVF2]","protein_coding"
"At3g21790","No alias","Arabidopsis thaliana","Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178VG15]","protein_coding"
"At3g22370","No alias","Arabidopsis thaliana","Ubiquinol oxidase 1a, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q39219]","protein_coding"
"At3g25110","No alias","Arabidopsis thaliana","Oleoyl-acyl carrier protein thioesterase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q42561]","protein_coding"
"At3g25130","No alias","Arabidopsis thaliana","Acidic leucine-rich nuclear phosphoprotein 32 family B protein [Source:UniProtKB/TrEMBL;Acc:Q9LSG4]","protein_coding"
"At3g25230","No alias","Arabidopsis thaliana","Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:B3H746]","protein_coding"
"At3g26060","No alias","Arabidopsis thaliana","Thioredoxin superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JBC9]","protein_coding"
"At3g27360","No alias","Arabidopsis thaliana","Histone H3 [Source:UniProtKB/TrEMBL;Acc:A0A178WG20]","protein_coding"
"At3g27380","No alias","Arabidopsis thaliana","Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8LBZ7]","protein_coding"
"At3g27930","No alias","Arabidopsis thaliana","AT3g27930/K24A2_2 [Source:UniProtKB/TrEMBL;Acc:Q8W106]","protein_coding"
"At3g42660","No alias","Arabidopsis thaliana","Transducin family protein / WD-40 repeat family protein [Source:UniProtKB/TrEMBL;Acc:F4JF14]","protein_coding"
"At3g44750","No alias","Arabidopsis thaliana","Histone deacetylase HDT1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FVE6]","protein_coding"
"At3g44990","No alias","Arabidopsis thaliana","Xyloglucan endotransglucosylase/hydrolase protein 31 [Source:UniProtKB/Swiss-Prot;Acc:P93046]","protein_coding"
"At3g46940","No alias","Arabidopsis thaliana","dUTP-PYROPHOSPHATASE-LIKE 1 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LM85]","protein_coding"
"At3g49530","No alias","Arabidopsis thaliana","NAC domain-containing protein 62 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCK6]","protein_coding"
"At3g49680","No alias","Arabidopsis thaliana","Branched-chain-amino-acid aminotransferase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M401]","protein_coding"
"At3g55280","No alias","Arabidopsis thaliana","60S ribosomal protein L23a-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M3C3]","protein_coding"
"At3g55510","No alias","Arabidopsis thaliana","Noc2p family [Source:UniProtKB/TrEMBL;Acc:Q0WVH0]","protein_coding"
"At3g56070","No alias","Arabidopsis thaliana","Peptidyl-prolyl cis-trans isomerase CYP19-3 [Source:UniProtKB/Swiss-Prot;Acc:Q38867]","protein_coding"
"At3g60750","No alias","Arabidopsis thaliana","Transketolase-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8RWV0]","protein_coding"
"At3g61150","No alias","Arabidopsis thaliana","HDG1 [Source:UniProtKB/TrEMBL;Acc:A0A178V5Q4]","protein_coding"
"At3g61820","No alias","Arabidopsis thaliana","Eukaryotic aspartyl protease family protein [Source:UniProtKB/TrEMBL;Acc:Q9M356]","protein_coding"
"At3g62410","No alias","Arabidopsis thaliana","Calvin cycle protein CP12-2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LZP9]","protein_coding"
"At4g02610","No alias","Arabidopsis thaliana","Tryptophan synthase alpha chain [Source:UniProtKB/Swiss-Prot;Acc:O22765]","protein_coding"
"At4g03020","No alias","Arabidopsis thaliana","Putative WD-repeat protein [Source:UniProtKB/TrEMBL;Acc:Q8LPI5]","protein_coding"
"At4g05410","No alias","Arabidopsis thaliana","U3 snoRNP-associated protein-like YAO [Source:UniProtKB/Swiss-Prot;Acc:Q9M0V4]","protein_coding"
"At4g16880","No alias","Arabidopsis thaliana","Leucine-rich repeat (LRR) family protein [Source:UniProtKB/TrEMBL;Acc:F4JNB0]","protein_coding"
"At4g17430","No alias","Arabidopsis thaliana","O-fucosyltransferase 30 [Source:UniProtKB/Swiss-Prot;Acc:Q1JPM5]","protein_coding"
"At4g18280","No alias","Arabidopsis thaliana","Glycine-rich cell wall protein-like protein [Source:UniProtKB/TrEMBL;Acc:F4JQT4]","protein_coding"
"At4g18390","No alias","Arabidopsis thaliana","Transcription factor TCP2 [Source:UniProtKB/Swiss-Prot;Acc:Q93V43]","protein_coding"
"At4g23670","No alias","Arabidopsis thaliana","AT4G23670 protein [Source:UniProtKB/TrEMBL;Acc:Q9SUR0]","protein_coding"
"At4g25340","No alias","Arabidopsis thaliana","Peptidyl-prolyl cis-trans isomerase FKBP53 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZG9]","protein_coding"
"At4g25630","No alias","Arabidopsis thaliana","Mediator of RNA polymerase II transcription subunit 36a [Source:UniProtKB/Swiss-Prot;Acc:Q94AH9]","protein_coding"
"At4g25880","No alias","Arabidopsis thaliana","pumilio 6 [Source:TAIR;Acc:AT4G25880]","protein_coding"
"At4g28220","No alias","Arabidopsis thaliana","External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q1JPL4]","protein_coding"
"At4g29510","No alias","Arabidopsis thaliana","Protein arginine N-methyltransferase 1.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU94]","protein_coding"
"At4g33550","No alias","Arabidopsis thaliana","At4g33550 [Source:UniProtKB/TrEMBL;Acc:Q6NLG8]","protein_coding"
"At4g36250","No alias","Arabidopsis thaliana","Aldehyde dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178UZB9]","protein_coding"
"At4g38100","No alias","Arabidopsis thaliana","Protein CURVATURE THYLAKOID 1D, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LDD3]","protein_coding"
"At4g38890","No alias","Arabidopsis thaliana","tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like [Source:UniProtKB/Swiss-Prot;Acc:Q9T0J6]","protein_coding"
"At5g02430","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LZ59]","protein_coding"
"At5g02710","No alias","Arabidopsis thaliana","At5g02710 [Source:UniProtKB/TrEMBL;Acc:Q9LZ14]","protein_coding"
"At5g02810","No alias","Arabidopsis thaliana","Two-component response regulator-like APRR7 [Source:UniProtKB/Swiss-Prot;Acc:Q93WK5]","protein_coding"
"At5g02820","No alias","Arabidopsis thaliana","DNA topoisomerase 6 subunit A [Source:UniProtKB/TrEMBL;Acc:A0A178UQD3]","protein_coding"
"At5g03340","No alias","Arabidopsis thaliana","Cell division control protein 48 homolog E [Source:UniProtKB/Swiss-Prot;Acc:Q9LZF6]","protein_coding"
"At5g03430","No alias","Arabidopsis thaliana","Phosphoadenosine phosphosulfate (PAPS) reductase family protein [Source:UniProtKB/TrEMBL;Acc:Q9LZE4]","protein_coding"
"At5g03650","No alias","Arabidopsis thaliana","1,4-alpha-glucan-branching enzyme 2-2, chloroplastic/amyloplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LZS3]","protein_coding"
"At5g04710","No alias","Arabidopsis thaliana","Aspartyl aminopeptidase [Source:UniProtKB/TrEMBL;Acc:Q9LZ26]","protein_coding"
"At5g06000","No alias","Arabidopsis thaliana","Eukaryotic translation initiation factor 3 subunit G [Source:UniProtKB/TrEMBL;Acc:Q9FI86]","protein_coding"
"At5g06360","No alias","Arabidopsis thaliana","Ribosomal protein S8e family protein [Source:UniProtKB/TrEMBL;Acc:Q9FNH2]","protein_coding"
"At5g07860","No alias","Arabidopsis thaliana","HXXXD-type acyl-transferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SD98]","protein_coding"
"At5g09450","No alias","Arabidopsis thaliana","Pentatricopeptide repeat-containing protein At5g09450, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q94B59]","protein_coding"
"At5g09810","No alias","Arabidopsis thaliana","AtACT7 [Source:UniProtKB/TrEMBL;Acc:A0A178UEW4]","protein_coding"
"At5g10920","No alias","Arabidopsis thaliana","Argininosuccinate lyase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LEU8]","protein_coding"
"At5g11240","No alias","Arabidopsis thaliana","At5g11240 [Source:UniProtKB/TrEMBL;Acc:B5X503]","protein_coding"
"At5g14050","No alias","Arabidopsis thaliana","U3 small nucleolar RNA-associated protein 18 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9FMU5]","protein_coding"
"At5g15160","No alias","Arabidopsis thaliana","Transcription factor PRE2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXG5]","protein_coding"
"At5g15750","No alias","Arabidopsis thaliana","Alpha-L RNA-binding motif/Ribosomal protein S4 family protein [Source:UniProtKB/TrEMBL;Acc:Q683D4]","protein_coding"
"At5g15980","No alias","Arabidopsis thaliana","Pentatricopeptide repeat-containing protein At5g15980, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8LPF1]","protein_coding"
"At5g16140","No alias","Arabidopsis thaliana","Chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LF14]","protein_coding"
"At5g18440","No alias","Arabidopsis thaliana","NUFIP [Source:UniProtKB/TrEMBL;Acc:A0A178UB40]","protein_coding"
"At5g18760","No alias","Arabidopsis thaliana","At5g18760 [Source:UniProtKB/TrEMBL;Acc:Q1H5A5]","protein_coding"
"At5g20740","No alias","Arabidopsis thaliana","Plant invertase/pectin methylesterase inhibitor superfamily protein [Source:TAIR;Acc:AT5G20740]","protein_coding"
"At5g20935","No alias","Arabidopsis thaliana","unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3148 (InterPro:IPR021495); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Ot /.../karyotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT5G20935]","protein_coding"
"At5g27330","No alias","Arabidopsis thaliana","Prefoldin chaperone subunit family protein [Source:UniProtKB/TrEMBL;Acc:F4K498]","protein_coding"
"At5g39550","No alias","Arabidopsis thaliana","E3 ubiquitin-protein ligase ORTHRUS 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKA7]","protein_coding"
"At5g40500","No alias","Arabidopsis thaliana","Uncharacterized protein At5g40500 [Source:UniProtKB/TrEMBL;Acc:Q8VZ30]","protein_coding"
"At5g43060","No alias","Arabidopsis thaliana","Probable cysteine protease RD21B [Source:UniProtKB/Swiss-Prot;Acc:Q9FMH8]","protein_coding"
"At5g43830","No alias","Arabidopsis thaliana","Aluminum induced protein with YGL and LRDR motifs [Source:UniProtKB/TrEMBL;Acc:Q9FG81]","protein_coding"
"At5g45800","No alias","Arabidopsis thaliana","MEE62 [Source:UniProtKB/TrEMBL;Acc:A0A178UKF2]","protein_coding"
"At5g46570","No alias","Arabidopsis thaliana","Serine/threonine-protein kinase BSK2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LS26]","protein_coding"
"At5g47070","No alias","Arabidopsis thaliana","Probable serine/threonine-protein kinase PBL19 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTC0]","protein_coding"
"At5g49330","No alias","Arabidopsis thaliana","Transcription factor MYB111 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ07]","protein_coding"
"At5g50580","No alias","Arabidopsis thaliana","SUMO-activating enzyme subunit 1B-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DI12]","protein_coding"
"At5g50740","No alias","Arabidopsis thaliana","Heavy metal transport/detoxification superfamily protein [Source:UniProtKB/TrEMBL;Acc:B3H4U8]","protein_coding"
"At5g51350","No alias","Arabidopsis thaliana","Leucine-rich repeat receptor-like protein kinase [Source:UniProtKB/TrEMBL;Acc:Q9FGN6]","protein_coding"
"At5g51560","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q9FHM8]","protein_coding"
"At5g54910","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 32 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFT9]","protein_coding"
"At5g56710","No alias","Arabidopsis thaliana","60S ribosomal protein L31-3 [Source:UniProtKB/Swiss-Prot;Acc:P51420]","protein_coding"
"At5g58030","No alias","Arabidopsis thaliana","At5g58030 [Source:UniProtKB/TrEMBL;Acc:Q9FGU1]","protein_coding"
"At5g58310","No alias","Arabidopsis thaliana","Methylesterase 18 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVL9]","protein_coding"
"At5g59850","No alias","Arabidopsis thaliana","AT1G07770 protein [Source:UniProtKB/TrEMBL;Acc:B9DI04]","protein_coding"
"At5g60960","No alias","Arabidopsis thaliana","PNM1 [Source:UniProtKB/TrEMBL;Acc:A0A178U8V9]","protein_coding"
"At5g62810","No alias","Arabidopsis thaliana","Peroxisomal membrane protein PEX14 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXT6]","protein_coding"
"At5g63420","No alias","Arabidopsis thaliana","Ribonuclease J [Source:UniProtKB/Swiss-Prot;Acc:Q84W56]","protein_coding"
"At5g64080","No alias","Arabidopsis thaliana","Non-specific lipid-transfer protein-like protein At5g64080 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYI9]","protein_coding"
"At5g65760","No alias","Arabidopsis thaliana","At5g65760 [Source:UniProtKB/TrEMBL;Acc:Q1JPM1]","protein_coding"
"At5g66050","No alias","Arabidopsis thaliana","Wound-responsive family protein [Source:UniProtKB/TrEMBL;Acc:Q8GWL4]","protein_coding"
"At5g66400","No alias","Arabidopsis thaliana","RAB18 [Source:UniProtKB/TrEMBL;Acc:A0A178UN24]","protein_coding"
"At5g67280","No alias","Arabidopsis thaliana","At5g67280/K3G17_4 [Source:UniProtKB/TrEMBL;Acc:Q9FGQ5]","protein_coding"
"Bradi1g07457","No alias","Brachypodium distachyon","Phototropic-responsive NPH3 family protein","protein_coding"
"Bradi1g13920","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g16082","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g24467","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g29530","No alias","Brachypodium distachyon","zinc knuckle (CCHC-type) family protein","protein_coding"
"Bradi1g32480","No alias","Brachypodium distachyon","zinc knuckle (CCHC-type) family protein","protein_coding"
"Bradi1g35577","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g35690","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g38702","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g39059","No alias","Brachypodium distachyon","plasmodesmata callose-binding protein 5","protein_coding"
"Bradi1g44245","No alias","Brachypodium distachyon","Cysteine proteinases superfamily protein","protein_coding"
"Bradi1g44282","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g45347","No alias","Brachypodium distachyon","Mitochondrial transcription termination factor family protein","protein_coding"
"Bradi1g47705","No alias","Brachypodium distachyon","BTB/POZ/MATH-domains containing protein","protein_coding"
"Bradi1g49015","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g56983","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g60990","No alias","Brachypodium distachyon","Heavy metal transport/detoxification superfamily protein","protein_coding"
"Bradi1g62652","No alias","Brachypodium distachyon","flowering promoting factor 1","protein_coding"
"Bradi1g65920","No alias","Brachypodium distachyon","elongator protein 6","protein_coding"
"Bradi1g67720","No alias","Brachypodium distachyon","Ankyrin repeat family protein","protein_coding"
"Bradi1g69150","No alias","Brachypodium distachyon","homeobox from Arabidopsis thaliana","protein_coding"
"Bradi2g01090","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi2g02440","No alias","Brachypodium distachyon","Protein kinase superfamily protein","protein_coding"
"Bradi2g03925","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi2g04729","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi2g05350","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi2g07284","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi2g16420","No alias","Brachypodium distachyon","Cytochrome b561/ferric reductase transmembrane protein family","protein_coding"
"Bradi2g26915","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi2g31150","No alias","Brachypodium distachyon","VIRB2-interacting protein 1","protein_coding"
"Bradi2g32627","No alias","Brachypodium distachyon","RING/FYVE/PHD zinc finger superfamily protein","protein_coding"
"Bradi2g35671","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi2g36250","No alias","Brachypodium distachyon","F-box/RNI-like/FBD-like domains-containing protein","protein_coding"
"Bradi2g38186","No alias","Brachypodium distachyon","casein kinase alpha 1","protein_coding"
"Bradi2g38357","No alias","Brachypodium distachyon","glycosyl hydrolase 9B12","protein_coding"
"Bradi2g42400","No alias","Brachypodium distachyon","ovate family protein 14","protein_coding"
"Bradi2g45650","No alias","Brachypodium distachyon","Polynucleotidyl transferase, ribonuclease H-like superfamily protein","protein_coding"
"Bradi2g48101","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi2g53289","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi2g55185","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi2g58340","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi2g58565","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi2g60240","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi2g60245","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g00430","No alias","Brachypodium distachyon","ENHANCED DISEASE RESISTANCE 2","protein_coding"
"Bradi3g01515","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g02220","No alias","Brachypodium distachyon","ARABIDOPSIS TRITHORAX-RELATED PROTEIN 6","protein_coding"
"Bradi3g05632","No alias","Brachypodium distachyon","Spc97 / Spc98 family of spindle pole body (SBP) component","protein_coding"
"Bradi3g06193","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g08405","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g09750","No alias","Brachypodium distachyon","Galactose oxidase/kelch repeat superfamily protein","protein_coding"
"Bradi3g10280","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g10610","No alias","Brachypodium distachyon","nucleolar essential protein-related","protein_coding"
"Bradi3g16000","No alias","Brachypodium distachyon","LRR and NB-ARC domains-containing disease resistance protein","protein_coding"
"Bradi3g18330","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g18565","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g19842","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g21468","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g22047","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g22778","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g24076","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g24826","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g28082","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g28872","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g29215","No alias","Brachypodium distachyon","photosynthetic electron transfer A","protein_coding"
"Bradi3g32267","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g34670","No alias","Brachypodium distachyon","Tesmin/TSO1-like CXC domain-containing protein","protein_coding"
"Bradi3g35840","No alias","Brachypodium distachyon","cytochrome P450, family 87, subfamily A, polypeptide 2","protein_coding"
"Bradi3g35990","No alias","Brachypodium distachyon","cytochrome P450, family 76, subfamily C, polypeptide 1","protein_coding"
"Bradi3g39392","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g42470","No alias","Brachypodium distachyon","Arabidopsis protein of unknown function (DUF241)","protein_coding"
"Bradi3g43920","No alias","Brachypodium distachyon","Plant stearoyl-acyl-carrier-protein desaturase family protein","protein_coding"
"Bradi3g43951","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g45190","No alias","Brachypodium distachyon","laccase 7","protein_coding"
"Bradi3g46595","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g48290","No alias","Brachypodium distachyon","NAD(P)-binding Rossmann-fold superfamily protein","protein_coding"
"Bradi3g50336","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g51389","No alias","Brachypodium distachyon","zinc knuckle (CCHC-type) family protein","protein_coding"
"Bradi3g52990","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g54630","No alias","Brachypodium distachyon","proliferating cell nuclear antigen 2","protein_coding"
"Bradi3g55436","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g55565","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi4g00486","No alias","Brachypodium distachyon","Thioesterase superfamily protein","protein_coding"
"Bradi4g01075","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi4g02825","No alias","Brachypodium distachyon","NB-ARC domain-containing disease resistance protein","protein_coding"
"Bradi4g14201","No alias","Brachypodium distachyon","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding"
"Bradi4g14721","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi4g16615","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi4g19043","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi4g19620","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi4g22810","No alias","Brachypodium distachyon","Disease resistance-responsive (dirigent-like protein) family protein","protein_coding"
"Bradi4g24576","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi4g24712","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi4g32787","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi4g36972","No alias","Brachypodium distachyon","SAUR-like auxin-responsive protein family","protein_coding"
"Bradi4g39766","No alias","Brachypodium distachyon","RWP-RK domain-containing protein","protein_coding"
"Bradi4g40905","No alias","Brachypodium distachyon","proliferating cellular nuclear antigen 1","protein_coding"
"Bradi4g40920","No alias","Brachypodium distachyon","proliferating cell nuclear antigen 2","protein_coding"
"Bradi4g45420","No alias","Brachypodium distachyon","proliferating cellular nuclear antigen 1","protein_coding"
"Bradi5g03522","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi5g06523","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi5g07594","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi5g13106","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi5g14390","No alias","Brachypodium distachyon","Major facilitator superfamily protein","protein_coding"
"Bradi5g16780","No alias","Brachypodium distachyon","Serine protease inhibitor (SERPIN) family protein","protein_coding"
"Bradi5g17860","No alias","Brachypodium distachyon","serine carboxypeptidase-like 19","protein_coding"
"Bradi5g17890","No alias","Brachypodium distachyon","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein","protein_coding"
"Bradi5g20230","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi5g23651","No alias","Brachypodium distachyon","cullin 3","protein_coding"
"Brara.A00216.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A00392.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A00819.1","No alias","Brassica rapa","regulatory component *(RPT2) of 26S proteasome","protein_coding"
"Brara.A00999.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A01116.1","No alias","Brassica rapa","component *(Sm-B) of U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex","protein_coding"
"Brara.A01274.1","No alias","Brassica rapa","component *(KAE1) of tRNA N6-threonylcarbamoylation KEOPS/EKC complex","protein_coding"
"Brara.A01622.1","No alias","Brassica rapa","arginine-tRNA ligase & EC_6.1 ligase forming carbon-oxygen bond","protein_coding"
"Brara.A01917.1","No alias","Brassica rapa","RopGEF guanine nucleotide exchange factor *(SPIKE)","protein_coding"
"Brara.A01990.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A02200.1","No alias","Brassica rapa","component *(uS17) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Brara.A02394.1","No alias","Brassica rapa","E2F-type transcription factor & cell cycle interphase transcription factor *(DEL)","protein_coding"
"Brara.A02431.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A02480.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A02688.1","No alias","Brassica rapa","pyruvate kinase & plastidial pyruvate kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.A02836.1","No alias","Brassica rapa","subunit alpha of CCT chaperonin folding complex *(CCT1)","protein_coding"
"Brara.A03743.1","No alias","Brassica rapa","component *(eS24) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Brara.A03871.1","No alias","Brassica rapa","component *(CTNNBL1) of MAC spliceosome-associated complex","protein_coding"
"Brara.A03880.1","No alias","Brassica rapa","component *(eS7) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Brara.B00218.1","No alias","Brassica rapa","component *(GCP3) of gamma-Tubulin ring complex","protein_coding"
"Brara.B00396.1","No alias","Brassica rapa","helicase UAP56","protein_coding"
"Brara.B00932.1","No alias","Brassica rapa","E3 ubiquitin ligase component *(NSE1) of homologous recombination repair Smc5-Smc6 complex","protein_coding"
"Brara.B01714.1","No alias","Brassica rapa","primase component *(POLA3) of DNA polymerase alpha complex","protein_coding"
"Brara.B02513.1","No alias","Brassica rapa","component *(GCP5) of gamma-Tubulin ring complex","protein_coding"
"Brara.B02883.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B03596.1","No alias","Brassica rapa","uridylate kinase *(UMK) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.B03607.1","No alias","Brassica rapa","glutamate-tRNA ligase","protein_coding"
"Brara.B03718.1","No alias","Brassica rapa","DNA bending architectural protein *(HMG-B)","protein_coding"
"Brara.C00091.1","No alias","Brassica rapa","component *(uS12) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Brara.C00706.1","No alias","Brassica rapa","subunit zeta *(CCT6) of CCT chaperonin folding complex","protein_coding"
"Brara.C01020.1","No alias","Brassica rapa","histone *(H2B)","protein_coding"
"Brara.C01220.1","No alias","Brassica rapa","histone *(H4)","protein_coding"
"Brara.C01234.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C01325.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C01530.1","No alias","Brassica rapa","Ran-activation accessory protein *(RanBP1)","protein_coding"
"Brara.C02829.1","No alias","Brassica rapa","component *(MCM7) of MCM replicative DNA helicase complex","protein_coding"
"Brara.C02927.1","No alias","Brassica rapa","component *(uL13m) of large mitoribosomal-subunit proteome","protein_coding"
"Brara.C03202.1","No alias","Brassica rapa","EC_3.2 glycosylase","protein_coding"
"Brara.C03424.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C04051.1","No alias","Brassica rapa","component *(MCM5) of MCM replicative DNA helicase complex","protein_coding"
"Brara.C04147.1","No alias","Brassica rapa","component *(MCM4) of MCM replicative DNA helicase complex","protein_coding"
"Brara.D00054.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.D00144.1","No alias","Brassica rapa","cofactor of post-CCT Tubulin folding pathway *(TFC-D)","protein_coding"
"Brara.D00485.1","No alias","Brassica rapa","CDKB protein kinase & catalytic component *(CDKB) of cyclin-dependent kinase complex & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.D00516.1","No alias","Brassica rapa","histone *(H2B)","protein_coding"
"Brara.D00562.1","No alias","Brassica rapa","fructose-bisphosphate aldolase *(FBA) & cytosolic fructose-bisphosphate aldolase & EC_4.1 carbon-carbon lyase","protein_coding"
"Brara.D00977.1","No alias","Brassica rapa","component *(mL53) of large mitoribosomal-subunit proteome","protein_coding"
"Brara.D01100.1","No alias","Brassica rapa","mitotic-specific Kleisin-type component *(SCC1) of cohesin regulator complex","protein_coding"
"Brara.D01212.1","No alias","Brassica rapa","primase component *(POLA4) of DNA polymerase alpha complex","protein_coding"
"Brara.D01721.1","No alias","Brassica rapa","histone *(H4)","protein_coding"
"Brara.D02166.1","No alias","Brassica rapa","assembly factor (TMEM70) in ATP synthase assembly","protein_coding"
"Brara.D02317.1","No alias","Brassica rapa","hydroxyalkyl alpha-pyrone synthase *(PKS) & EC_2.3 acyltransferase","protein_coding"
"Brara.D02735.1","No alias","Brassica rapa","LRR-IV protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.E00273.1","No alias","Brassica rapa","regulatory protein *(OSD1/UVI4) of ubiquitination","protein_coding"
"Brara.E01218.1","No alias","Brassica rapa","aminoacyl-tRNA binding factor *(eEF1A))","protein_coding"
"Brara.E01246.1","No alias","Brassica rapa","helicase auxiliary factor *(CDT1)","protein_coding"
"Brara.E01344.1","No alias","Brassica rapa","sliding clamp protein *(PCNA)","protein_coding"
"Brara.E01685.1","No alias","Brassica rapa","alpha-Tubulin component *(TUA) of alpha-beta-Tubulin heterodimer","protein_coding"
"Brara.E01946.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E02334.1","No alias","Brassica rapa","regulatory protein *(NCL) of rRNA transcription","protein_coding"
"Brara.E02380.1","No alias","Brassica rapa","component *(RACK1) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Brara.E02452.1","No alias","Brassica rapa","nucleocytoplasmic transport karyopherin *(PLANTKAP)","protein_coding"
"Brara.E03418.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E03557.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F00115.1","No alias","Brassica rapa","UDP-L-rhamnose synthase *(RHM)","protein_coding"
"Brara.F00331.1","No alias","Brassica rapa","alpha-Tubulin component *(TUA) of alpha-beta-Tubulin heterodimer","protein_coding"
"Brara.F00511.1","No alias","Brassica rapa","catalytic component *(POL2/POLE1) of DNA polymerase epsilon complex","protein_coding"
"Brara.F00611.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F00763.1","No alias","Brassica rapa","DNA chromomethylase *(CMT)","protein_coding"
"Brara.F00884.1","No alias","Brassica rapa","pyrophosphate-dependent phosphofructokinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.F01071.1","No alias","Brassica rapa","regulatory protein *(CYCA) of cell cycle","protein_coding"
"Brara.F01497.1","No alias","Brassica rapa","EC_2.7 transferase transferring phosphorus-containing group & pyrophosphate-dependent phosphofructokinase","protein_coding"
"Brara.F01698.1","No alias","Brassica rapa","component *(APC8) of (APC/C)-dependent ubiquitination arc lamp subcomplex","protein_coding"
"Brara.F01757.1","No alias","Brassica rapa","component *(CAP-E2/SMC2) of condensin I/II complex","protein_coding"
"Brara.F01818.1","No alias","Brassica rapa","component *(RRP46) of exosome EXO9 core complex","protein_coding"
"Brara.F01828.1","No alias","Brassica rapa","histone *(H4)","protein_coding"
"Brara.F02049.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F02241.1","No alias","Brassica rapa","chromatin architectural modulator *(DEK)","protein_coding"
"Brara.F02517.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F03113.1","No alias","Brassica rapa","component *(CAP-C/SMC4) of condensin I/II complex","protein_coding"
"Brara.F03311.1","No alias","Brassica rapa","dihydrolipoamide acetyltransferase component of plastidial pyruvate dehydrogenase complex & EC_2.3 acyltransferase","protein_coding"
"Brara.F03628.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F03629.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F03728.1","No alias","Brassica rapa","component *(MCM6) of MCM replicative DNA helicase complex","protein_coding"
"Brara.G00458.1","No alias","Brassica rapa","enoyl-ACP reductase","protein_coding"
"Brara.G00463.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G00538.1","No alias","Brassica rapa","component *(eL42) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Brara.G00603.1","No alias","Brassica rapa","small subunit of ribonucleoside-diphosphate reductase heterodimer","protein_coding"
"Brara.G00706.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G00919.1","No alias","Brassica rapa","poly-P/G elongation factor *(eEF5/eIF5A))","protein_coding"
"Brara.G01198.1","No alias","Brassica rapa","catalytic component *(POLA1) of DNA polymerase alpha complex","protein_coding"
"Brara.G01608.1","No alias","Brassica rapa","component *(eL36) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Brara.G01636.1","No alias","Brassica rapa","histone *(H2A)","protein_coding"
"Brara.G02076.1","No alias","Brassica rapa","glyceraldehyde 3-phosphate dehydrogenase & EC_1.2 oxidoreductase acting on aldehyde or oxo group of donor","protein_coding"
"Brara.G02465.1","No alias","Brassica rapa","component *(uL16) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Brara.G03032.1","No alias","Brassica rapa","UDP-glucose glycoprotein glucosyltransferase *(UGGT)","protein_coding"
"Brara.G03137.1","No alias","Brassica rapa","tRNA export karyopherin *(XPOT) & nucleocytoplasmic export karyopherin *(XPO3/XPOT)","protein_coding"
"Brara.G03422.1","No alias","Brassica rapa","substrate adaptor *(DWA2) of CUL4-DDB1 E3 ubiquitin ligase complex","protein_coding"
"Brara.H00023.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H00205.1","No alias","Brassica rapa","mannan synthesis accessory protein *(MSR)","protein_coding"
"Brara.H00398.1","No alias","Brassica rapa","amino acid transporter *(LHT)","protein_coding"
"Brara.H00423.1","No alias","Brassica rapa","regulatory protein *(CYCA) of cell cycle","protein_coding"
"Brara.H00452.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H00840.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H01488.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H01794.1","No alias","Brassica rapa","subunit alpha of coat protein complex","protein_coding"
"Brara.H01948.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H03058.1","No alias","Brassica rapa","component *(uS19) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Brara.I00125.1","No alias","Brassica rapa","component *(MCM7) of MCM replicative DNA helicase complex","protein_coding"
"Brara.I00180.1","No alias","Brassica rapa","regulatory protein *(MAS2) of rDNA transcription","protein_coding"
"Brara.I00505.1","No alias","Brassica rapa","uridylate kinase *(UMK) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.I00644.1","No alias","Brassica rapa","component *(RPA1) of single-stranded-DNA binding RPA complex & component *(RPA1) of RPA presynaptic filament assembly factor complex","protein_coding"
"Brara.I00815.1","No alias","Brassica rapa","histone *(H3)","protein_coding"
"Brara.I00886.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I00925.1","No alias","Brassica rapa","prolyl hydroxylase","protein_coding"
"Brara.I01133.1","No alias","Brassica rapa","component *(eL28) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Brara.I01216.1","No alias","Brassica rapa","component *(RFC2) of PCNA sliding clamp loader complex","protein_coding"
"Brara.I01274.1","No alias","Brassica rapa","ER-tubule curvature-inducing protein *(Reticulon)","protein_coding"
"Brara.I01380.1","No alias","Brassica rapa","SSU processome assembly factor *(IMP4)","protein_coding"
"Brara.I01421.1","No alias","Brassica rapa","component *(Tim9) of inner mitochondrion membrane TIM22 insertion system","protein_coding"
"Brara.I01925.1","No alias","Brassica rapa","ketoacyl-ACP synthase I","protein_coding"
"Brara.I02248.1","No alias","Brassica rapa","component *(ORC1) of origin recognition complex","protein_coding"
"Brara.I02406.1","No alias","Brassica rapa","plastidial ascorbate peroxidase *(APX) & EC_1.11 oxidoreductase acting on peroxide as acceptor","protein_coding"
"Brara.I02419.1","No alias","Brassica rapa","dihydrolipoamide acetyltransferase component of plastidial pyruvate dehydrogenase complex & EC_2.3 acyltransferase","protein_coding"
"Brara.I02667.1","No alias","Brassica rapa","bifunctional phosphoribosyl-ATP diphosphatase and phosphoribosyl-AMP cyclohydrolase & EC_3.6 hydrolase acting on acid anhydride","protein_coding"
"Brara.I03015.1","No alias","Brassica rapa","adenine phosphoribosyltransferase *(APT) & EC_2.4 glycosyltransferase","protein_coding"
"Brara.I03043.1","No alias","Brassica rapa","subunit epsilon *(CCT5) of CCT chaperonin folding complex","protein_coding"
"Brara.I03592.1","No alias","Brassica rapa","fructose-bisphosphate aldolase *(FBA) & cytosolic fructose-bisphosphate aldolase & EC_4.1 carbon-carbon lyase","protein_coding"
"Brara.I04203.1","No alias","Brassica rapa","component *(eS27) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Brara.I04310.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I04553.1","No alias","Brassica rapa","DNA methyltransferase *(MET)","protein_coding"
"Brara.I05035.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I05365.1","No alias","Brassica rapa","sliding clamp protein *(PCNA)","protein_coding"
"Brara.J00177.1","No alias","Brassica rapa","component *(RRP4) of exosome EXO9 core complex","protein_coding"
"Brara.J00285.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J00584.1","No alias","Brassica rapa","component *(MCM2) of MCM replicative DNA helicase complex","protein_coding"
"Brara.J00592.1","No alias","Brassica rapa","beta-galactosidase *(BGAL1) & EC_3.2 glycosylase","protein_coding"
"Brara.J01458.1","No alias","Brassica rapa","HD2-type histone deacetylase *(HD2/HDT)","protein_coding"
"Brara.J01652.1","No alias","Brassica rapa","Ran-activating protein of nucleocytoplasmic transport","protein_coding"
"Brara.J02058.1","No alias","Brassica rapa","subunit alpha of NAC ribosome-associated chaperone complex","protein_coding"
"Brara.J02124.1","No alias","Brassica rapa","5-formyl-THF cycloligase & EC_6.3 ligase forming carbon-nitrogen bond","protein_coding"
"Brara.J02545.1","No alias","Brassica rapa","mTERF-type transcription factor","protein_coding"
"Brara.J02921.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.K00109.1","No alias","Brassica rapa","Golgi-ER retrograde trafficking cargo receptor *(PDI-C)","protein_coding"
"Brara.K00720.1","No alias","Brassica rapa","mannan O-acetyltransferase *(MOAT)","protein_coding"
"Brara.K01475.1","No alias","Brassica rapa","subunit gamma of co-translational insertion system Sec61 subcomplex","protein_coding"
"Brara.K01752.1","No alias","Brassica rapa","component *(RPA1) of single-stranded-DNA binding RPA complex & component *(RPA1) of RPA presynaptic filament assembly factor complex","protein_coding"
"Brara.K01859.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Cre01.g012100","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre01.g015250","No alias","Chlamydomonas reinhardtii","DNA binding;nucleotide binding;nucleic acid binding;DNA-directed DNA polymerases;DNA-directed DNA polymerases","protein_coding"
"Cre01.g017100","No alias","Chlamydomonas reinhardtii","Esterase/lipase/thioesterase family protein","protein_coding"
"Cre01.g017450","No alias","Chlamydomonas reinhardtii","DNA polymerase alpha 2","protein_coding"
"Cre01.g018600","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre01.g019150","No alias","Chlamydomonas reinhardtii","GAMMA-TUBULIN COMPLEX PROTEIN 4","protein_coding"
"Cre01.g019450","No alias","Chlamydomonas reinhardtii","sumo conjugation enzyme 1","protein_coding"
"Cre01.g022000","No alias","Chlamydomonas reinhardtii","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Cre01.g022550","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre01.g023450","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre01.g029100","No alias","Chlamydomonas reinhardtii","PSF2","protein_coding"
"Cre01.g034750","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre01.g036050","No alias","Chlamydomonas reinhardtii","MUTL-homologue 1","protein_coding"
"Cre01.g036100","No alias","Chlamydomonas reinhardtii","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"Cre01.g044750","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre01.g048200","No alias","Chlamydomonas reinhardtii","RNA helicase, putative","protein_coding"
"Cre01.g051850","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre01.g055436","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g079926","No alias","Chlamydomonas reinhardtii","Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein","protein_coding"
"Cre02.g090350","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g094050","No alias","Chlamydomonas reinhardtii","Alkaline-phosphatase-like family protein","protein_coding"
"Cre02.g095050","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g100000","No alias","Chlamydomonas reinhardtii","Replication protein A, subunit RPA32","protein_coding"
"Cre02.g104951","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g108000","No alias","Chlamydomonas reinhardtii","Protein kinase superfamily protein","protein_coding"
"Cre02.g108150","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g118600","No alias","Chlamydomonas reinhardtii","homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1","protein_coding"
"Cre02.g118900","No alias","Chlamydomonas reinhardtii","Metal-dependent protein hydrolase","protein_coding"
"Cre02.g119800","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g142186","No alias","Chlamydomonas reinhardtii","Tubulin/FtsZ family protein","protein_coding"
"Cre03.g145687","No alias","Chlamydomonas reinhardtii","5\'-3\' exonuclease family protein","protein_coding"
"Cre03.g158300","No alias","Chlamydomonas reinhardtii","Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain","protein_coding"
"Cre03.g158550","No alias","Chlamydomonas reinhardtii","chromatin remodeling factor CHD3 (PICKLE)","protein_coding"
"Cre03.g161050","No alias","Chlamydomonas reinhardtii","partner of SLD five 1","protein_coding"
"Cre03.g161150","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g163850","No alias","Chlamydomonas reinhardtii","Zinc finger (C3HC4-type RING finger) family protein","protein_coding"
"Cre03.g178650","No alias","Chlamydomonas reinhardtii","minichromosome maintenance (MCM2/3/5) family protein","protein_coding"
"Cre03.g179961","No alias","Chlamydomonas reinhardtii","DNA polymerase epsilon catalytic subunit","protein_coding"
"Cre03.g180017","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g180050","No alias","Chlamydomonas reinhardtii","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"Cre03.g180350","No alias","Chlamydomonas reinhardtii","cyclin-dependent kinase-subunit 1","protein_coding"
"Cre03.g181450","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g184500","No alias","Chlamydomonas reinhardtii","Chaperone DnaJ-domain superfamily protein","protein_coding"
"Cre03.g185350","No alias","Chlamydomonas reinhardtii","callose synthase 5","protein_coding"
"Cre03.g190800","No alias","Chlamydomonas reinhardtii","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Cre03.g191100","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g193900","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g196050","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g197700","No alias","Chlamydomonas reinhardtii","trithorax-like protein 2","protein_coding"
"Cre03.g199350","No alias","Chlamydomonas reinhardtii","chromatin remodeling factor18","protein_coding"
"Cre03.g200900","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre04.g211700","No alias","Chlamydomonas reinhardtii","ARM repeat protein interacting with  ABF2","protein_coding"
"Cre04.g213050","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre04.g214350","No alias","Chlamydomonas reinhardtii","DNA-directed DNA polymerases","protein_coding"
"Cre04.g217944","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre04.g220950","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre04.g226001","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre04.g227000","No alias","Chlamydomonas reinhardtii","DNA mismatch repair protein, putative","protein_coding"
"Cre04.g233102","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre05.g233350","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre05.g235750","No alias","Chlamydomonas reinhardtii","MUTS homolog 6","protein_coding"
"Cre05.g239800","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre05.g243900","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g255800","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g278099","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g278146","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g278161","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g278199","No alias","Chlamydomonas reinhardtii","carotenoid cleavage dioxygenase 7","protein_coding"
"Cre06.g280800","No alias","Chlamydomonas reinhardtii","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Cre06.g281750","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g281766","No alias","Chlamydomonas reinhardtii","Chaperone DnaJ-domain superfamily protein","protein_coding"
"Cre06.g284400","No alias","Chlamydomonas reinhardtii","Arabidopsis Hop2 homolog","protein_coding"
"Cre06.g285650","No alias","Chlamydomonas reinhardtii","origin recognition complex protein 6","protein_coding"
"Cre06.g293000","No alias","Chlamydomonas reinhardtii","DNA primase, large subunit family","protein_coding"
"Cre06.g295700","No alias","Chlamydomonas reinhardtii","Minichromosome maintenance (MCM2/3/5) family protein","protein_coding"
"Cre06.g303536","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre07.g312350","No alias","Chlamydomonas reinhardtii","DNA primases;DNA primases","protein_coding"
"Cre07.g314700","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre07.g316350","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre07.g316850","No alias","Chlamydomonas reinhardtii","Minichromosome maintenance (MCM2/3/5) family protein","protein_coding"
"Cre07.g325716","No alias","Chlamydomonas reinhardtii","DNA ligase 1","protein_coding"
"Cre07.g334650","No alias","Chlamydomonas reinhardtii","breast cancer susceptibility1","protein_coding"
"Cre07.g338000","No alias","Chlamydomonas reinhardtii","minichromosome maintenance (MCM2/3/5) family protein","protein_coding"
"Cre07.g351400","No alias","Chlamydomonas reinhardtii","minichromosome maintenance 10","protein_coding"
"Cre07.g351450","No alias","Chlamydomonas reinhardtii","BUB1-related (BUB1: budding uninhibited by benzymidazol 1)","protein_coding"
"Cre07.g355200","No alias","Chlamydomonas reinhardtii","origin recognition complex protein 5","protein_coding"
"Cre08.g362450","No alias","Chlamydomonas reinhardtii","alpha-amylase-like 3","protein_coding"
"Cre08.g376350","No alias","Chlamydomonas reinhardtii","ASF1 like histone chaperone","protein_coding"
"Cre09.g387615","No alias","Chlamydomonas reinhardtii","Zinc-finger domain of monoamine-oxidase A repressor R1","protein_coding"
"Cre09.g389550","No alias","Chlamydomonas reinhardtii","Chaperone DnaJ-domain superfamily protein","protein_coding"
"Cre09.g393600","No alias","Chlamydomonas reinhardtii","DNA replication protein-related","protein_coding"
"Cre09.g394065","No alias","Chlamydomonas reinhardtii","SPIRAL1-like2","protein_coding"
"Cre09.g396957","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g397350","No alias","Chlamydomonas reinhardtii","RAD3-like DNA-binding helicase protein","protein_coding"
"Cre09.g402350","No alias","Chlamydomonas reinhardtii","SMAD/FHA domain-containing protein","protein_coding"
"Cre09.g409000","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g409850","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g412400","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g426850","No alias","Chlamydomonas reinhardtii","HXXXD-type acyl-transferase family protein","protein_coding"
"Cre10.g437300","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g440200","No alias","Chlamydomonas reinhardtii","structural maintenance of chromosomes 5","protein_coding"
"Cre10.g441250","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g441700","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g442500","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g450200","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g450750","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g452300","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g455600","No alias","Chlamydomonas reinhardtii","origin recognition complex 1","protein_coding"
"Cre10.g455850","No alias","Chlamydomonas reinhardtii","Minichromosome maintenance (MCM2/3/5) family protein","protein_coding"
"Cre10.g460000","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g461750","No alias","Chlamydomonas reinhardtii","methyltransferase 1","protein_coding"
"Cre10.g465900","No alias","Chlamydomonas reinhardtii","cell division control 2","protein_coding"
"Cre11.g467637","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre11.g467745","No alias","Chlamydomonas reinhardtii","spindle pole body component 98","protein_coding"
"Cre11.g482700","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre11.g483351","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g488500","No alias","Chlamydomonas reinhardtii","Chaperone DnaJ-domain superfamily protein","protein_coding"
"Cre12.g490150","No alias","Chlamydomonas reinhardtii","RECQ helicase SIM","protein_coding"
"Cre12.g490550","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g491050","No alias","Chlamydomonas reinhardtii","ribonucleotide reductase 2A","protein_coding"
"Cre12.g492950","No alias","Chlamydomonas reinhardtii","ribonucleotide reductase 1","protein_coding"
"Cre12.g497650","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g512450","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g512500","No alias","Chlamydomonas reinhardtii","zinc knuckle (CCHC-type) family protein","protein_coding"
"Cre12.g515850","No alias","Chlamydomonas reinhardtii","proliferating cellular nuclear antigen 1","protein_coding"
"Cre12.g522950","No alias","Chlamydomonas reinhardtii","septum site-determining protein (MIND)","protein_coding"
"Cre12.g524050","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g525500","No alias","Chlamydomonas reinhardtii","Spc97 / Spc98 family of spindle pole body (SBP) component","protein_coding"
"Cre12.g528200","No alias","Chlamydomonas reinhardtii","DNA replication helicase, putative","protein_coding"
"Cre12.g542400","No alias","Chlamydomonas reinhardtii","damaged DNA binding;DNA-directed DNA polymerases","protein_coding"
"Cre12.g556653","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre13.g563050","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre13.g576000","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre13.g588271","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre13.g588900","No alias","Chlamydomonas reinhardtii","Werner syndrome-like exonuclease","protein_coding"
"Cre14.g608900","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre14.g620050","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre14.g621250","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g651000","No alias","Chlamydomonas reinhardtii","Replication factor-A protein 1-related","protein_coding"
"Cre16.g652950","No alias","Chlamydomonas reinhardtii","transducin family protein / WD-40 repeat family protein","protein_coding"
"Cre16.g658600","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g664100","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g667850","No alias","Chlamydomonas reinhardtii","DUTP-PYROPHOSPHATASE-LIKE 1","protein_coding"
"Cre16.g667900","No alias","Chlamydomonas reinhardtii","AINTEGUMENTA-like 5","protein_coding"
"Cre16.g668200","No alias","Chlamydomonas reinhardtii","RING/FYVE/PHD zinc finger superfamily protein","protein_coding"
"Cre16.g676100","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g679950","No alias","Chlamydomonas reinhardtii","ATPase family associated with various cellular activities (AAA)","protein_coding"
"Cre16.g684155","No alias","Chlamydomonas reinhardtii","zinc ion binding","protein_coding"
"Cre16.g692750","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g693950","No alias","Chlamydomonas reinhardtii","glyoxal oxidase-related protein","protein_coding"
"Cre17.g701350","No alias","Chlamydomonas reinhardtii","Polynucleotidyl transferase, ribonuclease H-like superfamily protein","protein_coding"
"Cre17.g715150","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre17.g718400","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre17.g725900","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre17.g726500","No alias","Chlamydomonas reinhardtii","origin recognition complex subunit 4","protein_coding"
"Cre17.g732566","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre17.g732600","No alias","Chlamydomonas reinhardtii","glyoxal oxidase-related protein","protein_coding"
"Cre17.g746347","No alias","Chlamydomonas reinhardtii","uracil dna glycosylase","protein_coding"
"evm.model.contig_2042.4","No alias","Porphyridium purpureum","(at1g44900 : 727.0) Encodes MCM2 (MINICHROMOSOME MAINTENANCE 2), a protein essential to embryo development. Overexpression results in altered root meristem function.; MINICHROMOSOME MAINTENANCE 2 (MCM2); FUNCTIONS IN: DNA-dependent ATPase activity, DNA binding, ATP binding; INVOLVED IN: in 7 processes; LOCATED IN: nuclear chromatin; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 2 (InterPro:IPR008045), MCM protein 2, N-terminal (InterPro:IPR021092); BEST Arabidopsis thaliana protein match is: Minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT2G16440.1). & (q43704|mcm3_maize : 303.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 1454.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2048.10","No alias","Porphyridium purpureum","(at3g23580 : 461.0) Encodes one of the 3 ribonucleotide reductase (RNR) small subunit genes (RNR2A). Functionally redundant with the ribonucleotide reductase TSO2. mRNA was shown to specifically accumulate during the S-phase  of the cell cycle in synchronized tobacco BY2 cells. Critical for cell cycle progression, DNA damage repair and plant development.; ribonucleotide reductase 2A (RNR2A); CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase-related (InterPro:IPR012348), Ribonucleotide reductase (InterPro:IPR000358), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078); BEST Arabidopsis thaliana protein match is: Ferritin/ribonucleotide reductase-like family protein (TAIR:AT3G27060.1); Has 9602 Blast hits to 9597 proteins in 2376 species: Archae - 34; Bacteria - 4358; Metazoa - 261; Fungi - 240; Plants - 185; Viruses - 729; Other Eukaryotes - 3795 (source: NCBI BLink). & (p49730|rir2_tobac : 453.0) Ribonucleoside-diphosphate reductase small chain (EC 1.17.4.1) (Ribonucleotide reductase small subunit) (Ribonucleoside-diphosphate reductase R2 subunit) - Nicotiana tabacum (Common tobacco) & (reliability: 922.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2057.9","No alias","Porphyridium purpureum","(at3g25805 : 97.1) unknown protein; Has 98 Blast hits to 98 proteins in 45 species: Archae - 0; Bacteria - 51; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 194.2) &  (original description: no original description)","protein_coding"
"evm.model.contig_2062.24","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2068.12","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2072.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2084.13","No alias","Porphyridium purpureum","(o48653|dpola_orysa : 558.0) DNA polymerase alpha catalytic subunit (EC 2.7.7.7) - Oryza sativa (Rice) & (at5g67100 : 531.0) Encodes the putative catalytic subunit of the DNA polymerase alpha.  Interacts with genes involved in chromatin-mediated cellular memory. ICU2 genetically interacts with TERMINAL FLOWER2, the ortholog of HETEROCHROMATIN PROTEIN1 of animals and yeasts, and with the Polycomb group (PcG) gene CURLY LEAF. A number of regulatory genes were derepressed in the icu2-1 mutant, including genes associated with flowering time, floral meristem, and floral organ identity. Mutant has curled, involute leaves and causes early flowering.; INCURVATA2 (ICU2); FUNCTIONS IN: DNA-directed DNA polymerase activity; INVOLVED IN: negative regulation of flower development, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase, family B (InterPro:IPR022762), DNA-directed DNA polymerase, family B, exonuclease domain (InterPro:IPR006133), DNA-directed DNA polymerase, family B, conserved region (InterPro:IPR006134), Zinc finger, DNA-directed DNA polymerase, family B, alpha (InterPro:IPR015088), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), DNA-directed DNA polymerase, family B, conserved site (InterPro:IPR017964), DNA-directed DNA polymerase, family B (InterPro:IPR006172), DNA-directed DNA polymerase, family B,  pol2 (InterPro:IPR004578); BEST Arabidopsis thaliana protein match is: DNA binding;nucleotide binding;nucleic acid binding;DNA-directed DNA polymerases;DNA-directed DNA polymerases (TAIR:AT5G63960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1062.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2096.25","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2100.8","No alias","Porphyridium purpureum","(at5g22110 : 178.0) Encodes a protein with similarity to DNA polymerase epsilon subunit B an essential gene that is required for DNA replication. Homozygous mutants are embryo lethal. Expressed in meristematic , rapidly dividing regions.; DNA polymerase epsilon subunit B2 (DPB2); FUNCTIONS IN: DNA-directed DNA polymerase activity, DNA binding; INVOLVED IN: DNA replication, DNA-dependent DNA replication; LOCATED IN: epsilon DNA polymerase complex, nucleus; EXPRESSED IN: embryo, male gametophyte, apical meristem, female gametophyte; CONTAINS InterPro DOMAIN/s: DNA polymerase epsilon, subunit B (InterPro:IPR016266), DNA polymerase alpha/epsilon, subunit B (InterPro:IPR007185); Has 412 Blast hits to 394 proteins in 202 species: Archae - 0; Bacteria - 0; Metazoa - 125; Fungi - 144; Plants - 62; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 356.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2102.12","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2104.15","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2106.5","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding"
"evm.model.contig_2114.1","No alias","Porphyridium purpureum","(at3g25580 : 111.0) Thioredoxin superfamily protein; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin domain-containing protein 9 homolog (TAIR:AT2G18990.1); Has 1084 Blast hits to 1084 proteins in 275 species: Archae - 18; Bacteria - 74; Metazoa - 392; Fungi - 176; Plants - 221; Viruses - 0; Other Eukaryotes - 203 (source: NCBI BLink). & (reliability: 222.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2122.18","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2122.19","No alias","Porphyridium purpureum","(at5g13530 : 101.0) Encodes KEEP ON GOING (KEG), a RING E3 ligase involved in abscisic acid signaling.  KEG is essential for Arabidopsis growth and development.  ABA promotes KEG degradation via the ubiquitin dependent 26S proteasome pathway.; KEEP ON GOING (KEG); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Ankyrin repeat-containing domain (InterPro:IPR020683), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G32250.3). & (q8vyx2|akt1_orysa : 89.0) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (reliability: 202.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2126.7","No alias","Porphyridium purpureum","(at5g12470 : 136.0) Protein of unknown function (DUF3411); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, plastid, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3411 (InterPro:IPR021825); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF399 and DUF3411) (TAIR:AT2G40400.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 260.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2144.6","No alias","Porphyridium purpureum","(at2g21790 : 1100.0) encodes large subunit of ribonucleotide reductase involved in the production of deoxyribonucleoside triphosphates (dNTPs) for DNA replication and repair; ribonucleotide reductase 1 (RNR1); FUNCTIONS IN: ribonucleoside-diphosphate reductase activity, ATP binding; INVOLVED IN: response to cadmium ion, DNA replication, deoxyribonucleoside triphosphate biosynthetic process; LOCATED IN: ribonucleoside-diphosphate reductase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase large subunit, N-terminal (InterPro:IPR013509), Ribonucleoside-diphosphate reductase, alpha subunit (InterPro:IPR013346), ATP-cone (InterPro:IPR005144), Ribonucleotide reductase large subunit, C-terminal (InterPro:IPR000788), Ribonucleotide reductase R1 subunit, N-terminal (InterPro:IPR008926); Has 15326 Blast hits to 14804 proteins in 2790 species: Archae - 206; Bacteria - 6388; Metazoa - 177; Fungi - 215; Plants - 88; Viruses - 606; Other Eukaryotes - 7646 (source: NCBI BLink). & (reliability: 2200.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2146.14","No alias","Porphyridium purpureum","(at1g19880 : 171.0) Regulator of chromosome condensation (RCC1) family protein; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family protein (TAIR:AT5G63860.1); Has 17859 Blast hits to 6314 proteins in 497 species: Archae - 78; Bacteria - 2347; Metazoa - 6181; Fungi - 1100; Plants - 2708; Viruses - 16; Other Eukaryotes - 5429 (source: NCBI BLink). & (reliability: 342.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2248.1","No alias","Porphyridium purpureum","(at2g47980 : 116.0) Essential to the monopolar orientation of the kinetochores during meiosis.; sister-chromatid cohesion protein 3 (SCC3); FUNCTIONS IN: binding; INVOLVED IN: mitosis, attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation, meiotic sister chromatid cohesion, centromeric; LOCATED IN: chromosome, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024), STAG (InterPro:IPR013721), Stromalin conservative domain (InterPro:IPR020839); Has 568 Blast hits to 559 proteins in 184 species: Archae - 0; Bacteria - 2; Metazoa - 324; Fungi - 134; Plants - 52; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). & (reliability: 232.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2255.2","No alias","Porphyridium purpureum","(at5g10980 : 218.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleosome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3 (InterPro:IPR000164), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT4G40030.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q71h73|h33_vitvi : 216.0) Histone H3.3 - Vitis vinifera (Grape) & (reliability: 436.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2255.5","No alias","Porphyridium purpureum","(at5g02820 : 500.0) Involved in the patterning and shape of leaf trichomes. Encodes the DNA topoisomerase VI SPO11-3, involved in endoreduplication; ROOT HAIRLESS 2 (RHL2); CONTAINS InterPro DOMAIN/s: Spo11/DNA topoisomerase VI, subunit A, N-terminal (InterPro:IPR013049), DNA topoisomerase VI, subunit A (InterPro:IPR004085), Spo11/DNA topoisomerase VI, subunit A (InterPro:IPR002815); BEST Arabidopsis thaliana protein match is: Spo11/DNA topoisomerase VI, subunit A protein (TAIR:AT3G13170.1); Has 936 Blast hits to 932 proteins in 314 species: Archae - 223; Bacteria - 16; Metazoa - 170; Fungi - 119; Plants - 152; Viruses - 0; Other Eukaryotes - 256 (source: NCBI BLink). & (reliability: 1000.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2270.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2276.11","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2278.1","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding"
"evm.model.contig_2279.11","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2293.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2305.2","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding"
"evm.model.contig_2348.7","No alias","Porphyridium purpureum","(at3g12530 : 99.4) PSF2; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: DNA replication; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GINS complex (InterPro:IPR021151), GINS complex, subunit Psf2 (InterPro:IPR007257), GINS complex, subunit Psf2, subgroup (InterPro:IPR016906); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 198.8) &  (original description: no original description)","protein_coding"
"evm.model.contig_2494.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2501.11","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2501.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2501.4","No alias","Porphyridium purpureum","(at5g61000 : 172.0) RPA70D; FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: DNA replication; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Replication factor-a protein 1 Rpa1 (InterPro:IPR004591), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Replication factor A, C-terminal (InterPro:IPR013955), Replication factor-A protein 1, N-terminal (InterPro:IPR007199); BEST Arabidopsis thaliana protein match is: RPA70-kDa subunit B (TAIR:AT5G08020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 344.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3412.2","No alias","Porphyridium purpureum","(q9xfg3|tbg_phypa : 514.0) Tubulin gamma chain (Gamma tubulin) - Physcomitrella patens (Moss) & (at5g05620 : 508.0) Paralog of TUBG1, required for centrosomal and noncentrosomal microtubule nucleation. Involved in specification of cell identity, such as stomatal patterning. Constitutively expressed throughout plant.; gamma-tubulin  complex protein 2 (GCP2); FUNCTIONS IN: structural molecule activity, GTP binding, GTPase activity; INVOLVED IN: in 9 processes; LOCATED IN: in 6 components; CONTAINS InterPro DOMAIN/s: Gamma tubulin (InterPro:IPR002454), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: gamma-tubulin (TAIR:AT3G61650.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1016.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3416.16","No alias","Porphyridium purpureum","(at3g24515 : 142.0) ubiquitin-conjugating enzyme 37 (UBC37); FUNCTIONS IN: ubiquitin-protein ligase activity, small conjugating protein ligase activity; INVOLVED IN: regulation of protein metabolic process, post-translational protein modification; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 11 (TAIR:AT3G08690.2); Has 10163 Blast hits to 10152 proteins in 398 species: Archae - 0; Bacteria - 2; Metazoa - 4605; Fungi - 2137; Plants - 1818; Viruses - 27; Other Eukaryotes - 1574 (source: NCBI BLink). & (p25866|ubc2_wheat : 90.5) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Triticum aestivum (Wheat) & (reliability: 284.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3420.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3436.5","No alias","Porphyridium purpureum","(at3g18524 : 456.0) Encodes a DNA mismatch repair homolog of human MutS gene, MSH6. MSH2 is involved in maintaining genome stability and repressing recombination of mismatched heteroduplexes.There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2 has different binding specificity to different mismatches in combination with MSH3, MSH6, or MSH7.; MUTS homolog 2 (MSH2); FUNCTIONS IN: damaged DNA binding, protein binding, mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair, negative regulation of reciprocal meiotic recombination; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein MutS, clamp (InterPro:IPR007861), DNA mismatch repair protein MutS, connector (InterPro:IPR007860), DNA mismatch repair protein MutS, core (InterPro:IPR007696), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS-like, N-terminal (InterPro:IPR007695), DNA mismatch repair protein, MSH2 (InterPro:IPR011184); BEST Arabidopsis thaliana protein match is: homolog of DNA mismatch repair protein MSH3 (TAIR:AT4G25540.1); Has 13560 Blast hits to 13453 proteins in 2654 species: Archae - 128; Bacteria - 8942; Metazoa - 734; Fungi - 813; Plants - 457; Viruses - 3; Other Eukaryotes - 2483 (source: NCBI BLink). & (q9xgc9|msh2_maize : 412.0) DNA mismatch repair protein MSH2 (MUS1) - Zea mays (Maize) & (reliability: 912.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3440.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3442.11","No alias","Porphyridium purpureum","(p19976|fri1_soybn : 190.0) Ferritin-1, chloroplast precursor (EC 1.16.3.1) (SOF-35) (SFerH-1) - Glycine max (Soybean) & (at5g01600 : 185.0) Encodes  a ferretin protein that is targeted to the chloroplast. Member of a Ferritin gene family. Gene expression is induced in response to iron overload and by nitric oxide. Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.; ferretin 1 (FER1); FUNCTIONS IN: ferric iron binding, iron ion binding; INVOLVED IN: in 12 processes; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ferritin, N-terminal (InterPro:IPR001519), Ferritin-related (InterPro:IPR012347), Ferritin-like (InterPro:IPR009040), Ferritin, conserved site (InterPro:IPR014034), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078), Ferritin/Dps protein (InterPro:IPR008331); BEST Arabidopsis thaliana protein match is: ferritin 4 (TAIR:AT2G40300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 370.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3451.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3467.7","No alias","Porphyridium purpureum","(at1g67630 : 101.0) DNA polymerase alpha 2 (POLA2); FUNCTIONS IN: DNA binding, DNA-directed DNA polymerase activity; INVOLVED IN: DNA replication; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase alpha, subunit B N-terminal (InterPro:IPR013627), DNA polymerase alpha, subunit B (InterPro:IPR016722), DNA polymerase alpha/epsilon, subunit B (InterPro:IPR007185); Has 415 Blast hits to 412 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 175; Fungi - 140; Plants - 46; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (reliability: 202.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3475.3","No alias","Porphyridium purpureum","(q00268|pcna1_dauca : 227.0) Proliferating cell nuclear antigen (PCNA) (Cyclin) - Daucus carota (Carrot) & (at1g07370 : 226.0) Encodes putative proliferating cell nuclear antigen involved in cell cycle regulation.; proliferating cellular nuclear antigen 1 (PCNA1); CONTAINS InterPro DOMAIN/s: Proliferating cell nuclear antigen, PCNA (InterPro:IPR000730), Proliferating cell nuclear antigen, PCNA, C-terminal (InterPro:IPR022649), Proliferating cell nuclear antigen, PCNA, conserved site (InterPro:IPR022659), Proliferating cell nuclear antigen, PCNA, N-terminal (InterPro:IPR022648); BEST Arabidopsis thaliana protein match is: proliferating cell nuclear antigen 2 (TAIR:AT2G29570.1); Has 1857 Blast hits to 1845 proteins in 456 species: Archae - 391; Bacteria - 0; Metazoa - 315; Fungi - 169; Plants - 159; Viruses - 71; Other Eukaryotes - 752 (source: NCBI BLink). & (reliability: 452.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3477.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3508.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3572.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3592.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3641.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3641.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3692.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3692.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3702.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3708.1","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding"
"evm.model.contig_435.14","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_437.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_440.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4407.6","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding"
"evm.model.contig_4407.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4416.9","No alias","Porphyridium purpureum","(at1g67320 : 211.0) DNA primase, large subunit family; FUNCTIONS IN: DNA primase activity; INVOLVED IN: DNA replication, synthesis of RNA primer; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA primase, large subunit, eukaryotic (InterPro:IPR016558), DNA primase, large subunit, eukaryotic/archaeal (InterPro:IPR007238). & (reliability: 422.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4419.9","No alias","Porphyridium purpureum","(p36183|enpl_horvu : 503.0) Endoplasmin homolog precursor (GRP94 homolog) - Hordeum vulgare (Barley) & (at4g24190 : 494.0) encodes an ortholog of GRP94, an ER-resident HSP90-like protein and is involved in regulation of meristem size and organization. Single and double mutant analyses suggest that SHD may be required for the correct folding and/or complex formation of CLV proteins. Lines carrying recessive mutations in this locus exhibits expanded shoot meristems, disorganized root meristems, and defective pollen tube elongation. Transcript is detected in all tissues examined and is not induced by heat.  Endoplasmin supports the protein secretory pathway and has a role in proliferating tissues.; SHEPHERD (SHD); FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: in 8 processes; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Chaperone protein htpG (InterPro:IPR001404), Heat shock protein Hsp90, C-terminal (InterPro:IPR020576), Heat shock protein Hsp90, N-terminal (InterPro:IPR020575), Molecular chaperone, heat shock protein, endoplasmin (InterPro:IPR015566), ATPase-like, ATP-binding domain (InterPro:IPR003594), Heat shock protein Hsp90, conserved site (InterPro:IPR019805), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); BEST Arabidopsis thaliana protein match is: heat shock protein 90.1 (TAIR:AT5G52640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 988.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4448.13","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4450.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4458.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4495.7","No alias","Porphyridium purpureum","(at3g27640 : 142.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G43770.1); Has 36714 Blast hits to 22017 proteins in 645 species: Archae - 42; Bacteria - 5151; Metazoa - 14249; Fungi - 8186; Plants - 4562; Viruses - 0; Other Eukaryotes - 4524 (source: NCBI BLink). & (reliability: 284.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_450.8","No alias","Porphyridium purpureum","(at3g54960 : 232.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). Neither AtIRE1-2 nor AtbZIP60 appear to be required for this response.; PDI-like 1-3 (PDIL1-3); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: response to endoplasmic reticulum stress; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Protein disulphide isomerase (InterPro:IPR005792), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 1-4 (TAIR:AT5G60640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p29828|pdi_medsa : 215.0) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI) - Medicago sativa (Alfalfa) & (reliability: 464.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_462.15","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_484.8","No alias","Porphyridium purpureum","(at2g38630 : 499.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G54190.1); Has 139 Blast hits to 135 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 105; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). & (reliability: 998.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_498.7","No alias","Porphyridium purpureum","(at3g18630 : 219.0) Encodes a uracil-DNA glycosylase (UDG) involved in a base excision DNA repair pathway in mitochondria.; uracil dna glycosylase (UNG); FUNCTIONS IN: uracil DNA N-glycosylase activity; INVOLVED IN: DNA repair, base-excision repair; LOCATED IN: mitochondrion; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Uracil-DNA glycosylase (InterPro:IPR002043), Uracil-DNA glycosylase-like (InterPro:IPR005122); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10550.1); Has 5606 Blast hits to 5606 proteins in 2219 species: Archae - 2; Bacteria - 4117; Metazoa - 124; Fungi - 141; Plants - 47; Viruses - 234; Other Eukaryotes - 941 (source: NCBI BLink). & (reliability: 438.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_522.19","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_522.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_531.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_539.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_559.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_567.4","No alias","Porphyridium purpureum","(at2g40550 : 167.0) Encodes a nuclear localized target of E2Fa-DPa, transcription factors controlling cell cycle progression. Required for sister chromatid cohesion and DNA repair.; E2F target gene 1 (ETG1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: sister chromatid cohesion, postreplication repair, DNA replication; LOCATED IN: nuclear replisome, nucleus, chloroplast envelope, MCM complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2044, membrane (InterPro:IPR019140); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 334.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_610.3","No alias","Porphyridium purpureum","(at3g42660 : 146.0) transducin family protein / WD-40 repeat family protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), Protein of unknown function DUF3639 (InterPro:IPR022100), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G23430.1); Has 41589 Blast hits to 20655 proteins in 706 species: Archae - 66; Bacteria - 8583; Metazoa - 14223; Fungi - 8894; Plants - 4578; Viruses - 3; Other Eukaryotes - 5242 (source: NCBI BLink). & (reliability: 292.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_662.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_662.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_693.5","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding"
"evm.model.contig_790.3","No alias","Porphyridium purpureum","(at5g41480 : 92.0) Encodes a dihydrofolate synthetase based on yeast complementation experiments. This protein is involved in folate biosynthesis.; GLOBULAR ARREST1 (GLA1); FUNCTIONS IN: dihydrofolate synthase activity; INVOLVED IN: one-carbon metabolic process, embryo development ending in seed dormancy; LOCATED IN: mitochondrial matrix; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mur ligase, central (InterPro:IPR013221), Folylpolyglutamate synthetase, conserved site (InterPro:IPR018109), Mur ligase, C-terminal (InterPro:IPR004101), Folylpolyglutamate synthetase (InterPro:IPR001645); BEST Arabidopsis thaliana protein match is: DHFS-FPGS homolog B (TAIR:AT5G05980.2); Has 8245 Blast hits to 8243 proteins in 2505 species: Archae - 47; Bacteria - 5105; Metazoa - 156; Fungi - 354; Plants - 131; Viruses - 0; Other Eukaryotes - 2452 (source: NCBI BLink). & (reliability: 184.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_861.1","No alias","Porphyridium purpureum","(at5g60550 : 182.0) Encodes a geminivirus Rep interacting kinase (GRIK; GRIK1/AT3G45240, GRIK2/AT5G60550). GRIKs are SnRK1 (SNF1-related kinases) activating kinases. Both GRIKs specifically bind to the SnRK1 catalytic subunit and phosphorylate the equivalent threonine residue in its activation loop in vitro.; geminivirus rep interacting kinase 2 (GRIK2); CONTAINS InterPro DOMAIN/s: Calcium/calmodulin-dependent protein kinase kinase (InterPro:IPR020657), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: geminivirus rep interacting kinase 1 (TAIR:AT3G45240.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q75v63|sapk3_orysa : 121.0) Serine/threonine-protein kinase SAPK3 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 3) (Protein kinase REK) - Oryza sativa (Rice) & (reliability: 364.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000042.231","No alias","Cyanophora paradoxa","(o81263|kith_orysa : 138.0) Thymidine kinase (EC 2.7.1.21) - Oryza sativa (Rice) & (at5g23070 : 136.0) Thymidine kinase; FUNCTIONS IN: thymidine kinase activity, ATP binding; INVOLVED IN: pyrimidine deoxyribonucleoside interconversion, anaerobic respiration; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thymidine kinase (InterPro:IPR001267), Thymidine kinase, conserved site (InterPro:IPR020633); BEST Arabidopsis thaliana protein match is: Thymidine kinase (TAIR:AT3G07800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 272.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000042.241","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000042.30","No alias","Cyanophora paradoxa","(at1g63160 : 390.0) replication factor C 2 (RFC2); FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA replication; LOCATED IN: DNA replication factor C complex; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), Replication factor C (InterPro:IPR013748), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921); BEST Arabidopsis thaliana protein match is: ATPase family associated with various cellular activities (AAA)  (TAIR:AT1G21690.1); Has 17520 Blast hits to 17472 proteins in 2840 species: Archae - 620; Bacteria - 9832; Metazoa - 859; Fungi - 958; Plants - 372; Viruses - 89; Other Eukaryotes - 4790 (source: NCBI BLink). & (reliability: 780.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000057.46","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000076.52","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000076.93","No alias","Cyanophora paradoxa","(o04235|ssrp1_vicfa : 250.0) FACT complex subunit SSRP1 (Facilitates chromatin transcription complex subunit SSRP1) (Recombination signal sequence recognition protein 1) - Vicia faba (Broad bean) & (at3g28730 : 239.0) encodes a component of the FAcilitates Chromatin Transcription (FACT) complex, SSRP1. Along with STP16 binds to the promoter of FLC.; high mobility group (HMG); CONTAINS InterPro DOMAIN/s: Structure-specific recognition protein (InterPro:IPR000969), High mobility group, superfamily (InterPro:IPR009071), High mobility group, HMG1/HMG2 (InterPro:IPR000910); BEST Arabidopsis thaliana protein match is: high mobility group B1 (TAIR:AT3G51880.2); Has 8066 Blast hits to 7188 proteins in 653 species: Archae - 0; Bacteria - 14; Metazoa - 5623; Fungi - 822; Plants - 671; Viruses - 15; Other Eukaryotes - 921 (source: NCBI BLink). & (reliability: 478.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000139.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000142.23","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000144.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000144.81","No alias","Cyanophora paradoxa","(at5g05970 : 123.0) a WD40 repeat protein related to the animal NEDD1/GCP-WD protein, which interacts with the g-tubulin complex. Plays a critical role in MT organization during mitosis; NEURAL PRECURSOR CELL EXPRESSED, DEVELOPMENTALLY DOWN-REGULATED GENE 1 (NEDD1); FUNCTIONS IN: nucleotide binding; INVOLVED IN: in 6 processes; LOCATED IN: kinetochore microtubule, CUL4 RING ubiquitin ligase complex; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G43770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 246.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000147.27","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000147.46","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000157.111","No alias","Cyanophora paradoxa","(at5g46210 : 334.0) Arabidopsis CULLIN4 (CUL4) forms an E3 ubiquitin ligase with the CDD complex and a common catalytic subunit RBX1 in mediating light control of development.  This CUL4-based E3 ligase is essential for the repression of photomorphogenesis.  The partial loss of CUL4 function resulted in a constitutive photomorphogenic phenotype with respect to morphogenesis and light-regulated gene expression. CUL4 exhibits a synergistic genetic interaction with COP10 and DET1.; cullin4 (CUL4); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Cullin homology (InterPro:IPR016158), Cullin protein, neddylation domain (InterPro:IPR019559), Cullin, N-terminal (InterPro:IPR001373), Cullin, conserved site (InterPro:IPR016157), Cullin repeat-like-containing domain (InterPro:IPR016159); BEST Arabidopsis thaliana protein match is: cullin 3B (TAIR:AT1G69670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 668.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000157.40","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000157.83","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000204.89","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000217.26","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000237.27","No alias","Cyanophora paradoxa","(at5g52800 : 126.0) DNA primases; FUNCTIONS IN: DNA primase activity; INVOLVED IN: DNA replication; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: DNA primase, UL52/UL70 type, Herpesviridae (InterPro:IPR004340); Has 201 Blast hits to 173 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 82; Fungi - 0; Plants - 45; Viruses - 8; Other Eukaryotes - 66 (source: NCBI BLink). & (reliability: 252.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000241.113","No alias","Cyanophora paradoxa","(p51173|apea_dicdi : 224.0) DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) (Class II apurinic/apyrimidinic(AP)-endonuclease) - Dictyostelium discoideum (Slime mold) & (at2g41460 : 222.0) apurinic endonuclease-redox protein. It functions as an apurinic/apyrimidinic class II endonuclease, and is involved in DNA repair.; apurinic endonuclease-redox protein (ARP); CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034), AP endonuclease, family 1, binding site (InterPro:IPR020847), Exodeoxyribonuclease III xth (InterPro:IPR004808), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding endonuclease/exonuclease/phosphatase (TAIR:AT3G60950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 444.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000241.178","No alias","Cyanophora paradoxa","(q9lre5|dpod2_orysa : 317.0) DNA polymerase delta small subunit (EC 2.7.7.7) - Oryza sativa (Rice) & (at2g42120 : 311.0) DNA polymerase delta small subunit (POLD2); FUNCTIONS IN: DNA binding, DNA-directed DNA polymerase activity; INVOLVED IN: DNA replication; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase alpha/epsilon, subunit B (InterPro:IPR007185); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 622.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000241.38","No alias","Cyanophora paradoxa","(at4g02060 : 657.0) Member of the minichromosome maintenance complex, involved in DNA replication initiation. Abundant in proliferating and  endocycling tissues. Localized in the nucleus during G1, S and G2 phases of the  cell cycle, and are released into the cytoplasmic compartment during mitosis. Binds chromatin.; PROLIFERA (PRL); CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), ATPase, AAA+ type, core (InterPro:IPR003593), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 7 (InterPro:IPR008050); BEST Arabidopsis thaliana protein match is: minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT5G44635.1). & (q43704|mcm3_maize : 291.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 1314.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000241.91","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000254.117","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000254.120","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000254.61","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000342.9","No alias","Cyanophora paradoxa","(at5g41880 : 330.0) POLA3; FUNCTIONS IN: DNA primase activity; INVOLVED IN: DNA replication, synthesis of RNA primer, DNA replication; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA primase, small subunit (InterPro:IPR002755), DNA primase, small subunit, eukaryotic/archaeal (InterPro:IPR014052); Has 510 Blast hits to 504 proteins in 249 species: Archae - 95; Bacteria - 0; Metazoa - 124; Fungi - 138; Plants - 44; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). & (reliability: 660.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000350.25","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000383.42","No alias","Cyanophora paradoxa","(at3g27060 : 431.0) Encodes one of the 3 ribonucleotide reductase (RNR) small subunit genes. TSO2 transcription occurs predominantly at the S-phase of the cell cycle and its expression pattern is consistent with its role in dNDP  biosynthesis during DNA replication in actively dividing cells. Critical for cell cycle progression, DNA damage repair and plant development.; TSO MEANING 'UGLY' IN CHINESE 2 (TSO2); FUNCTIONS IN: oxidoreductase activity, transition metal ion binding, ribonucleoside-diphosphate reductase activity; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase-related (InterPro:IPR012348), Ribonucleotide reductase (InterPro:IPR000358), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078); BEST Arabidopsis thaliana protein match is: ribonucleotide reductase 2A (TAIR:AT3G23580.1); Has 9355 Blast hits to 9350 proteins in 2299 species: Archae - 34; Bacteria - 4270; Metazoa - 263; Fungi - 240; Plants - 185; Viruses - 729; Other Eukaryotes - 3634 (source: NCBI BLink). & (p49730|rir2_tobac : 427.0) Ribonucleoside-diphosphate reductase small chain (EC 1.17.4.1) (Ribonucleotide reductase small subunit) (Ribonucleoside-diphosphate reductase R2 subunit) - Nicotiana tabacum (Common tobacco) & (reliability: 862.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000383.89","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000388.21","No alias","Cyanophora paradoxa","(at3g18630 : 220.0) Encodes a uracil-DNA glycosylase (UDG) involved in a base excision DNA repair pathway in mitochondria.; uracil dna glycosylase (UNG); FUNCTIONS IN: uracil DNA N-glycosylase activity; INVOLVED IN: DNA repair, base-excision repair; LOCATED IN: mitochondrion; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Uracil-DNA glycosylase (InterPro:IPR002043), Uracil-DNA glycosylase-like (InterPro:IPR005122); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10550.1); Has 5606 Blast hits to 5606 proteins in 2219 species: Archae - 2; Bacteria - 4117; Metazoa - 124; Fungi - 141; Plants - 47; Viruses - 234; Other Eukaryotes - 941 (source: NCBI BLink). & (reliability: 440.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000402.43","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000405.22","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000405.51","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000459.66","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000523.29","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000545.28","No alias","Cyanophora paradoxa","(at5g17410 : 387.0) Spc97 / Spc98 family of spindle pole body (SBP) component; INVOLVED IN: microtubule cytoskeleton organization; LOCATED IN: spindle pole, microtubule organizing center; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259); BEST Arabidopsis thaliana protein match is: spindle pole body component 98 (TAIR:AT5G06680.1); Has 1351 Blast hits to 1243 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 645; Fungi - 324; Plants - 181; Viruses - 0; Other Eukaryotes - 201 (source: NCBI BLink). & (reliability: 774.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000663.27","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000681.45","No alias","Cyanophora paradoxa","(p24314|pcna_catro : 99.8) Proliferating cell nuclear antigen (PCNA) (Cyclin) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at2g29570 : 96.3) Functionally interacts with POLH to repair DNA damaged by UVB damage.; proliferating cell nuclear antigen 2 (PCNA2); FUNCTIONS IN: DNA binding, DNA polymerase processivity factor activity; INVOLVED IN: regulation of DNA replication, error-prone translesion synthesis; LOCATED IN: PCNA complex, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proliferating cell nuclear antigen, PCNA (InterPro:IPR000730), Proliferating cell nuclear antigen, PCNA, C-terminal (InterPro:IPR022649), Proliferating cell nuclear antigen, PCNA, conserved site (InterPro:IPR022659), Proliferating cell nuclear antigen, PCNA, N-terminal (InterPro:IPR022648); BEST Arabidopsis thaliana protein match is: proliferating cellular nuclear antigen 1 (TAIR:AT1G07370.1); Has 1860 Blast hits to 1848 proteins in 457 species: Archae - 391; Bacteria - 0; Metazoa - 314; Fungi - 169; Plants - 159; Viruses - 73; Other Eukaryotes - 754 (source: NCBI BLink). & (reliability: 192.6) &  (original description: no original description)","protein_coding"
"evm.model.tig00000691.32","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000692.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000692.44","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000692.52","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000704.48","No alias","Cyanophora paradoxa","(at5g27740 : 386.0) A locus involved in embryogenesis. Mutations in this locus result in embryo lethality.; EMBRYO DEFECTIVE 2775 (EMB2775); FUNCTIONS IN: nucleoside-triphosphatase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), DNA polymerase III, clamp-loader complex, subunit E, C-terminal (InterPro:IPR019483), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921); BEST Arabidopsis thaliana protein match is: ATPase family associated with various cellular activities (AAA)  (TAIR:AT1G21690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 772.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000718.65","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000754.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000754.31","No alias","Cyanophora paradoxa","(at1g08130 : 306.0) Encodes the Arabidopsis DNA ligase 1 that provides the major DNA ligase activity in cells and plays a key role in both DNA replication and excision repair pathways.  Indispensable for cell viability. AtLIG1 expresses one major and two minor mRNA transcripts differing only in the length of the 5' untranslated leader sequences preceding a common ORF. Translation from the first in-frame start codon produces an AtLIG1 isoform that is targeted exclusively to the mitochondria. Translation initiation from the second in-frame start codon produces an AtLIG1 isoform targeted only to the nucleus.; DNA ligase 1 (LIG1); FUNCTIONS IN: DNA binding, DNA ligase (ATP) activity, ATP binding; INVOLVED IN: DNA repair, DNA replication, DNA recombination; LOCATED IN: mitochondrion, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA ligase, N-terminal (InterPro:IPR012308), ATP dependent DNA ligase, central (InterPro:IPR012310), ATP dependent DNA ligase, C-terminal (InterPro:IPR012309), ATP-dependent DNA ligase (InterPro:IPR000977), ATP-dependent DNA ligase, conserved site (InterPro:IPR016059); BEST Arabidopsis thaliana protein match is: ATP-dependent DNA ligase (TAIR:AT1G49250.1); Has 3556 Blast hits to 3521 proteins in 879 species: Archae - 298; Bacteria - 1538; Metazoa - 375; Fungi - 434; Plants - 112; Viruses - 159; Other Eukaryotes - 640 (source: NCBI BLink). & (q7x7e9|dnl4_orysa : 80.9) Putative DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4) - Oryza sativa (Rice) & (reliability: 612.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000789.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000789.46","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000789.47","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000806.37","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000808.15","No alias","Cyanophora paradoxa","(at5g58230 : 455.0) Encodes a WD-40 repeat containing protein that functions in chromatin assembly as part of the CAF1 and FIE complex. Mutants exhibit parthenogenetic development that includes proliferation of unfertilized endosperm and embryos. In heterozygous plants 50% of embryos abort. Of the aborted embryos the early aborted class are homozygous and the later aborting lass are heterozygotes in which the defective allele is maternally transmitted. Other phenotypes include defects in ovule morphogenesis and organ initiation,as well as increased levels of heterochromatic DNA. MSI1 is needed for the transition to flowering. In Arabidopsis, the three CAF-1 subunits are encoded by FAS1, FAS2 and, most likely, MSI1, respectively. Mutations in FAS1 or FAS2 lead to increased frequency of homologous recombination and T-DNA integration in Arabidopsis. In the ovule, the MSI1 transcripts are accumulated at their highest level before fertilization and gradually decrease after fertilization. MSI is biallelically expressed, the paternall allele is expressed in the endosperm and embryo and is not imprinted. MSI1 forms a complex with RBR1 that is required for activation of the imprinted genes FIS2 and FWA. This activation is mediated by MSI1/RBR1 mediated repression of MET1.; MULTICOPY SUPRESSOR OF IRA1 (MSI1); FUNCTIONS IN: protein binding; INVOLVED IN: in 13 processes; LOCATED IN: nucleus, chloroplast, chromatin remodeling complex, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histone-binding protein RBBP4 (InterPro:IPR022052), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT2G16780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 910.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000823.18","No alias","Cyanophora paradoxa","(at4g19130 : 136.0) Replication factor-A protein 1-related; FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding; INVOLVED IN: DNA replication; LOCATED IN: nucleus; EXPRESSED IN: sperm cell, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Replication factor-a protein 1 Rpa1 (InterPro:IPR004591), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Replication factor A, C-terminal (InterPro:IPR013955), Zinc finger, CCHC-type (InterPro:IPR001878), Replication factor-A protein 1, N-terminal (InterPro:IPR007199); BEST Arabidopsis thaliana protein match is: Replication factor-A protein 1-related (TAIR:AT5G45400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 272.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000823.19","No alias","Cyanophora paradoxa","(at2g06510 : 172.0) Encodes a homolog of Replication Protein A that is involved in meiosis I in pollen mother cells. rpa1a mutants have a reduced number of class I crossovers. The protein is located in chromatin-associated foci in early leptotene and can be detected in these foci until late pachytene of meiosis I.; replication protein A 1A (RPA1A); FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: in 6 processes; LOCATED IN: nuclear chromatin; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Replication factor-a protein 1 Rpa1 (InterPro:IPR004591), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Replication factor A, C-terminal (InterPro:IPR013955), Replication factor-A protein 1, N-terminal (InterPro:IPR007199); BEST Arabidopsis thaliana protein match is: Replication factor-A protein 1-related (TAIR:AT4G19130.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 344.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000829.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000857.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000863.41","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000865.33","No alias","Cyanophora paradoxa","(p25387|gblp_chlre : 151.0) Guanine nucleotide-binding protein subunit beta-like protein - Chlamydomonas reinhardtii & (at3g49660 : 140.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: G-protein coupled receptor protein signaling pathway; LOCATED IN: chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G02730.1); Has 118516 Blast hits to 43755 proteins in 1024 species: Archae - 92; Bacteria - 12360; Metazoa - 47439; Fungi - 25856; Plants - 15887; Viruses - 9; Other Eukaryotes - 16873 (source: NCBI BLink). & (reliability: 270.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000882.29","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000889.32","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000900.37","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000940.20","No alias","Cyanophora paradoxa","(at4g35470 : 118.0) Encodes PIRL4, a member of the Plant Intracellular Ras-group-related LRRs (Leucine rich repeat proteins). PIRLs are a distinct, plant-specific class of intracellular LRRs that likely mediate protein interactions, possibly in the context of signal transduction.; plant intracellular ras group-related LRR 4 (PIRL4); INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: plant intracellular ras group-related LRR 5 (TAIR:AT2G17440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 230.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000970.31","No alias","Cyanophora paradoxa","(at1g08260 : 86.3) Similar to POL2A, DNA polymerase epsilon catalytic subunit. Essential for Arabidopsis growth. Null homozygotes are embryo lethal, partial loss of function alleles show embryo patterning defects such as root pole displacement. Delayed progression through cell cycle results in embryos with smaller numbers of larger cells.; TILTED 1 (TIL1); FUNCTIONS IN: DNA-directed DNA polymerase activity, DNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: positive regulation of S phase of mitotic cell cycle, negative regulation of long-day photoperiodism, flowering, embryo development ending in seed dormancy; LOCATED IN: apoplast, epsilon DNA polymerase complex; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase, family B (InterPro:IPR022762), DNA-directed DNA polymerase, family B, exonuclease domain (InterPro:IPR006133), Domain of unknown function DUF1744 (InterPro:IPR013697), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), DNA-directed DNA polymerase, family B, conserved region (InterPro:IPR006134); BEST Arabidopsis thaliana protein match is: DNA polymerase epsilon catalytic subunit (TAIR:AT2G27120.1); Has 2011 Blast hits to 1700 proteins in 652 species: Archae - 331; Bacteria - 603; Metazoa - 305; Fungi - 291; Plants - 83; Viruses - 58; Other Eukaryotes - 340 (source: NCBI BLink). & (reliability: 172.6) &  (original description: no original description)","protein_coding"
"evm.model.tig00000980.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000984.18","No alias","Cyanophora paradoxa","(at5g15920 : 305.0) Encodes SMC5 (STRUCTURAL MAINTENANCE OF CHROMOSOMES 5), a component of the SMC5/6 complex.  SMC5/6 complex promotes sister chromatid alignment and homologous recombination after DNA damage.; structural maintenance of chromosomes 5 (SMC5); FUNCTIONS IN: ATP binding; INVOLVED IN: sister chromatid cohesion, chromosome segregation; LOCATED IN: chromosome, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RecF/RecN/SMC protein, N-terminal (InterPro:IPR003395); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G61460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 610.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000989.31","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001000.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001024.23","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001030.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001030.24","No alias","Cyanophora paradoxa","(at5g19820 : 80.1) embryo defective 2734 (emb2734); FUNCTIONS IN: lyase activity, binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cell wall, phycobilisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G27640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 160.2) &  (original description: no original description)","protein_coding"
"evm.model.tig00001041.20","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001049.34","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001056.24","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001073.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001107.10","No alias","Cyanophora paradoxa","(at1g67630 : 106.0) DNA polymerase alpha 2 (POLA2); FUNCTIONS IN: DNA binding, DNA-directed DNA polymerase activity; INVOLVED IN: DNA replication; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase alpha, subunit B N-terminal (InterPro:IPR013627), DNA polymerase alpha, subunit B (InterPro:IPR016722), DNA polymerase alpha/epsilon, subunit B (InterPro:IPR007185); Has 415 Blast hits to 412 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 175; Fungi - 140; Plants - 46; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (reliability: 212.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001154.43","No alias","Cyanophora paradoxa","(at5g52910 : 104.0) homolog of Drosophila timeless; TIMELESS (ATIM); CONTAINS InterPro DOMAIN/s: Timeless C-terminal (InterPro:IPR007725), Timeless protein (InterPro:IPR006906); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 208.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001155.10","No alias","Cyanophora paradoxa","(at2g44900 : 135.0) ARABIDILLO-1 and its homolog, ARABIDILLO -2, are unique among Arabidopsis Arm-repeat proteins in having an F-box motif and fall into a phylogenetically distinct subgroup from other plant Arm-repeat proteins Similar to arm repeat protein in rice and armadillo/beta-catenin repeat family protein / F-box family protein in Dictyostelium. ARABIDILLO-1 promote lateral root development. Mutant plants form fewer lateral roots, while ARABIDILLO-1-overexpressing lines produce more lateral roots than wild-type seedlings.; ARABIDILLO-1 (ARABIDILLO-1); FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: lateral root development; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARABIDILLO-2 (TAIR:AT3G60350.1); Has 10074 Blast hits to 5287 proteins in 284 species: Archae - 0; Bacteria - 24; Metazoa - 4121; Fungi - 736; Plants - 4117; Viruses - 0; Other Eukaryotes - 1076 (source: NCBI BLink). & (reliability: 258.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001187.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001214.13","No alias","Cyanophora paradoxa","(at5g26680 : 234.0) 5'-3' exonuclease family protein; FUNCTIONS IN: 5'-3' exonuclease activity, DNA binding, catalytic activity, nuclease activity; INVOLVED IN: DNA repair; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: XPG conserved site (InterPro:IPR019974), XPG N-terminal (InterPro:IPR006085), DNA repair protein (XPGC)/yeast Rad (InterPro:IPR006084), 5'-3' exonuclease, N-terminal (InterPro:IPR002421), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), Helix-hairpin-helix motif, class 2 (InterPro:IPR008918), XPG/RAD2 endonuclease (InterPro:IPR006086); BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT1G29630.2); Has 3563 Blast hits to 3243 proteins in 839 species: Archae - 284; Bacteria - 855; Metazoa - 643; Fungi - 727; Plants - 266; Viruses - 42; Other Eukaryotes - 746 (source: NCBI BLink). & (q9sxq6|fen1a_orysa : 231.0) Flap endonuclease 1a (EC 3.1.-.-) (OsFEN-1a) - Oryza sativa (Rice) & (reliability: 468.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001224.8","No alias","Cyanophora paradoxa","(at3g18524 : 614.0) Encodes a DNA mismatch repair homolog of human MutS gene, MSH6. MSH2 is involved in maintaining genome stability and repressing recombination of mismatched heteroduplexes.There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2 has different binding specificity to different mismatches in combination with MSH3, MSH6, or MSH7.; MUTS homolog 2 (MSH2); FUNCTIONS IN: damaged DNA binding, protein binding, mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair, negative regulation of reciprocal meiotic recombination; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein MutS, clamp (InterPro:IPR007861), DNA mismatch repair protein MutS, connector (InterPro:IPR007860), DNA mismatch repair protein MutS, core (InterPro:IPR007696), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS-like, N-terminal (InterPro:IPR007695), DNA mismatch repair protein, MSH2 (InterPro:IPR011184); BEST Arabidopsis thaliana protein match is: homolog of DNA mismatch repair protein MSH3 (TAIR:AT4G25540.1); Has 13560 Blast hits to 13453 proteins in 2654 species: Archae - 128; Bacteria - 8942; Metazoa - 734; Fungi - 813; Plants - 457; Viruses - 3; Other Eukaryotes - 2483 (source: NCBI BLink). & (q9xgc9|msh2_maize : 591.0) DNA mismatch repair protein MSH2 (MUS1) - Zea mays (Maize) & (reliability: 1228.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001229.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001299.12","No alias","Cyanophora paradoxa","(at4g31400 : 91.7) Encodes CTF7, a homolog of the yeast CTF protein required for the formation of sister chromatid cohesion. Arabidopsis CTF7 is similar to Saccharomyces cerevisiae CTF7 in that it lacks an  N-terminal extension, exhibits acetyltransferase activity, and can complement a yeast ctf7  temperature-sensitive mutation.  Arabidopsis CTF7 is critical for female gametophyte and embryo development, but not for the establishment of mitotic cohesion during microgametogenesis or during endosperm development.; CTF7; FUNCTIONS IN: damaged DNA binding, DNA-directed DNA polymerase activity; INVOLVED IN: sister chromatid cohesion, embryo sac development, embryo development; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: DNA-repair protein, UmuC-like (InterPro:IPR001126); Has 328 Blast hits to 327 proteins in 141 species: Archae - 0; Bacteria - 2; Metazoa - 149; Fungi - 104; Plants - 43; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (reliability: 183.4) &  (original description: no original description)","protein_coding"
"evm.model.tig00001302.6","No alias","Cyanophora paradoxa","(at3g25100 : 125.0) Required for normal meiosis, may act in the last round of DNA replication prior to meiosis, sequence similar to yeast CDC45; cell division cycle 45 (CDC45); CONTAINS InterPro DOMAIN/s: CDC45-like protein (InterPro:IPR003874); Has 1810 Blast hits to 1657 proteins in 252 species: Archae - 0; Bacteria - 25; Metazoa - 666; Fungi - 449; Plants - 176; Viruses - 35; Other Eukaryotes - 459 (source: NCBI BLink). & (reliability: 250.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001336.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001374.22","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001545.7","No alias","Cyanophora paradoxa","(q9lre6|dpod1_orysa : 1007.0) DNA polymerase delta catalytic subunit (EC 2.7.7.7) - Oryza sativa (Rice) & (at5g63960 : 1000.0) EMBRYO DEFECTIVE 2780 (EMB2780); FUNCTIONS IN: DNA-directed DNA polymerase activity, DNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: DNA replication, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; CONTAINS InterPro DOMAIN/s: DNA polymerase, family B (InterPro:IPR022762), DNA-directed DNA polymerase, family B, exonuclease domain (InterPro:IPR006133), DNA-directed DNA polymerase, family B, conserved region (InterPro:IPR006134), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), DNA-directed DNA polymerase, family B, conserved site (InterPro:IPR017964), DNA-directed DNA polymerase, family B (InterPro:IPR006172), DNA-directed DNA polymerase, family B,  pol2 (InterPro:IPR004578); BEST Arabidopsis thaliana protein match is: recovery protein 3 (TAIR:AT1G67500.2). & (reliability: 2000.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001574.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020531.58","No alias","Cyanophora paradoxa","(at2g23530 : 96.7) Zinc-finger domain of monoamine-oxidase A repressor R1; CONTAINS InterPro DOMAIN/s: Cell division cycle-associated protein (InterPro:IPR018866); BEST Arabidopsis thaliana protein match is: Zinc-finger domain of monoamine-oxidase A repressor R1 (TAIR:AT4G37110.1); Has 512 Blast hits to 506 proteins in 112 species: Archae - 0; Bacteria - 4; Metazoa - 144; Fungi - 73; Plants - 256; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 193.4) &  (original description: no original description)","protein_coding"
"evm.model.tig00020537.14","No alias","Cyanophora paradoxa","(at1g04020 : 90.1) Encodes a protein containing two tandem BRCA1 C-Terminal (BRCT) domains, which function in phosphorylation-dependent proteinñprotein interactions.Loss of function mutations cause defects in meristem organization due to failure to repress WUS. BARD1 binds to WUS promoter and over expression of BARD reduces the extent of WUS expression.; breast cancer associated RING 1 (BARD1); FUNCTIONS IN: transcription coactivator activity, DNA binding; INVOLVED IN: DNA repair, regulation of meristem structural organization, leaf development; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type (InterPro:IPR001965), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: breast cancer susceptibility1 (TAIR:AT4G21070.1); Has 6045 Blast hits to 5706 proteins in 320 species: Archae - 0; Bacteria - 47; Metazoa - 4577; Fungi - 362; Plants - 542; Viruses - 11; Other Eukaryotes - 506 (source: NCBI BLink). & (reliability: 180.2) &  (original description: no original description)","protein_coding"
"evm.model.tig00020537.22","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020537.80","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020553.141","No alias","Cyanophora paradoxa","(q43266|pcna_maize : 272.0) Proliferating cell nuclear antigen (PCNA) - Zea mays (Maize) & (at1g07370 : 265.0) Encodes putative proliferating cell nuclear antigen involved in cell cycle regulation.; proliferating cellular nuclear antigen 1 (PCNA1); CONTAINS InterPro DOMAIN/s: Proliferating cell nuclear antigen, PCNA (InterPro:IPR000730), Proliferating cell nuclear antigen, PCNA, C-terminal (InterPro:IPR022649), Proliferating cell nuclear antigen, PCNA, conserved site (InterPro:IPR022659), Proliferating cell nuclear antigen, PCNA, N-terminal (InterPro:IPR022648); BEST Arabidopsis thaliana protein match is: proliferating cell nuclear antigen 2 (TAIR:AT2G29570.1); Has 1857 Blast hits to 1845 proteins in 456 species: Archae - 391; Bacteria - 0; Metazoa - 315; Fungi - 169; Plants - 159; Viruses - 71; Other Eukaryotes - 752 (source: NCBI BLink). & (reliability: 530.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020553.145","No alias","Cyanophora paradoxa","(at3g54670 : 678.0) Encodes a member of the Arabidopsis cohesin complex that is essential for viability and sister chromatid alignment.; TITAN8 (TTN8); CONTAINS InterPro DOMAIN/s: SMCs flexible hinge (InterPro:IPR010935), RecF/RecN/SMC protein, N-terminal (InterPro:IPR003395); BEST Arabidopsis thaliana protein match is: structural maintenance of chromosome 3 (TAIR:AT5G48600.1). & (reliability: 1356.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020553.90","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020554.125","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020554.132","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020554.16","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020556.23","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020556.69","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020563.196","No alias","Cyanophora paradoxa"," (original description: no original description)","protein_coding"
"evm.model.tig00020610.31","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020614.100","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020614.39","No alias","Cyanophora paradoxa","(at3g19210 : 499.0) Encodes RAD54, a member of the SWI2/SNF2 family of DNA-stimulated ATPases.  Functions in DNA repair via homologous recombination.; homolog of RAD54 (RAD54); FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: DNA repair, response to gamma radiation, double-strand break repair via homologous recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: style (sensu Poaceae), hydathode, root, petiole; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: switch 2 (TAIR:AT1G03750.1). & (q7g8y3|isw2_orysa : 192.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 998.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020616.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020616.20","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020684.26","No alias","Cyanophora paradoxa","(at3g02920 : 90.9) RPA32B; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Replication protein A, subunit RPA32 (InterPro:IPR014646), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Replication protein A, C-terminal (InterPro:IPR014892); BEST Arabidopsis thaliana protein match is: replicon protein A2 (TAIR:AT2G24490.2). & (reliability: 181.8) &  (original description: no original description)","protein_coding"
"evm.model.tig00020685.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020710.116","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020746.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020780.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020801.34","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020801.75","No alias","Cyanophora paradoxa",""(at2g18040 : 117.0) phosphorylation-specific peptidyl prolyl cis/trans isomerase (PPIase) with specificity for phosphoserine-proline bonds; ""peptidylprolyl cis/trans isomerase, NIMA-interacting 1"" (PIN1AT); FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, PpiC-type (InterPro:IPR000297); BEST Arabidopsis thaliana protein match is: FKBP-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT1G26550.1); Has 6394 Blast hits to 6305 proteins in 1691 species: Archae - 14; Bacteria - 4880; Metazoa - 261; Fungi - 147; Plants - 126; Viruses - 0; Other Eukaryotes - 966 (source: NCBI BLink). & (q94g00|pin1_maldo : 116.0) Peptidyl-prolyl cis-trans isomerase 1 (EC 5.2.1.8) (Rotamase Pin1) (PPIase Pin1) (MdPin1) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 234.0) &  (original description: no original description)"","protein_coding"
"evm.model.tig00020848.65","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020848.68","No alias","Cyanophora paradoxa","(at1g67320 : 337.0) DNA primase, large subunit family; FUNCTIONS IN: DNA primase activity; INVOLVED IN: DNA replication, synthesis of RNA primer; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA primase, large subunit, eukaryotic (InterPro:IPR016558), DNA primase, large subunit, eukaryotic/archaeal (InterPro:IPR007238). & (reliability: 674.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020902.41","No alias","Cyanophora paradoxa","(at5g02820 : 489.0) Involved in the patterning and shape of leaf trichomes. Encodes the DNA topoisomerase VI SPO11-3, involved in endoreduplication; ROOT HAIRLESS 2 (RHL2); CONTAINS InterPro DOMAIN/s: Spo11/DNA topoisomerase VI, subunit A, N-terminal (InterPro:IPR013049), DNA topoisomerase VI, subunit A (InterPro:IPR004085), Spo11/DNA topoisomerase VI, subunit A (InterPro:IPR002815); BEST Arabidopsis thaliana protein match is: Spo11/DNA topoisomerase VI, subunit A protein (TAIR:AT3G13170.1); Has 936 Blast hits to 932 proteins in 314 species: Archae - 223; Bacteria - 16; Metazoa - 170; Fungi - 119; Plants - 152; Viruses - 0; Other Eukaryotes - 256 (source: NCBI BLink). & (reliability: 978.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020903.47","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020904.52","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020911.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020918.6","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020943.41","No alias","Cyanophora paradoxa","(at2g25100 : 214.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: ribonuclease H activity, RNA binding, catalytic activity, nucleic acid binding; INVOLVED IN: RNA metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease H2, subunit A (InterPro:IPR004649), Ribonuclease HII/HIII (InterPro:IPR001352), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); Has 6305 Blast hits to 6298 proteins in 2456 species: Archae - 256; Bacteria - 4469; Metazoa - 152; Fungi - 137; Plants - 56; Viruses - 3; Other Eukaryotes - 1232 (source: NCBI BLink). & (reliability: 428.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020943.53","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020943.79","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020961.28","No alias","Cyanophora paradoxa","(at4g35740 : 303.0) Encodes RECQ3, an ATP-dependent helicase.; RecQl3; FUNCTIONS IN: ATP binding, ATP-dependent helicase activity; INVOLVED IN: DNA recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RECQ helicase L2 (TAIR:AT1G31360.1); Has 28158 Blast hits to 28089 proteins in 2765 species: Archae - 286; Bacteria - 16813; Metazoa - 3341; Fungi - 2669; Plants - 1491; Viruses - 10; Other Eukaryotes - 3548 (source: NCBI BLink). & (p46942|db10_nicsy : 90.5) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 580.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020961.65","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021035.22","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021036.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021072.44","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021105.53","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021127.4","No alias","Cyanophora paradoxa","(at3g48150 : 429.0) anaphase-promoting complex or cyclosome subunit; anaphase-promoting complex subunit 8 (APC8); FUNCTIONS IN: binding; INVOLVED IN: cell cycle, regulation of mitotic metaphase/anaphase transition; LOCATED IN: anaphase-promoting complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Cdc23 (InterPro:IPR007192), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G16320.1); Has 14789 Blast hits to 8989 proteins in 1164 species: Archae - 889; Bacteria - 6197; Metazoa - 2204; Fungi - 825; Plants - 603; Viruses - 0; Other Eukaryotes - 4071 (source: NCBI BLink). & (reliability: 858.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021127.96","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021135.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021181.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021234.25","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021254.39","No alias","Cyanophora paradoxa","(at5g59440 : 149.0) Encodes thymidylate kinase which exists in two isoforms in plants. The longer variant of  263 amino acids with a N-terminal extension that is required for localization to the mitochondrion. The second isoform of 224 residues is localized to the cytoplasm and nucleoplasm. Peak of expression occurs during G1/S phase transition.; ZEUS1 (ZEU1); FUNCTIONS IN: thymidylate kinase activity, ATP binding; INVOLVED IN: dTDP biosynthetic process; LOCATED IN: nucleoplasm, mitochondrion, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thymidylate kinase (InterPro:IPR018094), Thymidylate kinase-like (InterPro:IPR000062), Thymidylate kinase, conserved site (InterPro:IPR018095); Has 5505 Blast hits to 5503 proteins in 2206 species: Archae - 247; Bacteria - 3933; Metazoa - 204; Fungi - 151; Plants - 114; Viruses - 143; Other Eukaryotes - 713 (source: NCBI BLink). & (reliability: 298.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021318.39","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021319.28","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021319.67","No alias","Cyanophora paradoxa","(at2g29570 : 310.0) Functionally interacts with POLH to repair DNA damaged by UVB damage.; proliferating cell nuclear antigen 2 (PCNA2); FUNCTIONS IN: DNA binding, DNA polymerase processivity factor activity; INVOLVED IN: regulation of DNA replication, error-prone translesion synthesis; LOCATED IN: PCNA complex, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proliferating cell nuclear antigen, PCNA (InterPro:IPR000730), Proliferating cell nuclear antigen, PCNA, C-terminal (InterPro:IPR022649), Proliferating cell nuclear antigen, PCNA, conserved site (InterPro:IPR022659), Proliferating cell nuclear antigen, PCNA, N-terminal (InterPro:IPR022648); BEST Arabidopsis thaliana protein match is: proliferating cellular nuclear antigen 1 (TAIR:AT1G07370.1); Has 1860 Blast hits to 1848 proteins in 457 species: Archae - 391; Bacteria - 0; Metazoa - 314; Fungi - 169; Plants - 159; Viruses - 73; Other Eukaryotes - 754 (source: NCBI BLink). & (o82134|pcna_pea : 310.0) Proliferating cell nuclear antigen - Pisum sativum (Garden pea) & (reliability: 620.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021350.35","No alias","Cyanophora paradoxa","(at1g78770 : 429.0) anaphase promoting complex 6 (APC6); FUNCTIONS IN: binding; INVOLVED IN: regulation of DNA endoreduplication, phloem or xylem histogenesis, cell cycle; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-3 (InterPro:IPR011716), Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G04240.1); Has 10888 Blast hits to 7341 proteins in 968 species: Archae - 487; Bacteria - 4678; Metazoa - 2008; Fungi - 460; Plants - 439; Viruses - 0; Other Eukaryotes - 2816 (source: NCBI BLink). & (reliability: 858.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021357.12","No alias","Cyanophora paradoxa","(at1g21690 : 315.0) embryo defective 1968 (EMB1968); FUNCTIONS IN: in 6 functions; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: DNA replication factor C complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921), Replication factor C (InterPro:IPR013748); BEST Arabidopsis thaliana protein match is: replication factor C 2 (TAIR:AT1G63160.1). & (reliability: 630.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021462.13","No alias","Cyanophora paradoxa","(at3g54610 : 310.0) Encodes a histone acetyltransferase that is plays a role in the determination of the embryonic root-shoot axis.  It is also required to regulate the floral meristem activity by modulating the extent of expression of WUS and AG.  In other eukaryotes, this protein is recruited to specific promoters by DNA binding transcription factors and is thought to promote transcription by acetylating the N-terminal tail of histone H3. The enzyme has indeed been shown to catalyse primarily the acetylation of H3 histone with only traces of H4 and H2A/B being acetylated. Non-acetylated H3 peptide or an H3 peptide that had been  previously acetylated on K9 both serve as excellent substrates  for HAG1-catalyzed acetylation. However, prior acetylation  of H3 lysine 14 blocks radioactive acetylation of the  peptide by HAG1.  HAG1 is specific for  histone H3 lysine 14.; histone acetyltransferase of the GNAT family 1 (HAG1); FUNCTIONS IN: histone acetyltransferase activity, DNA binding, H3 histone acetyltransferase activity; INVOLVED IN: flower development, histone acetylation, response to light stimulus, positive regulation of transcription, root morphogenesis; LOCATED IN: histone acetyltransferase complex, nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Bromodomain, conserved site (InterPro:IPR018359), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: nuclear protein X1 (TAIR:AT5G63320.1); Has 13698 Blast hits to 5805 proteins in 367 species: Archae - 4; Bacteria - 1437; Metazoa - 4852; Fungi - 1484; Plants - 516; Viruses - 1; Other Eukaryotes - 5404 (source: NCBI BLink). & (reliability: 620.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021489.49","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021582.33","No alias","Cyanophora paradoxa","(at4g37110 : 102.0) Zinc-finger domain of monoamine-oxidase A repressor R1; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Cell division cycle-associated protein (InterPro:IPR018866); BEST Arabidopsis thaliana protein match is: Zinc-finger domain of monoamine-oxidase A repressor R1 (TAIR:AT2G23530.1); Has 452 Blast hits to 447 proteins in 93 species: Archae - 0; Bacteria - 0; Metazoa - 137; Fungi - 54; Plants - 229; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 204.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021612.54","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021621.29","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021720.13","No alias","Cyanophora paradoxa","(p05434|catr_chlre : 256.0) Caltractin (Centrin) (20 kDa calcium-binding protein) - Chlamydomonas reinhardtii & (at3g50360 : 203.0) centrin2 (CEN2); FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: centrin 2 (TAIR:AT4G37010.2); Has 32825 Blast hits to 20606 proteins in 1695 species: Archae - 1; Bacteria - 190; Metazoa - 13563; Fungi - 7187; Plants - 7027; Viruses - 2; Other Eukaryotes - 4855 (source: NCBI BLink). & (reliability: 406.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00022075.57","No alias","Cyanophora paradoxa","(at5g06910 : 139.0) DnaJ homologue, contains J domain which is common in all known DnaJ proteins but missing G/F domain.; J-domain protein 6 (ATJ6); FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT3G12170.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 278.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00022104.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"Glyma.01G000174","No alias","Glycine max","photosystem II stability/assembly factor, chloroplast (HCF136)","protein_coding"
"Glyma.01G004700","No alias","Glycine max","Mnd1 family protein","protein_coding"
"Glyma.01G036600","No alias","Glycine max","C2H2 and C2HC zinc fingers superfamily protein","protein_coding"
"Glyma.01G037600","No alias","Glycine max","formin 8","protein_coding"
"Glyma.01G043400","No alias","Glycine max","Cystathionine beta-synthase (CBS) protein","protein_coding"
"Glyma.01G084600","No alias","Glycine max","Eukaryotic aspartyl protease family protein","protein_coding"
"Glyma.01G158150","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.01G188766","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.01G197300","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.02G031000","No alias","Glycine max","nucleobase-ascorbate transporter 7","protein_coding"
"Glyma.02G079900","No alias","Glycine max","DHHC-type zinc finger family protein","protein_coding"
"Glyma.02G080700","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.02G095600","No alias","Glycine max","ARABIDOPSIS TRITHORAX-RELATED PROTEIN 6","protein_coding"
"Glyma.02G106600","No alias","Glycine max","origin recognition complex protein 6","protein_coding"
"Glyma.02G107300","No alias","Glycine max","zinc finger homeodomain  1","protein_coding"
"Glyma.02G114600","No alias","Glycine max","glucuronidase 1","protein_coding"
"Glyma.02G151800","No alias","Glycine max","Rho GTPase activating protein with PAK-box/P21-Rho-binding domain","protein_coding"
"Glyma.02G202600","No alias","Glycine max","LJRHL1-like 2","protein_coding"
"Glyma.02G206200","No alias","Glycine max","Protein of unknown function, DUF593","protein_coding"
"Glyma.02G209900","No alias","Glycine max","pyrophosphorylase 3","protein_coding"
"Glyma.02G253800","No alias","Glycine max","Glycosyl hydrolase superfamily protein","protein_coding"
"Glyma.02G264500","No alias","Glycine max","LOB domain-containing protein 21","protein_coding"
"Glyma.02G286600","No alias","Glycine max","DNA primases;DNA primases","protein_coding"
"Glyma.02G304300","No alias","Glycine max","proliferating cellular nuclear antigen 1","protein_coding"
"Glyma.03G007300","No alias","Glycine max","frataxin homolog","protein_coding"
"Glyma.03G021600","No alias","Glycine max","cytochrome P450, family 704, subfamily A, polypeptide 2","protein_coding"
"Glyma.03G028000","No alias","Glycine max","Arginase/deacetylase superfamily protein","protein_coding"
"Glyma.03G088500","No alias","Glycine max","RNA polymerase II, Rpb4, core protein","protein_coding"
"Glyma.03G088600","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.03G111400","No alias","Glycine max","ARM repeat superfamily protein","protein_coding"
"Glyma.03G118700","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.03G171500","No alias","Glycine max","cation/H+ exchanger 20","protein_coding"
"Glyma.03G177400","No alias","Glycine max","Ribosomal protein L4/L1 family","protein_coding"
"Glyma.03G201100","No alias","Glycine max","Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family","protein_coding"
"Glyma.03G219200","No alias","Glycine max","Minichromosome maintenance (MCM2/3/5) family protein","protein_coding"
"Glyma.03G237700","No alias","Glycine max","cyclin family","protein_coding"
"Glyma.04G033100","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.04G075900","No alias","Glycine max","Peptidyl-tRNA hydrolase II (PTH2) family protein","protein_coding"
"Glyma.04G132000","No alias","Glycine max","Protein kinase superfamily protein","protein_coding"
"Glyma.04G158400","No alias","Glycine max","transducin family protein / WD-40 repeat family protein","protein_coding"
"Glyma.04G174467","No alias","Glycine max","homeobox protein 5","protein_coding"
"Glyma.04G210700","No alias","Glycine max","DNA binding;nucleotide binding;nucleic acid binding;DNA-directed DNA polymerases;DNA-directed DNA polymerases","protein_coding"
"Glyma.04G250200","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.05G021900","No alias","Glycine max","Cytochrome P450 superfamily protein","protein_coding"
"Glyma.05G028700","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.05G064600","No alias","Glycine max","Plant VAMP (vesicle-associated membrane protein) family protein","protein_coding"
"Glyma.05G115000","No alias","Glycine max","GTP-binding 2","protein_coding"
"Glyma.05G129700","No alias","Glycine max","Minichromosome maintenance (MCM2/3/5) family protein","protein_coding"
"Glyma.05G148900","No alias","Glycine max","DNA primase, large subunit family","protein_coding"
"Glyma.05G150500","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.05G173100","No alias","Glycine max","ribosomal protein-related","protein_coding"
"Glyma.05G186000","No alias","Glycine max","TSL-kinase interacting protein 1","protein_coding"
"Glyma.05G192000","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.05G216000","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.05G234800","No alias","Glycine max","Ribosomal protein S19 family protein","protein_coding"
"Glyma.05G237600","No alias","Glycine max","Protein of unknown function (DUF1639)","protein_coding"
"Glyma.06G033100","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.06G074140","No alias","Glycine max","zinc ion binding","protein_coding"
"Glyma.06G116400","No alias","Glycine max","amino acid permease 3","protein_coding"
"Glyma.06G143400","No alias","Glycine max","E2F target gene 1","protein_coding"
"Glyma.06G144300","No alias","Glycine max","PAP/OAS1 substrate-binding domain superfamily","protein_coding"
"Glyma.06G163700","No alias","Glycine max","Integrase-type DNA-binding superfamily protein","protein_coding"
"Glyma.06G169800","No alias","Glycine max","Pyridoxal phosphate (PLP)-dependent transferases superfamily protein","protein_coding"
"Glyma.06G177600","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.06G179000","No alias","Glycine max","tryptophan aminotransferase related 2","protein_coding"
"Glyma.06G183400","No alias","Glycine max","polygalacturonase 2","protein_coding"
"Glyma.06G234500","No alias","Glycine max","RING/U-box superfamily protein","protein_coding"
"Glyma.06G282500","No alias","Glycine max","SAUR-like auxin-responsive protein family","protein_coding"
"Glyma.07G005000","No alias","Glycine max","RAD3-like DNA-binding helicase protein","protein_coding"
"Glyma.07G007000","No alias","Glycine max","lipoxygenase 1","protein_coding"
"Glyma.07G034800","No alias","Glycine max","lipoxygenase 1","protein_coding"
"Glyma.07G043800","No alias","Glycine max","40s ribosomal protein SA B","protein_coding"
"Glyma.07G113400","No alias","Glycine max","Protein prenylyltransferase superfamily protein","protein_coding"
"Glyma.07G139900","No alias","Glycine max","glutathione S-transferase tau 7","protein_coding"
"Glyma.07G141250","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.07G238400","No alias","Glycine max","minichromosome maintenance (MCM2/3/5) family protein","protein_coding"
"Glyma.07G240200","No alias","Glycine max","Nucleic acid-binding proteins superfamily","protein_coding"
"Glyma.08G031600","No alias","Glycine max","SNARE-like superfamily protein","protein_coding"
"Glyma.08G048700","No alias","Glycine max","transmembrane kinase 1","protein_coding"
"Glyma.08G107400","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.08G130400","No alias","Glycine max","ribosomal protein-related","protein_coding"
"Glyma.08G155000","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.08G155900","No alias","Glycine max","telomerase reverse transcriptase","protein_coding"
"Glyma.08G169300","No alias","Glycine max","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein","protein_coding"
"Glyma.08G174400","No alias","Glycine max","Protein kinase superfamily protein","protein_coding"
"Glyma.08G203100","No alias","Glycine max","phytochrome-associated protein 2","protein_coding"
"Glyma.08G306900","No alias","Glycine max","glutathione S-transferase PHI 9","protein_coding"
"Glyma.08G320900","No alias","Glycine max","NAD(P)-binding Rossmann-fold superfamily protein","protein_coding"
"Glyma.08G334900","No alias","Glycine max","proliferating cell nuclear antigen 2","protein_coding"
"Glyma.09G000700","No alias","Glycine max","ribosomal protein 1","protein_coding"
"Glyma.09G035000","No alias","Glycine max","GDSL-like Lipase/Acylhydrolase superfamily protein","protein_coding"
"Glyma.09G047300","No alias","Glycine max","minichromosome maintenance (MCM2/3/5) family protein","protein_coding"
"Glyma.09G133100","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.09G140600","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.09G244000","No alias","Glycine max","WRKY family transcription factor","protein_coding"
"Glyma.09G266700","No alias","Glycine max","early nodulin-like protein 18","protein_coding"
"Glyma.10G010700","No alias","Glycine max","gibberellin 2-oxidase 6","protein_coding"
"Glyma.10G035700","No alias","Glycine max","homolog of yeast CDT1 A","protein_coding"
"Glyma.10G159700","No alias","Glycine max","cysteine synthase D1","protein_coding"
"Glyma.10G193200","No alias","Glycine max","heat shock protein 60","protein_coding"
"Glyma.10G217000","No alias","Glycine max","calcium-dependent protein kinase 4","protein_coding"
"Glyma.10G227900","No alias","Glycine max","timeless family protein","protein_coding"
"Glyma.10G240800","No alias","Glycine max","pfkB-like carbohydrate kinase family protein","protein_coding"
"Glyma.10G274600","No alias","Glycine max","Integrase-type DNA-binding superfamily protein","protein_coding"
"Glyma.10G286800","No alias","Glycine max","GRAM domain-containing protein / ABA-responsive protein-related","protein_coding"
"Glyma.11G019000","No alias","Glycine max","cytokinin response factor 2","protein_coding"
"Glyma.11G027500","No alias","Glycine max","FIZZY-related 2","protein_coding"
"Glyma.11G038200","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.11G048366","No alias","Glycine max","ARM repeat superfamily protein","protein_coding"
"Glyma.11G059500","No alias","Glycine max","methyl esterase 3","protein_coding"
"Glyma.11G076500","No alias","Glycine max","Homeodomain-like superfamily protein","protein_coding"
"Glyma.11G099800","No alias","Glycine max","zinc knuckle (CCHC-type) family protein","protein_coding"
"Glyma.11G113300","No alias","Glycine max","Minichromosome maintenance (MCM2/3/5) family protein","protein_coding"
"Glyma.11G143400","No alias","Glycine max","ribosomal protein L23AB","protein_coding"
"Glyma.11G170601","No alias","Glycine max","cleavage and polyadenylation specificity factor 100","protein_coding"
"Glyma.11G193300","No alias","Glycine max","Shugoshin C terminus","protein_coding"
"Glyma.11G242500","No alias","Glycine max","RING/U-box superfamily protein","protein_coding"
"Glyma.11G247900","No alias","Glycine max","DNA polymerase alpha 2","protein_coding"
"Glyma.12G025700","No alias","Glycine max","zinc knuckle (CCHC-type) family protein","protein_coding"
"Glyma.12G039200","No alias","Glycine max","Minichromosome maintenance (MCM2/3/5) family protein","protein_coding"
"Glyma.12G140400","No alias","Glycine max","S-locus lectin protein kinase family protein","protein_coding"
"Glyma.12G155700","No alias","Glycine max","SPA1-related 3","protein_coding"
"Glyma.12G164000","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.12G190500","No alias","Glycine max","Plant-specific transcription factor YABBY family protein","protein_coding"
"Glyma.13G043200","No alias","Glycine max","light-mediated development protein 1 / deetiolated1 (DET1)","protein_coding"
"Glyma.13G045800","No alias","Glycine max","Ribosomal protein S7e family protein","protein_coding"
"Glyma.13G051500","No alias","Glycine max","alpha/beta-Hydrolases superfamily protein","protein_coding"
"Glyma.13G088300","No alias","Glycine max","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein","protein_coding"
"Glyma.13G096925","No alias","Glycine max","pseudo-response regulator 7","protein_coding"
"Glyma.13G107200","No alias","Glycine max","zinc ion binding","protein_coding"
"Glyma.13G115000","No alias","Glycine max","RAS associated with diabetes protein 51","protein_coding"
"Glyma.13G152440","No alias","Glycine max","transcription factor-related","protein_coding"
"Glyma.13G156300","No alias","Glycine max","DROUGHT SENSITIVE 1","protein_coding"
"Glyma.13G156400","No alias","Glycine max","Minichromosome maintenance (MCM2/3/5) family protein","protein_coding"
"Glyma.13G196200","No alias","Glycine max","Eukaryotic aspartyl protease family protein","protein_coding"
"Glyma.13G203200","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.13G214200","No alias","Glycine max","BRCT domain-containing DNA repair protein","protein_coding"
"Glyma.13G230400","No alias","Glycine max","ARM repeat superfamily protein","protein_coding"
"Glyma.13G234000","No alias","Glycine max","Transcriptional coactivator/pterin dehydratase","protein_coding"
"Glyma.13G240500","No alias","Glycine max","allantoinase","protein_coding"
"Glyma.13G243100","No alias","Glycine max","Translation protein SH3-like family protein","protein_coding"
"Glyma.13G256000","No alias","Glycine max","Cox19-like CHCH family protein","protein_coding"
"Glyma.13G280500","No alias","Glycine max","purple acid phosphatase 10","protein_coding"
"Glyma.13G305600","No alias","Glycine max","uclacyanin 1","protein_coding"
"Glyma.13G313700","No alias","Glycine max","Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family","protein_coding"
"Glyma.13G325600","No alias","Glycine max","dsRNA-binding protein 2","protein_coding"
"Glyma.13G340400","No alias","Glycine max","RING/U-box superfamily protein","protein_coding"
"Glyma.14G009500","No alias","Glycine max","proliferating cell nuclear antigen 2","protein_coding"
"Glyma.14G023700","No alias","Glycine max","OTU-like cysteine protease family protein","protein_coding"
"Glyma.14G053000","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.14G056100","No alias","Glycine max","laccase 5","protein_coding"
"Glyma.14G069700","No alias","Glycine max","RHD SIX-LIKE 1","protein_coding"
"Glyma.14G097000","No alias","Glycine max","IQ-domain 6","protein_coding"
"Glyma.14G165700","No alias","Glycine max","MAPK/ERK kinase kinase 1","protein_coding"
"Glyma.15G048200","No alias","Glycine max","Ribosomal protein L10 family protein","protein_coding"
"Glyma.15G068500","No alias","Glycine max","Translation protein SH3-like family protein","protein_coding"
"Glyma.15G072800","No alias","Glycine max","fatty acid desaturase family protein","protein_coding"
"Glyma.15G101800","No alias","Glycine max","Terpenoid cyclases family protein","protein_coding"
"Glyma.15G157700","No alias","Glycine max","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding"
"Glyma.15G200100","No alias","Glycine max","PLATZ transcription factor family protein","protein_coding"
"Glyma.15G226200","No alias","Glycine max","beta galactosidase 9","protein_coding"
"Glyma.16G000900","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.16G064200","No alias","Glycine max","Leucine-rich repeat receptor-like protein kinase family protein","protein_coding"
"Glyma.16G094000","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.16G156500","No alias","Glycine max","forkhead-associated (FHA) domain-containing protein","protein_coding"
"Glyma.16G177900","No alias","Glycine max","Heavy metal transport/detoxification superfamily protein","protein_coding"
"Glyma.16G206200","No alias","Glycine max","HSP20-like chaperones superfamily protein","protein_coding"
"Glyma.17G016600","No alias","Glycine max","Eukaryotic aspartyl protease family protein","protein_coding"
"Glyma.17G019500","No alias","Glycine max","UDP-glucosyl transferase 73B3","protein_coding"
"Glyma.17G029800","No alias","Glycine max","transducin family protein / WD-40 repeat family protein","protein_coding"
"Glyma.17G035000","No alias","Glycine max","minichromosome maintenance (MCM2/3/5) family protein","protein_coding"
"Glyma.17G036500","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.17G098700","No alias","Glycine max","end binding protein 1B","protein_coding"
"Glyma.17G102500","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.17G104000","No alias","Glycine max","Minichromosome maintenance (MCM2/3/5) family protein","protein_coding"
"Glyma.17G207700","No alias","Glycine max","HCO3- transporter family","protein_coding"
"Glyma.18G009300","No alias","Glycine max","DNA polymerase alpha 2","protein_coding"
"Glyma.18G050200","No alias","Glycine max","Protein of unknown function (DUF1191)","protein_coding"
"Glyma.18G067800","No alias","Glycine max","proliferating cell nuclear antigen 2","protein_coding"
"Glyma.18G071300","No alias","Glycine max","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"Glyma.18G081000","No alias","Glycine max","CCCH-type zinc fingerfamily protein with RNA-binding domain","protein_coding"
"Glyma.18G181800","No alias","Glycine max","RHOMBOID-like 1","protein_coding"
"Glyma.18G184800","No alias","Glycine max","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein","protein_coding"
"Glyma.18G230500","No alias","Glycine max","Remorin family protein","protein_coding"
"Glyma.18G291700","No alias","Glycine max","Heavy metal transport/detoxification superfamily protein","protein_coding"
"Glyma.19G028600","No alias","Glycine max","TPX2 (targeting protein for Xklp2) protein family","protein_coding"
"Glyma.19G098500","No alias","Glycine max","senescence-related gene 3","protein_coding"
"Glyma.19G161300","No alias","Glycine max","RNI-like superfamily protein","protein_coding"
"Glyma.19G190667","No alias","Glycine max","pentatricopeptide (PPR) repeat-containing protein","protein_coding"
"Glyma.19G216100","No alias","Glycine max","Minichromosome maintenance (MCM2/3/5) family protein","protein_coding"
"Glyma.19G249000","No alias","Glycine max","rotamase cyclophilin 2","protein_coding"
"Glyma.20G101800","No alias","Glycine max","GRAM domain-containing protein / ABA-responsive protein-related","protein_coding"
"Glyma.20G141200","No alias","Glycine max","gibberellin 2-oxidase 8","protein_coding"
"Glyma.20G147200","No alias","Glycine max","C-8 sterol isomerases","protein_coding"
"Glyma.20G185100","No alias","Glycine max","RNI-like superfamily protein","protein_coding"
"Glyma.20G186867","No alias","Glycine max","Major facilitator superfamily protein","protein_coding"
"Glyma.20G195300","No alias","Glycine max","Mitochondrial substrate carrier family protein","protein_coding"
"Glyma.20G197100","No alias","Glycine max","heat shock protein 60","protein_coding"
"Glyma.20G197700","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.U031110","No alias","Glycine max","Auxin-responsive GH3 family protein","protein_coding"
"GRMZM2G000753","No alias","Zea mays","RING/U-box superfamily protein","protein_coding"
"GRMZM2G002396","No alias","Zea mays","Uncharacterised protein family (UPF0497)","protein_coding"
"GRMZM2G005452","No alias","Zea mays","NB-ARC domain-containing disease resistance protein","protein_coding"
"GRMZM2G006246","No alias","Zea mays","nijmegen breakage syndrome 1","protein_coding"
"GRMZM2G006530","No alias","Zea mays","homolog of yeast sucrose nonfermenting 4","protein_coding"
"GRMZM2G007258","No alias","Zea mays","titan9","protein_coding"
"GRMZM2G010488","No alias","Zea mays","U-box domain-containing protein kinase family protein","protein_coding"
"GRMZM2G012123","No alias","Zea mays","Sterile alpha motif (SAM) domain-containing protein","protein_coding"
"GRMZM2G019251","No alias","Zea mays","RNA-binding (RRM/RBD/RNP motifs) family protein","protein_coding"
"GRMZM2G022787","No alias","Zea mays","Pentatricopeptide repeat (PPR-like) superfamily protein","protein_coding"
"GRMZM2G023992","No alias","Zea mays","Reticulon family protein","protein_coding"
"GRMZM2G026676","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G028730","No alias","Zea mays","Uncharacterised protein family (UPF0172)","protein_coding"
"GRMZM2G029951","No alias","Zea mays","heavy metal atpase 5","protein_coding"
"GRMZM2G029979","No alias","Zea mays","bZIP transcription factor family protein","protein_coding"
"GRMZM2G030523","No alias","Zea mays","proliferating cell nuclear antigen 2","protein_coding"
"GRMZM2G034389","No alias","Zea mays","peptide transporter 2","protein_coding"
"GRMZM2G034835","No alias","Zea mays","Pectin lyase-like superfamily protein","protein_coding"
"GRMZM2G036025","No alias","Zea mays","PDI-like 1-2","protein_coding"
"GRMZM2G037614","No alias","Zea mays","Transketolase family protein","protein_coding"
"GRMZM2G039848","No alias","Zea mays","alpha/beta-Hydrolases superfamily protein","protein_coding"
"GRMZM2G041518","No alias","Zea mays","hercules receptor kinase 2","protein_coding"
"GRMZM2G041729","No alias","Zea mays","Calcium-binding EF-hand family protein","protein_coding"
"GRMZM2G042741","No alias","Zea mays","SAUR-like auxin-responsive protein family","protein_coding"
"GRMZM2G044317","No alias","Zea mays","DNA primase, large subunit family","protein_coding"
"GRMZM2G044481","No alias","Zea mays","Terpenoid cyclases/Protein prenyltransferases superfamily protein","protein_coding"
"GRMZM2G057571","No alias","Zea mays","zinc knuckle (CCHC-type) family protein","protein_coding"
"GRMZM2G059877","No alias","Zea mays","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"GRMZM2G061485","No alias","Zea mays","replicon protein A2","protein_coding"
"GRMZM2G065655","No alias","Zea mays","cysteine-rich RLK (RECEPTOR-like protein kinase) 20","protein_coding"
"GRMZM2G066480","No alias","Zea mays","Plant transposase (Ptta/En/Spm family)","protein_coding"
"GRMZM2G066950","No alias","Zea mays","Plant invertase/pectin methylesterase inhibitor superfamily protein","protein_coding"
"GRMZM2G068255","No alias","Zea mays","RNA-binding (RRM/RBD/RNP motifs) family protein","protein_coding"
"GRMZM2G070761","No alias","Zea mays","senescence-associated gene 12","protein_coding"
"GRMZM2G075158","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G076034","No alias","Zea mays","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"GRMZM2G085916","No alias","Zea mays","glutathione synthetase 2","protein_coding"
"GRMZM2G090269","No alias","Zea mays","RING/U-box superfamily protein","protein_coding"
"GRMZM2G090505","No alias","Zea mays","Caleosin-related family protein","protein_coding"
"GRMZM2G092661","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G093079","No alias","Zea mays","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"GRMZM2G093945","No alias","Zea mays","Galactose mutarotase-like superfamily protein","protein_coding"
"GRMZM2G097641","No alias","Zea mays","Sucrose-6F-phosphate phosphohydrolase family protein","protein_coding"
"GRMZM2G099502","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G106683","No alias","Zea mays","carboxypeptidase D, putative","protein_coding"
"GRMZM2G107737","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G108153","No alias","Zea mays","Peroxidase superfamily protein","protein_coding"
"GRMZM2G108384","No alias","Zea mays","DHHC-type zinc finger family protein","protein_coding"
"GRMZM2G108712","No alias","Zea mays","proliferating cell nuclear antigen 2","protein_coding"
"GRMZM2G125156","No alias","Zea mays","related to KPC1","protein_coding"
"GRMZM2G126079","No alias","Zea mays","NSP (nuclear shuttle protein)-interacting GTPase","protein_coding"
"GRMZM2G126900","No alias","Zea mays","myo-inositol oxygenase 1","protein_coding"
"GRMZM2G127294","No alias","Zea mays","lysine histidine transporter 1","protein_coding"
"GRMZM2G129620","No alias","Zea mays","Nucleotide-diphospho-sugar transferases superfamily protein","protein_coding"
"GRMZM2G130904","No alias","Zea mays","Peroxidase superfamily protein","protein_coding"
"GRMZM2G133275","No alias","Zea mays","Lactoylglutathione lyase / glyoxalase I family protein","protein_coding"
"GRMZM2G135052","No alias","Zea mays","Homeodomain-like superfamily protein","protein_coding"
"GRMZM2G141859","No alias","Zea mays","pol-like 5","protein_coding"
"GRMZM2G141975","No alias","Zea mays","oligopeptide transporter 4","protein_coding"
"GRMZM2G144716","No alias","Zea mays","NADH:ubiquinone oxidoreductase intermediate-associated protein 30","protein_coding"
"GRMZM2G146711","No alias","Zea mays","exocyst subunit exo70 family protein G1","protein_coding"
"GRMZM2G146761","No alias","Zea mays","rRNA processing protein-related","protein_coding"
"GRMZM2G149273","No alias","Zea mays","Peroxidase superfamily protein","protein_coding"
"GRMZM2G155380","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G156246","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G159739","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G168886","No alias","Zea mays","anaphase-promoting complex/cyclosome 2","protein_coding"
"GRMZM2G171373","No alias","Zea mays","hexokinase 1","protein_coding"
"GRMZM2G306945","No alias","Zea mays","succinate dehydrogenase 1-1","protein_coding"
"GRMZM2G310175","No alias","Zea mays","phosphate transporter 1;3","protein_coding"
"GRMZM2G315072","No alias","Zea mays","XB3 ortholog 2 in Arabidopsis thaliana","protein_coding"
"GRMZM2G327051","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G363377","No alias","Zea mays","Sec14p-like phosphatidylinositol transfer family protein","protein_coding"
"GRMZM2G363530","No alias","Zea mays","structural molecules","protein_coding"
"GRMZM2G364129","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G365282","No alias","Zea mays","cysteine-rich RLK (RECEPTOR-like protein kinase) 25","protein_coding"
"GRMZM2G369884","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G371276","No alias","Zea mays","SOS3-interacting protein 1","protein_coding"
"GRMZM2G378301","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G426275","No alias","Zea mays","alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase, putative","protein_coding"
"GRMZM2G452896","No alias","Zea mays","alpha/beta-Hydrolases superfamily protein","protein_coding"
"GRMZM2G465764","No alias","Zea mays","glucan synthase-like 7","protein_coding"
"GRMZM2G475956","No alias","Zea mays","Arabidopsis protein of unknown function (DUF241)","protein_coding"
"GRMZM2G478876","No alias","Zea mays","Protein kinase superfamily protein","protein_coding"
"GRMZM2G495337","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G500685","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G504175","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G510565","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G541772","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM5G820188","No alias","Zea mays","thioredoxin family protein","protein_coding"
"GRMZM5G829738","No alias","Zea mays","CTC-interacting domain 4","protein_coding"
"GRMZM5G854613","No alias","Zea mays","Enoyl-CoA hydratase/isomerase family","protein_coding"
"GRMZM5G862219","No alias","Zea mays","acyl-CoA oxidase 4","protein_coding"
"GRMZM5G863076","No alias","Zea mays","Uncharacterised protein family (UPF0497)","protein_coding"
"GRMZM5G865047","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM6G748133","No alias","Zea mays","chitin elicitor receptor kinase 1","protein_coding"
"HORVU0Hr1G004410.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU0Hr1G005590.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU0Hr1G015600.1","No alias","Hordeum vulgare","EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen","protein_coding"
"HORVU0Hr1G022100.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU0Hr1G022320.1","No alias","Hordeum vulgare","metabolite transporter *(DTX)","protein_coding"
"HORVU0Hr1G026500.1","No alias","Hordeum vulgare","component *(Tim13) of inner mitochondrion membrane TIM22 insertion system","protein_coding"
"HORVU0Hr1G031140.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU0Hr1G038360.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G003270.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G011080.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G013660.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G014640.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G020310.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G026780.1","No alias","Hordeum vulgare","regulatory protein *(FLZ) of SnRK1 complex","protein_coding"
"HORVU1Hr1G028330.1","No alias","Hordeum vulgare","component *(KAE1) of tRNA N6-threonylcarbamoylation KEOPS/EKC complex","protein_coding"
"HORVU1Hr1G037820.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G039160.1","No alias","Hordeum vulgare","component *(uL14) of large ribosomal-subunit (LSU) proteome","protein_coding"
"HORVU1Hr1G043790.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G043980.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G054110.3","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G055570.4","No alias","Hordeum vulgare","component *(WDR8) of Katanin-recruiting microtubule-anchoring complex","protein_coding"
"HORVU1Hr1G058140.1","No alias","Hordeum vulgare","membrane-anchor component *(SDH4) of succinate dehydrogenase complex","protein_coding"
"HORVU1Hr1G058480.3","No alias","Hordeum vulgare","pre-60S ribosomal subunit assembly factor *(NOP16)","protein_coding"
"HORVU1Hr1G060150.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G061140.3","No alias","Hordeum vulgare","proton-translocating pyrophosphatase *(VHP1) & proton-translocating pyrophosphatase *(VHP1)","protein_coding"
"HORVU1Hr1G061760.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G064050.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G065140.2","No alias","Hordeum vulgare","sliding clamp protein *(PCNA)","protein_coding"
"HORVU1Hr1G065480.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G065500.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G065510.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G069130.1","No alias","Hordeum vulgare","EC_1.10 oxidoreductase acting on diphenol or related substance as donor","protein_coding"
"HORVU1Hr1G070080.2","No alias","Hordeum vulgare","EPF/EPFL precursor polypeptide","protein_coding"
"HORVU1Hr1G083580.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G083710.2","No alias","Hordeum vulgare","component *(RACK1) of small ribosomal-subunit (SSU) proteome","protein_coding"
"HORVU1Hr1G084700.5","No alias","Hordeum vulgare","helicase component *(RVB) of chromatin remodeling complex & helicase component *(RVB)","protein_coding"
"HORVU1Hr1G087690.8","No alias","Hordeum vulgare","component *(eS31) of small ribosomal-subunit (SSU) proteome","protein_coding"
"HORVU2Hr1G000890.1","No alias","Hordeum vulgare","EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen","protein_coding"
"HORVU2Hr1G006900.1","No alias","Hordeum vulgare","cyclopropane fatty acid synthase","protein_coding"
"HORVU2Hr1G007610.3","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G012710.2","No alias","Hordeum vulgare","copper-containing amine oxidase *(CuAO) & EC_1.4 oxidoreductase acting on CH-NH2 group of donor","protein_coding"
"HORVU2Hr1G012760.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G014010.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G015160.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G016630.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G021270.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G022490.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G030400.3","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G031110.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G031120.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G034610.2","No alias","Hordeum vulgare","regulatory protein *(GOT1) of COPII coatomer machinery","protein_coding"
"HORVU2Hr1G037940.1","No alias","Hordeum vulgare","component *(uS15) of small ribosomal-subunit (SSU) proteome","protein_coding"
"HORVU2Hr1G043310.10","No alias","Hordeum vulgare","translation peptide chain release factor *(PrfB)","protein_coding"
"HORVU2Hr1G053290.6","No alias","Hordeum vulgare","component *(eS12) of small ribosomal-subunit (SSU) proteome","protein_coding"
"HORVU2Hr1G059490.1","No alias","Hordeum vulgare","E3 ubiquitin ligase *(SIS3)","protein_coding"
"HORVU2Hr1G060310.5","No alias","Hordeum vulgare","alpha-type-4 component *(PAD) of 26S proteasome & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding"
"HORVU2Hr1G066820.4","No alias","Hordeum vulgare","EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding"
"HORVU2Hr1G075910.13","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G079510.9","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G081450.2","No alias","Hordeum vulgare","associated component *(POT) of telomerase ribonucleoprotein complex","protein_coding"
"HORVU2Hr1G084680.6","No alias","Hordeum vulgare","translation ribosome recycling factor *(RRF)","protein_coding"
"HORVU2Hr1G088030.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G095220.3","No alias","Hordeum vulgare","component *(RFC2) of PCNA sliding clamp loader complex","protein_coding"
"HORVU2Hr1G107540.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G112020.1","No alias","Hordeum vulgare","EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"HORVU2Hr1G112050.5","No alias","Hordeum vulgare","RLCK-VI receptor-like protein kinase & interactive protein kinase of ROP-GTPase activity *(RBK/RRK) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"HORVU2Hr1G117060.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G117220.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G117260.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G121340.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G123890.5","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G011160.1","No alias","Hordeum vulgare","Trihelix-type transcription factor","protein_coding"
"HORVU3Hr1G015530.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G015810.1","No alias","Hordeum vulgare","histone *(H2B)","protein_coding"
"HORVU3Hr1G017940.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G018130.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G021640.1","No alias","Hordeum vulgare","subunit beta of NAC ribosome-associated chaperone complex","protein_coding"
"HORVU3Hr1G023160.3","No alias","Hordeum vulgare","component *(TRM11) of TRM11-TRM112 tRNA guanosine-methyltransferase complex","protein_coding"
"HORVU3Hr1G026060.1","No alias","Hordeum vulgare","component *(uL5) of large ribosomal-subunit (LSU) proteome","protein_coding"
"HORVU3Hr1G030640.21","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G033560.2","No alias","Hordeum vulgare","EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding"
"HORVU3Hr1G033630.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G038050.2","No alias","Hordeum vulgare","subunit B of DNA gyrase complex","protein_coding"
"HORVU3Hr1G044700.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G050640.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G050680.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G055700.1","No alias","Hordeum vulgare","uroporphyrinogen III decarboxylase *(HEME) & EC_4.1 carbon-carbon lyase","protein_coding"
"HORVU3Hr1G056990.2","No alias","Hordeum vulgare","beta-type carbonic anhydrase","protein_coding"
"HORVU3Hr1G069700.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G070040.3","No alias","Hordeum vulgare","RNA editing factor *(MEF8) & RNA editing factor *(DYW2)","protein_coding"
"HORVU3Hr1G073300.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G078830.2","No alias","Hordeum vulgare","protein involved in cytochrome b6/f complex assembly *(DAC)","protein_coding"
"HORVU3Hr1G080130.4","No alias","Hordeum vulgare","component *(eL24) of large ribosomal-subunit (LSU) proteome","protein_coding"
"HORVU3Hr1G081380.4","No alias","Hordeum vulgare","E3 ubiquitin ligase","protein_coding"
"HORVU3Hr1G085630.11","No alias","Hordeum vulgare","inositol phosphorylceramide synthase *(IPCS)","protein_coding"
"HORVU3Hr1G087610.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G090350.1","No alias","Hordeum vulgare","large subunit of TFIIIf transcription factor module","protein_coding"
"HORVU3Hr1G093030.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G098320.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G099360.6","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G105820.5","No alias","Hordeum vulgare","recombinase *(RecA)","protein_coding"
"HORVU3Hr1G106440.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G109220.2","No alias","Hordeum vulgare","calcium sensor *(CML)","protein_coding"
"HORVU4Hr1G014130.1","No alias","Hordeum vulgare","component *(eS27) of small ribosomal-subunit (SSU) proteome","protein_coding"
"HORVU4Hr1G015370.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G016840.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G021550.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G023580.5","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G026330.2","No alias","Hordeum vulgare","substrate adaptor *(HTD1/DWD1) of CUL4-based E3 ubiquitin ligase complex","protein_coding"
"HORVU4Hr1G029150.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G033170.1","No alias","Hordeum vulgare","component *(VIP3/SKI8) of PAF1C transcription initiation and elongation complex & component *(SKI8/VIP3) of SUPERKILLER regulation complex","protein_coding"
"HORVU4Hr1G033620.3","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G036350.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G042240.2","No alias","Hordeum vulgare","galacturonosyltransferase","protein_coding"
"HORVU4Hr1G062820.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G074650.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G078450.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G078800.2","No alias","Hordeum vulgare","methylation reader component *(ING1)","protein_coding"
"HORVU4Hr1G079150.11","No alias","Hordeum vulgare","potassium cation transporter *(HAK/KUP/KT)","protein_coding"
"HORVU4Hr1G084190.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G084910.3","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G086460.3","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G005550.1","No alias","Hordeum vulgare","maturase *(MatK)","protein_coding"
"HORVU5Hr1G007210.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G019140.5","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G022220.2","No alias","Hordeum vulgare","component *(NPG) of phosphatidylinositol 4-kinase complex","protein_coding"
"HORVU5Hr1G022710.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G039650.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G040320.1","No alias","Hordeum vulgare","transcriptional co-regulator *(OFP)","protein_coding"
"HORVU5Hr1G040910.1","No alias","Hordeum vulgare","subunit beta of NAC ribosome-associated chaperone complex","protein_coding"
"HORVU5Hr1G041060.2","No alias","Hordeum vulgare","peptidyl-prolyl cis-trans isomerase *(TWD)","protein_coding"
"HORVU5Hr1G044480.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G047240.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G048660.10","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G052880.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G056820.4","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G069870.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G074040.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G100700.3","No alias","Hordeum vulgare","aminoacyl-tRNA binding factor *(eEF1A))","protein_coding"
"HORVU5Hr1G100770.1","No alias","Hordeum vulgare","actin-depolymerizing factor","protein_coding"
"HORVU5Hr1G104300.2","No alias","Hordeum vulgare","component *(APC10) of (APC/C)-dependent ubiquitination catalytic core subcomplex","protein_coding"
"HORVU5Hr1G111810.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G115500.3","No alias","Hordeum vulgare","regulatory factor *(NRT3) of nitrate uptake system","protein_coding"
"HORVU5Hr1G116380.10","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G118500.1","No alias","Hordeum vulgare","GPI lipid remodeling hydrolase *(PGAP3)","protein_coding"
"HORVU5Hr1G119820.1","No alias","Hordeum vulgare","phospholipase-A2 *(pPLA2-II))","protein_coding"
"HORVU5Hr1G120600.3","No alias","Hordeum vulgare","COPI trafficking K/HDEL-signature cargo receptor","protein_coding"
"HORVU6Hr1G006940.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G019320.1","No alias","Hordeum vulgare","component *(mS78/mS79) of small mitoribosomal-subunit proteome","protein_coding"
"HORVU6Hr1G021670.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G028890.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G030000.1","No alias","Hordeum vulgare","subunit gamma of co-translational insertion system Sec61 subcomplex","protein_coding"
"HORVU6Hr1G032490.2","No alias","Hordeum vulgare","EC_3.2 glycosylase","protein_coding"
"HORVU6Hr1G041520.3","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G044840.1","No alias","Hordeum vulgare","component *(eS24) of small ribosomal-subunit (SSU) proteome","protein_coding"
"HORVU6Hr1G046420.25","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G052950.7","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G058920.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G059710.3","No alias","Hordeum vulgare","protein disulfide isomerase *(PDI-B)","protein_coding"
"HORVU6Hr1G064180.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G066160.1","No alias","Hordeum vulgare","component *(Tim13) of inner mitochondrion membrane TIM22 insertion system","protein_coding"
"HORVU6Hr1G070090.1","No alias","Hordeum vulgare","AHL clade-A transcription factor","protein_coding"
"HORVU6Hr1G078300.1","No alias","Hordeum vulgare","MYB class-R2R3 subgroup-10/24 transcription factor","protein_coding"
"HORVU6Hr1G085490.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G085750.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G088120.3","No alias","Hordeum vulgare","sliding clamp protein *(PCNA)","protein_coding"
"HORVU6Hr1G095080.4","No alias","Hordeum vulgare","outer membrane porin *(OEP21)","protein_coding"
"HORVU7Hr1G007870.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G008160.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G018300.6","No alias","Hordeum vulgare","transcriptional co-activator *(BET/GTE)","protein_coding"
"HORVU7Hr1G020510.4","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G025570.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G030000.16","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G033760.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G037230.2","No alias","Hordeum vulgare","bZIP class-S/SE transcription factor","protein_coding"
"HORVU7Hr1G039180.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G039510.2","No alias","Hordeum vulgare","component *(SR-beta) of SRP (signal recognition particle) receptor complex","protein_coding"
"HORVU7Hr1G048120.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G050170.1","No alias","Hordeum vulgare","component *(eL31) of large ribosomal-subunit (LSU) proteome","protein_coding"
"HORVU7Hr1G051370.4","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G051550.3","No alias","Hordeum vulgare","mTERF-type transcription factor","protein_coding"
"HORVU7Hr1G059420.1","No alias","Hordeum vulgare","signal peptidase *(SPP)","protein_coding"
"HORVU7Hr1G062680.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G062690.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G062710.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G063280.1","No alias","Hordeum vulgare","component *(eL27) of large ribosomal-subunit (LSU) proteome","protein_coding"
"HORVU7Hr1G063620.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G063650.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G067520.3","No alias","Hordeum vulgare","deadenylase component *(CAF1) of mRNA deadenylation CCR4-NOT complex","protein_coding"
"HORVU7Hr1G073520.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G073580.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G080630.1","No alias","Hordeum vulgare","component *(eL22) of large ribosomal-subunit (LSU) proteome","protein_coding"
"HORVU7Hr1G081910.1","No alias","Hordeum vulgare","component *(eL43) of large ribosomal-subunit (LSU) proteome","protein_coding"
"HORVU7Hr1G082240.2","No alias","Hordeum vulgare","assembly factor (eIF1A) of eIF1","protein_coding"
"HORVU7Hr1G084790.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G086340.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G095460.2","No alias","Hordeum vulgare","arogenate dehydrogenase *(ADH)","protein_coding"
"HORVU7Hr1G100010.1","No alias","Hordeum vulgare","ASK-type linker component of SCF E3 ubiquitin ligase complexes","protein_coding"
"HORVU7Hr1G112930.2","No alias","Hordeum vulgare","GDP-L-fucose synthase & EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding"
"HORVU7Hr1G117670.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"Kfl00004_0070","kfl00004_0070_v1.1","Klebsormidium nitens","(at3g19180 : 127.0) Encodes a chloroplast division factor located in the plastid inner envelope with its N-terminus exposed to the stroma.  PARC6 influences FtsZ assembly and is required for recruitment of PDV1 during chloroplast division.; paralog of ARC6 (PARC6); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT5G42480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 254.0) &  (original description: no original description)","protein_coding"
"Kfl00005_0580","kfl00005_0580_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00006_0490","kfl00006_0490_v1.1","Klebsormidium nitens","(at1g79350 : 335.0) embryo defective 1135 (EMB1135); FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, LSD1-type (InterPro:IPR005735), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); Has 4247 Blast hits to 3784 proteins in 326 species: Archae - 2; Bacteria - 520; Metazoa - 2572; Fungi - 347; Plants - 469; Viruses - 36; Other Eukaryotes - 301 (source: NCBI BLink). & (reliability: 670.0) &  (original description: no original description)","protein_coding"
"Kfl00007_0070","kfl00007_0070_v1.1","Klebsormidium nitens","(at1g59600 : 87.0) ZCW7; Has 136 Blast hits to 136 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 101; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 174.0) &  (original description: no original description)","protein_coding"
"Kfl00008_0070","kfl00008_0070_v1.1","Klebsormidium nitens","(at3g18730 : 223.0) Encodes a protein with an important role in cell division control and plant morphogenesis and may also play a role in genome maintenance.  May be involved in mitosis through interaction with TSA1. In cells synchronized for cell division, TSA1 and TSK relocalize to ends of spindle microtubules that are ahead of separating chromatids during metaphase and anaphase of mitosis.; TONSOKU (TSK); FUNCTIONS IN: protein binding; INVOLVED IN: G2/M transition of mitotic cell cycle, meristem structural organization, regulation of meristem structural organization, cell division; LOCATED IN: nucleus, membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat (InterPro:IPR019734); Has 6425 Blast hits to 3886 proteins in 382 species: Archae - 66; Bacteria - 1534; Metazoa - 3543; Fungi - 23; Plants - 266; Viruses - 0; Other Eukaryotes - 993 (source: NCBI BLink). & (reliability: 446.0) &  (original description: no original description)","protein_coding"
"Kfl00009_0080","kfl00009_0080_v1.1","Klebsormidium nitens","(at3g55490 : 114.0) GINS complex protein; CONTAINS InterPro DOMAIN/s: GINS complex, subunit Psf3 (InterPro:IPR010492), GINS complex (InterPro:IPR021151); BEST Arabidopsis thaliana protein match is: GINS complex protein (TAIR:AT1G19080.2); Has 336 Blast hits to 336 proteins in 155 species: Archae - 0; Bacteria - 0; Metazoa - 141; Fungi - 114; Plants - 49; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 228.0) &  (original description: no original description)","protein_coding"
"Kfl00009_0110","kfl00009_0110_v1.1","Klebsormidium nitens","(at3g18630 : 321.0) Encodes a uracil-DNA glycosylase (UDG) involved in a base excision DNA repair pathway in mitochondria.; uracil dna glycosylase (UNG); FUNCTIONS IN: uracil DNA N-glycosylase activity; INVOLVED IN: DNA repair, base-excision repair; LOCATED IN: mitochondrion; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Uracil-DNA glycosylase (InterPro:IPR002043), Uracil-DNA glycosylase-like (InterPro:IPR005122); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10550.1); Has 5606 Blast hits to 5606 proteins in 2219 species: Archae - 2; Bacteria - 4117; Metazoa - 124; Fungi - 141; Plants - 47; Viruses - 234; Other Eukaryotes - 941 (source: NCBI BLink). & (reliability: 642.0) &  (original description: no original description)","protein_coding"
"Kfl00010_0300","kfl00010_0300_v1.1","Klebsormidium nitens","(at3g14740 : 171.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: homologue of trithorax (TAIR:AT2G31650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 342.0) &  (original description: no original description)","protein_coding"
"Kfl00012_0160","kfl00012_0160_v1.1","Klebsormidium nitens","(at3g12170 : 237.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: J-domain protein 6 (TAIR:AT5G06910.1); Has 23895 Blast hits to 23888 proteins in 3317 species: Archae - 171; Bacteria - 9423; Metazoa - 4258; Fungi - 2263; Plants - 2420; Viruses - 67; Other Eukaryotes - 5293 (source: NCBI BLink). & (reliability: 474.0) &  (original description: no original description)","protein_coding"
"Kfl00013_0430","kfl00013_0430_v1.1","Klebsormidium nitens","(at1g18090 : 256.0) 5'-3' exonuclease family protein; FUNCTIONS IN: DNA binding, catalytic activity, nuclease activity; INVOLVED IN: DNA repair; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: XPG conserved site (InterPro:IPR019974), XPG N-terminal (InterPro:IPR006085), DNA repair protein (XPGC)/yeast Rad (InterPro:IPR006084), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), Helix-hairpin-helix motif, class 2 (InterPro:IPR008918), XPG/RAD2 endonuclease (InterPro:IPR006086); BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT1G29630.2); Has 2139 Blast hits to 2052 proteins in 399 species: Archae - 267; Bacteria - 71; Metazoa - 522; Fungi - 572; Plants - 187; Viruses - 16; Other Eukaryotes - 504 (source: NCBI BLink). & (reliability: 512.0) &  (original description: no original description)","protein_coding"
"Kfl00015_0330","kfl00015_0330_v1.1","Klebsormidium nitens","(at2g20110 : 89.7) Tesmin/TSO1-like CXC domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tesmin/TSO1-like, CXC (InterPro:IPR005172); BEST Arabidopsis thaliana protein match is: Tesmin/TSO1-like CXC domain-containing protein (TAIR:AT4G29000.1); Has 1016 Blast hits to 700 proteins in 97 species: Archae - 0; Bacteria - 2; Metazoa - 306; Fungi - 3; Plants - 316; Viruses - 1; Other Eukaryotes - 388 (source: NCBI BLink). & (reliability: 179.4) &  (original description: no original description)","protein_coding"
"Kfl00017_0130","kfl00017_0130_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00020_0220","kfl00020_0220_v1.1","Klebsormidium nitens","(at3g54750 : 196.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages. & (reliability: 392.0) &  (original description: no original description)","protein_coding"
"Kfl00022_0460","kfl00022_0460_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00023_0290","kfl00023_0290_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00023_0330","kfl00023_0330_v1.1","Klebsormidium nitens","(at2g20635 : 307.0) ATP binding;protein kinases;protein serine/threonine kinases; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Mitotic checkpoint serine/threonine protein kinase, Bub1 (InterPro:IPR015661), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Mad3/BUB1 homology region 1 (InterPro:IPR013212), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: BUB1-related (BUB1: budding uninhibited by benzymidazol 1) (TAIR:AT2G33560.1); Has 7386 Blast hits to 7115 proteins in 591 species: Archae - 30; Bacteria - 832; Metazoa - 2305; Fungi - 1186; Plants - 1328; Viruses - 3; Other Eukaryotes - 1702 (source: NCBI BLink). & (reliability: 614.0) &  (original description: no original description)","protein_coding"
"Kfl00024_0350","kfl00024_0350_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00024_0510","kfl00024_0510_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00025_0110","kfl00025_0110_v1.1","Klebsormidium nitens","(at3g52155 : 141.0) Phosphoglycerate mutase family protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078); Has 1391 Blast hits to 1391 proteins in 390 species: Archae - 1; Bacteria - 792; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 554 (source: NCBI BLink). & (reliability: 282.0) &  (original description: no original description)","protein_coding"
"Kfl00025_0210","kfl00025_0210_v1.1","Klebsormidium nitens","(at1g71810 : 652.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase, catalytic domain (InterPro:IPR000719), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G79600.1); Has 10169 Blast hits to 10147 proteins in 1817 species: Archae - 128; Bacteria - 4438; Metazoa - 409; Fungi - 485; Plants - 724; Viruses - 16; Other Eukaryotes - 3969 (source: NCBI BLink). & (reliability: 1304.0) &  (original description: no original description)","protein_coding"
"Kfl00026_0270","kfl00026_0270_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00028_0040","kfl00028_0040_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00028_g56","kfl00028_g56_v1.1","Klebsormidium nitens","(at2g27960 : 105.0) catalytic subunit of cyclin dependent kinase 1. physically interact with cyclin-dependent kinases (CDKs) and play an essential, but yet not entirely resolved, role in the regulation of the cell cycle; cyclin-dependent kinase-subunit 1 (CKS1); CONTAINS InterPro DOMAIN/s: Cyclin-dependent kinase, regulatory subunit (InterPro:IPR000789); BEST Arabidopsis thaliana protein match is: CDK-subunit 2 (TAIR:AT2G27970.1); Has 657 Blast hits to 657 proteins in 207 species: Archae - 0; Bacteria - 0; Metazoa - 305; Fungi - 139; Plants - 105; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). & (reliability: 210.0) &  (original description: no original description)","protein_coding"
"Kfl00032_0190","kfl00032_0190_v1.1","Klebsormidium nitens","(at2g39780 : 134.0) S-like ribonuclease; ribonuclease 2 (RNS2); FUNCTIONS IN: ribonuclease T2 activity, endoribonuclease activity, RNA binding; INVOLVED IN: aging; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease T2 (InterPro:IPR001568), Ribonuclease T2, active site (InterPro:IPR018188); BEST Arabidopsis thaliana protein match is: Ribonuclease T2 family protein (TAIR:AT1G14220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p83618|rn28_pangi : 105.0) Ribonuclease-like storage protein precursor (Root 28 kDa major protein) - Panax ginseng (Korean ginseng) & (reliability: 268.0) &  (original description: no original description)","protein_coding"
"Kfl00035_0370","kfl00035_0370_v1.1","Klebsormidium nitens","(at2g32240 : 84.7) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G05320.3); Has 470429 Blast hits to 168274 proteins in 4282 species: Archae - 6896; Bacteria - 131956; Metazoa - 175525; Fungi - 33166; Plants - 25441; Viruses - 2243; Other Eukaryotes - 95202 (source: NCBI BLink). & (reliability: 160.2) &  (original description: no original description)","protein_coding"
"Kfl00038_0380","kfl00038_0380_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00039_0170","kfl00039_0170_v1.1","Klebsormidium nitens","(at2g32590 : 335.0) LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Barren (InterPro:IPR008418); Has 467 Blast hits to 447 proteins in 202 species: Archae - 0; Bacteria - 4; Metazoa - 147; Fungi - 168; Plants - 39; Viruses - 1; Other Eukaryotes - 108 (source: NCBI BLink). & (reliability: 670.0) &  (original description: no original description)","protein_coding"
"Kfl00039_0290","kfl00039_0290_v1.1","Klebsormidium nitens","(at3g19210 : 410.0) Encodes RAD54, a member of the SWI2/SNF2 family of DNA-stimulated ATPases.  Functions in DNA repair via homologous recombination.; homolog of RAD54 (RAD54); FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: DNA repair, response to gamma radiation, double-strand break repair via homologous recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: style (sensu Poaceae), hydathode, root, petiole; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: switch 2 (TAIR:AT1G03750.1). & (q7g8y3|isw2_orysa : 187.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 820.0) &  (original description: no original description)","protein_coding"
"Kfl00040_0260","kfl00040_0260_v1.1","Klebsormidium nitens","(at2g45490 : 181.0) Encodes a member of a family of Ser/Thr kinases whose activities peak during cell division.  Transcripts are abundant in tissues rich in dividing cells like roots and flowers but are low or absent in fully expanded leaves and stems.  In interphase cells, the protein is predominantly nuclear.  During mitosis, the protein associates with plant-specific cytoskeletal structures (preprophase band, phragmoplast, nascent cell plate) that are necessary for cytokinesis as well as with the microtubule spindle. The protein is concentrated in nuclear dots arranged around the nucleolus and the nuclear periphery in early prophase cells.; ataurora3 (AUR3); CONTAINS InterPro DOMAIN/s: Spindle assembly checkpoint kinase (InterPro:IPR020663), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: ataurora1 (TAIR:AT4G32830.1); Has 132422 Blast hits to 130217 proteins in 4585 species: Archae - 167; Bacteria - 15261; Metazoa - 49222; Fungi - 13102; Plants - 32389; Viruses - 552; Other Eukaryotes - 21729 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 166.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 342.0) &  (original description: no original description)","protein_coding"
"Kfl00044_0340","kfl00044_0340_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00049_0160","kfl00049_0160_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00050_0400","kfl00050_0400_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00051_0030","kfl00051_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00054_0390","kfl00054_0390_v1.1","Klebsormidium nitens","(at1g61000 : 125.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: mitosis; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Kinetochore protein Nuf2 (InterPro:IPR005549); Has 50972 Blast hits to 29793 proteins in 2070 species: Archae - 902; Bacteria - 7404; Metazoa - 23628; Fungi - 4156; Plants - 2312; Viruses - 158; Other Eukaryotes - 12412 (source: NCBI BLink). & (reliability: 250.0) &  (original description: no original description)","protein_coding"
"Kfl00057_0090","kfl00057_0090_v1.1","Klebsormidium nitens","(at2g22140 : 132.0) Forms a complex with MUS81 that functions as endonuclease in DNA recombination and repair processes.; essential meiotic endonuclease 1B (EME1B); CONTAINS InterPro DOMAIN/s: ERCC4 domain (InterPro:IPR006166); BEST Arabidopsis thaliana protein match is: essential meiotic endonuclease 1A (TAIR:AT2G21800.1); Has 542 Blast hits to 486 proteins in 142 species: Archae - 0; Bacteria - 42; Metazoa - 170; Fungi - 104; Plants - 48; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). & (reliability: 264.0) &  (original description: no original description)","protein_coding"
"Kfl00057_0150","kfl00057_0150_v1.1","Klebsormidium nitens","(at5g08020 : 486.0) Encodes a homolog of Replication Protein A. rpa70b mutants are hypersensitive to UV-B radiation and MMS treatments suggesting a role for this protein in DNA damage repair.; RPA70-kDa subunit B (RPA70B); FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: DNA repair, response to UV-B, DNA replication; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Replication factor-a protein 1 Rpa1 (InterPro:IPR004591), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Replication factor A, C-terminal (InterPro:IPR013955), Replication factor-A protein 1, N-terminal (InterPro:IPR007199); BEST Arabidopsis thaliana protein match is: Replication factor-A protein 1-related (TAIR:AT5G61000.1); Has 1056 Blast hits to 1045 proteins in 226 species: Archae - 10; Bacteria - 0; Metazoa - 213; Fungi - 147; Plants - 535; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (reliability: 972.0) &  (original description: no original description)","protein_coding"
"Kfl00058_g44","kfl00058_g44_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00066_0210","kfl00066_0210_v1.1","Klebsormidium nitens","(at4g22970 : 243.0) Encodes a separase (ESP), homologous to human and mouse separase protein. Separase is a capase family protease required for the release of sister chromatid cohesion during meiosis and mitosis.  Arabidopsis separase contains a predicted 2Fe2S-ferredoxin domain that is not present in the proteins of other organisms. Also contains a putative EF-hand calcium binding domain. Mutant seeds exhibited embryo arrest at the globular stage. The endosperm also exhibited a weak titan-like phenotype. Transgenic plants expressing AESP RNA interference (RNAi) from the meiosis-specific DMC1 promoter exhibited alterations in chromosome segregation during meiosis I and II that resulted in polyads containing from one to eight microspores. Plays an essential role in embryo development.  Required for the removal of cohesin from meiotic chromosomes and establishment of meiotic nuclear domains. This gene was also identified through the rsw4 mutant. Lines carrying recessive, temperature-sensitive mutations exhibit reduced anisotropic growth at 30 degrees Celsius. Microtubules and cellulose microfibrils are not depleted or disoriented in the mutants at the restrictive temperature.; homolog of separase (ESP); FUNCTIONS IN: peptidase activity; INVOLVED IN: meiotic chromosome separation, chromosome separation, embryo development ending in seed dormancy, positive regulation of sister chromatid cohesion, endosperm development; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C50, separase (InterPro:IPR005314); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28550.1). & (reliability: 486.0) &  (original description: no original description)","protein_coding"
"Kfl00070_0070","kfl00070_0070_v1.1","Klebsormidium nitens","(at1g79350 : 143.0) embryo defective 1135 (EMB1135); FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, LSD1-type (InterPro:IPR005735), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); Has 4247 Blast hits to 3784 proteins in 326 species: Archae - 2; Bacteria - 520; Metazoa - 2572; Fungi - 347; Plants - 469; Viruses - 36; Other Eukaryotes - 301 (source: NCBI BLink). & (reliability: 286.0) &  (original description: no original description)","protein_coding"
"Kfl00075_0310","kfl00075_0310_v1.1","Klebsormidium nitens","(p22177|pcna_soybn : 320.0) Proliferating cell nuclear antigen (PCNA) (Cyclin) (Fragment) - Glycine max (Soybean) & (at2g29570 : 314.0) Functionally interacts with POLH to repair DNA damaged by UVB damage.; proliferating cell nuclear antigen 2 (PCNA2); FUNCTIONS IN: DNA binding, DNA polymerase processivity factor activity; INVOLVED IN: regulation of DNA replication, error-prone translesion synthesis; LOCATED IN: PCNA complex, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proliferating cell nuclear antigen, PCNA (InterPro:IPR000730), Proliferating cell nuclear antigen, PCNA, C-terminal (InterPro:IPR022649), Proliferating cell nuclear antigen, PCNA, conserved site (InterPro:IPR022659), Proliferating cell nuclear antigen, PCNA, N-terminal (InterPro:IPR022648); BEST Arabidopsis thaliana protein match is: proliferating cellular nuclear antigen 1 (TAIR:AT1G07370.1); Has 1860 Blast hits to 1848 proteins in 457 species: Archae - 391; Bacteria - 0; Metazoa - 314; Fungi - 169; Plants - 159; Viruses - 73; Other Eukaryotes - 754 (source: NCBI BLink). & (reliability: 628.0) &  (original description: no original description)","protein_coding"
"Kfl00075_0320","kfl00075_0320_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00080_0010","kfl00080_0010_v1.1","Klebsormidium nitens","(at3g15150 : 100.0) Encodes a SUMO E3 ligase that regulates endocycle onset and meristem maintenance.; HIGH PLOIDY2 (HPY2); Has 268 Blast hits to 268 proteins in 104 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 53; Plants - 46; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (reliability: 200.0) &  (original description: no original description)","protein_coding"
"Kfl00080_0190","kfl00080_0190_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00083_0060","kfl00083_0060_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00083_0330","kfl00083_0330_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00089_0200","kfl00089_0200_v1.1","Klebsormidium nitens","(at3g48160 : 110.0) E2F-like protein, an inhibitor of the endocycle, preserves the mitotic state of proliferating cells by suppressing transcription of genes that are required for cells to enter the DNA endoreduplication cycle.; DP-E2F-like 1 (DEL1); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription factor E2F/dimerisation partner (TDP) (InterPro:IPR003316), E2F Family (InterPro:IPR015633); BEST Arabidopsis thaliana protein match is: DP-E2F-like protein 3 (TAIR:AT3G01330.1); Has 1182 Blast hits to 869 proteins in 113 species: Archae - 0; Bacteria - 0; Metazoa - 722; Fungi - 9; Plants - 301; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (reliability: 220.0) &  (original description: no original description)","protein_coding"
"Kfl00091_0190","kfl00091_0190_v1.1","Klebsormidium nitens","(at1g09450 : 284.0) Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719); Has 302 Blast hits to 302 proteins in 127 species: Archae - 0; Bacteria - 0; Metazoa - 120; Fungi - 113; Plants - 37; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 568.0) &  (original description: no original description)","protein_coding"
"Kfl00102_0020","kfl00102_0020_v1.1","Klebsormidium nitens","(at1g74150 : 104.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Kelch repeat type 1 (InterPro:IPR006652), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 2 (InterPro:IPR011498), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G18610.1); Has 11763 Blast hits to 5823 proteins in 445 species: Archae - 10; Bacteria - 555; Metazoa - 4461; Fungi - 1268; Plants - 2654; Viruses - 19; Other Eukaryotes - 2796 (source: NCBI BLink). & (reliability: 208.0) &  (original description: no original description)","protein_coding"
"Kfl00102_0050","kfl00102_0050_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00108_0130","kfl00108_0130_v1.1","Klebsormidium nitens","(q8lpu5|cmt3_maize : 469.0) DNA (cytosine-5)-methyltransferase 3 (EC 2.1.1.37) (Chromomethylase 3) (DNA methyltransferase 105) - Zea mays (Maize) & (at4g19020 : 419.0) chromomethylase 2 (CMT2); FUNCTIONS IN: chromatin binding, DNA binding; INVOLVED IN: chromatin assembly or disassembly, DNA methylation; LOCATED IN: chromatin, nucleus; CONTAINS InterPro DOMAIN/s: DNA methylase, C-5 cytosine-specific (InterPro:IPR001525), Chromo domain-like (InterPro:IPR016197), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Chromo domain (InterPro:IPR000953); BEST Arabidopsis thaliana protein match is: chromomethylase 3 (TAIR:AT1G69770.1); Has 5135 Blast hits to 4403 proteins in 1000 species: Archae - 207; Bacteria - 2602; Metazoa - 790; Fungi - 215; Plants - 463; Viruses - 25; Other Eukaryotes - 833 (source: NCBI BLink). & (reliability: 838.0) &  (original description: no original description)","protein_coding"
"Kfl00110_0200","kfl00110_0200_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00110_0320","kfl00110_0320_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00112_0010","kfl00112_0010_v1.1","Klebsormidium nitens","(at1g64960 : 375.0) ARM repeat superfamily protein; FUNCTIONS IN: binding; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-type fold (InterPro:IPR016024); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 750.0) &  (original description: no original description)","protein_coding"
"Kfl00112_0070","kfl00112_0070_v1.1","Klebsormidium nitens","(at1g80370 : 326.0) Cyclin A2;4 (CYCA2;4); CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin (InterPro:IPR006670), G2/mitotic-specific cyclin A (InterPro:IPR015453), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400); BEST Arabidopsis thaliana protein match is: CYCLIN A2;3 (TAIR:AT1G15570.1); Has 4103 Blast hits to 4099 proteins in 369 species: Archae - 0; Bacteria - 2; Metazoa - 1911; Fungi - 542; Plants - 1008; Viruses - 34; Other Eukaryotes - 606 (source: NCBI BLink). & (p25010|ccnal_dauca : 300.0) G2/mitotic-specific cyclin C13-1 (A-like cyclin) (Fragment) - Daucus carota (Carrot) & (reliability: 652.0) &  (original description: no original description)","protein_coding"
"Kfl00113_0300","kfl00113_0300_v1.1","Klebsormidium nitens","(at4g29170 : 166.0) A homolog of yeast, mouse and human mnd1delta protein. Null mutants exhibit normal vegetative and flower development; however, during prophase I, chromosomes become fragmented resulting in random distribution of the fragments between polyads. Both male and female meiosis are defective and strong accumulation of AtRAD51 was observed in the inflorescence nuclei of mutant plants. Similarly to its yeast and animal homologues, AtMnd1 might play a role in DSB repair during meiosis.; ATMND1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: double-strand break repair, embryo sac development, response to ionizing radiation, pollen development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Meiotic nuclear division protein 1 (InterPro:IPR005647); Has 323 Blast hits to 323 proteins in 161 species: Archae - 0; Bacteria - 2; Metazoa - 88; Fungi - 122; Plants - 42; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (reliability: 332.0) &  (original description: no original description)","protein_coding"
"Kfl00114_0100","kfl00114_0100_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00114_0110","kfl00114_0110_v1.1","Klebsormidium nitens","(p17070|pcna_orysa : 408.0) Proliferating cell nuclear antigen (PCNA) (Cyclin) - Oryza sativa (Rice) & (at1g07370 : 400.0) Encodes putative proliferating cell nuclear antigen involved in cell cycle regulation.; proliferating cellular nuclear antigen 1 (PCNA1); CONTAINS InterPro DOMAIN/s: Proliferating cell nuclear antigen, PCNA (InterPro:IPR000730), Proliferating cell nuclear antigen, PCNA, C-terminal (InterPro:IPR022649), Proliferating cell nuclear antigen, PCNA, conserved site (InterPro:IPR022659), Proliferating cell nuclear antigen, PCNA, N-terminal (InterPro:IPR022648); BEST Arabidopsis thaliana protein match is: proliferating cell nuclear antigen 2 (TAIR:AT2G29570.1); Has 1857 Blast hits to 1845 proteins in 456 species: Archae - 391; Bacteria - 0; Metazoa - 315; Fungi - 169; Plants - 159; Viruses - 71; Other Eukaryotes - 752 (source: NCBI BLink). & (reliability: 800.0) &  (original description: no original description)","protein_coding"
"Kfl00115_0040","kfl00115_0040_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00116_0090","kfl00116_0090_v1.1","Klebsormidium nitens","(at1g04020 : 184.0) Encodes a protein containing two tandem BRCA1 C-Terminal (BRCT) domains, which function in phosphorylation-dependent proteinñprotein interactions.Loss of function mutations cause defects in meristem organization due to failure to repress WUS. BARD1 binds to WUS promoter and over expression of BARD reduces the extent of WUS expression.; breast cancer associated RING 1 (BARD1); FUNCTIONS IN: transcription coactivator activity, DNA binding; INVOLVED IN: DNA repair, regulation of meristem structural organization, leaf development; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type (InterPro:IPR001965), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: breast cancer susceptibility1 (TAIR:AT4G21070.1); Has 6045 Blast hits to 5706 proteins in 320 species: Archae - 0; Bacteria - 47; Metazoa - 4577; Fungi - 362; Plants - 542; Viruses - 11; Other Eukaryotes - 506 (source: NCBI BLink). & (reliability: 354.0) &  (original description: no original description)","protein_coding"
"Kfl00118_0140","kfl00118_0140_v1.1","Klebsormidium nitens","(p32811|phsh_soltu : 847.0) Alpha-glucan phosphorylase, H isozyme (EC 2.4.1.1) (Starch phosphorylase H) - Solanum tuberosum (Potato) & (at3g46970 : 840.0) Encodes a cytosolic alpha-glucan phosphorylase. In vitro, the enzyme has a preference for branched polysaccharides, such as glycogen.; alpha-glucan phosphorylase 2 (PHS2); FUNCTIONS IN: phosphorylase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to cadmium ion, response to water deprivation; LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 35 (InterPro:IPR000811), Glycogen/starch/alpha-glucan phosphorylase (InterPro:IPR011833); BEST Arabidopsis thaliana protein match is: Glycosyl transferase, family 35 (TAIR:AT3G29320.1); Has 5792 Blast hits to 5741 proteins in 1741 species: Archae - 74; Bacteria - 3953; Metazoa - 555; Fungi - 138; Plants - 232; Viruses - 2; Other Eukaryotes - 838 (source: NCBI BLink). & (reliability: 1680.0) &  (original description: no original description)","protein_coding"
"Kfl00125_0020","kfl00125_0020_v1.1","Klebsormidium nitens","(at2g13370 : 403.0) chromatin remodeling 5 (CHR5); FUNCTIONS IN: chromatin binding, helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: chromatin assembly or disassembly; LOCATED IN: chromatin, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), Homeodomain-like (InterPro:IPR009057), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor CHD3 (PICKLE) (TAIR:AT2G25170.1); Has 38529 Blast hits to 28045 proteins in 2467 species: Archae - 189; Bacteria - 9973; Metazoa - 8887; Fungi - 6205; Plants - 2508; Viruses - 447; Other Eukaryotes - 10320 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 384.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 776.0) &  (original description: no original description)","protein_coding"
"Kfl00131_0170","kfl00131_0170_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00137_0140","kfl00137_0140_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00141_0070","kfl00141_0070_v1.1","Klebsormidium nitens","(at1g66740 : 256.0) Located on the SSL2 region of Arabidopsis thaliana, which is homeologous to the Brassica S locus for self incompatibility. Expressed in both vegetative and reproductive organs suggesting AtSP7 might not be involved in self incompatibility.; SGA2; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: chromatin assembly or disassembly, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: endomembrane system, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone chaperone,  ASF1-like (InterPro:IPR006818); BEST Arabidopsis thaliana protein match is: anti- silencing function 1b (TAIR:AT5G38110.1); Has 608 Blast hits to 608 proteins in 232 species: Archae - 0; Bacteria - 0; Metazoa - 247; Fungi - 167; Plants - 75; Viruses - 0; Other Eukaryotes - 119 (source: NCBI BLink). & (reliability: 512.0) &  (original description: no original description)","protein_coding"
"Kfl00142_0080","kfl00142_0080_v1.1","Klebsormidium nitens","(q7g8y3|isw2_orysa : 220.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (at3g06400 : 218.0) Encodes a SWI2/SNF2 chromatin remodeling protein belonging to the ISWI family. Involved in nuclear proliferation during megagametogenesis and cell expansion in the sporophyte. Constitutively expressed. RNAi induced loss of function in megagametogenesis results in female sterility.35S:RNAi plants have reduced stature.; chromatin-remodeling protein 11 (CHR11); FUNCTIONS IN: in 7 functions; INVOLVED IN: cell growth, embryo sac development; LOCATED IN: nucleus, chromatin remodeling complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, nucleosome remodelling ISWI, HAND domain (InterPro:IPR015194), SANT, eukarya (InterPro:IPR017884), SNF2-related (InterPro:IPR000330), SANT, DNA-binding (InterPro:IPR001005), SLIDE (InterPro:IPR015195), Homeodomain-like (InterPro:IPR009057), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor17 (TAIR:AT5G18620.2). & (reliability: 410.0) &  (original description: no original description)","protein_coding"
"Kfl00144_0030","kfl00144_0030_v1.1","Klebsormidium nitens","(at1g18335 : 168.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 336.0) &  (original description: no original description)","protein_coding"
"Kfl00147_0040","kfl00147_0040_v1.1","Klebsormidium nitens","(at3g02820 : 124.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: cell cycle, replication fork protection, response to DNA damage stimulus; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Replication fork protection component Swi3 (InterPro:IPR012923), Zinc finger, CCHC-type (InterPro:IPR001878); Has 415 Blast hits to 415 proteins in 134 species: Archae - 0; Bacteria - 4; Metazoa - 156; Fungi - 94; Plants - 93; Viruses - 28; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 248.0) &  (original description: no original description)","protein_coding"
"Kfl00161_0190","kfl00161_0190_v1.1","Klebsormidium nitens","(at4g18590 : 93.6) Nucleic acid-binding, OB-fold-like protein; CONTAINS InterPro DOMAIN/s: Replication factor A protein 3 (InterPro:IPR013970), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT3G52630.2); Has 94 Blast hits to 94 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 27; Fungi - 2; Plants - 56; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 187.2) &  (original description: no original description)","protein_coding"
"Kfl00173_0090","kfl00173_0090_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00185_0250","kfl00185_0250_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00202_0040","kfl00202_0040_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00208_0200","kfl00208_0200_v1.1","Klebsormidium nitens","(at3g48540 : 256.0) Cytidine/deoxycytidylate deaminase family protein; FUNCTIONS IN: hydrolase activity, zinc ion binding, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: APOBEC/CMP deaminase, zinc-binding (InterPro:IPR016192), CMP/dCMP deaminase, zinc-binding (InterPro:IPR002125), Cytidine deaminase-like (InterPro:IPR016193), Cytidine deaminase (InterPro:IPR015517); Has 3737 Blast hits to 3733 proteins in 1421 species: Archae - 65; Bacteria - 2323; Metazoa - 218; Fungi - 134; Plants - 52; Viruses - 89; Other Eukaryotes - 856 (source: NCBI BLink). & (reliability: 512.0) &  (original description: no original description)","protein_coding"
"Kfl00208_0210","kfl00208_0210_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00209_0100","kfl00209_0100_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00219_0520","kfl00219_0520_v1.1","Klebsormidium nitens","(o82797|pcna_tobac : 131.0) Proliferating cell nuclear antigen (PCNA) - Nicotiana tabacum (Common tobacco) & (at2g29570 : 130.0) Functionally interacts with POLH to repair DNA damaged by UVB damage.; proliferating cell nuclear antigen 2 (PCNA2); FUNCTIONS IN: DNA binding, DNA polymerase processivity factor activity; INVOLVED IN: regulation of DNA replication, error-prone translesion synthesis; LOCATED IN: PCNA complex, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proliferating cell nuclear antigen, PCNA (InterPro:IPR000730), Proliferating cell nuclear antigen, PCNA, C-terminal (InterPro:IPR022649), Proliferating cell nuclear antigen, PCNA, conserved site (InterPro:IPR022659), Proliferating cell nuclear antigen, PCNA, N-terminal (InterPro:IPR022648); BEST Arabidopsis thaliana protein match is: proliferating cellular nuclear antigen 1 (TAIR:AT1G07370.1); Has 1860 Blast hits to 1848 proteins in 457 species: Archae - 391; Bacteria - 0; Metazoa - 314; Fungi - 169; Plants - 159; Viruses - 73; Other Eukaryotes - 754 (source: NCBI BLink). & (reliability: 260.0) &  (original description: no original description)","protein_coding"
"Kfl00221_0200","kfl00221_0200_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00221_0210","kfl00221_0210_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00222_0100","kfl00222_0100_v1.1","Klebsormidium nitens","(at5g37630 : 265.0) EMBRYO DEFECTIVE 2656 (EMB2656); FUNCTIONS IN: binding; INVOLVED IN: mitotic chromosome condensation, embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); Has 333 Blast hits to 316 proteins in 147 species: Archae - 0; Bacteria - 4; Metazoa - 113; Fungi - 138; Plants - 47; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). & (reliability: 530.0) &  (original description: no original description)","protein_coding"
"Kfl00231_0010","kfl00231_0010_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00231_0120","kfl00231_0120_v1.1","Klebsormidium nitens","(at3g57870 : 175.0) Encodes a SUMO liagse that directs the attachment of the small protein SUMO to target proteins via an isopeptide bond. This enzyme is localized to the nucleus and plants with reduced levels of this protein show higher sensitivity to ABA in root growth inhibition assays. It has high similarity to the yeast UBC9 SUMO ligase and is sometimes referred to by that name.; sumo conjugation enzyme 1 (SCE1); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquiting-conjugating enzyme 2 (TAIR:AT2G02760.1); Has 9584 Blast hits to 9566 proteins in 388 species: Archae - 0; Bacteria - 0; Metazoa - 4206; Fungi - 2037; Plants - 1834; Viruses - 20; Other Eukaryotes - 1487 (source: NCBI BLink). & (p25866|ubc2_wheat : 107.0) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Triticum aestivum (Wheat) & (reliability: 350.0) &  (original description: no original description)","protein_coding"
"Kfl00234_0120","kfl00234_0120_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00240_0060","kfl00240_0060_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00242_0010","kfl00242_0010_v1.1","Klebsormidium nitens","(at1g08130 : 782.0) Encodes the Arabidopsis DNA ligase 1 that provides the major DNA ligase activity in cells and plays a key role in both DNA replication and excision repair pathways.  Indispensable for cell viability. AtLIG1 expresses one major and two minor mRNA transcripts differing only in the length of the 5' untranslated leader sequences preceding a common ORF. Translation from the first in-frame start codon produces an AtLIG1 isoform that is targeted exclusively to the mitochondria. Translation initiation from the second in-frame start codon produces an AtLIG1 isoform targeted only to the nucleus.; DNA ligase 1 (LIG1); FUNCTIONS IN: DNA binding, DNA ligase (ATP) activity, ATP binding; INVOLVED IN: DNA repair, DNA replication, DNA recombination; LOCATED IN: mitochondrion, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA ligase, N-terminal (InterPro:IPR012308), ATP dependent DNA ligase, central (InterPro:IPR012310), ATP dependent DNA ligase, C-terminal (InterPro:IPR012309), ATP-dependent DNA ligase (InterPro:IPR000977), ATP-dependent DNA ligase, conserved site (InterPro:IPR016059); BEST Arabidopsis thaliana protein match is: ATP-dependent DNA ligase (TAIR:AT1G49250.1); Has 3556 Blast hits to 3521 proteins in 879 species: Archae - 298; Bacteria - 1538; Metazoa - 375; Fungi - 434; Plants - 112; Viruses - 159; Other Eukaryotes - 640 (source: NCBI BLink). & (q7x7e9|dnl4_orysa : 110.0) Putative DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4) - Oryza sativa (Rice) & (reliability: 1564.0) &  (original description: no original description)","protein_coding"
"Kfl00250_0150","kfl00250_0150_v1.1","Klebsormidium nitens","(at3g16730 : 121.0) CONTAINS InterPro DOMAIN/s: Non-SMC condensin II complex, subunit H2-like (InterPro:IPR009378); Has 249 Blast hits to 211 proteins in 82 species: Archae - 0; Bacteria - 0; Metazoa - 145; Fungi - 8; Plants - 30; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (reliability: 242.0) &  (original description: no original description)","protein_coding"
"Kfl00257_0120","kfl00257_0120_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00258_0040","kfl00258_0040_v1.1","Klebsormidium nitens","(at4g15890 : 412.0) binding; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chromosome condensation protein, HCP-6-related (InterPro:IPR012371), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: binding (TAIR:AT3G57060.1); Has 443 Blast hits to 428 proteins in 158 species: Archae - 0; Bacteria - 0; Metazoa - 188; Fungi - 128; Plants - 61; Viruses - 3; Other Eukaryotes - 63 (source: NCBI BLink). & (reliability: 824.0) &  (original description: no original description)","protein_coding"
"Kfl00260_0080","kfl00260_0080_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00271_0080","kfl00271_0080_v1.1","Klebsormidium nitens","(at5g23420 : 89.4) Encodes HMGB6, a protein belonging to the subgroup of HMGB (high mobility group B) proteins.  Localized in the nucleus. Binds to supercoiled DNA in vitro. HMGB6 is phosphorylated by protein kinase CK2alpha within its acidic C-terminal domain.; high-mobility group box 6 (HMGB6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 178.8) &  (original description: no original description)","protein_coding"
"Kfl00274_0090","kfl00274_0090_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00281_0130","kfl00281_0130_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00286_0070","kfl00286_0070_v1.1","Klebsormidium nitens","(p49730|rir2_tobac : 528.0) Ribonucleoside-diphosphate reductase small chain (EC 1.17.4.1) (Ribonucleotide reductase small subunit) (Ribonucleoside-diphosphate reductase R2 subunit) - Nicotiana tabacum (Common tobacco) & (at3g27060 : 518.0) Encodes one of the 3 ribonucleotide reductase (RNR) small subunit genes. TSO2 transcription occurs predominantly at the S-phase of the cell cycle and its expression pattern is consistent with its role in dNDP  biosynthesis during DNA replication in actively dividing cells. Critical for cell cycle progression, DNA damage repair and plant development.; TSO MEANING 'UGLY' IN CHINESE 2 (TSO2); FUNCTIONS IN: oxidoreductase activity, transition metal ion binding, ribonucleoside-diphosphate reductase activity; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase-related (InterPro:IPR012348), Ribonucleotide reductase (InterPro:IPR000358), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078); BEST Arabidopsis thaliana protein match is: ribonucleotide reductase 2A (TAIR:AT3G23580.1); Has 9355 Blast hits to 9350 proteins in 2299 species: Archae - 34; Bacteria - 4270; Metazoa - 263; Fungi - 240; Plants - 185; Viruses - 729; Other Eukaryotes - 3634 (source: NCBI BLink). & (reliability: 1036.0) &  (original description: no original description)","protein_coding"
"Kfl00289_0170","kfl00289_0170_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00290_0040","kfl00290_0040_v1.1","Klebsormidium nitens","(at4g15475 : 145.0) F-box/RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553); BEST Arabidopsis thaliana protein match is: EIN3-binding F box protein 2 (TAIR:AT5G25350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 290.0) &  (original description: no original description)","protein_coding"
"Kfl00304_0110","kfl00304_0110_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00323_0110","kfl00323_0110_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00323_0130","kfl00323_0130_v1.1","Klebsormidium nitens","(at3g46940 : 221.0) DUTP-PYROPHOSPHATASE-LIKE 1 (DUT1); FUNCTIONS IN: hydrolase activity, dUTP diphosphatase activity; INVOLVED IN: DNA repair, 2'-deoxyribonucleotide metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DeoxyUTP pyrophosphatase domain, subfamily 1, (InterPro:IPR008181), DeoxyUTP pyrophosphatase domain (InterPro:IPR008180); Has 7764 Blast hits to 7750 proteins in 2463 species: Archae - 14; Bacteria - 4311; Metazoa - 248; Fungi - 161; Plants - 56; Viruses - 831; Other Eukaryotes - 2143 (source: NCBI BLink). & (reliability: 442.0) &  (original description: no original description)","protein_coding"
"Kfl00334_0010","kfl00334_0010_v1.1","Klebsormidium nitens","(at2g25100 : 313.0) Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: ribonuclease H activity, RNA binding, catalytic activity, nucleic acid binding; INVOLVED IN: RNA metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease H2, subunit A (InterPro:IPR004649), Ribonuclease HII/HIII (InterPro:IPR001352), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); Has 6305 Blast hits to 6298 proteins in 2456 species: Archae - 256; Bacteria - 4469; Metazoa - 152; Fungi - 137; Plants - 56; Viruses - 3; Other Eukaryotes - 1232 (source: NCBI BLink). & (reliability: 626.0) &  (original description: no original description)","protein_coding"
"Kfl00334_0090","kfl00334_0090_v1.1","Klebsormidium nitens","(at3g48160 : 187.0) E2F-like protein, an inhibitor of the endocycle, preserves the mitotic state of proliferating cells by suppressing transcription of genes that are required for cells to enter the DNA endoreduplication cycle.; DP-E2F-like 1 (DEL1); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription factor E2F/dimerisation partner (TDP) (InterPro:IPR003316), E2F Family (InterPro:IPR015633); BEST Arabidopsis thaliana protein match is: DP-E2F-like protein 3 (TAIR:AT3G01330.1); Has 1182 Blast hits to 869 proteins in 113 species: Archae - 0; Bacteria - 0; Metazoa - 722; Fungi - 9; Plants - 301; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (reliability: 374.0) &  (original description: no original description)","protein_coding"
"Kfl00339_0030","kfl00339_0030_v1.1","Klebsormidium nitens","(at3g19210 : 969.0) Encodes RAD54, a member of the SWI2/SNF2 family of DNA-stimulated ATPases.  Functions in DNA repair via homologous recombination.; homolog of RAD54 (RAD54); FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: DNA repair, response to gamma radiation, double-strand break repair via homologous recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: style (sensu Poaceae), hydathode, root, petiole; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: switch 2 (TAIR:AT1G03750.1). & (q7g8y3|isw2_orysa : 216.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1938.0) &  (original description: no original description)","protein_coding"
"Kfl00345_0080","kfl00345_0080_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00347_0090","kfl00347_0090_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00348_0110","kfl00348_0110_v1.1","Klebsormidium nitens","(at2g39440 : 108.0) CONTAINS InterPro DOMAIN/s: Ribonuclease H2, subunit C (InterPro:IPR013924); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 216.0) &  (original description: no original description)","protein_coding"
"Kfl00349_0090","kfl00349_0090_v1.1","Klebsormidium nitens","(at3g25100 : 380.0) Required for normal meiosis, may act in the last round of DNA replication prior to meiosis, sequence similar to yeast CDC45; cell division cycle 45 (CDC45); CONTAINS InterPro DOMAIN/s: CDC45-like protein (InterPro:IPR003874); Has 1810 Blast hits to 1657 proteins in 252 species: Archae - 0; Bacteria - 25; Metazoa - 666; Fungi - 449; Plants - 176; Viruses - 35; Other Eukaryotes - 459 (source: NCBI BLink). & (reliability: 760.0) &  (original description: no original description)","protein_coding"
"Kfl00354_0080","kfl00354_0080_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00365_0030","kfl00365_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00381_0040","kfl00381_0040_v1.1","Klebsormidium nitens","(at1g10930 : 306.0) DNA helicase involved in the maintenance of genome stability by modulation of the DNA damage response and suppression of homologous recombination.; RECQ4A; FUNCTIONS IN: helicase activity, ATP-dependent 3'-5' DNA helicase activity, ATP-dependent helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: chromosome organization, response to DNA damage stimulus, double-strand break repair via homologous recombination; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RQC domain (InterPro:IPR018982), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Helicase/RNase D C-terminal, HRDC domain (InterPro:IPR002121); BEST Arabidopsis thaliana protein match is: RECQ helicase L4B (TAIR:AT1G60930.1); Has 34923 Blast hits to 34782 proteins in 2821 species: Archae - 633; Bacteria - 21324; Metazoa - 3687; Fungi - 2728; Plants - 1606; Viruses - 18; Other Eukaryotes - 4927 (source: NCBI BLink). & (reliability: 612.0) &  (original description: no original description)","protein_coding"
"Kfl00394_0110","kfl00394_0110_v1.1","Klebsormidium nitens","(at2g20980 : 139.0) Similar to MCM10, which in other organism was shown to be involved in the initiation of DNA replication.; minichromosome maintenance 10 (MCM10); CONTAINS InterPro DOMAIN/s: Zinc finger, Mcm10/DnaG-type (InterPro:IPR015408); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 278.0) &  (original description: no original description)","protein_coding"
"Kfl00411_0100","kfl00411_0100_v1.1","Klebsormidium nitens","(at5g48600 : 1014.0) member of SMC subfamily; structural maintenance of chromosome 3 (SMC3); FUNCTIONS IN: transporter activity, ATP binding; INVOLVED IN: chromosome segregation, chromosome organization; LOCATED IN: chromosome, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SMCs flexible hinge (InterPro:IPR010935), RecF/RecN/SMC protein, N-terminal (InterPro:IPR003395); BEST Arabidopsis thaliana protein match is: structural maintenance of chromosomes 2 (TAIR:AT5G62410.1). & (reliability: 2028.0) &  (original description: no original description)","protein_coding"
"Kfl00415_0100","kfl00415_0100_v1.1","Klebsormidium nitens","(at5g13960 : 389.0) Encodes a histone 3 lysine 9 specific methyltransferase involved in the maintenance of DNA methylation. SUVH4/KYP is a SU(VAR)3-9 homolog, a SET domain protein. Known SET domain proteins are involved in epigenetic control of gene expression. There are 10 SUVH genes in Arabidopsis and members of this subfamily of the SET proteins have an additional conserved SRA domain. In kyp mutants, there is a loss of CpNpG methylation. The protein was shown to bind to methylated cytosines of CG, CNG and CNN motifs via its SRA domain but has a preference for the latter two. There is also evidence that KYP/SUVH4 might be involved in the telomerase-independent process known as Alternative Lengthening of Telomeres.; SU(VAR)3-9 homolog 4 (SUVH4); FUNCTIONS IN: double-stranded methylated DNA binding, methyl-CpNpG binding, methyl-CpG binding, histone methyltransferase activity (H3-K9 specific), methyl-CpNpN binding; INVOLVED IN: maintenance of DNA methylation, histone methylation, peptidyl-lysine methylation, histone H3-K9 methylation; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), SRA-YDG (InterPro:IPR003105), Pre-SET domain (InterPro:IPR007728), Post-SET domain (InterPro:IPR003616); BEST Arabidopsis thaliana protein match is: SU(VAR)3-9 homolog 6 (TAIR:AT2G22740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 778.0) &  (original description: no original description)","protein_coding"
"Kfl00459_0030","kfl00459_0030_v1.1","Klebsormidium nitens","(at2g46100 : 150.0) Nuclear transport factor 2 (NTF2) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2358 (InterPro:IPR018790); BEST Arabidopsis thaliana protein match is: Uncharacterized conserved protein (DUF2358) (TAIR:AT3G04890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 300.0) &  (original description: no original description)","protein_coding"
"Kfl00489_0040","kfl00489_0040_v1.1","Klebsormidium nitens","(at2g21790 : 1267.0) encodes large subunit of ribonucleotide reductase involved in the production of deoxyribonucleoside triphosphates (dNTPs) for DNA replication and repair; ribonucleotide reductase 1 (RNR1); FUNCTIONS IN: ribonucleoside-diphosphate reductase activity, ATP binding; INVOLVED IN: response to cadmium ion, DNA replication, deoxyribonucleoside triphosphate biosynthetic process; LOCATED IN: ribonucleoside-diphosphate reductase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase large subunit, N-terminal (InterPro:IPR013509), Ribonucleoside-diphosphate reductase, alpha subunit (InterPro:IPR013346), ATP-cone (InterPro:IPR005144), Ribonucleotide reductase large subunit, C-terminal (InterPro:IPR000788), Ribonucleotide reductase R1 subunit, N-terminal (InterPro:IPR008926); Has 15326 Blast hits to 14804 proteins in 2790 species: Archae - 206; Bacteria - 6388; Metazoa - 177; Fungi - 215; Plants - 88; Viruses - 606; Other Eukaryotes - 7646 (source: NCBI BLink). & (reliability: 2534.0) &  (original description: no original description)","protein_coding"
"Kfl00508_0020","kfl00508_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00508_0030","kfl00508_0030_v1.1","Klebsormidium nitens","(at4g25120 : 167.0) Encodes a homolog of the yeast SRS2 (Suppressor of RAD Six-screen mutant 2) helicase.  The Arabidopsis SRS2 is a functional 3í- to 5í-helicase.  Biochemical studies show that SRS2 disrupts recombinogenic DNA intermediates and facilitates single strand annealing.; SUPPRESSOR OF RAD SIX-SCREEN MUTANT 2 (SRS2); CONTAINS InterPro DOMAIN/s: DNA helicase, UvrD-like, C-terminal (InterPro:IPR014017), Helicase, superfamily 1, UvrD-related (InterPro:IPR014016), DNA helicase, UvrD/REP type (InterPro:IPR000212); Has 26201 Blast hits to 22116 proteins in 2711 species: Archae - 259; Bacteria - 18888; Metazoa - 18; Fungi - 176; Plants - 81; Viruses - 13; Other Eukaryotes - 6766 (source: NCBI BLink). & (reliability: 334.0) &  (original description: no original description)","protein_coding"
"Kfl00511_0110","kfl00511_0110_v1.1","Klebsormidium nitens","(at5g21140 : 141.0) embryo defective 1379 (emb1379); CONTAINS InterPro DOMAIN/s: Nse1 non-SMC component of SMC5-6 complex (InterPro:IPR011513), Zinc finger, RING-like (InterPro:IPR014857); Has 255 Blast hits to 254 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 91; Fungi - 105; Plants - 49; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 282.0) &  (original description: no original description)","protein_coding"
"Kfl00531_0085","kfl00531_0085_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00539_0100","kfl00539_0100_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00575_0070","kfl00575_0070_v1.1","Klebsormidium nitens","(at3g05420 : 141.0) Acyl-CoA binding protein with high affinity for   oleoyl-CoA. Expressed in all plant organs. Involved in fatty acid transport.; acyl-CoA binding protein 4 (ACBP4); FUNCTIONS IN: acyl-CoA binding; INVOLVED IN: lipid transport; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 2 (InterPro:IPR011498), Acyl-CoA-binding protein, ACBP (InterPro:IPR000582), Kelch-type beta propeller (InterPro:IPR015915), FERM/acyl-CoA-binding protein, 3-helical bundle (InterPro:IPR014352); BEST Arabidopsis thaliana protein match is: acyl-CoA binding protein 5 (TAIR:AT5G27630.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q39610|dyha_chlre : 92.0) Dynein alpha chain, flagellar outer arm (DHC alpha) - Chlamydomonas reinhardtii & (reliability: 282.0) &  (original description: no original description)","protein_coding"
"Kfl00580_0060","kfl00580_0060_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00582_g4","kfl00582_g4_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00612_0060","kfl00612_0060_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00634_0010","kfl00634_0010_v1.1","Klebsormidium nitens","(p17070|pcna_orysa : 90.1) Proliferating cell nuclear antigen (PCNA) (Cyclin) - Oryza sativa (Rice) & (at2g29570 : 89.0) Functionally interacts with POLH to repair DNA damaged by UVB damage.; proliferating cell nuclear antigen 2 (PCNA2); FUNCTIONS IN: DNA binding, DNA polymerase processivity factor activity; INVOLVED IN: regulation of DNA replication, error-prone translesion synthesis; LOCATED IN: PCNA complex, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proliferating cell nuclear antigen, PCNA (InterPro:IPR000730), Proliferating cell nuclear antigen, PCNA, C-terminal (InterPro:IPR022649), Proliferating cell nuclear antigen, PCNA, conserved site (InterPro:IPR022659), Proliferating cell nuclear antigen, PCNA, N-terminal (InterPro:IPR022648); BEST Arabidopsis thaliana protein match is: proliferating cellular nuclear antigen 1 (TAIR:AT1G07370.1); Has 1860 Blast hits to 1848 proteins in 457 species: Archae - 391; Bacteria - 0; Metazoa - 314; Fungi - 169; Plants - 159; Viruses - 73; Other Eukaryotes - 754 (source: NCBI BLink). & (reliability: 178.0) &  (original description: no original description)","protein_coding"
"Kfl00677_0030","kfl00677_0030_v1.1","Klebsormidium nitens","(q43124|pcna_brana : 108.0) Proliferating cell nuclear antigen (PCNA) - Brassica napus (Rape) & (at2g29570 : 105.0) Functionally interacts with POLH to repair DNA damaged by UVB damage.; proliferating cell nuclear antigen 2 (PCNA2); FUNCTIONS IN: DNA binding, DNA polymerase processivity factor activity; INVOLVED IN: regulation of DNA replication, error-prone translesion synthesis; LOCATED IN: PCNA complex, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proliferating cell nuclear antigen, PCNA (InterPro:IPR000730), Proliferating cell nuclear antigen, PCNA, C-terminal (InterPro:IPR022649), Proliferating cell nuclear antigen, PCNA, conserved site (InterPro:IPR022659), Proliferating cell nuclear antigen, PCNA, N-terminal (InterPro:IPR022648); BEST Arabidopsis thaliana protein match is: proliferating cellular nuclear antigen 1 (TAIR:AT1G07370.1); Has 1860 Blast hits to 1848 proteins in 457 species: Archae - 391; Bacteria - 0; Metazoa - 314; Fungi - 169; Plants - 159; Viruses - 73; Other Eukaryotes - 754 (source: NCBI BLink). & (reliability: 210.0) &  (original description: no original description)","protein_coding"
"Kfl00692_0040","kfl00692_0040_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00717_0030","kfl00717_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00736_0030","kfl00736_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00759_0040","kfl00759_0040_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00765_0030","kfl00765_0030_v1.1","Klebsormidium nitens","(at1g34770 : 128.0) CONTAINS InterPro DOMAIN/s: MAGE protein (InterPro:IPR002190); Has 1274 Blast hits to 1260 proteins in 85 species: Archae - 0; Bacteria - 0; Metazoa - 1104; Fungi - 45; Plants - 49; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (reliability: 256.0) &  (original description: no original description)","protein_coding"
"Kfl00814_0010","kfl00814_0010_v1.1","Klebsormidium nitens","(at3g54630 : 135.0) CONTAINS InterPro DOMAIN/s: Kinetochore protein Ndc80 (InterPro:IPR005550); Has 24780 Blast hits to 15608 proteins in 1321 species: Archae - 545; Bacteria - 2969; Metazoa - 12597; Fungi - 2181; Plants - 1581; Viruses - 39; Other Eukaryotes - 4868 (source: NCBI BLink). & (reliability: 270.0) &  (original description: no original description)","protein_coding"
"Kfl00825_0020","kfl00825_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00873_0050","kfl00873_0050_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00995_0020","kfl00995_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl01170_0020","kfl01170_0020_v1.1","Klebsormidium nitens","(q43266|pcna_maize : 154.0) Proliferating cell nuclear antigen (PCNA) - Zea mays (Maize) & (at2g29570 : 152.0) Functionally interacts with POLH to repair DNA damaged by UVB damage.; proliferating cell nuclear antigen 2 (PCNA2); FUNCTIONS IN: DNA binding, DNA polymerase processivity factor activity; INVOLVED IN: regulation of DNA replication, error-prone translesion synthesis; LOCATED IN: PCNA complex, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proliferating cell nuclear antigen, PCNA (InterPro:IPR000730), Proliferating cell nuclear antigen, PCNA, C-terminal (InterPro:IPR022649), Proliferating cell nuclear antigen, PCNA, conserved site (InterPro:IPR022659), Proliferating cell nuclear antigen, PCNA, N-terminal (InterPro:IPR022648); BEST Arabidopsis thaliana protein match is: proliferating cellular nuclear antigen 1 (TAIR:AT1G07370.1); Has 1860 Blast hits to 1848 proteins in 457 species: Archae - 391; Bacteria - 0; Metazoa - 314; Fungi - 169; Plants - 159; Viruses - 73; Other Eukaryotes - 754 (source: NCBI BLink). & (reliability: 304.0) &  (original description: no original description)","protein_coding"
"LOC_Os01g02730","No alias","Oryza sativa","TAK14, putative, expressed","protein_coding"
"LOC_Os01g09220","No alias","Oryza sativa","transposon protein, putative, CACTA, En/Spm sub-class, expressed","protein_coding"
"LOC_Os01g16940","No alias","Oryza sativa","MazG nucleotide pyrophosphohydrolase domain containing protein, expressed","protein_coding"
"LOC_Os01g19548","No alias","Oryza sativa","pentatricopeptide, putative, expressed","protein_coding"
"LOC_Os01g37670","No alias","Oryza sativa","OsFBX15 - F-box domain containing protein, expressed","protein_coding"
"LOC_Os01g46400","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g46740","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g49340","No alias","Oryza sativa","arginine/serine-rich coiled-coil protein 1, putative, expressed","protein_coding"
"LOC_Os01g51140","No alias","Oryza sativa","helix-loop-helix DNA-binding domain containing protein, expressed","protein_coding"
"LOC_Os01g54090","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g62920","No alias","Oryza sativa","homeodomain protein, putative, expressed","protein_coding"
"LOC_Os01g67160","No alias","Oryza sativa","cyclin-dependent kinase B1-1, putative, expressed","protein_coding"
"LOC_Os02g07240","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g08540","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g16909","No alias","Oryza sativa","dynein light chain type 1 domain containing protein, expressed","protein_coding"
"LOC_Os02g26404","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g26850","No alias","Oryza sativa","rRNA-processing protein FCF, putative, expressed","protein_coding"
"LOC_Os02g34640","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g38970","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g40680","No alias","Oryza sativa","mis12 protein, expressed","protein_coding"
"LOC_Os02g45890","No alias","Oryza sativa","sulfotransferase domain containing protein, expressed","protein_coding"
"LOC_Os02g46420","No alias","Oryza sativa","transposon protein, putative, unclassified, expressed","protein_coding"
"LOC_Os02g51850","No alias","Oryza sativa","OsAPRL3  adenosine 5'-phosphosulfate reductase-like OsAPRL3, expressed","protein_coding"
"LOC_Os02g52460","No alias","Oryza sativa","zinc knuckle domain containing protein, expressed","protein_coding"
"LOC_Os02g56130","No alias","Oryza sativa","PCNA - Putative DNA replicative polymerase clamp, expressed","protein_coding"
"LOC_Os03g11660","No alias","Oryza sativa","cysteine synthase, putative, expressed","protein_coding"
"LOC_Os03g15380","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g15940","No alias","Oryza sativa","OsWLIM2 - LIM domain protein, putative actin-binding protein and transcription factor, expressed","protein_coding"
"LOC_Os03g21210","No alias","Oryza sativa","endoglucanase, putative, expressed","protein_coding"
"LOC_Os03g51580","No alias","Oryza sativa","helix-loop-helix DNA-binding domain containing protein, expressed","protein_coding"
"LOC_Os03g57990","No alias","Oryza sativa","LTPL74 - Protease inhibitor/seed storage/LTP family protein precursor, expressed","protein_coding"
"LOC_Os03g59020","No alias","Oryza sativa","T-complex protein, putative, expressed","protein_coding"
"LOC_Os04g02510","No alias","Oryza sativa","ZOS4-01 - C2H2 zinc finger protein, expressed","protein_coding"
"LOC_Os04g08060","No alias","Oryza sativa","ZOS4-03 - C2H2 zinc finger protein, expressed","protein_coding"
"LOC_Os04g08415","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os04g12800","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os04g33030","No alias","Oryza sativa","protein binding protein, putative, expressed","protein_coding"
"LOC_Os04g33400","No alias","Oryza sativa","OsFBLD2 - F-box, LRR and FBD domain containing protein, expressed","protein_coding"
"LOC_Os04g33490","No alias","Oryza sativa","neutral/alkaline invertase, putative, expressed","protein_coding"
"LOC_Os04g35930","No alias","Oryza sativa","OsFBX134 - F-box domain containing protein, expressed","protein_coding"
"LOC_Os04g42000","No alias","Oryza sativa","6,7-dimethyl-8-ribityllumazine synthase, chloroplast precursor, putative, expressed","protein_coding"
"LOC_Os04g48060","No alias","Oryza sativa","RFC2 - Putative clamp loader of PCNA, replication factor C subunit 2, expressed","protein_coding"
"LOC_Os04g56520","No alias","Oryza sativa","alpha-1,4-glucan-protein synthase, putative, expressed","protein_coding"
"LOC_Os05g05030","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os05g08560","No alias","Oryza sativa","transposon protein, putative, unclassified, expressed","protein_coding"
"LOC_Os05g14030","No alias","Oryza sativa","receptor kinase, putative, expressed","protein_coding"
"LOC_Os05g14370","No alias","Oryza sativa","WRKY82, expressed","protein_coding"
"LOC_Os05g29990","No alias","Oryza sativa","NAD dependent epimerase/dehydratase family domain containing protein, expressed","protein_coding"
"LOC_Os05g37790","No alias","Oryza sativa","hypothetical protein","protein_coding"
"LOC_Os05g38500","No alias","Oryza sativa","fasciclin-like arabinogalactan protein, putative, expressed","protein_coding"
"LOC_Os05g39610","No alias","Oryza sativa","exo70 exocyst complex subunit domain containing protein, expressed","protein_coding"
"LOC_Os05g47640","No alias","Oryza sativa","threonine synthase, chloroplast precursor, putative, expressed","protein_coding"
"LOC_Os06g06450","No alias","Oryza sativa","heat shock protein STI, putative, expressed","protein_coding"
"LOC_Os06g10140","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os06g12060","No alias","Oryza sativa","mTERF family protein, expressed","protein_coding"
"LOC_Os06g37510","No alias","Oryza sativa","tetraspanin family protein, putative, expressed","protein_coding"
"LOC_Os06g41110","No alias","Oryza sativa","tubulin binding cofactor C, putative, expressed","protein_coding"
"LOC_Os06g41920","No alias","Oryza sativa","EBNA-1, putative, expressed","protein_coding"
"LOC_Os06g46000","No alias","Oryza sativa","tubulin/FtsZ domain containing protein, putative, expressed","protein_coding"
"LOC_Os06g49190","No alias","Oryza sativa","LTPL154 - Protease inhibitor/seed storage/LTP family protein precursor, expressed","protein_coding"
"LOC_Os06g50100","No alias","Oryza sativa","tyrosine protein kinase domain containing protein, putative, expressed","protein_coding"
"LOC_Os07g07670","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os07g16320","No alias","Oryza sativa","retrotransposon protein, putative, unclassified, expressed","protein_coding"
"LOC_Os07g27450","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os07g35200","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os07g48510","No alias","Oryza sativa","thioredoxin, putative, expressed","protein_coding"
"LOC_Os08g07210","No alias","Oryza sativa","hypothetical protein","protein_coding"
"LOC_Os08g10608","No alias","Oryza sativa","ribosomal protein S17, putative, expressed","protein_coding"
"LOC_Os08g10730","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os08g31580","No alias","Oryza sativa","ethylene-responsive transcription factor, putative, expressed","protein_coding"
"LOC_Os08g32690","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os08g40860","No alias","Oryza sativa","RNA pseudouridine synthase, putative, expressed","protein_coding"
"LOC_Os08g43010","No alias","Oryza sativa","disease resistance RPP13-like protein 1, putative, expressed","protein_coding"
"LOC_Os09g01930","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os09g17680","No alias","Oryza sativa","NAD kinase, putative, expressed","protein_coding"
"LOC_Os09g30160","No alias","Oryza sativa","zinc finger, C3HC4 type domain containing protein, expressed","protein_coding"
"LOC_Os10g16930","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os10g19820","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os10g25000","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os10g26130","No alias","Oryza sativa","phenylalanyl-tRNA synthetase, putative, expressed","protein_coding"
"LOC_Os10g32780","No alias","Oryza sativa","RING zinc finger ankyrin protein, putative, expressed","protein_coding"
"LOC_Os10g35540","No alias","Oryza sativa","hydrolase, alpha/beta fold family domain containing protein, expressed","protein_coding"
"LOC_Os10g39660","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os11g04720","No alias","Oryza sativa","OsRR10  type-A response regulator, expressed","protein_coding"
"LOC_Os11g05614","No alias","Oryza sativa","no apical meristem protein, putative, expressed","protein_coding"
"LOC_Os11g08090","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os11g09710","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os11g09940","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os11g29100","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os11g37520","No alias","Oryza sativa","BTBT3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with tetratricopeptide repeats, expressed","protein_coding"
"LOC_Os12g01574","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os12g03980","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os12g13110","No alias","Oryza sativa","pentatricopeptide, putative, expressed","protein_coding"
"LOC_Os12g13320","No alias","Oryza sativa","argininosuccinate synthase, chloroplast precursor, putative, expressed","protein_coding"
"LOC_Os12g32992","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os12g35550","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os12g37510","No alias","Oryza sativa","UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed","protein_coding"
"LOC_Os12g39070","No alias","Oryza sativa","TATA-binding protein, putative, expressed","protein_coding"
"LOC_Os12g41670","No alias","Oryza sativa","expressed protein","protein_coding"
"MA_100087g0010","No alias","Picea abies","(at5g23400 : 447.0) Leucine-rich repeat (LRR) family protein; INVOLVED IN: signal transduction, defense response; LOCATED IN: cell wall; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT2G26380.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p93194|rpk1_iponi : 219.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 894.0) &  (original description: no original description)","protein_coding"
"MA_101171g0010","No alias","Picea abies","(at1g67750 : 487.0) Pectate lyase family protein; FUNCTIONS IN: pectate lyase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G63180.1); Has 1739 Blast hits to 1731 proteins in 272 species: Archae - 0; Bacteria - 767; Metazoa - 0; Fungi - 258; Plants - 701; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (p40973|pel_lillo : 334.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (reliability: 974.0) &  (original description: no original description)","protein_coding"
"MA_102349g0010","No alias","Picea abies","(at5g64570 : 473.0) Encodes a beta-d-xylosidase that belongs to family 3 of glycoside hydrolases.; beta-D-xylosidase 4 (XYL4); FUNCTIONS IN: xylan 1,4-beta-xylosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: xylan catabolic process; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: beta-xylosidase 3 (TAIR:AT5G09730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p83344|xynb_prupe : 400.0) Putative beta-D-xylosidase (EC 3.2.1.-) (PpAz152) (Fragment) - Prunus persica (Peach) & (reliability: 946.0) &  (original description: no original description)","protein_coding"
"MA_10290598g0010","No alias","Picea abies","(at5g13840 : 613.0) FIZZY-related 3 (FZR3); FUNCTIONS IN: signal transducer activity; INVOLVED IN: signal transduction; LOCATED IN: chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: FIZZY-related 2 (TAIR:AT4G22910.1). & (reliability: 1150.0) &  (original description: no original description)","protein_coding"
"MA_10425823g0010","No alias","Picea abies","(q852a1|expa7_orysa : 372.0) Expansin-A7 precursor (OsEXPA7) (Alpha-expansin-7) (OsEXP7) (OsaEXPa1.26) - Oryza sativa (Rice) & (at2g39700 : 365.0) putative expansin. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio).  Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.; expansin A4 (EXPA4); CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A16 (TAIR:AT3G55500.1); Has 2158 Blast hits to 2155 proteins in 155 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 41; Plants - 2085; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). & (reliability: 730.0) &  (original description: no original description)","protein_coding"
"MA_10425925g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_10426064g0010","No alias","Picea abies","(at4g01130 : 223.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G26430.1); Has 3308 Blast hits to 3260 proteins in 151 species: Archae - 0; Bacteria - 130; Metazoa - 0; Fungi - 52; Plants - 3122; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (q7y1x1|est_hevbr : 184.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 446.0) &  (original description: no original description)","protein_coding"
"MA_10426237g0010","No alias","Picea abies","(at4g02060 : 1090.0) Member of the minichromosome maintenance complex, involved in DNA replication initiation. Abundant in proliferating and  endocycling tissues. Localized in the nucleus during G1, S and G2 phases of the  cell cycle, and are released into the cytoplasmic compartment during mitosis. Binds chromatin.; PROLIFERA (PRL); CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), ATPase, AAA+ type, core (InterPro:IPR003593), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 7 (InterPro:IPR008050); BEST Arabidopsis thaliana protein match is: minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT5G44635.1). & (q43704|mcm3_maize : 281.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 2180.0) &  (original description: no original description)","protein_coding"
"MA_10426277g0020","No alias","Picea abies","(at5g51600 : 280.0) Mutant has defective roots. Essential for giant cell ontogenesis. Role in organizing the mitotic microtubule array during both early and late mitosis in all plant organs.; PLEIADE (PLE); CONTAINS InterPro DOMAIN/s: Microtubule-associated protein, MAP65/ASE1-type (InterPro:IPR007145); BEST Arabidopsis thaliana protein match is: microtubule-associated protein 65-4 (TAIR:AT3G60840.1); Has 4514 Blast hits to 3795 proteins in 427 species: Archae - 120; Bacteria - 292; Metazoa - 2464; Fungi - 290; Plants - 515; Viruses - 1; Other Eukaryotes - 832 (source: NCBI BLink). & (reliability: 560.0) &  (original description: no original description)","protein_coding"
"MA_10426777g0010","No alias","Picea abies","(at2g07690 : 693.0) Member of the minichromosome maintenance complex, involved in DNA replication initiation. Abundant in proliferating and  endocycling tissues. Localized in the nucleus during G1, S and G2 phases of the  cell cycle, and are released into the cytoplasmic compartment during mitosis. Binds chromatin.; MINICHROMOSOME MAINTENANCE 5 (MCM5); FUNCTIONS IN: DNA-dependent ATPase activity, DNA binding, ATP binding; INVOLVED IN: cell proliferation, DNA-dependent DNA replication initiation, DNA unwinding involved in replication; LOCATED IN: nuclear chromatin, nucleus, cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 5 (InterPro:IPR008048); BEST Arabidopsis thaliana protein match is: Minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT2G16440.1). & (q43704|mcm3_maize : 279.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 1386.0) &  (original description: no original description)","protein_coding"
"MA_10426822g0020","No alias","Picea abies","(at1g67750 : 481.0) Pectate lyase family protein; FUNCTIONS IN: pectate lyase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G63180.1); Has 1739 Blast hits to 1731 proteins in 272 species: Archae - 0; Bacteria - 767; Metazoa - 0; Fungi - 258; Plants - 701; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (p40973|pel_lillo : 342.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (reliability: 962.0) &  (original description: no original description)","protein_coding"
"MA_10427588g0010","No alias","Picea abies","(at3g57060 : 577.0) binding; FUNCTIONS IN: binding; INVOLVED IN: mitosis, chromosome condensation; LOCATED IN: nucleus, condensin complex; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Non-SMC condensin subunit, XCAP-D2/Cnd1 (InterPro:IPR007673), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: binding (TAIR:AT4G15890.1). & (reliability: 1154.0) &  (original description: no original description)","protein_coding"
"MA_10427897g0010","No alias","Picea abies","(q7x6j9|exb17_orysa : 304.0) Expansin-B17 precursor (OsEXPB17) (Beta-expansin-17) (OsaEXPb1.13) - Oryza sativa (Rice) & (at2g20750 : 303.0) member of BETA-EXPANSINS. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin B1 (EXPB1); INVOLVED IN: plant-type cell wall organization, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin B3 (TAIR:AT4G28250.1); Has 2076 Blast hits to 2069 proteins in 143 species: Archae - 0; Bacteria - 15; Metazoa - 0; Fungi - 9; Plants - 2024; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (reliability: 606.0) &  (original description: no original description)","protein_coding"
"MA_10430352g0010","No alias","Picea abies","(at4g14900 : 191.0) FRIGIDA-like protein; CONTAINS InterPro DOMAIN/s: Frigida-like (InterPro:IPR012474); BEST Arabidopsis thaliana protein match is: FRIGIDA-like protein (TAIR:AT3G22440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 382.0) &  (original description: no original description)","protein_coding"
"MA_10430509g0010","No alias","Picea abies","(at3g19050 : 971.0) PHRAGMOPLAST ORIENTING KINESIN 2 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK2 constructs were broader than those for POK1; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls.; phragmoplast orienting kinesin 2 (POK2); FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: cytokinesis; EXPRESSED IN: root vascular system, primary root tip, lateral root primordium; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: phragmoplast orienting kinesin 1 (TAIR:AT3G17360.1); Has 204267 Blast hits to 80386 proteins in 3219 species: Archae - 3327; Bacteria - 35963; Metazoa - 90351; Fungi - 17822; Plants - 12667; Viruses - 746; Other Eukaryotes - 43391 (source: NCBI BLink). & (p46869|fla10_chlre : 245.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (gnl|cdd|68872 : 99.0) no description available & (reliability: 1942.0) &  (original description: no original description)","protein_coding"
"MA_10430569g0010","No alias","Picea abies","(p49730|rir2_tobac : 535.0) Ribonucleoside-diphosphate reductase small chain (EC 1.17.4.1) (Ribonucleotide reductase small subunit) (Ribonucleoside-diphosphate reductase R2 subunit) - Nicotiana tabacum (Common tobacco) & (at3g27060 : 527.0) Encodes one of the 3 ribonucleotide reductase (RNR) small subunit genes. TSO2 transcription occurs predominantly at the S-phase of the cell cycle and its expression pattern is consistent with its role in dNDP  biosynthesis during DNA replication in actively dividing cells. Critical for cell cycle progression, DNA damage repair and plant development.; TSO MEANING 'UGLY' IN CHINESE 2 (TSO2); FUNCTIONS IN: oxidoreductase activity, transition metal ion binding, ribonucleoside-diphosphate reductase activity; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase-related (InterPro:IPR012348), Ribonucleotide reductase (InterPro:IPR000358), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078); BEST Arabidopsis thaliana protein match is: ribonucleotide reductase 2A (TAIR:AT3G23580.1); Has 9355 Blast hits to 9350 proteins in 2299 species: Archae - 34; Bacteria - 4270; Metazoa - 263; Fungi - 240; Plants - 185; Viruses - 729; Other Eukaryotes - 3634 (source: NCBI BLink). & (reliability: 1054.0) &  (original description: no original description)","protein_coding"
"MA_10431686g0010","No alias","Picea abies","(at1g18090 : 401.0) 5'-3' exonuclease family protein; FUNCTIONS IN: DNA binding, catalytic activity, nuclease activity; INVOLVED IN: DNA repair; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: XPG conserved site (InterPro:IPR019974), XPG N-terminal (InterPro:IPR006085), DNA repair protein (XPGC)/yeast Rad (InterPro:IPR006084), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), Helix-hairpin-helix motif, class 2 (InterPro:IPR008918), XPG/RAD2 endonuclease (InterPro:IPR006086); BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT1G29630.2); Has 2139 Blast hits to 2052 proteins in 399 species: Archae - 267; Bacteria - 71; Metazoa - 522; Fungi - 572; Plants - 187; Viruses - 16; Other Eukaryotes - 504 (source: NCBI BLink). & (q9sxq6|fen1a_orysa : 94.0) Flap endonuclease 1a (EC 3.1.-.-) (OsFEN-1a) - Oryza sativa (Rice) & (reliability: 802.0) &  (original description: no original description)","protein_coding"
"MA_10431892g0020","No alias","Picea abies","(at3g42660 : 692.0) transducin family protein / WD-40 repeat family protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), Protein of unknown function DUF3639 (InterPro:IPR022100), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G23430.1); Has 41589 Blast hits to 20655 proteins in 706 species: Archae - 66; Bacteria - 8583; Metazoa - 14223; Fungi - 8894; Plants - 4578; Viruses - 3; Other Eukaryotes - 5242 (source: NCBI BLink). & (reliability: 1384.0) &  (original description: no original description)","protein_coding"
"MA_10432114g0010","No alias","Picea abies","(at2g01410 : 282.0) NHL domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT2G16760.1); Has 137 Blast hits to 137 proteins in 39 species: Archae - 0; Bacteria - 57; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 564.0) &  (original description: no original description)","protein_coding"
"MA_10432758g0010","No alias","Picea abies","(p35684|rl3_orysj : 667.0) 60S ribosomal protein L3 OS=Oryza sativa subsp. japonica GN=RPL3 PE=2 SV=2 & (at1g43170 : 656.0) Encodes a cytoplasmic ribosomal protein.; ribosomal protein 1 (RP1); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, embryo development ending in seed dormancy; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L3 (InterPro:IPR000597), Ribosomal protein L3, conserved site (InterPro:IPR019926), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: R-protein L3 B (TAIR:AT1G61580.1). & (reliability: 1312.0) &  (original description: no original description)","protein_coding"
"MA_10434805g0020","No alias","Picea abies","(q00268|pcna1_dauca : 467.0) Proliferating cell nuclear antigen (PCNA) (Cyclin) - Daucus carota (Carrot) & (at1g07370 : 456.0) Encodes putative proliferating cell nuclear antigen involved in cell cycle regulation.; proliferating cellular nuclear antigen 1 (PCNA1); CONTAINS InterPro DOMAIN/s: Proliferating cell nuclear antigen, PCNA (InterPro:IPR000730), Proliferating cell nuclear antigen, PCNA, C-terminal (InterPro:IPR022649), Proliferating cell nuclear antigen, PCNA, conserved site (InterPro:IPR022659), Proliferating cell nuclear antigen, PCNA, N-terminal (InterPro:IPR022648); BEST Arabidopsis thaliana protein match is: proliferating cell nuclear antigen 2 (TAIR:AT2G29570.1); Has 1857 Blast hits to 1845 proteins in 456 species: Archae - 391; Bacteria - 0; Metazoa - 315; Fungi - 169; Plants - 159; Viruses - 71; Other Eukaryotes - 752 (source: NCBI BLink). & (reliability: 912.0) &  (original description: no original description)","protein_coding"
"MA_10435567g0020","No alias","Picea abies","(at5g67270 : 286.0) encodes a homolog of animal microtubule-end-binding protein. There are two other members of this family. EB1 forms foci at regions where the minus ends of microtubules are gathered during mitosis and early cytokinesis.; end binding protein 1C (EB1C); CONTAINS InterPro DOMAIN/s: Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715), EB1, C-terminal (InterPro:IPR004953); BEST Arabidopsis thaliana protein match is: microtubule end binding protein EB1A (TAIR:AT3G47690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 572.0) &  (original description: no original description)","protein_coding"
"MA_10436014g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_10436014g0020","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_10436793g0010","No alias","Picea abies","(at4g29910 : 345.0) Origin Recognition Complex subunit 5. Involved in the initiation of DNA replication. Interacts strongly with all ORC subunits.; origin recognition complex protein 5 (ORC5); CONTAINS InterPro DOMAIN/s: Origin recognition complex, subunit 5 (InterPro:IPR020796); Has 287 Blast hits to 283 proteins in 127 species: Archae - 0; Bacteria - 0; Metazoa - 140; Fungi - 92; Plants - 43; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 690.0) &  (original description: no original description)","protein_coding"
"MA_10437089g0010","No alias","Picea abies","(at4g39920 : 276.0) Microtubule-folding cofactor, produces assembly-competent alpha-/beta-tubulin heterodimers.; PORCINO (POR); FUNCTIONS IN: binding; INVOLVED IN: tubulin complex assembly, cytokinesis; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CARP motif (InterPro:IPR006599), C-CAP/cofactor C-like domain (InterPro:IPR017901), Tubulin binding cofactor C (InterPro:IPR012945); Has 497 Blast hits to 493 proteins in 165 species: Archae - 0; Bacteria - 11; Metazoa - 222; Fungi - 88; Plants - 54; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (reliability: 552.0) &  (original description: no original description)","protein_coding"
"MA_106416g0010","No alias","Picea abies","(at1g20930 : 455.0) Cyclin-dependent kinase, expressed in flowers and suspension cell culture, expression peaks during M phase in synchronized cultures. Required for proper organization of the shoot apical meristem and for hormone signaling. Expressed in the shoot apical meristem. Involved in regulation of the G2/M transition of the mitotic cell cycle.; cyclin-dependent kinase B2;2 (CDKB2;2); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cyclin-dependent kinase B2;1 (TAIR:AT1G76540.1); Has 109034 Blast hits to 107606 proteins in 3051 species: Archae - 93; Bacteria - 11427; Metazoa - 41458; Fungi - 12141; Plants - 24398; Viruses - 437; Other Eukaryotes - 19080 (source: NCBI BLink). & (q38774|cdc2c_antma : 452.0) Cell division control protein 2 homolog C (EC 2.7.11.22) (EC 2.7.11.23) - Antirrhinum majus (Garden snapdragon) & (reliability: 910.0) &  (original description: no original description)","protein_coding"
"MA_11159g0010","No alias","Picea abies","(at5g18700 : 1141.0) Encodes a microtubule-associated kinase-like protein RUNKEL (RUK). Contains a putative serine/threonine kinase domain and a microtubule-binding domain. RUK directly binds to microtubules in vitro and colocalizes with mitotic preprophase band, spindle, and phragmoplast in vivo.  Required for cell plate expansion in cytokinesis.; Protein kinase family protein with ARM repeat domain; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Armadillo-like helical (InterPro:IPR011989), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G33940.2); Has 133671 Blast hits to 131461 proteins in 4761 species: Archae - 230; Bacteria - 15366; Metazoa - 49337; Fungi - 13216; Plants - 32681; Viruses - 728; Other Eukaryotes - 22113 (source: NCBI BLink). & (q5qn75|m2k1_orysa : 92.4) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 2282.0) &  (original description: no original description)","protein_coding"
"MA_121643g0010","No alias","Picea abies","(at1g46480 : 128.0) Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. Proteins in this family contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box. This protein also contains an acidic domain approximately 10 residues upstream of the WUS box. Part of the TDIF-TDR-WOX4 signaling pathway that plays a crucial role in the maintenance of the vascular meristem organization during secondary growth.; WUSCHEL related homeobox 4 (WOX4); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 1 (TAIR:AT3G18010.1); Has 537 Blast hits to 535 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 537; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q8ll11|wus_pethy : 107.0) Protein WUSCHEL (PhWUS) (Protein TERMINATOR) - Petunia hybrida (Petunia) & (reliability: 256.0) &  (original description: no original description)","protein_coding"
"MA_12899g0010","No alias","Picea abies","(at3g19240 : 731.0) Vacuolar import/degradation, Vid27-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Vacuolar import/degradation, Vid27-related (InterPro:IPR013863); BEST Arabidopsis thaliana protein match is: Vacuolar import/degradation, Vid27-related protein (TAIR:AT4G33400.1); Has 312 Blast hits to 307 proteins in 136 species: Archae - 0; Bacteria - 1; Metazoa - 11; Fungi - 168; Plants - 82; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (reliability: 1462.0) &  (original description: no original description)","protein_coding"
"MA_133272g0010","No alias","Picea abies","(at3g23890 : 1518.0) Encodes a topoisomerase II that is highly expressed in young seedlings. The protein is localized in the nucleus and gene expression levels are increased in proliferative tissues.; topoisomerase II (TOPII); CONTAINS InterPro DOMAIN/s: DNA topoisomerase, type IIA, subunit A/C-terminal (InterPro:IPR002205), DNA topoisomerase, type IIA, conserved site (InterPro:IPR018522), DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta (InterPro:IPR013758), DNA topoisomerase, type IIA, subunit B, domain 2 (InterPro:IPR013506), DNA topoisomerase, type IIA, subunit A, alpha-helical (InterPro:IPR013757), ATPase-like, ATP-binding domain (InterPro:IPR003594), DNA topoisomerase, type IIA, subunit B/N-terminal, alpha-beta (InterPro:IPR013759), DNA topoisomerase, type IIA, subunit B/N-terminal (InterPro:IPR001241), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), DNA topoisomerase II, eukaryotic-type (InterPro:IPR001154), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), DNA topoisomerase, type IIA, central (InterPro:IPR013760); BEST Arabidopsis thaliana protein match is: DNA GYRASE B2 (TAIR:AT5G04130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o24308|top2_pea : 1505.0) DNA topoisomerase 2 (EC 5.99.1.3) (DNA topoisomerase II) (PsTopII) - Pisum sativum (Garden pea) & (reliability: 3036.0) &  (original description: no original description)","protein_coding"
"MA_13367g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_13386g0010","No alias","Picea abies","(at2g35710 : 503.0) Nucleotide-diphospho-sugar transferases superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process, biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT4G16600.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1006.0) &  (original description: no original description)","protein_coding"
"MA_134781g0010","No alias","Picea abies","(at1g23790 : 254.0) Plant protein of unknown function (DUF936); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF936, plant (InterPro:IPR010341); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF936) (TAIR:AT1G70340.1); Has 265 Blast hits to 216 proteins in 30 species: Archae - 0; Bacteria - 7; Metazoa - 9; Fungi - 7; Plants - 237; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 508.0) &  (original description: no original description)","protein_coding"
"MA_138102g0010","No alias","Picea abies","(at5g46280 : 952.0) MINICHROMOSOME MAINTENANCE 3 (MCM3); FUNCTIONS IN: nucleoside-triphosphatase activity, DNA-dependent ATPase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: cell proliferation, DNA-dependent DNA replication initiation, DNA unwinding involved in replication; LOCATED IN: nuclear chromatin; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), ATPase, AAA+ type, core (InterPro:IPR003593), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 3 (InterPro:IPR008046); BEST Arabidopsis thaliana protein match is: Minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT4G02060.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43704|mcm3_maize : 809.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 1904.0) &  (original description: no original description)","protein_coding"
"MA_138441g0010","No alias","Picea abies","(at2g15230 : 276.0) Lipase active on medium and short chain triacylglycerols, but not on phospho- or galactolipids. Active between pH4 and 7 with an optimum at pH6. Knock-out mutant has not obvious phenotype. Predicted to be extracellular.; lipase 1 (LIP1); CONTAINS InterPro DOMAIN/s: AB-hydrolase-associated lipase region (InterPro:IPR006693), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: Myzus persicae-induced lipase 1 (TAIR:AT5G14180.1); Has 1912 Blast hits to 1877 proteins in 247 species: Archae - 0; Bacteria - 112; Metazoa - 1231; Fungi - 287; Plants - 167; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). & (reliability: 552.0) &  (original description: no original description)","protein_coding"
"MA_1482g0010","No alias","Picea abies","(p49730|rir2_tobac : 556.0) Ribonucleoside-diphosphate reductase small chain (EC 1.17.4.1) (Ribonucleotide reductase small subunit) (Ribonucleoside-diphosphate reductase R2 subunit) - Nicotiana tabacum (Common tobacco) & (at3g27060 : 542.0) Encodes one of the 3 ribonucleotide reductase (RNR) small subunit genes. TSO2 transcription occurs predominantly at the S-phase of the cell cycle and its expression pattern is consistent with its role in dNDP  biosynthesis during DNA replication in actively dividing cells. Critical for cell cycle progression, DNA damage repair and plant development.; TSO MEANING 'UGLY' IN CHINESE 2 (TSO2); FUNCTIONS IN: oxidoreductase activity, transition metal ion binding, ribonucleoside-diphosphate reductase activity; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase-related (InterPro:IPR012348), Ribonucleotide reductase (InterPro:IPR000358), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078); BEST Arabidopsis thaliana protein match is: ribonucleotide reductase 2A (TAIR:AT3G23580.1); Has 9355 Blast hits to 9350 proteins in 2299 species: Archae - 34; Bacteria - 4270; Metazoa - 263; Fungi - 240; Plants - 185; Viruses - 729; Other Eukaryotes - 3634 (source: NCBI BLink). & (reliability: 1084.0) &  (original description: no original description)","protein_coding"
"MA_15029g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_15064g0010","No alias","Picea abies","(at5g60210 : 180.0) ROP interactive partner 5 (RIP5); BEST Arabidopsis thaliana protein match is: ROP interactive partner 3 (TAIR:AT2G37080.1). & (reliability: 348.0) &  (original description: no original description)","protein_coding"
"MA_15709g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_15713g0010","No alias","Picea abies","(at5g44635 : 1125.0) MINICHROMOSOME MAINTENANCE 6 (MCM6); FUNCTIONS IN: DNA-dependent ATPase activity, DNA binding, ATP binding; INVOLVED IN: cell proliferation, DNA-dependent DNA replication initiation, DNA unwinding involved in replication; LOCATED IN: nuclear chromatin; EXPRESSED IN: shoot apex; EXPRESSED DURING: IL.00 inflorescence just visible; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 6 (InterPro:IPR008049); BEST Arabidopsis thaliana protein match is: Minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT2G16440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q43704|mcm3_maize : 288.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 2250.0) &  (original description: no original description)","protein_coding"
"MA_15755g0030","No alias","Picea abies","(at2g03200 : 348.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G01300.1); Has 2634 Blast hits to 2609 proteins in 245 species: Archae - 0; Bacteria - 0; Metazoa - 187; Fungi - 441; Plants - 1862; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). & (q6yny7|asp1_orysa : 100.0) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (OSAP1) (Nucellin-like protein) - Oryza sativa (Rice) & (reliability: 696.0) &  (original description: no original description)","protein_coding"
"MA_158556g0010","No alias","Picea abies","(at2g21790 : 1386.0) encodes large subunit of ribonucleotide reductase involved in the production of deoxyribonucleoside triphosphates (dNTPs) for DNA replication and repair; ribonucleotide reductase 1 (RNR1); FUNCTIONS IN: ribonucleoside-diphosphate reductase activity, ATP binding; INVOLVED IN: response to cadmium ion, DNA replication, deoxyribonucleoside triphosphate biosynthetic process; LOCATED IN: ribonucleoside-diphosphate reductase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase large subunit, N-terminal (InterPro:IPR013509), Ribonucleoside-diphosphate reductase, alpha subunit (InterPro:IPR013346), ATP-cone (InterPro:IPR005144), Ribonucleotide reductase large subunit, C-terminal (InterPro:IPR000788), Ribonucleotide reductase R1 subunit, N-terminal (InterPro:IPR008926); Has 15326 Blast hits to 14804 proteins in 2790 species: Archae - 206; Bacteria - 6388; Metazoa - 177; Fungi - 215; Plants - 88; Viruses - 606; Other Eukaryotes - 7646 (source: NCBI BLink). & (reliability: 2772.0) &  (original description: no original description)","protein_coding"
"MA_158953g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_160146g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_161013g0010","No alias","Picea abies","(at1g76160 : 735.0) SKU5 similar 5 (sks5); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5-similar 6 (TAIR:AT1G41830.1); Has 5094 Blast hits to 5026 proteins in 887 species: Archae - 12; Bacteria - 1432; Metazoa - 265; Fungi - 1965; Plants - 1269; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (q00624|aso_brana : 629.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (reliability: 1446.0) &  (original description: no original description)","protein_coding"
"MA_16730g0010","No alias","Picea abies","(at5g38110 : 272.0) This gene is predicted to encode a silencing group A protein. Plant lines expressing RNAi constructs directed against SGA1 have reduced levels of agrobacterium-mediated root transformation.; anti- silencing function 1b (ASF1B); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: DNA mediated transformation, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Histone chaperone,  ASF1-like (InterPro:IPR006818); BEST Arabidopsis thaliana protein match is: ASF1 like histone chaperone (TAIR:AT1G66740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 544.0) &  (original description: no original description)","protein_coding"
"MA_17339g0040","No alias","Picea abies","(at2g19440 : 475.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT1G64760.2); Has 2685 Blast hits to 2621 proteins in 154 species: Archae - 0; Bacteria - 4; Metazoa - 5; Fungi - 44; Plants - 2618; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (p52408|e13b_prupe : 184.0) Glucan endo-1,3-beta-glucosidase, basic isoform precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (PpGns1) - Prunus persica (Peach) & (reliability: 950.0) &  (original description: no original description)","protein_coding"
"MA_177265g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_17738g0010","No alias","Picea abies","(at3g50070 : 241.0) Encode CYCD3;3, a CYCD3 D-type cyclin.  Important for determining cell number in developing lateral organs.  Mediating cytokinin effects in apical growth and development.; CYCLIN D3;3 (CYCD3;3); FUNCTIONS IN: cyclin-dependent protein kinase activity; INVOLVED IN: regulation of cell cycle, regulation of cell proliferation; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN D3;2 (TAIR:AT5G67260.1); Has 3177 Blast hits to 3175 proteins in 306 species: Archae - 0; Bacteria - 0; Metazoa - 1493; Fungi - 379; Plants - 953; Viruses - 3; Other Eukaryotes - 349 (source: NCBI BLink). & (reliability: 482.0) &  (original description: no original description)","protein_coding"
"MA_17859g0010","No alias","Picea abies","(at3g51740 : 440.0) encodes a leucine-repeat receptor kinase expressed in inflorescence meristem. Locus association was made from performing sequence analysis with IMK3 (MRLK) whose locus association was provided by the authors.; inflorescence meristem receptor-like kinase 2 (IMK2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: cell wall, plasma membrane, membrane, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: meristematic receptor-like  kinase (TAIR:AT3G56100.1); Has 188484 Blast hits to 128319 proteins in 4033 species: Archae - 136; Bacteria - 17470; Metazoa - 63423; Fungi - 9529; Plants - 75715; Viruses - 437; Other Eukaryotes - 21774 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 276.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 880.0) &  (original description: no original description)","protein_coding"
"MA_186345g0010","No alias","Picea abies","(p22195|per1_arahy : 405.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (at5g05340 : 396.0) Peroxidase superfamily protein; FUNCTIONS IN: protein binding, peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 792.0) &  (original description: no original description)","protein_coding"
"MA_187851g0010","No alias","Picea abies","(at4g21070 : 105.0) Encodes AtBRCA1, an ortholog of the human breast cancer susceptibility gene 1. Contains one N-terminal RING finger, two C-terminal BRCT and the p300/CBP interacting domain. Strongly induced by gamma rays, consistent with a putative role in DNA repair and in cell cycle control.; breast cancer susceptibility1 (BRCA1); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: DNA repair, response to gamma radiation; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), BRCA1 (InterPro:IPR011364), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: breast cancer associated RING 1 (TAIR:AT1G04020.2); Has 8999 Blast hits to 8407 proteins in 1134 species: Archae - 0; Bacteria - 191; Metazoa - 6557; Fungi - 520; Plants - 721; Viruses - 32; Other Eukaryotes - 978 (source: NCBI BLink). & (reliability: 210.0) &  (original description: no original description)","protein_coding"
"MA_190437g0010","No alias","Picea abies","(at2g01610 : 107.0) Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT1G14890.1); Has 850 Blast hits to 843 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 850; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p17407|21kd_dauca : 91.3) 21 kDa protein precursor (1.2 protein) - Daucus carota (Carrot) & (reliability: 214.0) &  (original description: no original description)","protein_coding"
"MA_19105g0030","No alias","Picea abies","(at3g52500 : 298.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cell wall, membrane, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G45120.1); Has 2297 Blast hits to 2281 proteins in 180 species: Archae - 0; Bacteria - 0; Metazoa - 245; Fungi - 122; Plants - 1871; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (reliability: 596.0) &  (original description: no original description)","protein_coding"
"MA_19215g0010","No alias","Picea abies","(p34800|ccn1_antma : 321.0) G2/mitotic-specific cyclin-1 - Antirrhinum majus (Garden snapdragon) & (at3g11520 : 295.0) Encodes a B-type mitotic cyclin.; CYCLIN B1;3 (CYCB1;3); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: regulation of cell cycle, response to cyclopentenone, cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin family protein (TAIR:AT5G06150.1); Has 4455 Blast hits to 4454 proteins in 375 species: Archae - 0; Bacteria - 0; Metazoa - 2045; Fungi - 567; Plants - 1152; Viruses - 37; Other Eukaryotes - 654 (source: NCBI BLink). & (reliability: 590.0) &  (original description: no original description)","protein_coding"
"MA_19628g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_20109g0010","No alias","Picea abies","(at2g35880 : 125.0) TPX2 (targeting protein for Xklp2) protein family; FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xklp2 targeting protein (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: TPX2 (targeting protein for Xklp2) protein family (TAIR:AT4G32330.3); Has 16554 Blast hits to 10282 proteins in 807 species: Archae - 18; Bacteria - 1410; Metazoa - 6904; Fungi - 1967; Plants - 895; Viruses - 63; Other Eukaryotes - 5297 (source: NCBI BLink). & (reliability: 250.0) &  (original description: no original description)","protein_coding"
"MA_20414g0010","No alias","Picea abies","(at2g37960 : 107.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G54060.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 193.4) &  (original description: no original description)","protein_coding"
"MA_213048g0010","No alias","Picea abies","(p50567|h2a_chlre : 115.0) Histone H2A - Chlamydomonas reinhardtii & (at1g54690 : 112.0) Encodes HTA3, a histone H2A protein. H2AX is a meiosis-specific isoform of histone H2A.  Upon DSB formation, rapid accumulation of phosphorylated  H2AX (γ-H2AX) occurs around the break site. 
H2AX foci accumulate in early G2.  Immunolocalization studies in spread preparations of  wild-type meiocytes at G2/early leptotene revealed  the accumulation of numerous rather diffuse γ-H2AX  foci throughout the chromatin. However,  their accumulation is not contemporaneous with  that of AtSPO11-1. At 3 h post-S, no γ-H2AX  foci are detected. During the 3- to 5-h window when  AtSPO11-1 foci rapidly disappear, there is an  equally swift accumulation of γ-H2AX to a maximum  of >50 diffuse foci. The level of γH2AX then remains  constant for a further 13 h before undergoing a  gradual decrease to 10ñ20 foci in the 18- to 24-h post-S  period. By 30 h the foci have disappeared from the chromatin.; gamma histone variant H2AX (GAMMA-H2AX); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2A (InterPro:IPR002119), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT1G08880.1); Has 3932 Blast hits to 3927 proteins in 364 species: Archae - 0; Bacteria - 0; Metazoa - 2549; Fungi - 335; Plants - 612; Viruses - 4; Other Eukaryotes - 432 (source: NCBI BLink). & (reliability: 224.0) &  (original description: no original description)","protein_coding"
"MA_216572g0010","No alias","Picea abies","(at1g02800 : 571.0) Encodes a protein with similarity to endo-1,4-b-glucanases and is a   member of Glycoside Hydrolase Family 9. CEL2 is induced by nemotodes and is expressed in syncitia induced by  Heterodera schachtii.May be involved in the development and function of syncitia.; cellulase 2 (CEL2); FUNCTIONS IN: cellulase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: response to nematode, pattern specification process; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9B13 (TAIR:AT4G02290.1); Has 1817 Blast hits to 1800 proteins in 268 species: Archae - 2; Bacteria - 651; Metazoa - 181; Fungi - 17; Plants - 925; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (q8lq92|gun3_orysa : 555.0) Endoglucanase 3 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 3) (OsGLU8) - Oryza sativa (Rice) & (reliability: 1142.0) &  (original description: no original description)","protein_coding"
"MA_271027g0010","No alias","Picea abies",""(at2g30260 : 151.0) encodes U2B"", which is a component of the U2 snRNP complex. Its precise role in pre-mRNA splicing is still unknown. It has been suggested that U2B0 may not be required for the splicing reaction itself but may have a role in U2 snRNP biogenesis. Deletion analysis of the U2B0 gene fusion has identified the N-terminal RNP-80 motif as sufficient for localization to the coiled  body and the nucleus.; U2 small nuclear ribonucleoprotein B (U2B''); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: cis assembly of pre-catalytic spliceosome; LOCATED IN: nucleoplasm, Cajal body, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G06960.1); Has 1885 Blast hits to 1858 proteins in 260 species: Archae - 0; Bacteria - 2; Metazoa - 926; Fungi - 414; Plants - 327; Viruses - 1; Other Eukaryotes - 215 (source: NCBI BLink). & (reliability: 302.0) &  (original description: no original description)"","protein_coding"
"MA_27625g0020","No alias","Picea abies","(at1g65470 : 348.0) Chromatin Assembly Factor-1 (CAF-1) p150 subunit. Mutants have reduced heterochromatin content.  In Arabidopsis, the three CAF-1 subunits are encoded by FAS1, FAS2 and, most likely, MSI1, respectively.  Mutations in FAS1 or FAS2 lead to increased frequency of homologous recombination and T-DNA integration in Arabidopsis.; FASCIATA 1 (FAS1); FUNCTIONS IN: histone binding; INVOLVED IN: in 11 processes; LOCATED IN: chromatin assembly complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chromatin assembly factor 1 subunit A (InterPro:IPR022043). & (reliability: 696.0) &  (original description: no original description)","protein_coding"
"MA_2814g0010","No alias","Picea abies","(at3g48160 : 246.0) E2F-like protein, an inhibitor of the endocycle, preserves the mitotic state of proliferating cells by suppressing transcription of genes that are required for cells to enter the DNA endoreduplication cycle.; DP-E2F-like 1 (DEL1); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription factor E2F/dimerisation partner (TDP) (InterPro:IPR003316), E2F Family (InterPro:IPR015633); BEST Arabidopsis thaliana protein match is: DP-E2F-like protein 3 (TAIR:AT3G01330.1); Has 1182 Blast hits to 869 proteins in 113 species: Archae - 0; Bacteria - 0; Metazoa - 722; Fungi - 9; Plants - 301; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (reliability: 492.0) &  (original description: no original description)","protein_coding"
"MA_28323g0010","No alias","Picea abies","(at5g11300 : 355.0) mitotic-like cyclin, core cell cycle gene that is expressed only in roots (RT_PCR), portions with mitotic activity only (whole mount in situ).; mitotic-like cyclin 3B from Arabidopsis (CYC3B); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin (InterPro:IPR006670), G2/mitotic-specific cyclin A (InterPro:IPR015453), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400); BEST Arabidopsis thaliana protein match is: cyclin a2;1 (TAIR:AT5G25380.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p25010|ccnal_dauca : 309.0) G2/mitotic-specific cyclin C13-1 (A-like cyclin) (Fragment) - Daucus carota (Carrot) & (reliability: 710.0) &  (original description: no original description)","protein_coding"
"MA_28575g0010","No alias","Picea abies","(at5g47500 : 447.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G19730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o04887|pme2_citsi : 165.0) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Citrus sinensis (Sweet orange) & (reliability: 894.0) &  (original description: no original description)","protein_coding"
"MA_308999g0020","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_30958g0010","No alias","Picea abies","(at3g46940 : 233.0) DUTP-PYROPHOSPHATASE-LIKE 1 (DUT1); FUNCTIONS IN: hydrolase activity, dUTP diphosphatase activity; INVOLVED IN: DNA repair, 2'-deoxyribonucleotide metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DeoxyUTP pyrophosphatase domain, subfamily 1, (InterPro:IPR008181), DeoxyUTP pyrophosphatase domain (InterPro:IPR008180); Has 7764 Blast hits to 7750 proteins in 2463 species: Archae - 14; Bacteria - 4311; Metazoa - 248; Fungi - 161; Plants - 56; Viruses - 831; Other Eukaryotes - 2143 (source: NCBI BLink). & (reliability: 466.0) &  (original description: no original description)","protein_coding"
"MA_32668g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_331201g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_353910g0010","No alias","Picea abies","(at3g17860 : 87.4) JAZs are direct targets of the SCFCOI1 E3 ubiquitin-ligase and JA treatment  induces their proteasome-mediated degradation. Furthermore, JAI3 negatively  regulates the key transcriptional activator of JA responses, AtMYC2. The C-terminal portion of JAZ3, including the Jas domain, appears to be important for JAZ3-COI1 binding in the presence of coronatine.; jasmonate-zim-domain protein 3 (JAZ3); FUNCTIONS IN: protein binding; INVOLVED IN: jasmonic acid mediated signaling pathway; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain-like (InterPro:IPR018467); BEST Arabidopsis thaliana protein match is: jasmonate-zim-domain protein 4 (TAIR:AT1G48500.1); Has 405 Blast hits to 373 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 362; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). & (reliability: 174.8) &  (original description: no original description)","protein_coding"
"MA_36686g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_381787g0010","No alias","Picea abies","(at1g67820 : 313.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C,  manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT2G30020.1); Has 6733 Blast hits to 6560 proteins in 362 species: Archae - 6; Bacteria - 120; Metazoa - 1758; Fungi - 815; Plants - 2713; Viruses - 9; Other Eukaryotes - 1312 (source: NCBI BLink). & (reliability: 626.0) &  (original description: no original description)","protein_coding"
"MA_4122248g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_41268g0010","No alias","Picea abies","(at1g12570 : 455.0) Glucose-methanol-choline (GMC) oxidoreductase family protein; FUNCTIONS IN: aldehyde-lyase activity, oxidoreductase activity, acting on CH-OH group of donors, FAD binding; INVOLVED IN: alcohol metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Glucose-methanol-choline oxidoreductase, N-terminal (InterPro:IPR000172), Glucose-methanol-choline oxidoreductase (InterPro:IPR012132), Glucose-methanol-choline oxidoreductase, C-terminal (InterPro:IPR007867); BEST Arabidopsis thaliana protein match is: Glucose-methanol-choline (GMC) oxidoreductase family protein (TAIR:AT5G51950.1); Has 10555 Blast hits to 10382 proteins in 1112 species: Archae - 4; Bacteria - 3926; Metazoa - 806; Fungi - 1507; Plants - 299; Viruses - 12; Other Eukaryotes - 4001 (source: NCBI BLink). & (reliability: 896.0) &  (original description: no original description)","protein_coding"
"MA_42717g0010","No alias","Picea abies","(at4g11050 : 801.0) glycosyl hydrolase 9C3 (GH9C3); FUNCTIONS IN: carbohydrate binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Carbohydrate-binding (InterPro:IPR008965), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701), Carbohydrate binding domain CBM49 (InterPro:IPR019028); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9C2 (TAIR:AT1G64390.1); Has 1895 Blast hits to 1880 proteins in 271 species: Archae - 2; Bacteria - 695; Metazoa - 181; Fungi - 19; Plants - 923; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (q5nat0|gun2_orysa : 733.0) Endoglucanase 2 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 2) (OsGLU5) - Oryza sativa (Rice) & (reliability: 1602.0) &  (original description: no original description)","protein_coding"
"MA_44944g0010","No alias","Picea abies","(at5g02230 : 258.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), Pyrimidine 5-nucleotidase (InterPro:IPR010237), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G59480.1); Has 2249 Blast hits to 2246 proteins in 493 species: Archae - 16; Bacteria - 743; Metazoa - 0; Fungi - 143; Plants - 201; Viruses - 0; Other Eukaryotes - 1146 (source: NCBI BLink). & (reliability: 516.0) &  (original description: no original description)","protein_coding"
"MA_45158g0010","No alias","Picea abies","(at3g23740 : 100.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14120.1); Has 155 Blast hits to 130 proteins in 48 species: Archae - 0; Bacteria - 16; Metazoa - 19; Fungi - 48; Plants - 47; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 200.0) &  (original description: no original description)","protein_coding"
"MA_469572g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_488033g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_49755g0010","No alias","Picea abies","(at5g62550 : 102.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; Has 14949 Blast hits to 9947 proteins in 971 species: Archae - 43; Bacteria - 3248; Metazoa - 4424; Fungi - 1542; Plants - 562; Viruses - 55; Other Eukaryotes - 5075 (source: NCBI BLink). & (reliability: 204.0) &  (original description: no original description)","protein_coding"
"MA_53005g0010","No alias","Picea abies","(at2g46690 : 115.0) SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family  (TAIR:AT3G61900.1); Has 1291 Blast hits to 1280 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1290; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 230.0) &  (original description: no original description)","protein_coding"
"MA_54545g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_552873g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_56411g0010","No alias","Picea abies","(at5g65360 : 262.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: chloroplast, nucleosome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3 (InterPro:IPR000164), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G10400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p68428|h32_wheat : 261.0) Histone H3.2 - Triticum aestivum (Wheat) & (reliability: 524.0) &  (original description: no original description)","protein_coding"
"MA_581786g0010","No alias","Picea abies","(at4g16970 : 464.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G19110.1); Has 37123 Blast hits to 30477 proteins in 1124 species: Archae - 42; Bacteria - 1923; Metazoa - 14429; Fungi - 5359; Plants - 8078; Viruses - 40; Other Eukaryotes - 7252 (source: NCBI BLink). & (reliability: 928.0) &  (original description: no original description)","protein_coding"
"MA_614767g0010","No alias","Picea abies","(at4g13710 : 273.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: lyase activity, pectate lyase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectate lyase family protein (TAIR:AT3G24230.1). & (p40973|pel_lillo : 205.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (reliability: 546.0) &  (original description: no original description)","protein_coding"
"MA_6388939g0010","No alias","Picea abies","(at1g55850 : 271.0) encodes a protein similar to cellulose synthase; cellulose synthase like E1 (CSLE1); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: plant-type cell wall biogenesis, cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase like G2 (TAIR:AT4G24000.1); Has 2588 Blast hits to 1976 proteins in 305 species: Archae - 7; Bacteria - 382; Metazoa - 5; Fungi - 13; Plants - 2129; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (reliability: 542.0) &  (original description: no original description)","protein_coding"
"MA_6619g0010","No alias","Picea abies","(at1g44110 : 409.0) Cyclin A1;1 (CYCA1;1); CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin (InterPro:IPR006670), G2/mitotic-specific cyclin A (InterPro:IPR015453), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400); BEST Arabidopsis thaliana protein match is: CYCLIN A1;2 (TAIR:AT1G77390.1); Has 4548 Blast hits to 4417 proteins in 376 species: Archae - 0; Bacteria - 4; Metazoa - 1999; Fungi - 561; Plants - 1168; Viruses - 34; Other Eukaryotes - 782 (source: NCBI BLink). & (p25010|ccnal_dauca : 302.0) G2/mitotic-specific cyclin C13-1 (A-like cyclin) (Fragment) - Daucus carota (Carrot) & (reliability: 818.0) &  (original description: no original description)","protein_coding"
"MA_6634g0010","No alias","Picea abies","(o24308|top2_pea : 1595.0) DNA topoisomerase 2 (EC 5.99.1.3) (DNA topoisomerase II) (PsTopII) - Pisum sativum (Garden pea) & (at3g23890 : 1587.0) Encodes a topoisomerase II that is highly expressed in young seedlings. The protein is localized in the nucleus and gene expression levels are increased in proliferative tissues.; topoisomerase II (TOPII); CONTAINS InterPro DOMAIN/s: DNA topoisomerase, type IIA, subunit A/C-terminal (InterPro:IPR002205), DNA topoisomerase, type IIA, conserved site (InterPro:IPR018522), DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta (InterPro:IPR013758), DNA topoisomerase, type IIA, subunit B, domain 2 (InterPro:IPR013506), DNA topoisomerase, type IIA, subunit A, alpha-helical (InterPro:IPR013757), ATPase-like, ATP-binding domain (InterPro:IPR003594), DNA topoisomerase, type IIA, subunit B/N-terminal, alpha-beta (InterPro:IPR013759), DNA topoisomerase, type IIA, subunit B/N-terminal (InterPro:IPR001241), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), DNA topoisomerase II, eukaryotic-type (InterPro:IPR001154), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), DNA topoisomerase, type IIA, central (InterPro:IPR013760); BEST Arabidopsis thaliana protein match is: DNA GYRASE B2 (TAIR:AT5G04130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 3174.0) &  (original description: no original description)","protein_coding"
"MA_6646g0010","No alias","Picea abies","(at3g06130 : 109.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein  (TAIR:AT5G19090.3). & (reliability: 216.0) &  (original description: no original description)","protein_coding"
"MA_6800g0010","No alias","Picea abies","(at5g23400 : 340.0) Leucine-rich repeat (LRR) family protein; INVOLVED IN: signal transduction, defense response; LOCATED IN: cell wall; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT2G26380.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p93194|rpk1_iponi : 174.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 680.0) &  (original description: no original description)","protein_coding"
"MA_7129g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_72395g0010","No alias","Picea abies","(at2g16850 : 441.0) plasma membrane intrinsic protein 2;8 (PIP2;8); FUNCTIONS IN: water channel activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: root, flower, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 3 (TAIR:AT4G35100.2); Has 11009 Blast hits to 10999 proteins in 2241 species: Archae - 81; Bacteria - 5232; Metazoa - 1475; Fungi - 457; Plants - 2523; Viruses - 2; Other Eukaryotes - 1239 (source: NCBI BLink). & (q8h5n9|pip21_orysa : 432.0) Probable aquaporin PIP2.1 (Plasma membrane intrinsic protein 2a) (PIP2a) (OsPIP2.1) - Oryza sativa (Rice) & (reliability: 882.0) &  (original description: no original description)","protein_coding"
"MA_7353g0010","No alias","Picea abies","(at3g23770 : 281.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: leaf whorl, sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT4G14080.1); Has 2823 Blast hits to 2749 proteins in 147 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 32; Plants - 2780; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (p07979|gub_nicpl : 202.0) Lichenase precursor (EC 3.2.1.73) (Endo-beta-1,3-1,4 glucanase) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 562.0) &  (original description: no original description)","protein_coding"
"MA_78155g0010","No alias","Picea abies","(q7x6j9|exb17_orysa : 256.0) Expansin-B17 precursor (OsEXPB17) (Beta-expansin-17) (OsaEXPb1.13) - Oryza sativa (Rice) & (at2g20750 : 250.0) member of BETA-EXPANSINS. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin B1 (EXPB1); INVOLVED IN: plant-type cell wall organization, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin B3 (TAIR:AT4G28250.1); Has 2076 Blast hits to 2069 proteins in 143 species: Archae - 0; Bacteria - 15; Metazoa - 0; Fungi - 9; Plants - 2024; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (reliability: 500.0) &  (original description: no original description)","protein_coding"
"MA_8038g0010","No alias","Picea abies","(at5g24318 : 360.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT3G55430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p52409|e13b_wheat : 327.0) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Triticum aestivum (Wheat) & (reliability: 720.0) &  (original description: no original description)","protein_coding"
"MA_8291g0010","No alias","Picea abies","(at3g01015 : 210.0) TPX2 (targeting protein for Xklp2) protein family; CONTAINS InterPro DOMAIN/s: Xklp2 targeting protein (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: TPX2 (targeting protein for Xklp2) protein family (TAIR:AT5G15510.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 420.0) &  (original description: no original description)","protein_coding"
"MA_83822g0010","No alias","Picea abies","(at2g39220 : 427.0) PATATIN-like protein 6 (PLP6); FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: metabolic process, lipid metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: patatin-like protein 6 (TAIR:AT3G54950.1); Has 1294 Blast hits to 1292 proteins in 232 species: Archae - 0; Bacteria - 327; Metazoa - 139; Fungi - 43; Plants - 635; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (p15478|pat5_soltu : 155.0) Patatin T5 precursor (Potato tuber protein) - Solanum tuberosum (Potato) & (reliability: 854.0) &  (original description: no original description)","protein_coding"
"MA_83835g0010","No alias","Picea abies","(p24314|pcna_catro : 478.0) Proliferating cell nuclear antigen (PCNA) (Cyclin) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at1g07370 : 462.0) Encodes putative proliferating cell nuclear antigen involved in cell cycle regulation.; proliferating cellular nuclear antigen 1 (PCNA1); CONTAINS InterPro DOMAIN/s: Proliferating cell nuclear antigen, PCNA (InterPro:IPR000730), Proliferating cell nuclear antigen, PCNA, C-terminal (InterPro:IPR022649), Proliferating cell nuclear antigen, PCNA, conserved site (InterPro:IPR022659), Proliferating cell nuclear antigen, PCNA, N-terminal (InterPro:IPR022648); BEST Arabidopsis thaliana protein match is: proliferating cell nuclear antigen 2 (TAIR:AT2G29570.1); Has 1857 Blast hits to 1845 proteins in 456 species: Archae - 391; Bacteria - 0; Metazoa - 315; Fungi - 169; Plants - 159; Viruses - 71; Other Eukaryotes - 752 (source: NCBI BLink). & (reliability: 924.0) &  (original description: no original description)","protein_coding"
"MA_86562g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_86565g0010","No alias","Picea abies","(at5g23420 : 100.0) Encodes HMGB6, a protein belonging to the subgroup of HMGB (high mobility group B) proteins.  Localized in the nucleus. Binds to supercoiled DNA in vitro. HMGB6 is phosphorylated by protein kinase CK2alpha within its acidic C-terminal domain.; high-mobility group box 6 (HMGB6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages. & (reliability: 200.0) &  (original description: no original description)","protein_coding"
"MA_870g0010","No alias","Picea abies","(at5g02230 : 204.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), Pyrimidine 5-nucleotidase (InterPro:IPR010237), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G59480.1); Has 2249 Blast hits to 2246 proteins in 493 species: Archae - 16; Bacteria - 743; Metazoa - 0; Fungi - 143; Plants - 201; Viruses - 0; Other Eukaryotes - 1146 (source: NCBI BLink). & (reliability: 408.0) &  (original description: no original description)","protein_coding"
"MA_88843g0010","No alias","Picea abies","(at5g49160 : 1001.0) Encodes a cytosine methyltransferase MET1.  Required for silencing of FWA paternal allele in endosperm. Two lines with RNAi constructs directed against DMT1 have reduced agrobacterium-mediated tumor formation.; methyltransferase 1 (MET1); FUNCTIONS IN: methyltransferase activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA (cytosine-5)-methyltransferase 1 (InterPro:IPR017198), DNA methylase, C-5 cytosine-specific (InterPro:IPR001525), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), DNA methylase, C-5 cytosine-specific, active site (InterPro:IPR018117); BEST Arabidopsis thaliana protein match is: DNA (cytosine-5-)-methyltransferase family protein (TAIR:AT4G08990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q9axt8|cmt1_maize : 187.0) DNA (cytosine-5)-methyltransferase 1 (EC 2.1.1.37) (Chromomethylase 1) (Zea methyltransferase2) (Zmet2) (DNA cytosine methyltransferase MET2a) - Zea mays (Maize) & (reliability: 2002.0) &  (original description: no original description)","protein_coding"
"MA_88982g0010","No alias","Picea abies","(at5g11300 : 380.0) mitotic-like cyclin, core cell cycle gene that is expressed only in roots (RT_PCR), portions with mitotic activity only (whole mount in situ).; mitotic-like cyclin 3B from Arabidopsis (CYC3B); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin (InterPro:IPR006670), G2/mitotic-specific cyclin A (InterPro:IPR015453), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400); BEST Arabidopsis thaliana protein match is: cyclin a2;1 (TAIR:AT5G25380.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p25010|ccnal_dauca : 313.0) G2/mitotic-specific cyclin C13-1 (A-like cyclin) (Fragment) - Daucus carota (Carrot) & (reliability: 760.0) &  (original description: no original description)","protein_coding"
"MA_89971g0010","No alias","Picea abies","(at5g41460 : 133.0) Protein of unknown function (DUF604); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT4G23490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 266.0) &  (original description: no original description)","protein_coding"
"MA_90341g0010","No alias","Picea abies","(at2g16270 : 84.3) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16630.1); Has 1844 Blast hits to 1256 proteins in 271 species: Archae - 6; Bacteria - 283; Metazoa - 434; Fungi - 153; Plants - 91; Viruses - 52; Other Eukaryotes - 825 (source: NCBI BLink). & (reliability: 168.6) &  (original description: no original description)","protein_coding"
"MA_91393g0010","No alias","Picea abies","(at3g54650 : 400.0) FBL17; FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: generative cell mitosis, seed development, embryo development, ubiquitin-dependent protein catabolic process, pollen development; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810); Has 1738 Blast hits to 1195 proteins in 149 species: Archae - 0; Bacteria - 27; Metazoa - 733; Fungi - 89; Plants - 663; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink). & (reliability: 800.0) &  (original description: no original description)","protein_coding"
"MA_920994g0010","No alias","Picea abies","(at2g38620 : 451.0) Encodes a member of a plant specific family of cyclin dependent kinases.; cyclin-dependent kinase B1;2 (CDKB1;2); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cyclin-dependent kinase B1;1 (TAIR:AT3G54180.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q38774|cdc2c_antma : 447.0) Cell division control protein 2 homolog C (EC 2.7.11.22) (EC 2.7.11.23) - Antirrhinum majus (Garden snapdragon) & (reliability: 902.0) &  (original description: no original description)","protein_coding"
"MA_9263807g0010","No alias","Picea abies","(at1g20150 : 84.7) Subtilisin-like serine endopeptidase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: leaf whorl, sepal, root, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259), Peptidase S8, subtilisin-related (InterPro:IPR015500); BEST Arabidopsis thaliana protein match is: Subtilisin-like serine endopeptidase family protein (TAIR:AT1G20160.1); Has 5897 Blast hits to 5420 proteins in 979 species: Archae - 165; Bacteria - 3134; Metazoa - 93; Fungi - 262; Plants - 1911; Viruses - 0; Other Eukaryotes - 332 (source: NCBI BLink). & (reliability: 169.4) &  (original description: no original description)","protein_coding"
"MA_93486g0010","No alias","Picea abies","(at5g19780 : 800.0) Encodes an isoform of alpha tubulin. Closely related to adjacent gene TUA3 suggesting recent duplication.; tubulin alpha-5 (TUA5); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: response to cadmium ion, microtubule-based process; LOCATED IN: tubulin complex, cytosol, cell wall, membrane; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Alpha tubulin (InterPro:IPR002452), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Beta tubulin, autoregulation binding site (InterPro:IPR013838), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: tubulin alpha-3 (TAIR:AT5G19770.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p33627|tba6_maize : 799.0) Tubulin alpha-6 chain (Alpha-6 tubulin) - Zea mays (Maize) & (reliability: 1600.0) &  (original description: no original description)","protein_coding"
"MA_9554g0010","No alias","Picea abies","(at1g50240 : 615.0) The FUSED (FU) gene belongs to Ser/Thr protein kinase family and has a key role in the hedgehog signaling pathway known to control cell proliferation and patterning in fruit flies and humans . Arabidopsis thaliana genome has a single Fu gene. Cytokinesis-defective mutants, which we named two-in-one (tio), result from mutations in Arabidopsis Fu. Phenotypic analysis of tio mutants reveals an essential role for TIO in conventional modes of cytokinesis in plant meristems and during male gametogenesis. TIO is tightly localized to the midline of the nascent phragmoplast and remains associated with the expanding phragmoplast ring. This gene was previously annotated as two gene models, AT1G50230.1 and AT1G50240.1, however the experimental evidence exists (Oh et al, Current Biology, 2005) showing that these two models are in fact single gene, named FUSED.; FUSED (FU); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), 26S proteasome non-ATPase regulatory subunit 5 (InterPro:IPR019538), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: serine/threonine protein kinase 2 (TAIR:AT3G08720.2); Has 138334 Blast hits to 135590 proteins in 4834 species: Archae - 164; Bacteria - 15793; Metazoa - 51363; Fungi - 13983; Plants - 33508; Viruses - 544; Other Eukaryotes - 22979 (source: NCBI BLink). & (reliability: 1230.0) &  (original description: no original description)","protein_coding"
"MA_962778g0010","No alias","Picea abies","(q2hu68|h2a1_medtr : 184.0) Probable histone H2A.1 - Medicago truncatula (Barrel medic) & (at5g02560 : 176.0) Encodes HTA12, a histone H2A protein.; histone H2A 12 (HTA12); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2A (InterPro:IPR002119), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: histone H2A 6 (TAIR:AT5G59870.1). & (reliability: 352.0) &  (original description: no original description)","protein_coding"
"MA_96657g0010","No alias","Picea abies","(at5g57550 : 317.0) xyloglucan endotransglycosylase-related protein (XTR3); xyloglucan endotransglucosylase/hydrolase 25 (XTH25); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: plant-type cell wall biogenesis; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglycosylase 6 (TAIR:AT4G25810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p35694|bru1_soybn : 313.0) Brassinosteroid-regulated protein BRU1 precursor - Glycine max (Soybean) & (reliability: 634.0) &  (original description: no original description)","protein_coding"
"MA_9738483g0010","No alias","Picea abies","(p49199|rs8_orysa : 198.0) 40S ribosomal protein S8 - Oryza sativa (Rice) & (at5g59240 : 192.0) Ribosomal protein S8e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein S8e (InterPro:IPR001047), Ribosomal protein S8e, conserved site (InterPro:IPR018283), Ribosomal protein S8e/ribosomal biogenesis NSA2= (InterPro:IPR022309); BEST Arabidopsis thaliana protein match is: Ribosomal protein S8e family protein (TAIR:AT5G20290.1); Has 1068 Blast hits to 1064 proteins in 429 species: Archae - 247; Bacteria - 0; Metazoa - 364; Fungi - 161; Plants - 120; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (reliability: 384.0) &  (original description: no original description)","protein_coding"
"MA_97947g0010","No alias","Picea abies","(at1g67750 : 510.0) Pectate lyase family protein; FUNCTIONS IN: pectate lyase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G63180.1); Has 1739 Blast hits to 1731 proteins in 272 species: Archae - 0; Bacteria - 767; Metazoa - 0; Fungi - 258; Plants - 701; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (p40973|pel_lillo : 356.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (reliability: 1020.0) &  (original description: no original description)","protein_coding"
"Mp1g00070.1","No alias","Marchantia polymorpha","component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage response heterodimer","protein_coding"
"Mp1g00710.1","No alias","Marchantia polymorpha","DNA repair protein (CEN2). centrin component CEN of TREX-2 mRNP trafficking complex","protein_coding"
"Mp1g04300.1","No alias","Marchantia polymorpha","manganese superoxide dismutase","protein_coding"
"Mp1g14780.1","No alias","Marchantia polymorpha","component EXO70 of Exocyst complex","protein_coding"
"Mp1g15280.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g15350.1","No alias","Marchantia polymorpha","ethanolamine kinase","protein_coding"
"Mp1g24520.1","No alias","Marchantia polymorpha","component SNAPC4 of SNAP snRNA transcription factor complex. transcription factor (MYB)","protein_coding"
"Mp1g25640.1","No alias","Marchantia polymorpha","tetra-acyl-disaccharide kinase (LpxK)","protein_coding"
"Mp1g25710.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g26920.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp2g00370.1","No alias","Marchantia polymorpha","snoRNP scaffold component Nop58 of snoRNP rRNA methylation complex","protein_coding"
"Mp2g02690.1","No alias","Marchantia polymorpha","sliding clamp protein (PCNA)","protein_coding"
"Mp2g06960.1","No alias","Marchantia polymorpha","RING-H2-class E3 ligase","protein_coding"
"Mp2g08900.1","No alias","Marchantia polymorpha","component BLOS2 of BLOC-1 endosome-to-vacuole sorting complex","protein_coding"
"Mp2g14660.1","No alias","Marchantia polymorpha","component NDC80 of NDC80 outer kinetochore complex","protein_coding"
"Mp2g15200.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp2g16880.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp2g17040.1","No alias","Marchantia polymorpha","Probable ribose-5-phosphate isomerase 3, chloroplastic OS=Arabidopsis thaliana (sp|q9s726|rpi3_arath : 164.0) & Enzyme classification.EC_5 isomerases.EC_5.3 intramolecular oxidoreductase(50.5.3 : 141.9)","protein_coding"
"Mp2g19920.1","No alias","Marchantia polymorpha","Ran GTPase","protein_coding"
"Mp2g19970.1","No alias","Marchantia polymorpha","transcription factor (bHLH)","protein_coding"
"Mp2g21800.1","No alias","Marchantia polymorpha","subfamily ABCG transporter","protein_coding"
"Mp2g23500.1","No alias","Marchantia polymorpha","component alpha-Tubulin of alpha-beta-Tubulin heterodimer","protein_coding"
"Mp3g00870.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp3g01400.1","No alias","Marchantia polymorpha","microtubule plus-end-tracking protein (EB1). MT plus-end-tracking protein (EB1)","protein_coding"
"Mp3g03360.2","No alias","Marchantia polymorpha","proton:urea symporter (DUR)","protein_coding"
"Mp3g07880.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp3g11850.1","No alias","Marchantia polymorpha","Uncharacterized protein At5g49945 OS=Arabidopsis thaliana (sp|q94cc0|y5994_arath : 353.0)","protein_coding"
"Mp3g13470.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp3g13480.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp3g13570.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp3g19300.1","No alias","Marchantia polymorpha","50S ribosomal protein HLP, mitochondrial OS=Arabidopsis thaliana (sp|q93z17|hlp_arath : 126.0)","protein_coding"
"Mp3g22870.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp3g22920.1","No alias","Marchantia polymorpha","component RAD51 of BRCC DNA-damage response complex","protein_coding"
"Mp3g23550.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp3g24240.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp3g24800.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp4g00050.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp4g00610.1","No alias","Marchantia polymorpha","isopentenyl diphosphate isomerase","protein_coding"
"Mp4g09260.1","No alias","Marchantia polymorpha","Met-tRNA positioning component eIF5B of initiator tRNA carrier complex","protein_coding"
"Mp4g10380.1","No alias","Marchantia polymorpha","Protein FIP1 OS=Arabidopsis thaliana (sp|q8s8k9|frip1_arath : 248.0)","protein_coding"
"Mp4g10660.1","No alias","Marchantia polymorpha","iron chelator transporter (YSL). ferric cation-chelator transporter (YSL)","protein_coding"
"Mp4g13360.1","No alias","Marchantia polymorpha","component NF-YB of NF-Y transcription factor complex","protein_coding"
"Mp4g15400.1","No alias","Marchantia polymorpha","component KAE1 of tRNA N6-threonylcarbamoylation KEOPS/EKC complex","protein_coding"
"Mp4g15980.1","No alias","Marchantia polymorpha","RNA chaperone (RZ1|GR-RBP)","protein_coding"
"Mp4g16430.1","No alias","Marchantia polymorpha","P-loop NTPase domain-containing protein LPA1 OS=Oryza sativa subsp. japonica (sp|b9f4i8|lpa1_orysj : 592.0)","protein_coding"
"Mp4g19900.1","No alias","Marchantia polymorpha","phosphate transporter (PHT2)","protein_coding"
"Mp4g20100.1","No alias","Marchantia polymorpha","E-class RAB GTPase","protein_coding"
"Mp4g20180.1","No alias","Marchantia polymorpha","DEAD-box ATP-dependent RNA helicase 10 OS=Arabidopsis thaliana (sp|q8gy84|rh10_arath : 541.0)","protein_coding"
"Mp4g20580.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp5g00090.1","No alias","Marchantia polymorpha","biosynthetic protein (Thi4)","protein_coding"
"Mp5g08780.1","No alias","Marchantia polymorpha","sliding clamp protein (PCNA)","protein_coding"
"Mp5g18580.1","No alias","Marchantia polymorpha","Cytosolic endo-beta-N-acetylglucosaminidase 1 OS=Arabidopsis thaliana (sp|f4jzc2|enas1_arath : 471.0)","protein_coding"
"Mp5g19610.1","No alias","Marchantia polymorpha","Probable aldo-keto reductase 2 OS=Oryza sativa subsp. japonica (sp|q7xt99|akr2_orysj : 437.0) & Enzyme classification.EC_1 oxidoreductases.EC_1.1 oxidoreductase acting on CH-OH group of donor(50.1.1 : 405.9)","protein_coding"
"Mp5g20400.1","No alias","Marchantia polymorpha","protein kinase (LRR-VIII-1)","protein_coding"
"Mp5g20460.1","No alias","Marchantia polymorpha","Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana (sp|q9sf32|iqd1_arath : 86.7)","protein_coding"
"Mp5g24280.1","No alias","Marchantia polymorpha","protein disulfide isomerase (PDI8)","protein_coding"
"Mp6g00440.1","No alias","Marchantia polymorpha","no description available(sp|q60ew9|ftip7_orysj : 926.0)","protein_coding"
"Mp6g07050.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp6g08890.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp6g10260.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp6g13590.1","No alias","Marchantia polymorpha","Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1 OS=Arabidopsis thaliana (sp|q94k49|alp1_arath : 94.7)","protein_coding"
"Mp6g18210.1","No alias","Marchantia polymorpha","catalytic component SEC11 of SPC endoplasmic signal peptidase complex","protein_coding"
"Mp6g20820.1","No alias","Marchantia polymorpha","Translocon-associated protein subunit alpha OS=Arabidopsis thaliana (sp|p45434|ssra_arath : 179.0)","protein_coding"
"Mp7g03530.1","No alias","Marchantia polymorpha","pre-mRNA-processing protein (LUC7)","protein_coding"
"Mp7g04190.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp7g09200.1","No alias","Marchantia polymorpha","Xyloglucan galactosyltransferase KATAMARI1 homolog OS=Oryza sativa subsp. japonica (sp|q8h038|katam_orysj : 508.0)","protein_coding"
"Mp7g12890.1","No alias","Marchantia polymorpha","DEAD-box ATP-dependent RNA helicase 27 OS=Oryza sativa subsp. japonica (sp|q84t03|rh27_orysj : 647.0)","protein_coding"
"Mp7g14700.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp7g17170.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp8g00610.1","No alias","Marchantia polymorpha","PLP3 CCT-interacting tubulin folding cofactor","protein_coding"
"Mp8g00870.1","No alias","Marchantia polymorpha","component ORC6 of origin recognition complex","protein_coding"
"Mp8g02920.1","No alias","Marchantia polymorpha","sulfate transporter (SULTR)","protein_coding"
"Mp8g02930.1","No alias","Marchantia polymorpha","sulfate transporter (SULTR)","protein_coding"
"Mp8g06730.1","No alias","Marchantia polymorpha","P2A-type calcium cation-transporting ATPase (ECA)","protein_coding"
"Mp8g09760.1","No alias","Marchantia polymorpha","O-acetylserine sulfydrylase","protein_coding"
"Mp8g11450.1","No alias","Marchantia polymorpha","transcription factor (AP2)","protein_coding"
"Mp8g11870.1","No alias","Marchantia polymorpha","transcription factor (MYB)","protein_coding"
"Mp8g14130.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp8g15200.1","No alias","Marchantia polymorpha","TNPO3 nucleocytoplasmic transport karyopherin","protein_coding"
"Mp8g16920.1","No alias","Marchantia polymorpha","component mtRPL13 of large ribosomal subunit proteome","protein_coding"
"Potri.001G247700","No alias","Populus trichocarpa","proliferating cell nuclear antigen 2","protein_coding"
"Potri.009G040900","No alias","Populus trichocarpa","proliferating cell nuclear antigen 2","protein_coding"
"Potri.010G097400","No alias","Populus trichocarpa","zinc knuckle (CCHC-type) family protein","protein_coding"
"Pp1s100_145V6","No alias","Physcomitrella patens","fructose- -","protein_coding"
"Pp1s101_102V6","No alias","Physcomitrella patens","F3L24.8; KOW domain-containing transcription factor family protein [Arabidopsis thaliana]","protein_coding"
"Pp1s10_51V6","No alias","Physcomitrella patens","glycosyltransferase 8 domain containing 2","protein_coding"
"Pp1s115_206V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s117_71V6","No alias","Physcomitrella patens","dna methyltransferase","protein_coding"
"Pp1s126_149V6","No alias","Physcomitrella patens","transient receptor potential cation subfamily member 4 associated protein","protein_coding"
"Pp1s12_289V6","No alias","Physcomitrella patens","pyruvate kinase","protein_coding"
"Pp1s12_401V6","No alias","Physcomitrella patens","dehydroascorbate reductase","protein_coding"
"Pp1s137_140V6","No alias","Physcomitrella patens","5-enolpyruvylshikimate-3-phosphate synthase","protein_coding"
"Pp1s138_49V6","No alias","Physcomitrella patens","endoplasmic reticulum metallopeptidase 1","protein_coding"
"Pp1s140_111V6","No alias","Physcomitrella patens","omega-3 fatty acid desaturase","protein_coding"
"Pp1s141_83V6","No alias","Physcomitrella patens","branched-chain-amino-acid aminotransferase","protein_coding"
"Pp1s143_112V6","No alias","Physcomitrella patens","galactose oxidase","protein_coding"
"Pp1s145_28V6","No alias","Physcomitrella patens","component of oligomeric golgi complex 5","protein_coding"
"Pp1s146_76V6","No alias","Physcomitrella patens","kinesin family member 21a","protein_coding"
"Pp1s149_20V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s154_101V6","No alias","Physcomitrella patens","Hypothetical 81.2 kDa protein in NMD5-HOM6 intergenic region [Saccharomyces cerevisiae]","protein_coding"
"Pp1s156_133V6","No alias","Physcomitrella patens","T12J5.3; protein kinase family protein [Arabidopsis thaliana]","protein_coding"
"Pp1s159_2V6","No alias","Physcomitrella patens","MTG13.14; proline-rich protein family [Arabidopsis thaliana]","protein_coding"
"Pp1s15_234V6","No alias","Physcomitrella patens","ap2 erf domain-containing transcription factor","protein_coding"
"Pp1s15_290V6","No alias","Physcomitrella patens","loc398434 protein","protein_coding"
"Pp1s15_448V6","No alias","Physcomitrella patens","MZB10.7; pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana]","protein_coding"
"Pp1s163_112V6","No alias","Physcomitrella patens","transcription factor WRKY9","protein_coding"
"Pp1s167_88V6","No alias","Physcomitrella patens","nitrilase 1","protein_coding"
"Pp1s169_16V6","No alias","Physcomitrella patens","btb poz domain containing protein","protein_coding"
"Pp1s175_128V6","No alias","Physcomitrella patens","phosphoribosylamine--glycine ligase","protein_coding"
"Pp1s175_135V6","No alias","Physcomitrella patens","F23F1.3; transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana]","protein_coding"
"Pp1s176_95V6","No alias","Physcomitrella patens","ugpi6_arath uncharacterized gpi-anchored protein at1g61900 precursor","protein_coding"
"Pp1s178_11V6","No alias","Physcomitrella patens","salt tolerance expressed","protein_coding"
"Pp1s184_7V6","No alias","Physcomitrella patens","metalloendoproteinase 1","protein_coding"
"Pp1s189_77V6","No alias","Physcomitrella patens","MYF24.19; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s191_85V6","No alias","Physcomitrella patens","MNL12.14; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s194_101V6","No alias","Physcomitrella patens","1-like protein","protein_coding"
"Pp1s1_40V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s211_116V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s215_24V6","No alias","Physcomitrella patens","-bisphosphoglycerate-independent phosphoglycerate mutase","protein_coding"
"Pp1s215_91V6","No alias","Physcomitrella patens","Ribonucleoside-diphosphate reductase small chain (Ribonucleotide reductase small subunit) (Ribonucleoside-diphosphate reductase R2 subunit) [Nicotiana tabacum]","protein_coding"
"Pp1s227_112V6","No alias","Physcomitrella patens","proliferating cell nuclear antigen","protein_coding"
"Pp1s235_87V6","No alias","Physcomitrella patens","aspartyl-trna synthetase","protein_coding"
"Pp1s237_14V6","No alias","Physcomitrella patens","gdp-mannose 3 -epimerase","protein_coding"
"Pp1s241_28V6","No alias","Physcomitrella patens","F2A19.140; peptidase family protein [Arabidopsis thaliana]","protein_coding"
"Pp1s242_44V6","No alias","Physcomitrella patens","F3F19.5; sphere organelles protein-related [Arabidopsis thaliana]","protein_coding"
"Pp1s24_68V6","No alias","Physcomitrella patens","hypothetical protein [Dictyostelium discoideum]","protein_coding"
"Pp1s257_28V6","No alias","Physcomitrella patens","T3G21.15; prenylated rab acceptor (PRA1) family protein [Arabidopsis thaliana]","protein_coding"
"Pp1s258_49V6","No alias","Physcomitrella patens","serine threonine-protein kinase 16","protein_coding"
"Pp1s258_78V6","No alias","Physcomitrella patens","set domain-containing protein","protein_coding"
"Pp1s259_112V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s27_234V6","No alias","Physcomitrella patens","fructokinase 2","protein_coding"
"Pp1s290_6V6","No alias","Physcomitrella patens","F13K23.16; flower pigmentation protein (AN11) [Arabidopsis thaliana]","protein_coding"
"Pp1s298_70V6","No alias","Physcomitrella patens","F26K9.30; DNAJ heat shock family protein [Arabidopsis thaliana]","protein_coding"
"Pp1s29_108V6","No alias","Physcomitrella patens","multidrug pheromone mdr abc transporter family","protein_coding"
"Pp1s2_239V6","No alias","Physcomitrella patens","nitrogen regulation family protein","protein_coding"
"Pp1s2_610V6","No alias","Physcomitrella patens","cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase","protein_coding"
"Pp1s304_37V6","No alias","Physcomitrella patens","glutamine-fructose-6-phosphate transaminase 2","protein_coding"
"Pp1s30_345V6","No alias","Physcomitrella patens","2-cys peroxiredoxin-like protein","protein_coding"
"Pp1s31_147V6","No alias","Physcomitrella patens","dna binding","protein_coding"
"Pp1s31_249V6","No alias","Physcomitrella patens","serine threonine kinase","protein_coding"
"Pp1s322_44V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s324_49V6","No alias","Physcomitrella patens","tetrahydrofolate dehydrogenase cyclohydrolase","protein_coding"
"Pp1s328_44V6","No alias","Physcomitrella patens","profilin","protein_coding"
"Pp1s349_1V6","No alias","Physcomitrella patens","speckle-type poz","protein_coding"
"Pp1s35_94V6","No alias","Physcomitrella patens","dihydrolipoyl dehydrogenase","protein_coding"
"Pp1s371_31V6","No alias","Physcomitrella patens","ribosomal protein","protein_coding"
"Pp1s392_18V6","No alias","Physcomitrella patens","pyruvate kinase","protein_coding"
"Pp1s407_48V6","No alias","Physcomitrella patens","protein disulfide-isomerase-like protein","protein_coding"
"Pp1s411_26V6","No alias","Physcomitrella patens","per5_vitvi ame: full=peroxidase 5","protein_coding"
"Pp1s434_10V6","No alias","Physcomitrella patens","MUD21.7; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s43_32V6","No alias","Physcomitrella patens","carbamoyl-phosphate large glutamine-dependent","protein_coding"
"Pp1s44_238V6","No alias","Physcomitrella patens","4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis","protein_coding"
"Pp1s46_194V6","No alias","Physcomitrella patens","proliferating cell nuclear antigen","protein_coding"
"Pp1s47_120V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s47_18V6","No alias","Physcomitrella patens","dehydroquinate dehydratase shikimate dehydrogenase","protein_coding"
"Pp1s47_263V6","No alias","Physcomitrella patens","GA469.2; HAL2-related protein (Ahl) [Arabidopsis thaliana]","protein_coding"
"Pp1s48_204V6","No alias","Physcomitrella patens","F4P13.33; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s495_5V6","No alias","Physcomitrella patens","rdr6 gene for RNA-dependent RNA polymerase protein RDR6","protein_coding"
"Pp1s495_7V6","No alias","Physcomitrella patens","suf4 (suppressor of frigida4) dna binding protein heterodimerization protein homodimerization transcription factor","protein_coding"
"Pp1s519_8V6","No alias","Physcomitrella patens","F3C22.10; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s51_54V6","No alias","Physcomitrella patens","glutamine cyclotransferase","protein_coding"
"Pp1s526_2V6","No alias","Physcomitrella patens","heat shock protein 70","protein_coding"
"Pp1s535_3V6","No alias","Physcomitrella patens","methylenetetrahydrofolate reductase","protein_coding"
"Pp1s53_223V6","No alias","Physcomitrella patens","cazy family gt8","protein_coding"
"Pp1s53_33V6","No alias","Physcomitrella patens","proteasome subunit beta type 7-a precursor","protein_coding"
"Pp1s54_67V6","No alias","Physcomitrella patens","L73G19.10; fibrillarin 2 (FIB2) [Arabidopsis thaliana]","protein_coding"
"Pp1s54_77V6","No alias","Physcomitrella patens","biotin carboxyl carrier protein subunit of of het-accase","protein_coding"
"Pp1s55_121V6","No alias","Physcomitrella patens","peroxidase","protein_coding"
"Pp1s59_343V6","No alias","Physcomitrella patens","cation antiporter","protein_coding"
"Pp1s60_200V6","No alias","Physcomitrella patens","vacuolar proton","protein_coding"
"Pp1s60_238V6","No alias","Physcomitrella patens","hypothetical protein SORBIDRAFT_03g037990 [Sorghum bicolor]","protein_coding"
"Pp1s66_154V6","No alias","Physcomitrella patens","alpha- -glucan-protein synthase","protein_coding"
"Pp1s66_190V6","No alias","Physcomitrella patens","methionyl-trna synthetase","protein_coding"
"Pp1s6_242V6","No alias","Physcomitrella patens","T4K22.6; auxin-responsive factor (ARF6) [Arabidopsis thaliana]","protein_coding"
"Pp1s70_210V6","No alias","Physcomitrella patens","alpha tubulin 1","protein_coding"
"Pp1s70_39V6","No alias","Physcomitrella patens","transparent testa 12","protein_coding"
"Pp1s75_108V6","No alias","Physcomitrella patens","vacuolar protein sorting 29","protein_coding"
"Pp1s77_324V6","No alias","Physcomitrella patens","dihydrodipicolinate synthase","protein_coding"
"Pp1s77_54V6","No alias","Physcomitrella patens","protein disulfide","protein_coding"
"Pp1s79_107V6","No alias","Physcomitrella patens","integral membrane family expressed","protein_coding"
"Pp1s79_171V6","No alias","Physcomitrella patens","26s protease regulatory subunit 6b","protein_coding"
"Pp1s7_13V6","No alias","Physcomitrella patens","wrky transcription","protein_coding"
"Pp1s80_24V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s87_109V6","No alias","Physcomitrella patens","small nuclear ribonucleoprotein u1a","protein_coding"
"Pp1s8_156V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s90_243V6","No alias","Physcomitrella patens","T1N6.18; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s91_19V6","No alias","Physcomitrella patens","hypothetical protein [Vitis vinifera]","protein_coding"
"Pp1s94_114V6","No alias","Physcomitrella patens","T5K6.20; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s98_20V6","No alias","Physcomitrella patens","origin recognition subunit 5-like","protein_coding"
"PSME_00000106-RA","No alias","Pseudotsuga menziesii","(at3g13220 : 667.0) Encodes a ATP-binding cassette transporter G26 (ABCG26) involved in tapetal cell and pollen development. Required for male fertility and pollen exine formation.; WBC27; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G52310.1); Has 402808 Blast hits to 366123 proteins in 4145 species: Archae - 7203; Bacteria - 319822; Metazoa - 8717; Fungi - 6492; Plants - 5411; Viruses - 13; Other Eukaryotes - 55150 (source: NCBI BLink). & (q8s628|pdr13_orysa : 179.0) Pleiotropic drug resistance protein 13 - Oryza sativa (Rice) & (reliability: 1334.0) &  (original description: no original description)","protein_coding"
"PSME_00000415-RA","No alias","Pseudotsuga menziesii","(at1g60420 : 322.0) Reduce transmission through pollen.; DC1 domain-containing protein; FUNCTIONS IN: oxidoreductase activity, antioxidant activity; INVOLVED IN: response to cadmium ion, pollen tube growth, pollen tube guidance; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), C1-like (InterPro:IPR011424), Thioredoxin, conserved site (InterPro:IPR017937); BEST Arabidopsis thaliana protein match is: protein kinase C-like zinc finger protein (TAIR:AT4G31240.2); Has 6688 Blast hits to 3903 proteins in 794 species: Archae - 4; Bacteria - 4185; Metazoa - 634; Fungi - 4; Plants - 553; Viruses - 0; Other Eukaryotes - 1308 (source: NCBI BLink). & (reliability: 644.0) &  (original description: no original description)","protein_coding"
"PSME_00000731-RA","No alias","Pseudotsuga menziesii","(at3g45620 : 391.0) This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase; Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: protein binding, nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G35140.1). & (reliability: 782.0) &  (original description: no original description)","protein_coding"
"PSME_00000765-RA","No alias","Pseudotsuga menziesii","(at1g19270 : 206.0) DA1 (DA1); CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781), Ubiquitin interacting motif (InterPro:IPR003903), Protein of unknown function DUF3633 (InterPro:IPR022087); BEST Arabidopsis thaliana protein match is: LIM domain-containing protein (TAIR:AT4G36860.1); Has 3538 Blast hits to 2617 proteins in 167 species: Archae - 0; Bacteria - 18; Metazoa - 3009; Fungi - 63; Plants - 177; Viruses - 0; Other Eukaryotes - 271 (source: NCBI BLink). & (reliability: 412.0) &  (original description: no original description)","protein_coding"
"PSME_00000986-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00001273-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00001380-RA","No alias","Pseudotsuga menziesii","(at5g53950 : 248.0) Transcriptional activator of the NAC gene family, with CUC1 redundantly required for embryonic apical meristem formation, cotyledon separation and expression of STM.  Proper timing of CUC2 expression is required to maintain the phyllotactic pattern initiated in the meristem. CUC2 expression in leaf sinus region is required for serration and the extent of serration is modulated by mir164A mediated repression of CUC2.; CUP-SHAPED COTYLEDON 2 (CUC2); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT3G15170.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q5cd17|nac77_orysa : 201.0) NAC domain-containing protein 77 (ONAC077) (ONAC300) - Oryza sativa (Rice) & (reliability: 480.0) &  (original description: no original description)","protein_coding"
"PSME_00001448-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00001735-RA","No alias","Pseudotsuga menziesii","(at4g18910 : 274.0) Encodes an aquaporin homolog. Functions in arsenite transport and tolerance.When expressed in yeast cells can conduct hydrogen peroxide into those cells.; NOD26-like intrinsic protein 1;2 (NIP1;2); FUNCTIONS IN: water channel activity, arsenite transmembrane transporter activity; INVOLVED IN: transport, hydrogen peroxide transmembrane transport, response to arsenic, arsenite transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: NOD26-like major intrinsic protein 1 (TAIR:AT4G19030.1); Has 10753 Blast hits to 10647 proteins in 2223 species: Archae - 110; Bacteria - 5339; Metazoa - 1367; Fungi - 450; Plants - 2101; Viruses - 4; Other Eukaryotes - 1382 (source: NCBI BLink). & (p08995|no26_soybn : 262.0) Nodulin-26 (N-26) - Glycine max (Soybean) & (reliability: 548.0) &  (original description: no original description)","protein_coding"
"PSME_00001997-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00002541-RA","No alias","Pseudotsuga menziesii","(at3g19700 : 306.0) Encodes leucine rich repeat (LRR) kinase.  Iku2-3 identified in a screen for mutants with abnormal endosperm. Sporophytic recessive mutants have reduced embryo and endosperm size. Seed size is also reduced and the shape is abnormal suggesting an interaction between the endosperm and cell elongation in the integuments.; HAIKU2 (IKU2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, endosperm development; LOCATED IN: endomembrane system; EXPRESSED IN: fruit; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT1G09970.1); Has 212277 Blast hits to 140483 proteins in 4652 species: Archae - 172; Bacteria - 21845; Metazoa - 68496; Fungi - 11129; Plants - 84909; Viruses - 459; Other Eukaryotes - 25267 (source: NCBI BLink). & (p93194|rpk1_iponi : 197.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 612.0) &  (original description: no original description)","protein_coding"
"PSME_00002626-RA","No alias","Pseudotsuga menziesii","(at3g02820 : 162.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: cell cycle, replication fork protection, response to DNA damage stimulus; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Replication fork protection component Swi3 (InterPro:IPR012923), Zinc finger, CCHC-type (InterPro:IPR001878); Has 415 Blast hits to 415 proteins in 134 species: Archae - 0; Bacteria - 4; Metazoa - 156; Fungi - 94; Plants - 93; Viruses - 28; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 324.0) &  (original description: no original description)","protein_coding"
"PSME_00002715-RA","No alias","Pseudotsuga menziesii","(at1g80300 : 127.0) nucleotide transporter 1 (NTT1); FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: membrane, chloroplast envelope; EXPRESSED IN: stem, root, guard cell, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: TLC ATP/ADP transporter (TAIR:AT1G15500.1); Has 784 Blast hits to 777 proteins in 180 species: Archae - 0; Bacteria - 480; Metazoa - 8; Fungi - 28; Plants - 103; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (o24381|tlc1_soltu : 126.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 250.0) &  (original description: no original description)","protein_coding"
"PSME_00002780-RA","No alias","Pseudotsuga menziesii","(at4g10500 : 283.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: secondary metabolic process; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G10490.1); Has 8560 Blast hits to 8509 proteins in 1005 species: Archae - 0; Bacteria - 1116; Metazoa - 115; Fungi - 958; Plants - 4983; Viruses - 0; Other Eukaryotes - 1388 (source: NCBI BLink). & (p28038|fl3h_horvu : 169.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Hordeum vulgare (Barley) & (reliability: 558.0) &  (original description: no original description)","protein_coding"
"PSME_00002813-RA","No alias","Pseudotsuga menziesii","(at1g21240 : 140.0) encodes a wall-associated kinase; wall associated kinase 3 (WAK3); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: EGF-like calcium-binding (InterPro:IPR001881), EGF-like, type 3 (InterPro:IPR000742), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), EGF-type aspartate/asparagine hydroxylation site (InterPro:IPR000152), Protein kinase, catalytic domain (InterPro:IPR000719), EGF-like calcium-binding, conserved site (InterPro:IPR018097), EGF calcium-binding (InterPro:IPR013091), EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana protein match is: cell wall-associated kinase (TAIR:AT1G21250.1); Has 137245 Blast hits to 122966 proteins in 4824 species: Archae - 125; Bacteria - 13959; Metazoa - 61902; Fungi - 9553; Plants - 33418; Viruses - 443; Other Eukaryotes - 17845 (source: NCBI BLink). & (q8l4h4|nork_medtr : 117.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 270.0) &  (original description: no original description)","protein_coding"
"PSME_00002852-RA","No alias","Pseudotsuga menziesii","(at4g23160 : 135.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Reverse transcriptase, RNA-dependent DNA polymerase (InterPro:IPR013103), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 (TAIR:AT4G23140.1); Has 131284 Blast hits to 128961 proteins in 4748 species: Archae - 114; Bacteria - 13787; Metazoa - 45525; Fungi - 11866; Plants - 40839; Viruses - 427; Other Eukaryotes - 18726 (source: NCBI BLink). & (p93194|rpk1_iponi : 87.4) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 246.0) &  (original description: no original description)","protein_coding"
"PSME_00002975-RA","No alias","Pseudotsuga menziesii","(q5kqn0|cax2_orysa : 504.0) Vacuolar cation/proton exchanger 2 (Ca(2+)/H(+) exchanger 2) (OsCAX2) - Oryza sativa (Rice) & (at1g55730 : 493.0) member of Low affinity calcium antiporter CAX2 family; cation exchanger 5 (CAX5); FUNCTIONS IN: cation:cation antiporter activity, calcium:cation antiporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: Sodium/calcium exchanger membrane region (InterPro:IPR004837), Calcium/proton exchanger superfamily (InterPro:IPR004798), Calcium/proton exchanger (InterPro:IPR004713); BEST Arabidopsis thaliana protein match is: cation exchanger 2 (TAIR:AT3G13320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 986.0) &  (original description: no original description)","protein_coding"
"PSME_00003396-RA","No alias","Pseudotsuga menziesii","(at4g16260 : 263.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: defense response to fungus, incompatible interaction, response to salt stress; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-1,3-glucanase 1 (TAIR:AT3G57270.1); Has 2169 Blast hits to 2154 proteins in 141 species: Archae - 0; Bacteria - 6; Metazoa - 5; Fungi - 22; Plants - 2121; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (p07979|gub_nicpl : 244.0) Lichenase precursor (EC 3.2.1.73) (Endo-beta-1,3-1,4 glucanase) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 526.0) &  (original description: no original description)","protein_coding"
"PSME_00003909-RA","No alias","Pseudotsuga menziesii","(at1g75660 : 172.0) Encodes a protein with similarity to yeast 5'-3'exonucleases and can functionally complement the yeast mutations. In Arabidopsis XRN3 acts as a suppressor of posttranscriptional gene silencing. Mutants accumulate excised miRNA products suggesting that XRN3 is involved in degradation of these products.; 5'-3' exoribonuclease 3 (XRN3); CONTAINS InterPro DOMAIN/s: 5'-3' exoribonuclease 2 (InterPro:IPR017151), Zinc finger, CCHC-type (InterPro:IPR001878), Putative 5-3 exonuclease (InterPro:IPR004859); BEST Arabidopsis thaliana protein match is: exoribonuclease 2 (TAIR:AT5G42540.1); Has 4264 Blast hits to 3505 proteins in 442 species: Archae - 2; Bacteria - 295; Metazoa - 1361; Fungi - 725; Plants - 751; Viruses - 31; Other Eukaryotes - 1099 (source: NCBI BLink). & (reliability: 344.0) &  (original description: no original description)","protein_coding"
"PSME_00004114-RA","No alias","Pseudotsuga menziesii","(at5g55860 : 94.0) Plant protein of unknown function (DUF827); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF827, plant (InterPro:IPR008545); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF827) (TAIR:AT1G12150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 188.0) &  (original description: no original description)","protein_coding"
"PSME_00004292-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00004712-RA","No alias","Pseudotsuga menziesii","(at1g76140 : 1049.0) Prolyl oligopeptidase family protein; FUNCTIONS IN: serine-type peptidase activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375), Peptidase S9A, oligopeptidase, N-terminal beta-propeller (InterPro:IPR004106), Peptidase S9A, prolyl oligopeptidase (InterPro:IPR002470); BEST Arabidopsis thaliana protein match is: Prolyl oligopeptidase family protein (TAIR:AT1G20380.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 2098.0) &  (original description: no original description)","protein_coding"
"PSME_00004773-RA","No alias","Pseudotsuga menziesii","(at3g26120 : 164.0) Similar to terminal ear1 in Zea mays. A member of mei2-like gene family; phylogenetic analysis revealed that TEL1 belongs to the third clade of mei2-like proteins (TEL clade), with conserved two N-terminal RNA recognition motifs (RRM), in addition to the C-terminal RRM, shared among all mei2-like proteins.; terminal EAR1-like 1 (TEL1); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: primary root apical meristem, cotyledon primordium, shoot apical meristem, floral meristem, embryonic shoot apical meristem; EXPRESSED DURING: D bilateral stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), RNA recognition motif 2 (InterPro:IPR007201), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: terminal EAR1-like 2 (TAIR:AT1G67770.1); Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q27k34|pla2_orysa : 118.0) Protein terminal ear1 homolog (Protein PLASTOCHRON2) (Protein LEAFY HEAD2) - Oryza sativa (Rice) & (reliability: 328.0) &  (original description: no original description)","protein_coding"
"PSME_00004822-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00004828-RA","No alias","Pseudotsuga menziesii","(at4g13650 : 573.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G16480.1); Has 61118 Blast hits to 14026 proteins in 284 species: Archae - 2; Bacteria - 18; Metazoa - 154; Fungi - 167; Plants - 59907; Viruses - 0; Other Eukaryotes - 870 (source: NCBI BLink). & (q76c99|rf1_orysa : 129.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1146.0) &  (original description: no original description)","protein_coding"
"PSME_00004865-RA","No alias","Pseudotsuga menziesii","(at1g65730 : 848.0) Arabidopsis thaliana metal-nicotianamine transporter YSL4; YELLOW STRIPE like 7 (YSL7); FUNCTIONS IN: oligopeptide transporter activity; INVOLVED IN: oligopeptide transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter OPT superfamily (InterPro:IPR004813); BEST Arabidopsis thaliana protein match is: YELLOW STRIPE like 5 (TAIR:AT3G17650.1); Has 1836 Blast hits to 1794 proteins in 556 species: Archae - 19; Bacteria - 893; Metazoa - 0; Fungi - 266; Plants - 510; Viruses - 1; Other Eukaryotes - 147 (source: NCBI BLink). & (reliability: 1534.0) &  (original description: no original description)","protein_coding"
"PSME_00005011-RA","No alias","Pseudotsuga menziesii","(at2g37050 : 250.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G67720.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8lkz1|nork_pea : 176.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 500.0) &  (original description: no original description)","protein_coding"
"PSME_00005548-RA","No alias","Pseudotsuga menziesii","(at3g02820 : 93.6) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: cell cycle, replication fork protection, response to DNA damage stimulus; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Replication fork protection component Swi3 (InterPro:IPR012923), Zinc finger, CCHC-type (InterPro:IPR001878); Has 415 Blast hits to 415 proteins in 134 species: Archae - 0; Bacteria - 4; Metazoa - 156; Fungi - 94; Plants - 93; Viruses - 28; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 187.2) &  (original description: no original description)","protein_coding"
"PSME_00005780-RA","No alias","Pseudotsuga menziesii","(q9slx0|ima1b_orysa : 90.1) Importin alpha-1b subunit - Oryza sativa (Rice) & (at3g06720 : 83.2) Encodes importin alpha involved in nuclear import.; AT-IMP; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus; LOCATED IN: cytosol, nuclear envelope, nucleolus, cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-alpha-like, importin-beta-binding domain (InterPro:IPR002652), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: importin alpha isoform 2 (TAIR:AT4G16143.2); Has 4059 Blast hits to 2974 proteins in 281 species: Archae - 4; Bacteria - 22; Metazoa - 1537; Fungi - 665; Plants - 1109; Viruses - 0; Other Eukaryotes - 722 (source: NCBI BLink). & (reliability: 166.4) &  (original description: no original description)","protein_coding"
"PSME_00005981-RA","No alias","Pseudotsuga menziesii","(at1g18370 : 1026.0) Encodes a kinesin HINKEL. Required for cytokinesis in pollen. Mutant has cytokinesis defects; seedling lethal.; HINKEL (HIK); FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: response to cyclopentenone, cellularization of the embryo sac, gametophyte development, pollen development, cytokinesis; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3490 (InterPro:IPR021881), Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: ATP binding microtubule motor family protein (TAIR:AT3G43210.1); Has 14045 Blast hits to 12964 proteins in 525 species: Archae - 35; Bacteria - 375; Metazoa - 6535; Fungi - 1633; Plants - 1984; Viruses - 5; Other Eukaryotes - 3478 (source: NCBI BLink). & (o23826|k125_tobac : 235.0) 125 kDa kinesin-related protein - Nicotiana tabacum (Common tobacco) & (reliability: 2052.0) &  (original description: no original description)","protein_coding"
"PSME_00006038-RA","No alias","Pseudotsuga menziesii","(at3g08720 : 159.0) Encodes a ribosomal-protein S6 kinase. Gene expression is induced by cold and salt (NaCl).  Activation of AtS6k is regulated by 1-naphthylacetic acid and kinetin, at least in part, via a lipid kinase-dependent pathway. Phosphorylates specifically mammalian and plant S6 at 25 degrees C but not at 37 degrees C. Involved in translational up-regulation of ribosomal proteins.; Arabidopsis thaliana protein kinase 19 (ATPK19); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), AGC-kinase, C-terminal (InterPro:IPR000961), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, C-terminal (InterPro:IPR017892), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: protein-serine kinase 1 (TAIR:AT3G08730.1); Has 133901 Blast hits to 131707 proteins in 4554 species: Archae - 204; Bacteria - 15943; Metazoa - 48718; Fungi - 13429; Plants - 32816; Viruses - 561; Other Eukaryotes - 22230 (source: NCBI BLink). & (reliability: 318.0) &  (original description: no original description)","protein_coding"
"PSME_00006073-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00006159-RA","No alias","Pseudotsuga menziesii","(at3g46790 : 260.0) Encodes a member of a PCMP (plant combinatorial and modular protein) family (PCMP-H subfamily) with 9 pentatricopeptide (PPR) repeats. The protein is involved the intergenic processing of chloroplast RNA between rps7 and ndhB, which is essential for ndhB translation.; CHLORORESPIRATORY REDUCTION 2 (CRR2); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 36401 Blast hits to 13536 proteins in 261 species: Archae - 0; Bacteria - 8; Metazoa - 92; Fungi - 72; Plants - 35786; Viruses - 0; Other Eukaryotes - 443 (source: NCBI BLink). & (reliability: 520.0) &  (original description: no original description)","protein_coding"
"PSME_00006539-RA","No alias","Pseudotsuga menziesii","(at1g35470 : 153.0) SPla/RYanodine receptor (SPRY) domain-containing protein; CONTAINS InterPro DOMAIN/s: B302 (SPRY)-like (InterPro:IPR001870), CTLH, C-terminal LisH motif (InterPro:IPR006595), SPla/RYanodine receptor SPRY (InterPro:IPR003877), Ran binding protein, CRA domain (InterPro:IPR019589), SPla/RYanodine receptor subgroup (InterPro:IPR018355), LisH dimerisation motif (InterPro:IPR006594), Ran binding protein-like, CRA domain (InterPro:IPR013144); BEST Arabidopsis thaliana protein match is: SPla/RYanodine receptor (SPRY) domain-containing protein (TAIR:AT4G09340.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 306.0) &  (original description: no original description)","protein_coding"
"PSME_00006615-RA","No alias","Pseudotsuga menziesii","(at4g02060 : 612.0) Member of the minichromosome maintenance complex, involved in DNA replication initiation. Abundant in proliferating and  endocycling tissues. Localized in the nucleus during G1, S and G2 phases of the  cell cycle, and are released into the cytoplasmic compartment during mitosis. Binds chromatin.; PROLIFERA (PRL); CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), ATPase, AAA+ type, core (InterPro:IPR003593), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 7 (InterPro:IPR008050); BEST Arabidopsis thaliana protein match is: minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT5G44635.1). & (q43704|mcm3_maize : 132.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 1224.0) &  (original description: no original description)","protein_coding"
"PSME_00006667-RA","No alias","Pseudotsuga menziesii","(at3g14360 : 397.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G42930.1); Has 1400 Blast hits to 1392 proteins in 294 species: Archae - 0; Bacteria - 352; Metazoa - 56; Fungi - 304; Plants - 428; Viruses - 0; Other Eukaryotes - 260 (source: NCBI BLink). & (reliability: 794.0) &  (original description: no original description)","protein_coding"
"PSME_00006699-RA","No alias","Pseudotsuga menziesii","(at1g11290 : 244.0) Pentatricopeptide Repeat Protein containing the DYW motif. Required for editing of multiple plastid transcripts. Endonuclease activity.; CHLORORESPIRATORY REDUCTION22 (CRR22); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 48258 Blast hits to 14436 proteins in 289 species: Archae - 1; Bacteria - 2; Metazoa - 166; Fungi - 164; Plants - 47192; Viruses - 0; Other Eukaryotes - 733 (source: NCBI BLink). & (o49923|adk_phypa : 156.0) Adenosine kinase (EC 2.7.1.20) (AK) (Adenosine 5'-phosphotransferase) - Physcomitrella patens (Moss) & (reliability: 488.0) &  (original description: no original description)","protein_coding"
"PSME_00006714-RA","No alias","Pseudotsuga menziesii","(at1g20720 : 268.0) RAD3-like DNA-binding helicase protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DEAD2 (InterPro:IPR010614), Helicase, superfamily 1/2, ATP-binding domain, DinG/Rad3-type (InterPro:IPR014013), Helicase-like, DEXD box c2 type (InterPro:IPR006554), DNA helicase (DNA repair), Rad3 type (InterPro:IPR013020), Helicase, ATP-dependent, c2 type (InterPro:IPR006555); BEST Arabidopsis thaliana protein match is: RAD3-like DNA-binding helicase protein (TAIR:AT1G20750.1); Has 2863 Blast hits to 2328 proteins in 675 species: Archae - 243; Bacteria - 679; Metazoa - 737; Fungi - 397; Plants - 210; Viruses - 5; Other Eukaryotes - 592 (source: NCBI BLink). & (reliability: 536.0) &  (original description: no original description)","protein_coding"
"PSME_00006795-RA","No alias","Pseudotsuga menziesii","(at5g22020 : 205.0) Calcium-dependent phosphotriesterase superfamily protein; FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: alkaloid biosynthetic process, biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Strictosidine synthase (InterPro:IPR004141), Strictosidine synthase, conserved region (InterPro:IPR018119), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: strictosidine synthase-like 3 (TAIR:AT1G08470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p18417|stsy_catro : 86.3) Strictosidine synthase precursor (EC 4.3.3.2) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 410.0) &  (original description: no original description)","protein_coding"
"PSME_00007222-RA","No alias","Pseudotsuga menziesii","(at1g09760 : 152.0) U2 small nuclear ribonucleoprotein A (U2A'); INVOLVED IN: nuclear mRNA splicing, via spliceosome, response to cold; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: U2A'/phosphoprotein 32 family A, C-terminal (InterPro:IPR003603); Has 8109 Blast hits to 6297 proteins in 450 species: Archae - 0; Bacteria - 3635; Metazoa - 3194; Fungi - 303; Plants - 219; Viruses - 2; Other Eukaryotes - 756 (source: NCBI BLink). & (reliability: 304.0) &  (original description: no original description)","protein_coding"
"PSME_00007292-RA","No alias","Pseudotsuga menziesii","(at4g13930 : 407.0) Encodes a serine hydroxymethyltransferase maximally expressed in root; serine hydroxymethyltransferase 4 (SHM4); FUNCTIONS IN: pyridoxal phosphate binding, glycine hydroxymethyltransferase activity, catalytic activity; INVOLVED IN: response to cadmium ion, glycine metabolic process, L-serine metabolic process; LOCATED IN: cytosol, plasma membrane, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Serine hydroxymethyltransferase, pyridoxal phosphate binding site (InterPro:IPR019798), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Serine hydroxymethyltransferase (InterPro:IPR001085); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT4G13890.1); Has 11689 Blast hits to 11661 proteins in 2862 species: Archae - 259; Bacteria - 6437; Metazoa - 341; Fungi - 289; Plants - 375; Viruses - 6; Other Eukaryotes - 3982 (source: NCBI BLink). & (p34899|glym_pea : 251.0) Serine hydroxymethyltransferase, mitochondrial precursor (EC 2.1.2.1) (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT) - Pisum sativum (Garden pea) & (reliability: 814.0) &  (original description: no original description)","protein_coding"
"PSME_00007367-RA","No alias","Pseudotsuga menziesii","(at1g18660 : 176.0) zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: ATP-dependent peptidase activity, binding, zinc ion binding; INVOLVED IN: proteolysis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S16, lon N-terminal (InterPro:IPR003111), Zinc finger, RING-type, conserved site (InterPro:IPR017907), Tetratricopeptide-like helical (InterPro:IPR011990), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: ATP-dependent protease La (LON) domain protein (TAIR:AT1G75460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 352.0) &  (original description: no original description)","protein_coding"
"PSME_00007405-RA","No alias","Pseudotsuga menziesii","(q8lkz1|nork_pea : 90.9) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (at1g67720 : 84.7) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G37050.3); Has 172111 Blast hits to 130582 proteins in 4641 species: Archae - 151; Bacteria - 14946; Metazoa - 47791; Fungi - 11011; Plants - 76783; Viruses - 518; Other Eukaryotes - 20911 (source: NCBI BLink). & (reliability: 168.6) &  (original description: no original description)","protein_coding"
"PSME_00007589-RA","No alias","Pseudotsuga menziesii","(at2g40260 : 115.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G38300.1); Has 1902 Blast hits to 1885 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 125; Fungi - 17; Plants - 1623; Viruses - 0; Other Eukaryotes - 137 (source: NCBI BLink). & (reliability: 230.0) &  (original description: no original description)","protein_coding"
"PSME_00007661-RA","No alias","Pseudotsuga menziesii","(at3g62240 : 207.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc ion binding;nucleic acid binding (TAIR:AT2G47090.1); Has 3461 Blast hits to 1592 proteins in 298 species: Archae - 0; Bacteria - 234; Metazoa - 759; Fungi - 420; Plants - 151; Viruses - 4; Other Eukaryotes - 1893 (source: NCBI BLink). & (reliability: 414.0) &  (original description: no original description)","protein_coding"
"PSME_00007681-RA","No alias","Pseudotsuga menziesii","(at1g80760 : 329.0) Encodes a protein with boron transporter activity. It helps to preferentially direct boron to young developing tissues in the shoot, such as immature leaves, under low boron conditions. This boron channel appears to be impermeable to water, unlike the closely related NIP5;1 boron transporter. This protein also allows the transport of glycerol, urea, and formimide but not larger uncharged solutes such as arabitol and sucrose when it is expressed heterologously.; NOD26-like intrinsic protein 6;1 (NIP6;1); CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: NOD26-like intrinsic protein 5;1 (TAIR:AT4G10380.1); Has 10266 Blast hits to 10221 proteins in 2131 species: Archae - 103; Bacteria - 5136; Metazoa - 1354; Fungi - 440; Plants - 2031; Viruses - 2; Other Eukaryotes - 1200 (source: NCBI BLink). & (p08995|no26_soybn : 230.0) Nodulin-26 (N-26) - Glycine max (Soybean) & (reliability: 658.0) &  (original description: no original description)","protein_coding"
"PSME_00007693-RA","No alias","Pseudotsuga menziesii","(at3g02820 : 81.6) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: cell cycle, replication fork protection, response to DNA damage stimulus; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Replication fork protection component Swi3 (InterPro:IPR012923), Zinc finger, CCHC-type (InterPro:IPR001878); Has 415 Blast hits to 415 proteins in 134 species: Archae - 0; Bacteria - 4; Metazoa - 156; Fungi - 94; Plants - 93; Viruses - 28; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 163.2) &  (original description: no original description)","protein_coding"
"PSME_00007745-RA","No alias","Pseudotsuga menziesii","(at5g08390 : 652.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G23430.1); Has 114222 Blast hits to 41452 proteins in 998 species: Archae - 86; Bacteria - 11863; Metazoa - 46637; Fungi - 24709; Plants - 15354; Viruses - 6; Other Eukaryotes - 15567 (source: NCBI BLink). & (p93107|pf20_chlre : 110.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 1304.0) &  (original description: no original description)","protein_coding"
"PSME_00007869-RA","No alias","Pseudotsuga menziesii","(p49296|acea_cucsa : 825.0) Isocitrate lyase (EC 4.1.3.1) (Isocitrase) (Isocitratase) (ICL) - Cucumis sativus (Cucumber) & (at3g21720 : 803.0) Encodes a glyoxylate cycle enzyme isocitrate lyase (ICL).; isocitrate lyase (ICL); FUNCTIONS IN: isocitrate lyase activity, catalytic activity; INVOLVED IN: carboxylic acid metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf whorl, seed, leaf; CONTAINS InterPro DOMAIN/s: Isocitrate lyase/phosphorylmutase, conserved site (InterPro:IPR018523), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Isocitrate lyase (InterPro:IPR006254), Isocitrate lyase/phosphorylmutase (InterPro:IPR000918); BEST Arabidopsis thaliana protein match is: Phosphoenolpyruvate carboxylase family protein (TAIR:AT1G77060.1); Has 9953 Blast hits to 7473 proteins in 1388 species: Archae - 150; Bacteria - 5572; Metazoa - 28; Fungi - 504; Plants - 171; Viruses - 0; Other Eukaryotes - 3528 (source: NCBI BLink). & (reliability: 1606.0) &  (original description: no original description)","protein_coding"
"PSME_00008030-RA","No alias","Pseudotsuga menziesii","(at5g12030 : 128.0) Encodes a cytosolic small heat shock protein with chaperone activity that is induced by heat and osmotic stress and is also expressed late in seed development.; heat shock protein 17.6A (HSP17.6A); FUNCTIONS IN: unfolded protein binding; INVOLVED IN: protein folding, response to high light intensity, response to hydrogen peroxide, response to heat, hyperosmotic response; LOCATED IN: cytosol; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: 17.6 kDa class II heat shock protein (TAIR:AT5G12020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q01545|hsp22_iponi : 124.0) 18.8 kDa class II heat shock protein - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 256.0) &  (original description: no original description)","protein_coding"
"PSME_00008045-RA","No alias","Pseudotsuga menziesii","(at5g38710 : 308.0) Methylenetetrahydrofolate reductase family protein; FUNCTIONS IN: proline dehydrogenase activity; INVOLVED IN: oxidation reduction, proline catabolic process, glutamate biosynthetic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Proline dehydrogenase (InterPro:IPR002872), Proline oxidase (InterPro:IPR015659); BEST Arabidopsis thaliana protein match is: Methylenetetrahydrofolate reductase family protein (TAIR:AT3G30775.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 616.0) &  (original description: no original description)","protein_coding"
"PSME_00008073-RA","No alias","Pseudotsuga menziesii","(at2g38080 : 619.0) Encodes a protein with similarity to putative laccase, a member of laccase family (17 members in Arabidopsis). Might be involved in cell wall biosynthesis. Mutants have a mild irregular xylem phenotype.; IRREGULAR XYLEM 12 (IRX12); FUNCTIONS IN: laccase activity; INVOLVED IN: secondary cell wall biogenesis; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 10 (TAIR:AT5G01190.1); Has 9472 Blast hits to 8326 proteins in 1422 species: Archae - 45; Bacteria - 3703; Metazoa - 467; Fungi - 3359; Plants - 1600; Viruses - 0; Other Eukaryotes - 298 (source: NCBI BLink). & (p24792|aso_cucma : 245.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucurbita maxima (Pumpkin) (Winter squash) & (reliability: 1238.0) &  (original description: no original description)","protein_coding"
"PSME_00008219-RA","No alias","Pseudotsuga menziesii","(at1g20610 : 211.0) Cyclin B2;3 (CYCB2;3); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN B2;4 (TAIR:AT1G76310.1); Has 4405 Blast hits to 4396 proteins in 374 species: Archae - 0; Bacteria - 7; Metazoa - 2039; Fungi - 549; Plants - 1150; Viruses - 30; Other Eukaryotes - 630 (source: NCBI BLink). & (p30278|ccnb2_medsa : 196.0) G2/mitotic-specific cyclin-2 (B-like cyclin) (CycMs2) (Fragment) - Medicago sativa (Alfalfa) & (reliability: 418.0) &  (original description: no original description)","protein_coding"
"PSME_00008300-RA","No alias","Pseudotsuga menziesii","(at3g48000 : 203.0) Encodes a putative (NAD+) aldehyde dehydrogenase.; aldehyde dehydrogenase 2B4 (ALDH2B4); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, aldehyde dehydrogenase (NAD) activity, ATP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 2B7 (TAIR:AT1G23800.1); Has 61695 Blast hits to 61296 proteins in 3003 species: Archae - 476; Bacteria - 35240; Metazoa - 2662; Fungi - 2127; Plants - 1668; Viruses - 0; Other Eukaryotes - 19522 (source: NCBI BLink). & (p17202|badh_spiol : 99.0) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Spinacia oleracea (Spinach) & (reliability: 406.0) &  (original description: no original description)","protein_coding"
"PSME_00008359-RA","No alias","Pseudotsuga menziesii","(at5g02050 : 139.0) Mitochondrial glycoprotein family protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, mitochondrial matrix; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial glycoprotein (InterPro:IPR003428); BEST Arabidopsis thaliana protein match is: Mitochondrial glycoprotein family protein (TAIR:AT3G55605.1); Has 498 Blast hits to 497 proteins in 162 species: Archae - 0; Bacteria - 2; Metazoa - 46; Fungi - 134; Plants - 219; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). & (reliability: 278.0) &  (original description: no original description)","protein_coding"
"PSME_00008409-RA","No alias","Pseudotsuga menziesii","(at3g02820 : 142.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: cell cycle, replication fork protection, response to DNA damage stimulus; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Replication fork protection component Swi3 (InterPro:IPR012923), Zinc finger, CCHC-type (InterPro:IPR001878); Has 415 Blast hits to 415 proteins in 134 species: Archae - 0; Bacteria - 4; Metazoa - 156; Fungi - 94; Plants - 93; Viruses - 28; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 284.0) &  (original description: no original description)","protein_coding"
"PSME_00008568-RA","No alias","Pseudotsuga menziesii","(at2g22125 : 419.0) binding; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Armadillo-like helical (InterPro:IPR011989), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Armadillo/beta-catenin-like repeat ; C2 calcium/lipid-binding domain (CaLB) protein (TAIR:AT1G77460.2); Has 7763 Blast hits to 3084 proteins in 288 species: Archae - 8; Bacteria - 60; Metazoa - 1765; Fungi - 937; Plants - 4329; Viruses - 0; Other Eukaryotes - 664 (source: NCBI BLink). & (reliability: 838.0) &  (original description: no original description)","protein_coding"
"PSME_00008638-RA","No alias","Pseudotsuga menziesii","(p49730|rir2_tobac : 548.0) Ribonucleoside-diphosphate reductase small chain (EC 1.17.4.1) (Ribonucleotide reductase small subunit) (Ribonucleoside-diphosphate reductase R2 subunit) - Nicotiana tabacum (Common tobacco) & (at3g27060 : 540.0) Encodes one of the 3 ribonucleotide reductase (RNR) small subunit genes. TSO2 transcription occurs predominantly at the S-phase of the cell cycle and its expression pattern is consistent with its role in dNDP  biosynthesis during DNA replication in actively dividing cells. Critical for cell cycle progression, DNA damage repair and plant development.; TSO MEANING 'UGLY' IN CHINESE 2 (TSO2); FUNCTIONS IN: oxidoreductase activity, transition metal ion binding, ribonucleoside-diphosphate reductase activity; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase-related (InterPro:IPR012348), Ribonucleotide reductase (InterPro:IPR000358), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078); BEST Arabidopsis thaliana protein match is: ribonucleotide reductase 2A (TAIR:AT3G23580.1); Has 9355 Blast hits to 9350 proteins in 2299 species: Archae - 34; Bacteria - 4270; Metazoa - 263; Fungi - 240; Plants - 185; Viruses - 729; Other Eukaryotes - 3634 (source: NCBI BLink). & (reliability: 1080.0) &  (original description: no original description)","protein_coding"
"PSME_00008845-RA","No alias","Pseudotsuga menziesii","(q5z627|ef1g3_orysa : 615.0) Elongation factor 1-gamma 3 (EF-1-gamma 3) (eEF-1B gamma 3) - Oryza sativa (Rice) & (at1g57720 : 601.0) Translation elongation factor EF1B, gamma chain; FUNCTIONS IN: copper ion binding, translation elongation factor activity; INVOLVED IN: response to cadmium ion, response to zinc ion; LOCATED IN: cell wall, plasma membrane, vacuole, membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Translation elongation factor EF1B, gamma chain, conserved (InterPro:IPR001662), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1B, gamma chain (TAIR:AT1G09640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1202.0) &  (original description: no original description)","protein_coding"
"PSME_00008902-RA","No alias","Pseudotsuga menziesii","(at1g70520 : 371.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 2 (CRK2); FUNCTIONS IN: kinase activity; INVOLVED IN: response to ozone; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (TAIR:AT5G40380.1); Has 123193 Blast hits to 121713 proteins in 4855 species: Archae - 110; Bacteria - 13886; Metazoa - 45515; Fungi - 10581; Plants - 34413; Viruses - 473; Other Eukaryotes - 18215 (source: NCBI BLink). & (q8l4h4|nork_medtr : 211.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 742.0) &  (original description: no original description)","protein_coding"
"PSME_00009103-RA","No alias","Pseudotsuga menziesii","(at1g11290 : 216.0) Pentatricopeptide Repeat Protein containing the DYW motif. Required for editing of multiple plastid transcripts. Endonuclease activity.; CHLORORESPIRATORY REDUCTION22 (CRR22); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 48258 Blast hits to 14436 proteins in 289 species: Archae - 1; Bacteria - 2; Metazoa - 166; Fungi - 164; Plants - 47192; Viruses - 0; Other Eukaryotes - 733 (source: NCBI BLink). & (reliability: 414.0) &  (original description: no original description)","protein_coding"
"PSME_00009162-RA","No alias","Pseudotsuga menziesii","(at1g14020 : 193.0) O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT2G03280.1); Has 821 Blast hits to 817 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 821; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 386.0) &  (original description: no original description)","protein_coding"
"PSME_00009213-RA","No alias","Pseudotsuga menziesii","(p53684|cdpk3_orysa : 230.0) Calcium-dependent protein kinase, isoform 11 (EC 2.7.11.1) (CDPK 11) - Oryza sativa (Rice) & (at3g10660 : 226.0) predicted to encode calcium-dependent  protein kinase and is localized to the ER. Protein is myristoylated in a cell-free extract. Changing the proposed myristoylated site, G residue in the amino terminal,  to A prevented the meristoylation .  The G to A mutation decreased AtCPK2 membrane association by approximately 50%.; calmodulin-domain protein kinase cdpk isoform 2 (CPK2); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium dependent protein kinase 1 (TAIR:AT5G04870.1); Has 145304 Blast hits to 132515 proteins in 4265 species: Archae - 224; Bacteria - 17128; Metazoa - 53382; Fungi - 18632; Plants - 28672; Viruses - 609; Other Eukaryotes - 26657 (source: NCBI BLink). & (reliability: 442.0) &  (original description: no original description)","protein_coding"
"PSME_00009662-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00009801-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00010119-RA","No alias","Pseudotsuga menziesii","(at5g57320 : 130.0) villin, putative; FUNCTIONS IN: actin binding; INVOLVED IN: cytoskeleton organization; LOCATED IN: cellular_component unknown; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Gelsolin (InterPro:IPR007122), Villin headpiece (InterPro:IPR003128), Gelsolin domain (InterPro:IPR007123); BEST Arabidopsis thaliana protein match is: villin 4 (TAIR:AT4G30160.1); Has 3179 Blast hits to 2033 proteins in 206 species: Archae - 0; Bacteria - 16; Metazoa - 2271; Fungi - 140; Plants - 219; Viruses - 0; Other Eukaryotes - 533 (source: NCBI BLink). & (reliability: 260.0) &  (original description: no original description)","protein_coding"
"PSME_00010124-RA","No alias","Pseudotsuga menziesii","(q6yuu5|mdr_orysa : 355.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (at3g28345 : 352.0) ABC transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: shoot apex, inflorescence meristem, cotyledon, hypocotyl, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 17 (TAIR:AT3G28380.1); Has 822177 Blast hits to 385706 proteins in 4160 species: Archae - 14477; Bacteria - 641696; Metazoa - 17642; Fungi - 12086; Plants - 9535; Viruses - 48; Other Eukaryotes - 126693 (source: NCBI BLink). & (reliability: 704.0) &  (original description: no original description)","protein_coding"
"PSME_00010142-RA","No alias","Pseudotsuga menziesii","(at1g02850 : 502.0) beta glucosidase 11 (BGLU11); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 10 (TAIR:AT4G27830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p49235|bglc_maize : 362.0) Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) & (reliability: 1004.0) &  (original description: no original description)","protein_coding"
"PSME_00010271-RA","No alias","Pseudotsuga menziesii","(at5g05390 : 664.0) putative laccase,  a member of laccase family of genes (17 members in Arabidopsis).; laccase 12 (LAC12); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 5 (TAIR:AT2G40370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p14133|aso_cucsa : 247.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucumis sativus (Cucumber) & (reliability: 1328.0) &  (original description: no original description)","protein_coding"
"PSME_00010554-RA","No alias","Pseudotsuga menziesii","(o24381|tlc1_soltu : 94.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (at1g15500 : 91.7) ATNTT2; FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, chloroplast envelope, cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: nucleotide transporter 1 (TAIR:AT1G80300.1); Has 767 Blast hits to 762 proteins in 173 species: Archae - 0; Bacteria - 466; Metazoa - 8; Fungi - 28; Plants - 101; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink). & (reliability: 183.4) &  (original description: no original description)","protein_coding"
"PSME_00010966-RA","No alias","Pseudotsuga menziesii","(at2g25220 : 102.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.06 six leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G32000.1). & (reliability: 204.0) &  (original description: no original description)","protein_coding"
"PSME_00010994-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00011072-RA","No alias","Pseudotsuga menziesii","(at5g10980 : 145.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleosome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3 (InterPro:IPR000164), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT4G40030.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q71h73|h33_vitvi : 145.0) Histone H3.3 - Vitis vinifera (Grape) & (reliability: 290.0) &  (original description: no original description)","protein_coding"
"PSME_00011231-RA","No alias","Pseudotsuga menziesii","(at2g22125 : 239.0) binding; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Armadillo-like helical (InterPro:IPR011989), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Armadillo/beta-catenin-like repeat ; C2 calcium/lipid-binding domain (CaLB) protein (TAIR:AT1G77460.2); Has 7763 Blast hits to 3084 proteins in 288 species: Archae - 8; Bacteria - 60; Metazoa - 1765; Fungi - 937; Plants - 4329; Viruses - 0; Other Eukaryotes - 664 (source: NCBI BLink). & (reliability: 478.0) &  (original description: no original description)","protein_coding"
"PSME_00011388-RA","No alias","Pseudotsuga menziesii","(at1g06430 : 338.0) encodes a FtsH protease that is localized to the chloroplast; FTSH protease 8 (FTSH8); FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity, zinc ion binding; INVOLVED IN: PSII associated light-harvesting complex II catabolic process; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FtsH extracellular protease family (TAIR:AT2G30950.1); Has 41562 Blast hits to 39150 proteins in 3282 species: Archae - 1592; Bacteria - 17123; Metazoa - 4966; Fungi - 3846; Plants - 3320; Viruses - 34; Other Eukaryotes - 10681 (source: NCBI BLink). & (o82150|ftsh_tobac : 248.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) (DS9) - Nicotiana tabacum (Common tobacco) & (reliability: 676.0) &  (original description: no original description)","protein_coding"
"PSME_00011518-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00011828-RA","No alias","Pseudotsuga menziesii","(at3g07130 : 426.0) Encodes PAP15, a purple acid phosphatase with phytase activity.  Expression of PAP15 is developmentally and temporally regulated, with strong expression at the early stages of seedling growth and pollen germination. The expression is also organ/tissue-specific, with strongest expression in the vasculature, pollen grains, and roots. Recombinant PAP protein exhibits broad substrate specificity with moderate phytase activity. PAP15 likely mobilizes phosphorus reserves in plants, particularly during seed and pollen germination.; purple acid phosphatase 15 (PAP15); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: pollen germination, seed germination; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: seedling growth, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 13 (TAIR:AT2G32770.3); Has 2322 Blast hits to 2305 proteins in 472 species: Archae - 7; Bacteria - 914; Metazoa - 228; Fungi - 75; Plants - 768; Viruses - 0; Other Eukaryotes - 330 (source: NCBI BLink). & (q09131|ppaf_soybn : 179.0) Purple acid phosphatase precursor (EC 3.1.3.2) (Manganese(II) purple acid phosphatase) - Glycine max (Soybean) & (reliability: 852.0) &  (original description: no original description)","protein_coding"
"PSME_00012127-RA","No alias","Pseudotsuga menziesii","(at1g18370 : 85.9) Encodes a kinesin HINKEL. Required for cytokinesis in pollen. Mutant has cytokinesis defects; seedling lethal.; HINKEL (HIK); FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: response to cyclopentenone, cellularization of the embryo sac, gametophyte development, pollen development, cytokinesis; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3490 (InterPro:IPR021881), Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: ATP binding microtubule motor family protein (TAIR:AT3G43210.1); Has 14045 Blast hits to 12964 proteins in 525 species: Archae - 35; Bacteria - 375; Metazoa - 6535; Fungi - 1633; Plants - 1984; Viruses - 5; Other Eukaryotes - 3478 (source: NCBI BLink). & (reliability: 171.8) &  (original description: no original description)","protein_coding"
"PSME_00012147-RA","No alias","Pseudotsuga menziesii","(at3g22590 : 262.0) Encodes PLANT HOMOLOGOUS TO PARAFIBROMIN (PHP), a homolog of human Paf1 Complex (Paf1C) subunit Parafibromin. Human Parafibromin assists in mediating output from the Wnt signaling pathway, and dysfunction of the encoding gene HRPT2 conditions specific cancer-related disease phenotypes. PHP resides in a ~670-kDa protein complex in nuclear extracts, and physically interacts with other known Paf1C-related proteins in vivo. Loss of PHP specifically conditioned accelerated phase transition from vegetative growth to flowering and resulted in misregulation of a very limited subset of genes that included the flowering repressor FLOWERING LOCUS C (FLC).; PLANT HOMOLOGOUS TO PARAFIBROMIN (PHP); CONTAINS InterPro DOMAIN/s: RNA polymerase II accessory factor, Cdc73 (InterPro:IPR007852); Has 502 Blast hits to 395 proteins in 198 species: Archae - 0; Bacteria - 0; Metazoa - 257; Fungi - 127; Plants - 42; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (reliability: 524.0) &  (original description: no original description)","protein_coding"
"PSME_00012261-RA","No alias","Pseudotsuga menziesii","(at1g65660 : 323.0) Encodes a CCHC zinc finger protein that may function as a step II splicing factor. In an epigenetic allele of SMP1 (in which SMP1 and SMP2 mRNA is reduced) organs are smaller and contain fewer cells.; SWELLMAP 1 (SMP1); CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Pre-mRNA splicing Prp18-interacting factor (InterPro:IPR021715); BEST Arabidopsis thaliana protein match is: Pre-mRNA splicing Prp18-interacting factor (TAIR:AT4G37120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 646.0) &  (original description: no original description)","protein_coding"
"PSME_00012373-RA","No alias","Pseudotsuga menziesii","(at2g41380 : 245.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G61210.1); Has 1429 Blast hits to 1424 proteins in 497 species: Archae - 6; Bacteria - 922; Metazoa - 80; Fungi - 179; Plants - 160; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink). & (reliability: 490.0) &  (original description: no original description)","protein_coding"
"PSME_00012572-RA","No alias","Pseudotsuga menziesii","(at3g54140 : 824.0) Encodes a di- and tri-peptide transporter that recognizes a variety of different amino acid combinations. GFP-tagged PTR1 localizes to the plasma membrane and has 8 to 11 predicted transmembrane domains. PTR1 is expressed in a number of different vascular tissues throughout the plant based on promoter:GUS expression analysis. ptr1 mutants have a lower dry weight than wild type plants when both are grown with Pro-Ala or Ala-Ala dipeptides as their nitrogen source, suggesting that PTR1 plays a role in dipeptide uptake in the roots. Furthermore N content of ptr1 mutants is lower than that of wild type plants when grown with Pro-Ala or a mixture of dipeptides as nitrogen source; peptide transporter 1 (PTR1); FUNCTIONS IN: dipeptide transporter activity, tripeptide transporter activity, transporter activity; INVOLVED IN: dipeptide transport, oligopeptide transport, nitrogen compound metabolic process, tripeptide transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 40 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: peptide transporter  5 (TAIR:AT5G01180.1); Has 8339 Blast hits to 7886 proteins in 1502 species: Archae - 0; Bacteria - 4164; Metazoa - 798; Fungi - 498; Plants - 2234; Viruses - 0; Other Eukaryotes - 645 (source: NCBI BLink). & (reliability: 1648.0) &  (original description: no original description)","protein_coding"
"PSME_00012609-RA","No alias","Pseudotsuga menziesii","(at5g20490 : 135.0) Encodes a member of the type XI myosin protein family involved in root hair growth, trichome development, and organelle trafficking. This gene appears to be expressed at low levels throughout the plant.; XIK; FUNCTIONS IN: motor activity; INVOLVED IN: in 11 processes; LOCATED IN: myosin complex; EXPRESSED IN: stem, fruit, flower, root, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: Myosin family protein with Dil domain (TAIR:AT1G54560.1); Has 39115 Blast hits to 25959 proteins in 2421 species: Archae - 443; Bacteria - 5231; Metazoa - 20936; Fungi - 2937; Plants - 2132; Viruses - 125; Other Eukaryotes - 7311 (source: NCBI BLink). & (reliability: 270.0) &  (original description: no original description)","protein_coding"
"PSME_00013219-RA","No alias","Pseudotsuga menziesii","(at5g64270 : 245.0) splicing factor, putative; FUNCTIONS IN: binding; INVOLVED IN: mRNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), Splicing factor 3B subunit 1 (InterPro:IPR015016), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 490.0) &  (original description: no original description)","protein_coding"
"PSME_00013300-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00013335-RA","No alias","Pseudotsuga menziesii","(at2g03120 : 446.0) homologous to Signal Peptide Peptidases (SPP), required for pollen development and pollen germination. No homozygotes could be recovered from a T-DNA insertion mutant.; signal peptide peptidase (SPP); FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: pollen germination, pollen development; LOCATED IN: endoplasmic reticulum, endoplasmic reticulum membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase A22, presenilin signal peptide (InterPro:IPR006639), Peptidase A22B, signal peptide peptidase (InterPro:IPR007369); BEST Arabidopsis thaliana protein match is: SIGNAL PEPTIDE PEPTIDASE-LIKE 1 (TAIR:AT4G33410.1); Has 989 Blast hits to 959 proteins in 196 species: Archae - 4; Bacteria - 0; Metazoa - 468; Fungi - 136; Plants - 243; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). & (reliability: 892.0) &  (original description: no original description)","protein_coding"
"PSME_00013639-RA","No alias","Pseudotsuga menziesii","(at3g10640 : 192.0) VPS60.1; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT5G04850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 384.0) &  (original description: no original description)","protein_coding"
"PSME_00013961-RA","No alias","Pseudotsuga menziesii","(at4g18910 : 278.0) Encodes an aquaporin homolog. Functions in arsenite transport and tolerance.When expressed in yeast cells can conduct hydrogen peroxide into those cells.; NOD26-like intrinsic protein 1;2 (NIP1;2); FUNCTIONS IN: water channel activity, arsenite transmembrane transporter activity; INVOLVED IN: transport, hydrogen peroxide transmembrane transport, response to arsenic, arsenite transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: NOD26-like major intrinsic protein 1 (TAIR:AT4G19030.1); Has 10753 Blast hits to 10647 proteins in 2223 species: Archae - 110; Bacteria - 5339; Metazoa - 1367; Fungi - 450; Plants - 2101; Viruses - 4; Other Eukaryotes - 1382 (source: NCBI BLink). & (p08995|no26_soybn : 268.0) Nodulin-26 (N-26) - Glycine max (Soybean) & (reliability: 556.0) &  (original description: no original description)","protein_coding"
"PSME_00014449-RA","No alias","Pseudotsuga menziesii","(at5g60020 : 734.0) putative laccase,  a member of laccase family of genes (17 members in Arabidopsis).; laccase 17 (LAC17); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 2 (TAIR:AT2G29130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p14133|aso_cucsa : 237.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucumis sativus (Cucumber) & (reliability: 1468.0) &  (original description: no original description)","protein_coding"
"PSME_00014526-RA","No alias","Pseudotsuga menziesii","(at1g67720 : 105.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G37050.3); Has 172111 Blast hits to 130582 proteins in 4641 species: Archae - 151; Bacteria - 14946; Metazoa - 47791; Fungi - 11011; Plants - 76783; Viruses - 518; Other Eukaryotes - 20911 (source: NCBI BLink). & (q8l4h4|nork_medtr : 87.8) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 206.0) &  (original description: no original description)","protein_coding"
"PSME_00014534-RA","No alias","Pseudotsuga menziesii","(at4g01130 : 150.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G26430.1); Has 3308 Blast hits to 3260 proteins in 151 species: Archae - 0; Bacteria - 130; Metazoa - 0; Fungi - 52; Plants - 3122; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (q7y1x1|est_hevbr : 128.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 300.0) &  (original description: no original description)","protein_coding"
"PSME_00014608-RA","No alias","Pseudotsuga menziesii","(at4g35800 : 127.0) Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit.; RNA polymerase II large subunit (NRPB1); FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription, transcription from RNA polymerase II promoter; LOCATED IN: nucleus, chloroplast, DNA-directed RNA polymerase II, core complex, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase II, heptapeptide repeat, eukaryotic (InterPro:IPR000684), RNA polymerase Rpb1, domain 7 (InterPro:IPR007073), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081), RNA polymerase Rpb1, domain 6 (InterPro:IPR007075); BEST Arabidopsis thaliana protein match is: nuclear RNA polymerase C1 (TAIR:AT5G60040.1); Has 181834 Blast hits to 82224 proteins in 9254 species: Archae - 731; Bacteria - 33255; Metazoa - 56600; Fungi - 34284; Plants - 19037; Viruses - 3576; Other Eukaryotes - 34351 (source: NCBI BLink). & (reliability: 254.0) &  (original description: no original description)","protein_coding"
"PSME_00014618-RA","No alias","Pseudotsuga menziesii","(at4g32850 : 352.0) Encodes a nuclear poly(A) polymerase. Located in the nucleus.; nuclear poly(a) polymerase (nPAP); CONTAINS InterPro DOMAIN/s: Poly(A) polymerase (InterPro:IPR014492), Nucleotidyltransferase, class I, C-terminal-like (InterPro:IPR011068), Poly(A) polymerase, central domain (InterPro:IPR007012), Nucleotidyl transferase domain (InterPro:IPR002934), Poly(A) polymerase, RNA-binding domain (InterPro:IPR007010); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 704.0) &  (original description: no original description)","protein_coding"
"PSME_00014701-RA","No alias","Pseudotsuga menziesii","(at3g46040 : 196.0) Regulated by TCP20.; ribosomal protein S15A D (RPS15AD); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S8 (InterPro:IPR000630); BEST Arabidopsis thaliana protein match is: Ribosomal protein S8 family protein (TAIR:AT5G59850.1); Has 3503 Blast hits to 3503 proteins in 1362 species: Archae - 277; Bacteria - 1878; Metazoa - 431; Fungi - 223; Plants - 255; Viruses - 0; Other Eukaryotes - 439 (source: NCBI BLink). & (q9at34|rs15a_dauca : 195.0) 40S ribosomal protein S15a - Daucus carota (Carrot) & (reliability: 392.0) &  (original description: no original description)","protein_coding"
"PSME_00015403-RA","No alias","Pseudotsuga menziesii","(at2g41705 : 273.0) camphor resistance CrcB family protein; CONTAINS InterPro DOMAIN/s: Camphor resistance CrcB protein (InterPro:IPR003691); Has 1596 Blast hits to 1594 proteins in 702 species: Archae - 22; Bacteria - 1268; Metazoa - 2; Fungi - 87; Plants - 37; Viruses - 0; Other Eukaryotes - 180 (source: NCBI BLink). & (reliability: 546.0) &  (original description: no original description)","protein_coding"
"PSME_00015432-RA","No alias","Pseudotsuga menziesii","(at3g51430 : 186.0) Although this enzyme is predicted to encode a strictosidine synthase (SS), it lacks a conserved catalytic glutamate residue found in active SS enzymes and it is not expected to have SS activity.; YELLOW-LEAF-SPECIFIC GENE 2 (YLS2); CONTAINS InterPro DOMAIN/s: Strictosidine synthase (InterPro:IPR004141), Strictosidine synthase, conserved region (InterPro:IPR018119), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT3G51440.1). & (reliability: 372.0) &  (original description: no original description)","protein_coding"
"PSME_00015546-RA","No alias","Pseudotsuga menziesii","(at5g03300 : 253.0) Encodes adenosine kinase 2 (ADK2), a typical, constitutively expressed housekeeping enzyme. Shows a high sequence identity with ADK1. Involved in salvage synthesis of adenylates and methyl recycling. Enzyme activity is substantially inhibited in roots, siliques and dry seeds by an unknown compound. May contribute to cytokinin interconversion.; adenosine kinase 2 (ADK2); FUNCTIONS IN: adenosine kinase activity, copper ion binding, kinase activity; INVOLVED IN: adenosine salvage; LOCATED IN: plasma membrane; EXPRESSED IN: 33 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173), Adenosine kinase (InterPro:IPR001805); BEST Arabidopsis thaliana protein match is: adenosine kinase 1 (TAIR:AT3G09820.1); Has 9730 Blast hits to 9724 proteins in 1887 species: Archae - 143; Bacteria - 5874; Metazoa - 382; Fungi - 207; Plants - 398; Viruses - 0; Other Eukaryotes - 2726 (source: NCBI BLink). & (o49923|adk_phypa : 221.0) Adenosine kinase (EC 2.7.1.20) (AK) (Adenosine 5'-phosphotransferase) - Physcomitrella patens (Moss) & (reliability: 506.0) &  (original description: no original description)","protein_coding"
"PSME_00016514-RA","No alias","Pseudotsuga menziesii","(at2g07690 : 870.0) Member of the minichromosome maintenance complex, involved in DNA replication initiation. Abundant in proliferating and  endocycling tissues. Localized in the nucleus during G1, S and G2 phases of the  cell cycle, and are released into the cytoplasmic compartment during mitosis. Binds chromatin.; MINICHROMOSOME MAINTENANCE 5 (MCM5); FUNCTIONS IN: DNA-dependent ATPase activity, DNA binding, ATP binding; INVOLVED IN: cell proliferation, DNA-dependent DNA replication initiation, DNA unwinding involved in replication; LOCATED IN: nuclear chromatin, nucleus, cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 5 (InterPro:IPR008048); BEST Arabidopsis thaliana protein match is: Minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT2G16440.1). & (q43704|mcm3_maize : 165.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 1740.0) &  (original description: no original description)","protein_coding"
"PSME_00016672-RA","No alias","Pseudotsuga menziesii","(at1g67820 : 293.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C,  manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT2G30020.1); Has 6733 Blast hits to 6560 proteins in 362 species: Archae - 6; Bacteria - 120; Metazoa - 1758; Fungi - 815; Plants - 2713; Viruses - 9; Other Eukaryotes - 1312 (source: NCBI BLink). & (reliability: 586.0) &  (original description: no original description)","protein_coding"
"PSME_00016714-RA","No alias","Pseudotsuga menziesii","(q6yuu5|mdr_orysa : 1107.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (at3g28345 : 1105.0) ABC transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: shoot apex, inflorescence meristem, cotyledon, hypocotyl, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 17 (TAIR:AT3G28380.1); Has 822177 Blast hits to 385706 proteins in 4160 species: Archae - 14477; Bacteria - 641696; Metazoa - 17642; Fungi - 12086; Plants - 9535; Viruses - 48; Other Eukaryotes - 126693 (source: NCBI BLink). & (reliability: 2210.0) &  (original description: no original description)","protein_coding"
"PSME_00016782-RA","No alias","Pseudotsuga menziesii","(at5g23290 : 95.5) prefoldin 5 (PFD5); FUNCTIONS IN: unfolded protein binding; INVOLVED IN: protein folding; LOCATED IN: prefoldin complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin alpha-like (InterPro:IPR004127), Prefoldin (InterPro:IPR009053), Prefoldin alpha subunit (InterPro:IPR011599); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 191.0) &  (original description: no original description)","protein_coding"
"PSME_00016835-RA","No alias","Pseudotsuga menziesii","(p28002|comt1_medsa : 153.0) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68) (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) - Medicago sativa (Alfalfa) & (at1g51990 : 150.0) O-methyltransferase family protein; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase 1 (TAIR:AT5G54160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 288.0) &  (original description: no original description)","protein_coding"
"PSME_00016940-RA","No alias","Pseudotsuga menziesii","(at5g47690 : 149.0) binding; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, nucleus; EXPRESSED IN: cotyledon, guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G77600.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 298.0) &  (original description: no original description)","protein_coding"
"PSME_00017024-RA","No alias","Pseudotsuga menziesii","(at3g02820 : 159.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: cell cycle, replication fork protection, response to DNA damage stimulus; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Replication fork protection component Swi3 (InterPro:IPR012923), Zinc finger, CCHC-type (InterPro:IPR001878); Has 415 Blast hits to 415 proteins in 134 species: Archae - 0; Bacteria - 4; Metazoa - 156; Fungi - 94; Plants - 93; Viruses - 28; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 318.0) &  (original description: no original description)","protein_coding"
"PSME_00017259-RA","No alias","Pseudotsuga menziesii","(at1g26840 : 315.0) Origin Recognition Complex subunit 6. Involved in the initiation of DNA replication. Regulated transcriptionally during cell cycle, peaking at G1/S-phase. Target of E2F/DF family of transcription factors.; origin recognition complex protein 6 (ORC6); FUNCTIONS IN: DNA binding; INVOLVED IN: DNA replication; LOCATED IN: origin recognition complex; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Origin recognition complex, subunit 6, metazoa/plant (InterPro:IPR020529), Origin recognition complex, subunit 6 (InterPro:IPR008721); Has 179 Blast hits to 179 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 105; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 630.0) &  (original description: no original description)","protein_coding"
"PSME_00017334-RA","No alias","Pseudotsuga menziesii","(at2g22125 : 631.0) binding; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Armadillo-like helical (InterPro:IPR011989), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Armadillo/beta-catenin-like repeat ; C2 calcium/lipid-binding domain (CaLB) protein (TAIR:AT1G77460.2); Has 7763 Blast hits to 3084 proteins in 288 species: Archae - 8; Bacteria - 60; Metazoa - 1765; Fungi - 937; Plants - 4329; Viruses - 0; Other Eukaryotes - 664 (source: NCBI BLink). & (reliability: 1262.0) &  (original description: no original description)","protein_coding"
"PSME_00017463-RA","No alias","Pseudotsuga menziesii","(at1g49050 : 392.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G44130.1); Has 2404 Blast hits to 2397 proteins in 188 species: Archae - 0; Bacteria - 0; Metazoa - 548; Fungi - 114; Plants - 1670; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink). & (q6yny7|asp1_orysa : 268.0) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1) (OSAP1) (Nucellin-like protein) - Oryza sativa (Rice) & (reliability: 784.0) &  (original description: no original description)","protein_coding"
"PSME_00017562-RA","No alias","Pseudotsuga menziesii","(q9fxt4|agal_orysa : 206.0) Alpha-galactosidase precursor (EC 3.2.1.22) (Melibiase) (Alpha-D-galactoside galactohydrolase) - Oryza sativa (Rice) & (at5g08370 : 204.0) alpha-galactosidase 2 (AGAL2); FUNCTIONS IN: alpha-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: positive regulation of flower development, leaf morphogenesis; LOCATED IN: plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Glycoside hydrolase, family 27 (InterPro:IPR002241), Glycoside hydrolase, clan GH-D (InterPro:IPR000111), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: alpha-galactosidase 1 (TAIR:AT5G08380.1); Has 1586 Blast hits to 1573 proteins in 339 species: Archae - 4; Bacteria - 587; Metazoa - 332; Fungi - 271; Plants - 223; Viruses - 0; Other Eukaryotes - 169 (source: NCBI BLink). & (reliability: 408.0) &  (original description: no original description)","protein_coding"
"PSME_00017602-RA","No alias","Pseudotsuga menziesii","(at3g17630 : 197.0) member of Putative Na+/H+ antiporter family; cation/H+ exchanger 19 (CHX19); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 18 (TAIR:AT5G41610.1); Has 10353 Blast hits to 10313 proteins in 2156 species: Archae - 388; Bacteria - 8084; Metazoa - 59; Fungi - 214; Plants - 674; Viruses - 0; Other Eukaryotes - 934 (source: NCBI BLink). & (reliability: 394.0) &  (original description: no original description)","protein_coding"
"PSME_00017652-RA","No alias","Pseudotsuga menziesii","(at1g64060 : 206.0) Interacts with AtrbohD gene to fine tune the spatial control of ROI production and hypersensitive response to cell in and around infection site.; respiratory burst oxidase protein F (RBOH F); FUNCTIONS IN: NAD(P)H oxidase activity; INVOLVED IN: in 10 processes; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Cytochrome b245, heavy chain (InterPro:IPR000778), EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-hand-like domain (InterPro:IPR011992), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130), NADPH oxidase Respiratory burst (InterPro:IPR013623), Ferric reductase, NAD binding (InterPro:IPR013121), EF-HAND 2 (InterPro:IPR018249), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938); BEST Arabidopsis thaliana protein match is: Riboflavin synthase-like superfamily protein (TAIR:AT4G11230.1); Has 2419 Blast hits to 2261 proteins in 348 species: Archae - 6; Bacteria - 265; Metazoa - 742; Fungi - 676; Plants - 525; Viruses - 0; Other Eukaryotes - 205 (source: NCBI BLink). & (reliability: 412.0) &  (original description: no original description)","protein_coding"
"PSME_00017991-RA","No alias","Pseudotsuga menziesii","(at5g02010 : 408.0) Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato.  Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily.; RHO guanyl-nucleotide exchange factor 7 (ROPGEF7); CONTAINS InterPro DOMAIN/s: Rop nucleotide exchanger, PRONE (InterPro:IPR005512); BEST Arabidopsis thaliana protein match is: ROP guanine nucleotide exchange factor 5 (TAIR:AT5G05940.1); Has 310 Blast hits to 307 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 308; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 814.0) &  (original description: no original description)","protein_coding"
"PSME_00018032-RA","No alias","Pseudotsuga menziesii","(at4g38600 : 145.0) encodes a member of HECT ubiquitin protein ligase family that is involved in trichome cell morphogenesis. Mutants in this gene exhibit supernumerary trichome branches and increased DNA content.; KAKTUS (KAK); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: trichome branching, DNA endoreduplication; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024), HECT (InterPro:IPR000569); BEST Arabidopsis thaliana protein match is: ubiquitin-protein ligase 4 (TAIR:AT5G02880.1); Has 6273 Blast hits to 5534 proteins in 324 species: Archae - 2; Bacteria - 240; Metazoa - 3391; Fungi - 909; Plants - 600; Viruses - 3; Other Eukaryotes - 1128 (source: NCBI BLink). & (reliability: 290.0) &  (original description: no original description)","protein_coding"
"PSME_00018057-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00018158-RA","No alias","Pseudotsuga menziesii","(at3g23330 : 90.5) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: mitochondrial editing factor  22 (TAIR:AT3G12770.1); Has 38045 Blast hits to 13879 proteins in 261 species: Archae - 0; Bacteria - 10; Metazoa - 50; Fungi - 109; Plants - 37267; Viruses - 0; Other Eukaryotes - 609 (source: NCBI BLink). & (reliability: 170.2) &  (original description: no original description)","protein_coding"
"PSME_00018292-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00018358-RA","No alias","Pseudotsuga menziesii","(at5g24330 : 139.0) Encodes a SET-domain protein, a H3K27 monomethyltransferases required for chromatin structure and gene silencing. Regulates heterochromatic DNA replication.  Contains a PCNA-binding domain.  ATXR6 accumulates preferentially during the late G1 or S phase, suggesting that it plays a role in cell-cycle regulation or progression.; ARABIDOPSIS TRITHORAX-RELATED PROTEIN 6 (ATXR6); CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: ARABIDOPSIS TRITHORAX-RELATED PROTEIN 5 (TAIR:AT5G09790.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 278.0) &  (original description: no original description)","protein_coding"
"PSME_00018365-RA","No alias","Pseudotsuga menziesii","(at2g28080 : 267.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36970.1); Has 5722 Blast hits to 5664 proteins in 294 species: Archae - 0; Bacteria - 48; Metazoa - 520; Fungi - 23; Plants - 5076; Viruses - 28; Other Eukaryotes - 27 (source: NCBI BLink). & (q41819|iaag_maize : 189.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (reliability: 534.0) &  (original description: no original description)","protein_coding"
"PSME_00018474-RA","No alias","Pseudotsuga menziesii","(at1g70520 : 113.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 2 (CRK2); FUNCTIONS IN: kinase activity; INVOLVED IN: response to ozone; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (TAIR:AT5G40380.1); Has 123193 Blast hits to 121713 proteins in 4855 species: Archae - 110; Bacteria - 13886; Metazoa - 45515; Fungi - 10581; Plants - 34413; Viruses - 473; Other Eukaryotes - 18215 (source: NCBI BLink). & (reliability: 210.0) &  (original description: no original description)","protein_coding"
"PSME_00018554-RA","No alias","Pseudotsuga menziesii","(at3g02660 : 266.0) EMBRYO DEFECTIVE 2768 (emb2768); FUNCTIONS IN: RNA binding, tyrosine-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial (InterPro:IPR002307), RNA-binding S4 (InterPro:IPR002942), Aminoacyl-tRNA synthetase, class Ib (InterPro:IPR002305); Has 9022 Blast hits to 9013 proteins in 2715 species: Archae - 16; Bacteria - 5542; Metazoa - 116; Fungi - 145; Plants - 38; Viruses - 0; Other Eukaryotes - 3165 (source: NCBI BLink). & (reliability: 532.0) &  (original description: no original description)","protein_coding"
"PSME_00018609-RA","No alias","Pseudotsuga menziesii","(at4g19420 : 395.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 543 Blast hits to 535 proteins in 96 species: Archae - 2; Bacteria - 44; Metazoa - 119; Fungi - 0; Plants - 298; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 790.0) &  (original description: no original description)","protein_coding"
"PSME_00018878-RA","No alias","Pseudotsuga menziesii","(at3g04470 : 147.0) Ankyrin repeat family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Protein of unknown function DUF3424 (InterPro:IPR021832), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT1G04780.1); Has 1133 Blast hits to 894 proteins in 124 species: Archae - 0; Bacteria - 10; Metazoa - 597; Fungi - 29; Plants - 361; Viruses - 4; Other Eukaryotes - 132 (source: NCBI BLink). & (reliability: 278.0) &  (original description: no original description)","protein_coding"
"PSME_00018977-RA","No alias","Pseudotsuga menziesii","(q9zts1|sym_orysa : 117.0) Probable methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA ligase) (MetRS) - Oryza sativa (Rice) & (at4g13780 : 113.0) methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative; FUNCTIONS IN: methionine-tRNA ligase activity, tRNA binding, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: response to cadmium ion, methionyl-tRNA aminoacylation; LOCATED IN: cytosol; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Aminoacyl-tRNA synthetase, class I (M) (InterPro:IPR015413), Methionyl-tRNA synthetase, class Ia (InterPro:IPR002304), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Methionyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR014758), tRNA-binding domain (InterPro:IPR002547); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT2G40660.1); Has 17985 Blast hits to 17920 proteins in 2983 species: Archae - 503; Bacteria - 10276; Metazoa - 591; Fungi - 596; Plants - 228; Viruses - 3; Other Eukaryotes - 5788 (source: NCBI BLink). & (reliability: 226.0) &  (original description: no original description)","protein_coding"
"PSME_00019114-RA","No alias","Pseudotsuga menziesii","(at5g03810 : 287.0) GDSL-like Lipase/Acylhydrolase family protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, lipase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase family protein (TAIR:AT5G03820.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p40603|apg_brana : 211.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 574.0) &  (original description: no original description)","protein_coding"
"PSME_00019160-RA","No alias","Pseudotsuga menziesii","(at1g47420 : 176.0) succinate dehydrogenase 5 (SDH5); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: gamma carbonic anhydrase 2 (TAIR:AT1G47260.1); Has 145 Blast hits to 145 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 144; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 352.0) &  (original description: no original description)","protein_coding"
"PSME_00019234-RA","No alias","Pseudotsuga menziesii","(at4g27730 : 86.3) oligopeptide transporter; oligopeptide transporter 1 (OPT6); FUNCTIONS IN: oligopeptide transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Tetrapeptide transporter, OPT1/isp4 (InterPro:IPR004648), Oligopeptide transporter OPT superfamily (InterPro:IPR004813); BEST Arabidopsis thaliana protein match is: oligopeptide transporter 9 (TAIR:AT5G53510.1); Has 1157 Blast hits to 1133 proteins in 115 species: Archae - 0; Bacteria - 21; Metazoa - 0; Fungi - 800; Plants - 327; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 172.6) &  (original description: no original description)","protein_coding"
"PSME_00019335-RA","No alias","Pseudotsuga menziesii","(at5g60160 : 409.0) Zn-dependent exopeptidases superfamily protein; FUNCTIONS IN: aminopeptidase activity, zinc ion binding; INVOLVED IN: response to cadmium ion, proteolysis; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M18, aminopeptidase I (InterPro:IPR001948); BEST Arabidopsis thaliana protein match is: Zn-dependent exopeptidases superfamily protein (TAIR:AT5G04710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q45055|apea_borbu : 80.1) Probable M18-family aminopeptidase 1 (EC 3.4.11.-) - Borrelia burgdorferi (Lyme disease spirochete) & (reliability: 818.0) &  (original description: no original description)","protein_coding"
"PSME_00019491-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00019539-RA","No alias","Pseudotsuga menziesii","(at1g65930 : 97.8) Encodes a NADP+-isocitrate dehydrogenase that is believed to function in the cytosol. It appears to contribute to NADPH production under oxidative stress, and thereby to participate in redox signalling linked to defense responses.; cytosolic NADP+-dependent isocitrate dehydrogenase (cICDH); FUNCTIONS IN: isocitrate dehydrogenase (NADP+) activity, copper ion binding; INVOLVED IN: in 7 processes; LOCATED IN: cytosol, apoplast, plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Isocitrate/isopropylmalate dehydrogenase (InterPro:IPR001804), Isocitrate dehydrogenase NADP-dependent, eukaryotic (InterPro:IPR004790), Isocitrate/isopropylmalate dehydrogenase, conserved site (InterPro:IPR019818); BEST Arabidopsis thaliana protein match is: isocitrate dehydrogenase (TAIR:AT1G54340.1); Has 5437 Blast hits to 5413 proteins in 1130 species: Archae - 48; Bacteria - 1243; Metazoa - 817; Fungi - 231; Plants - 475; Viruses - 0; Other Eukaryotes - 2623 (source: NCBI BLink). & (q40345|idhp_medsa : 97.8) Isocitrate dehydrogenase [NADP], chloroplast precursor (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (Fragment) - Medicago sativa (Alfalfa) & (reliability: 195.6) &  (original description: no original description)","protein_coding"
"PSME_00019588-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00019945-RA","No alias","Pseudotsuga menziesii","(at2g21790 : 232.0) encodes large subunit of ribonucleotide reductase involved in the production of deoxyribonucleoside triphosphates (dNTPs) for DNA replication and repair; ribonucleotide reductase 1 (RNR1); FUNCTIONS IN: ribonucleoside-diphosphate reductase activity, ATP binding; INVOLVED IN: response to cadmium ion, DNA replication, deoxyribonucleoside triphosphate biosynthetic process; LOCATED IN: ribonucleoside-diphosphate reductase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase large subunit, N-terminal (InterPro:IPR013509), Ribonucleoside-diphosphate reductase, alpha subunit (InterPro:IPR013346), ATP-cone (InterPro:IPR005144), Ribonucleotide reductase large subunit, C-terminal (InterPro:IPR000788), Ribonucleotide reductase R1 subunit, N-terminal (InterPro:IPR008926); Has 15326 Blast hits to 14804 proteins in 2790 species: Archae - 206; Bacteria - 6388; Metazoa - 177; Fungi - 215; Plants - 88; Viruses - 606; Other Eukaryotes - 7646 (source: NCBI BLink). & (reliability: 464.0) &  (original description: no original description)","protein_coding"
"PSME_00019976-RA","No alias","Pseudotsuga menziesii","(at1g30520 : 152.0) Encodes a chloroplast O-succinylbenzoyl-CoA ligase. Involved in phylloquinone biosynthesis. Knock mutant is seedling lethal.; acyl-activating enzyme 14 (AAE14); CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT4G19010.1); Has 73301 Blast hits to 67448 proteins in 3614 species: Archae - 1088; Bacteria - 49563; Metazoa - 3259; Fungi - 3557; Plants - 2200; Viruses - 1; Other Eukaryotes - 13633 (source: NCBI BLink). & (reliability: 304.0) &  (original description: no original description)","protein_coding"
"PSME_00020549-RA","No alias","Pseudotsuga menziesii","(at4g13970 : 142.0) zinc ion binding; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, SWIM-type (InterPro:IPR007527); BEST Arabidopsis thaliana protein match is: SWIM zinc finger family protein (TAIR:AT1G60560.1); Has 80 Blast hits to 80 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 25; Fungi - 2; Plants - 53; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 284.0) &  (original description: no original description)","protein_coding"
"PSME_00020554-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00020643-RA","No alias","Pseudotsuga menziesii","(at2g41450 : 130.0) N-acetyltransferases;N-acetyltransferases; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: intracellular; EXPRESSED IN: synergid; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: BRCT domain-containing DNA repair protein (TAIR:AT4G03130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 260.0) &  (original description: no original description)","protein_coding"
"PSME_00020787-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00020909-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00021041-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00021055-RA","No alias","Pseudotsuga menziesii","(at5g50920 : 279.0) Encodes a protein that is similar to ATP-dependent Clp protease ATP-binding subunit / ClpC. Involved in protein import into the chloroplast. May provide ATP source that drives the TIC (Translocon at the Inner envelope membrane of Chloroplasts) translocation machinery.; CLPC homologue 1 (CLPC1); FUNCTIONS IN: ATP-dependent peptidase activity, ATPase activity, ATP binding; INVOLVED IN: protein import into chloroplast stroma, regulation of chlorophyll biosynthetic process, protein targeting to chloroplast, chloroplast organization; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-2 (InterPro:IPR013093), ATPase, AAA+ type, core (InterPro:IPR003593), Chaperonin clpA/B (InterPro:IPR001270), Chaperonin ClpA/B, conserved site (InterPro:IPR018368), UvrB/UvrC protein (InterPro:IPR001943), Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: Clp ATPase (TAIR:AT3G48870.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p35100|clpc_pea : 277.0) ATP-dependent Clp protease ATP-binding subunit clpC homolog, chloroplast precursor - Pisum sativum (Garden pea) & (reliability: 558.0) &  (original description: no original description)","protein_coding"
"PSME_00021592-RA","No alias","Pseudotsuga menziesii","(at5g16900 : 381.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, leaf whorl, sperm cell, sepal, root; EXPRESSED DURING: petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G07560.1); Has 168111 Blast hits to 123484 proteins in 4541 species: Archae - 113; Bacteria - 13955; Metazoa - 44789; Fungi - 10304; Plants - 79478; Viruses - 406; Other Eukaryotes - 19066 (source: NCBI BLink). & (q8lkz1|nork_pea : 282.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 722.0) &  (original description: no original description)","protein_coding"
"PSME_00021693-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00021878-RA","No alias","Pseudotsuga menziesii","(at3g02820 : 155.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: cell cycle, replication fork protection, response to DNA damage stimulus; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Replication fork protection component Swi3 (InterPro:IPR012923), Zinc finger, CCHC-type (InterPro:IPR001878); Has 415 Blast hits to 415 proteins in 134 species: Archae - 0; Bacteria - 4; Metazoa - 156; Fungi - 94; Plants - 93; Viruses - 28; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 310.0) &  (original description: no original description)","protein_coding"
"PSME_00021975-RA","No alias","Pseudotsuga menziesii","(at3g12770 : 530.0) Encodes a pentatricopeptide repeat protein (PPR) protein involved in mitochondrial mRNA editing.; mitochondrial editing factor  22 (MEF22); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G11290.1); Has 43523 Blast hits to 14475 proteins in 290 species: Archae - 0; Bacteria - 15; Metazoa - 148; Fungi - 158; Plants - 42447; Viruses - 0; Other Eukaryotes - 755 (source: NCBI BLink). & (q76c99|rf1_orysa : 98.6) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 996.0) &  (original description: no original description)","protein_coding"
"PSME_00022036-RA","No alias","Pseudotsuga menziesii","(at1g60390 : 471.0) polygalacturonase 1 (PG1); FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: BURP (InterPro:IPR004873); BEST Arabidopsis thaliana protein match is: polygalacturonase 2 (TAIR:AT1G70370.2); Has 3094 Blast hits to 2364 proteins in 384 species: Archae - 8; Bacteria - 697; Metazoa - 473; Fungi - 328; Plants - 614; Viruses - 4; Other Eukaryotes - 970 (source: NCBI BLink). & (reliability: 942.0) &  (original description: no original description)","protein_coding"
"PSME_00022083-RA","No alias","Pseudotsuga menziesii","(at3g26100 : 530.0) Regulator of chromosome condensation (RCC1) family protein; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family protein (TAIR:AT3G15430.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1060.0) &  (original description: no original description)","protein_coding"
"PSME_00022158-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00022756-RA","No alias","Pseudotsuga menziesii","(at3g02820 : 85.1) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: cell cycle, replication fork protection, response to DNA damage stimulus; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Replication fork protection component Swi3 (InterPro:IPR012923), Zinc finger, CCHC-type (InterPro:IPR001878); Has 415 Blast hits to 415 proteins in 134 species: Archae - 0; Bacteria - 4; Metazoa - 156; Fungi - 94; Plants - 93; Viruses - 28; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 170.2) &  (original description: no original description)","protein_coding"
"PSME_00022903-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00023038-RA","No alias","Pseudotsuga menziesii","(at4g11050 : 771.0) glycosyl hydrolase 9C3 (GH9C3); FUNCTIONS IN: carbohydrate binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Carbohydrate-binding (InterPro:IPR008965), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701), Carbohydrate binding domain CBM49 (InterPro:IPR019028); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9C2 (TAIR:AT1G64390.1); Has 1895 Blast hits to 1880 proteins in 271 species: Archae - 2; Bacteria - 695; Metazoa - 181; Fungi - 19; Plants - 923; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (q5nat0|gun2_orysa : 691.0) Endoglucanase 2 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 2) (OsGLU5) - Oryza sativa (Rice) & (reliability: 1542.0) &  (original description: no original description)","protein_coding"
"PSME_00023109-RA","No alias","Pseudotsuga menziesii","(at4g30610 : 208.0) Encodes a secreted glycosylated serine carboxypeptidase with broad substrate preference that is involved in brassinosteroid signalling via BRI1.  It is proteolytically processed in vivo by a separate as yet unidentified protease.; BRI1 SUPPRESSOR 1 (BRS1); CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 22 (TAIR:AT2G24000.1); Has 3492 Blast hits to 3440 proteins in 297 species: Archae - 0; Bacteria - 59; Metazoa - 632; Fungi - 854; Plants - 1543; Viruses - 0; Other Eukaryotes - 404 (source: NCBI BLink). & (p08818|cbp2_horvu : 186.0) Serine carboxypeptidase 2 precursor (EC 3.4.16.6) (Serine carboxypeptidase II) (Carboxypeptidase D) (CP-MII) [Contains: Serine carboxypeptidase 2 chain A (Serine carboxypeptidase II chain A); Serine carboxypeptidase 2 chain B (Serine ca & (reliability: 416.0) &  (original description: no original description)","protein_coding"
"PSME_00023246-RA","No alias","Pseudotsuga menziesii","(at3g51680 : 356.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: cotyledon, root; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G26770.1); Has 119773 Blast hits to 119555 proteins in 3701 species: Archae - 1000; Bacteria - 77051; Metazoa - 6334; Fungi - 6742; Plants - 2947; Viruses - 5; Other Eukaryotes - 25694 (source: NCBI BLink). & (p50160|ts2_maize : 321.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (reliability: 712.0) &  (original description: no original description)","protein_coding"
"PSME_00023368-RA","No alias","Pseudotsuga menziesii","(q8w013|comt1_catro : 248.0) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68) (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at5g54160 : 240.0) A caffeic acid/5-hydroxyferulic acid O-methyltransferase. Interacts with 14-4-3 proteins in yeast 2 hybrid assay.  AtOMT1 (At5g54160) encodes a flavonol 3í-O-methyltransferase that is highly active towards quercetin and myricetin. The substrate specificity identifies the enzyme as flavonol 3í-methyltransferase which replaces the former annotation of the gene to encode a caffeic acid/5-hydroxyferulic acid O-methyltransferase; O-methyltransferase 1 (OMT1); FUNCTIONS IN: myricetin 3'-O-methyltransferase activity, quercetin 3-O-methyltransferase activity, caffeate O-methyltransferase activity; INVOLVED IN: lignin biosynthetic process, flavonol biosynthetic process; LOCATED IN: cytosol, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT1G77520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 466.0) &  (original description: no original description)","protein_coding"
"PSME_00023529-RA","No alias","Pseudotsuga menziesii","(at5g65720 : 230.0) cysteine desulfurase whose activity is dependent on AtSufE activation.; nitrogen fixation S (NIFS)-like 1 (NFS1); FUNCTIONS IN: transaminase activity, zinc ion binding, cysteine desulfurase activity, ATP binding; INVOLVED IN: iron-sulfur cluster assembly; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Cysteine desulfurase, NifS (InterPro:IPR016454); BEST Arabidopsis thaliana protein match is: chloroplastic NIFS-like cysteine desulfurase (TAIR:AT1G08490.1); Has 19057 Blast hits to 19051 proteins in 2851 species: Archae - 382; Bacteria - 13739; Metazoa - 315; Fungi - 216; Plants - 123; Viruses - 11; Other Eukaryotes - 4271 (source: NCBI BLink). & (reliability: 460.0) &  (original description: no original description)","protein_coding"
"PSME_00023690-RA","No alias","Pseudotsuga menziesii","(at1g28490 : 169.0) Encodes one of 24 Arabidopsis syntaxins. Its mRNA has been shown to be expressed.; syntaxin of plants 61 (SYP61); CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), t-SNARE (InterPro:IPR010989), Syntaxin/epimorphin, conserved site (InterPro:IPR006012), Syntaxin 6, N-terminal (InterPro:IPR015260); BEST Arabidopsis thaliana protein match is: syntaxin of plants 52 (TAIR:AT1G79590.2); Has 786 Blast hits to 786 proteins in 195 species: Archae - 0; Bacteria - 4; Metazoa - 244; Fungi - 238; Plants - 166; Viruses - 0; Other Eukaryotes - 134 (source: NCBI BLink). & (reliability: 338.0) &  (original description: no original description)","protein_coding"
"PSME_00023853-RA","No alias","Pseudotsuga menziesii","(at1g71120 : 243.0) Contains lipase signature motif and GDSL domain.; GDSL-motif lipase/hydrolase 6 (GLIP6); FUNCTIONS IN: lipase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-motif lipase 7 (TAIR:AT5G15720.1); Has 3560 Blast hits to 3519 proteins in 249 species: Archae - 0; Bacteria - 402; Metazoa - 0; Fungi - 22; Plants - 3125; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (p40603|apg_brana : 149.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 486.0) &  (original description: no original description)","protein_coding"
"PSME_00023871-RA","No alias","Pseudotsuga menziesii","(at5g03610 : 235.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G09930.1); Has 3390 Blast hits to 3360 proteins in 226 species: Archae - 0; Bacteria - 388; Metazoa - 0; Fungi - 3; Plants - 2981; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (q7y1x1|est_hevbr : 110.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 470.0) &  (original description: no original description)","protein_coding"
"PSME_00023926-RA","No alias","Pseudotsuga menziesii","(at1g80490 : 545.0) TOPLESS-related 1 (TPR1); INVOLVED IN: primary shoot apical meristem specification; LOCATED IN: cytosol; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), CTLH, C-terminal LisH motif (InterPro:IPR006595), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT1G15750.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1090.0) &  (original description: no original description)","protein_coding"
"PSME_00024351-RA","No alias","Pseudotsuga menziesii","(at5g51890 : 381.0) encodes peroxidase involved in the lignification of tracheary elements (TE) in roots; Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G42180.1); Has 4522 Blast hits to 4498 proteins in 281 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 153; Plants - 4313; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink). & (p37834|per1_orysa : 249.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 762.0) &  (original description: no original description)","protein_coding"
"PSME_00024356-RA","No alias","Pseudotsuga menziesii","(at3g02820 : 141.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: cell cycle, replication fork protection, response to DNA damage stimulus; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Replication fork protection component Swi3 (InterPro:IPR012923), Zinc finger, CCHC-type (InterPro:IPR001878); Has 415 Blast hits to 415 proteins in 134 species: Archae - 0; Bacteria - 4; Metazoa - 156; Fungi - 94; Plants - 93; Viruses - 28; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 282.0) &  (original description: no original description)","protein_coding"
"PSME_00024650-RA","No alias","Pseudotsuga menziesii","(at5g58430 : 509.0) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein B1 (EXO70B1); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: plasma membrane, exocyst; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein B2 (TAIR:AT1G07000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1018.0) &  (original description: no original description)","protein_coding"
"PSME_00024713-RA","No alias","Pseudotsuga menziesii","(at3g02820 : 133.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: cell cycle, replication fork protection, response to DNA damage stimulus; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Replication fork protection component Swi3 (InterPro:IPR012923), Zinc finger, CCHC-type (InterPro:IPR001878); Has 415 Blast hits to 415 proteins in 134 species: Archae - 0; Bacteria - 4; Metazoa - 156; Fungi - 94; Plants - 93; Viruses - 28; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 266.0) &  (original description: no original description)","protein_coding"
"PSME_00024926-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00024985-RA","No alias","Pseudotsuga menziesii","(p22195|per1_arahy : 166.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (at5g05340 : 145.0) Peroxidase superfamily protein; FUNCTIONS IN: protein binding, peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G58400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 288.0) &  (original description: no original description)","protein_coding"
"PSME_00025128-RA","No alias","Pseudotsuga menziesii","(at4g32720 : 87.0) Encodes AtLa1, a member of the highly abundant phosphoprotein La proteins.  Predominantly localized to the nucleoplasm and was also detected in the nucleolar cavity.  Has RNA binding activity.  Required for normal ribosome biogenesis and embryogenesis.; La protein 1 (La1); FUNCTIONS IN: RNA binding; INVOLVED IN: embryo development, ribosome biogenesis; LOCATED IN: nucleoplasm, cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA-binding protein Lupus La (InterPro:IPR006630), Lupus La protein (InterPro:IPR002344), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), RNA-binding motif (InterPro:IPR014886); BEST Arabidopsis thaliana protein match is: RNA recognition motif (RRM)-containing protein (TAIR:AT1G79880.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 174.0) &  (original description: no original description)","protein_coding"
"PSME_00025215-RA","No alias","Pseudotsuga menziesii","(at4g00100 : 212.0) Encodes a cytoplasmic ribosomal protein S13 homologue involved in early leaf development; ribosomal protein S13A (RPS13A); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, trichome morphogenesis, leaf morphogenesis, cytokinesis by cell plate formation; LOCATED IN: cytosolic small ribosomal subunit, nucleolus, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S13/S15, N-terminal (InterPro:IPR012606), Ribosomal protein S15 (InterPro:IPR000589), S15/NS1, RNA-binding (InterPro:IPR009068); BEST Arabidopsis thaliana protein match is: Ribosomal protein S13/S15 (TAIR:AT3G60770.1); Has 1100 Blast hits to 1100 proteins in 416 species: Archae - 259; Bacteria - 0; Metazoa - 343; Fungi - 146; Plants - 139; Viruses - 0; Other Eukaryotes - 213 (source: NCBI BLink). & (p62302|rs13_soybn : 211.0) 40S ribosomal protein S13 - Glycine max (Soybean) & (reliability: 424.0) &  (original description: no original description)","protein_coding"
"PSME_00025329-RA","No alias","Pseudotsuga menziesii","(at5g01950 : 245.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: chloroplast, plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G06840.1); Has 195622 Blast hits to 137374 proteins in 5075 species: Archae - 144; Bacteria - 18537; Metazoa - 60927; Fungi - 10261; Plants - 82888; Viruses - 345; Other Eukaryotes - 22520 (source: NCBI BLink). & (reliability: 490.0) &  (original description: no original description)","protein_coding"
"PSME_00025372-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00025448-RA","No alias","Pseudotsuga menziesii","(at5g21010 : 195.0) BTB-POZ and MATH domain 5 (BPM5); CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083), BTB/POZ fold (InterPro:IPR011333), BTB/POZ (InterPro:IPR013069), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: BTB-POZ and MATH domain 6 (TAIR:AT3G43700.1); Has 6893 Blast hits to 6668 proteins in 226 species: Archae - 0; Bacteria - 0; Metazoa - 4820; Fungi - 220; Plants - 1514; Viruses - 55; Other Eukaryotes - 284 (source: NCBI BLink). & (reliability: 376.0) &  (original description: no original description)","protein_coding"
"PSME_00025522-RA","No alias","Pseudotsuga menziesii"," (original description: no original description)","protein_coding"
"PSME_00025838-RA","No alias","Pseudotsuga menziesii","(q00268|pcna1_dauca : 444.0) Proliferating cell nuclear antigen (PCNA) (Cyclin) - Daucus carota (Carrot) & (at1g07370 : 430.0) Encodes putative proliferating cell nuclear antigen involved in cell cycle regulation.; proliferating cellular nuclear antigen 1 (PCNA1); CONTAINS InterPro DOMAIN/s: Proliferating cell nuclear antigen, PCNA (InterPro:IPR000730), Proliferating cell nuclear antigen, PCNA, C-terminal (InterPro:IPR022649), Proliferating cell nuclear antigen, PCNA, conserved site (InterPro:IPR022659), Proliferating cell nuclear antigen, PCNA, N-terminal (InterPro:IPR022648); BEST Arabidopsis thaliana protein match is: proliferating cell nuclear antigen 2 (TAIR:AT2G29570.1); Has 1857 Blast hits to 1845 proteins in 456 species: Archae - 391; Bacteria - 0; Metazoa - 315; Fungi - 169; Plants - 159; Viruses - 71; Other Eukaryotes - 752 (source: NCBI BLink). & (reliability: 860.0) &  (original description: no original description)","protein_coding"
"PSME_00026589-RA","No alias","Pseudotsuga menziesii","(at1g74250 : 127.0) DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: heat shock protein binding, zinc ion binding, nucleic acid binding; INVOLVED IN: protein folding; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Zinc finger, U1-type (InterPro:IPR003604), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DnaJ domain ;Myb-like DNA-binding domain (TAIR:AT3G11450.1); Has 93426 Blast hits to 65819 proteins in 3757 species: Archae - 599; Bacteria - 15939; Metazoa - 31666; Fungi - 9634; Plants - 4994; Viruses - 419; Other Eukaryotes - 30175 (source: NCBI BLink). & (reliability: 254.0) &  (original description: no original description)","protein_coding"
"PSME_00026721-RA","No alias","Pseudotsuga menziesii","(at1g26850 : 283.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; LOCATED IN: Golgi apparatus, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G18030.1); Has 1039 Blast hits to 1012 proteins in 98 species: Archae - 0; Bacteria - 124; Metazoa - 0; Fungi - 0; Plants - 910; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 566.0) &  (original description: no original description)","protein_coding"
"PSME_00026749-RA","No alias","Pseudotsuga menziesii","(at5g57610 : 192.0) Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain (TAIR:AT1G16270.2); Has 119780 Blast hits to 118332 proteins in 4796 species: Archae - 124; Bacteria - 12838; Metazoa - 46034; Fungi - 10270; Plants - 32306; Viruses - 451; Other Eukaryotes - 17757 (source: NCBI BLink). & (q7xlc6|hak11_orysa : 185.0) Probable potassium transporter 11 (OsHAK11) - Oryza sativa (Rice) & (reliability: 384.0) &  (original description: no original description)","protein_coding"
"PSME_00026761-RA","No alias","Pseudotsuga menziesii","(at4g29890 : 146.0) choline monooxygenase, putative (CMO-like); FUNCTIONS IN: electron carrier activity, oxidoreductase activity, iron ion binding, 2 iron, 2 sulfur cluster binding; INVOLVED IN: oxidation reduction, cellular aromatic compound metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941), Aromatic-ring-hydroxylating dioxygenase, alpha subunit (InterPro:IPR001663); Has 7402 Blast hits to 7400 proteins in 1015 species: Archae - 31; Bacteria - 4374; Metazoa - 10; Fungi - 153; Plants - 102; Viruses - 0; Other Eukaryotes - 2732 (source: NCBI BLink). & (o22553|chmo_betvu : 116.0) Choline monooxygenase, chloroplast precursor (EC 1.14.15.7) - Beta vulgaris (Sugar beet) & (reliability: 292.0) &  (original description: no original description)","protein_coding"
"PSME_00027093-RA","No alias","Pseudotsuga menziesii","(q40471|if4a9_tobac : 186.0) Eukaryotic initiation factor 4A-9 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-9) (eIF-4A-9) - Nicotiana tabacum (Common tobacco) & (at3g13920 : 182.0) eukaryotic translation initiation factor 4A-1; eukaryotic translation initiation factor 4A1 (EIF4A1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eif4a-2 (TAIR:AT1G54270.2). & (reliability: 364.0) &  (original description: no original description)","protein_coding"
"PSME_00027176-RA","No alias","Pseudotsuga menziesii","(at1g52880 : 226.0) Transcription factor with a NAC domain.  Homologous to the petunia gene NAM which is required for the development of the shoot. Expressed in the embryo.; NO APICAL MERISTEM (NAM); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein  2 (TAIR:AT3G15510.1); Has 3040 Blast hits to 3032 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 3034; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (q52qh4|nac68_orysa : 185.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (reliability: 448.0) &  (original description: no original description)","protein_coding"
"PSME_00027328-RA","No alias","Pseudotsuga menziesii","(at2g37870 : 119.0) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT5G05960.1); Has 479 Blast hits to 479 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 479; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 238.0) &  (original description: no original description)","protein_coding"
"PSME_00027377-RA","No alias","Pseudotsuga menziesii","(q949g3|pdr1_nicpl : 240.0) Pleiotropic drug resistance protein 1 (NpPDR1) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at1g15520 : 228.0) ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots.; pleiotropic drug resistance 12 (PDR12); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 11 (TAIR:AT1G66950.1); Has 377983 Blast hits to 279992 proteins in 3946 species: Archae - 7615; Bacteria - 304057; Metazoa - 8776; Fungi - 6428; Plants - 5794; Viruses - 2; Other Eukaryotes - 45311 (source: NCBI BLink). & (reliability: 456.0) &  (original description: no original description)","protein_coding"
"PSME_00027736-RA","No alias","Pseudotsuga menziesii","(at1g19600 : 297.0) pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: D-ribose catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT4G27600.1); Has 11746 Blast hits to 11745 proteins in 2087 species: Archae - 257; Bacteria - 7533; Metazoa - 331; Fungi - 90; Plants - 444; Viruses - 0; Other Eukaryotes - 3091 (source: NCBI BLink). & (reliability: 594.0) &  (original description: no original description)","protein_coding"
"PSME_00027827-RA","No alias","Pseudotsuga menziesii","(p54774|cdc48_soybn : 254.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (at3g53230 : 252.0) ATPase, AAA-type, CDC48 protein; FUNCTIONS IN: hydrolase activity, nucleoside-triphosphatase activity, binding, nucleotide binding, ATP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: cytosol, nucleolus, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Aspartate decarboxylase-like fold (InterPro:IPR009010), Cell division protein 48, CDC48, domain 2 (InterPro:IPR004201), ATPase, AAA-type, VAT, N-terminal (InterPro:IPR003338), ATPase, AAA-type, CDC48 (InterPro:IPR005938); BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein (TAIR:AT5G03340.1); Has 66274 Blast hits to 38860 proteins in 3301 species: Archae - 1748; Bacteria - 29009; Metazoa - 8678; Fungi - 6310; Plants - 5885; Viruses - 85; Other Eukaryotes - 14559 (source: NCBI BLink). & (reliability: 504.0) &  (original description: no original description)","protein_coding"
"PSME_00027951-RA","No alias","Pseudotsuga menziesii","(at3g02820 : 135.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: cell cycle, replication fork protection, response to DNA damage stimulus; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Replication fork protection component Swi3 (InterPro:IPR012923), Zinc finger, CCHC-type (InterPro:IPR001878); Has 415 Blast hits to 415 proteins in 134 species: Archae - 0; Bacteria - 4; Metazoa - 156; Fungi - 94; Plants - 93; Viruses - 28; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 270.0) &  (original description: no original description)","protein_coding"
"PSME_00028002-RA","No alias","Pseudotsuga menziesii","(at5g10200 : 392.0) ARM-repeat/Tetratricopeptide repeat (TPR)-like protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM-repeat/Tetratricopeptide repeat (TPR)-like protein (TAIR:AT5G43120.1); Has 2055 Blast hits to 1944 proteins in 240 species: Archae - 0; Bacteria - 3; Metazoa - 1049; Fungi - 393; Plants - 364; Viruses - 4; Other Eukaryotes - 242 (source: NCBI BLink). & (reliability: 784.0) &  (original description: no original description)","protein_coding"
"PSME_00028049-RA","No alias","Pseudotsuga menziesii","(at1g26560 : 122.0) beta glucosidase 40 (BGLU40); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: apoplast, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 41 (TAIR:AT5G54570.1); Has 11482 Blast hits to 11079 proteins in 1478 species: Archae - 142; Bacteria - 7937; Metazoa - 716; Fungi - 201; Plants - 1474; Viruses - 0; Other Eukaryotes - 1012 (source: NCBI BLink). & (p49235|bglc_maize : 111.0) Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) & (reliability: 244.0) &  (original description: no original description)","protein_coding"
"PSME_00028090-RA","No alias","Pseudotsuga menziesii","(at2g44710 : 303.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G00830.2); Has 31429 Blast hits to 23398 proteins in 2969 species: Archae - 812; Bacteria - 21040; Metazoa - 874; Fungi - 1027; Plants - 329; Viruses - 0; Other Eukaryotes - 7347 (source: NCBI BLink). & (reliability: 606.0) &  (original description: no original description)","protein_coding"
"PSME_00028209-RA","No alias","Pseudotsuga menziesii","(at3g02820 : 142.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: cell cycle, replication fork protection, response to DNA damage stimulus; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Replication fork protection component Swi3 (InterPro:IPR012923), Zinc finger, CCHC-type (InterPro:IPR001878); Has 415 Blast hits to 415 proteins in 134 species: Archae - 0; Bacteria - 4; Metazoa - 156; Fungi - 94; Plants - 93; Viruses - 28; Other Eukaryotes - 40 (source: NCBI BLink). & (q40345|idhp_medsa : 101.0) Isocitrate dehydrogenase [NADP], chloroplast precursor (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (Fragment) - Medicago sativa (Alfalfa) & (reliability: 284.0) &  (original description: no original description)","protein_coding"
"PSME_00028301-RA","No alias","Pseudotsuga menziesii","(at1g11390 : 311.0) Protein kinase superfamily protein; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G61640.1); Has 9400 Blast hits to 9333 proteins in 1787 species: Archae - 122; Bacteria - 4339; Metazoa - 436; Fungi - 531; Plants - 684; Viruses - 14; Other Eukaryotes - 3274 (source: NCBI BLink). & (reliability: 622.0) &  (original description: no original description)","protein_coding"
"PSME_00028325-RA","No alias","Pseudotsuga menziesii","(at1g44170 : 235.0) Encodes a protein similar to the aldehyde dehydrogenase cp-ADH from C.plantagineum. Constitutively expressed at low levels.; aldehyde dehydrogenase 3H1 (ALDH3H1); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, aldehyde dehydrogenase (NAD) activity; INVOLVED IN: response to desiccation, response to salt stress, response to abscisic acid stimulus; LOCATED IN: endoplasmic reticulum, plastid, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase NAD(P)-dependent (InterPro:IPR012394), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 3I1 (TAIR:AT4G34240.1); Has 53834 Blast hits to 53786 proteins in 2931 species: Archae - 469; Bacteria - 32921; Metazoa - 2418; Fungi - 2071; Plants - 990; Viruses - 0; Other Eukaryotes - 14965 (source: NCBI BLink). & (reliability: 470.0) &  (original description: no original description)","protein_coding"
"PSME_00028423-RA","No alias","Pseudotsuga menziesii","(at3g19010 : 156.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: flavonol synthase activity, oxidoreductase activity; INVOLVED IN: flavonoid biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G19000.1). & (o04847|dv4h_catro : 130.0) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 290.0) &  (original description: no original description)","protein_coding"
"PSME_00028712-RA","No alias","Pseudotsuga menziesii","(q9zrb0|tbb3_wheat : 259.0) Tubulin beta-3 chain (Beta-3 tubulin) - Triticum aestivum (Wheat) & (at5g12250 : 256.0) Encodes a beta-tubulin. Expression of TUB6 has been shown to decrease in response to cold treatment.; beta-6 tubulin (TUB6); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: microtubule-based process, response to salt stress, response to cold; LOCATED IN: microtubule cytoskeleton, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta tubulin (InterPro:IPR002453), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Beta tubulin, autoregulation binding site (InterPro:IPR013838), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: tubulin beta chain 3 (TAIR:AT5G62700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 512.0) &  (original description: no original description)","protein_coding"
"PSME_00028948-RA","No alias","Pseudotsuga menziesii","(at3g09440 : 174.0) Heat shock protein 70 (Hsp 70) family protein; FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to karrikin, response to heat; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock cognate protein 70-1 (TAIR:AT5G02500.1). & (p11143|hsp70_maize : 174.0) Heat shock 70 kDa protein - Zea mays (Maize) & (reliability: 348.0) &  (original description: no original description)","protein_coding"
"PSME_00029094-RA","No alias","Pseudotsuga menziesii","(p46287|rl11_medsa : 94.0) 60S ribosomal protein L11 (L5) - Medicago sativa (Alfalfa) & (at5g45775 : 93.6) Ribosomal L5P family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic large ribosomal subunit, vacuole; EXPRESSED IN: male gametophyte, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein L5 (InterPro:IPR002132), Ribosomal protein L5, conserved site (InterPro:IPR020929), Ribosomal protein L5, N-terminal (InterPro:IPR020927), Ribosomal protein L5, C-terminal (InterPro:IPR020928); BEST Arabidopsis thaliana protein match is: ribosomal protein L16B (TAIR:AT4G18730.1); Has 7854 Blast hits to 7854 proteins in 2814 species: Archae - 312; Bacteria - 5083; Metazoa - 254; Fungi - 163; Plants - 278; Viruses - 0; Other Eukaryotes - 1764 (source: NCBI BLink). & (reliability: 187.2) &  (original description: no original description)","protein_coding"
"PSME_00029145-RA","No alias","Pseudotsuga menziesii","(at4g10500 : 339.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: secondary metabolic process; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G10490.1); Has 8560 Blast hits to 8509 proteins in 1005 species: Archae - 0; Bacteria - 1116; Metazoa - 115; Fungi - 958; Plants - 4983; Viruses - 0; Other Eukaryotes - 1388 (source: NCBI BLink). & (q06942|fl3h_maldo : 219.0) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9) (Flavonone-3-hydroxylase) (F3H) (FHT) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 666.0) &  (original description: no original description)","protein_coding"
"PSME_00029567-RA","No alias","Pseudotsuga menziesii","(at1g19720 : 153.0) Pentatricopeptide repeat (PPR-like) superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, chloroplast, cytoplasm; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 61333 Blast hits to 15549 proteins in 316 species: Archae - 3; Bacteria - 46; Metazoa - 404; Fungi - 515; Plants - 59134; Viruses - 0; Other Eukaryotes - 1231 (source: NCBI BLink). & (q76c99|rf1_orysa : 83.6) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 306.0) &  (original description: no original description)","protein_coding"
"PSME_00029582-RA","No alias","Pseudotsuga menziesii","(at1g26560 : 166.0) beta glucosidase 40 (BGLU40); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: apoplast, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 41 (TAIR:AT5G54570.1); Has 11482 Blast hits to 11079 proteins in 1478 species: Archae - 142; Bacteria - 7937; Metazoa - 716; Fungi - 201; Plants - 1474; Viruses - 0; Other Eukaryotes - 1012 (source: NCBI BLink). & (p49235|bglc_maize : 110.0) Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) & (reliability: 332.0) &  (original description: no original description)","protein_coding"
"PSME_00029594-RA","No alias","Pseudotsuga menziesii","(at3g02820 : 114.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: cell cycle, replication fork protection, response to DNA damage stimulus; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Replication fork protection component Swi3 (InterPro:IPR012923), Zinc finger, CCHC-type (InterPro:IPR001878); Has 415 Blast hits to 415 proteins in 134 species: Archae - 0; Bacteria - 4; Metazoa - 156; Fungi - 94; Plants - 93; Viruses - 28; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 228.0) &  (original description: no original description)","protein_coding"
"PSME_00029612-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00029713-RA","No alias","Pseudotsuga menziesii","(p54774|cdc48_soybn : 455.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (at3g53230 : 451.0) ATPase, AAA-type, CDC48 protein; FUNCTIONS IN: hydrolase activity, nucleoside-triphosphatase activity, binding, nucleotide binding, ATP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: cytosol, nucleolus, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Aspartate decarboxylase-like fold (InterPro:IPR009010), Cell division protein 48, CDC48, domain 2 (InterPro:IPR004201), ATPase, AAA-type, VAT, N-terminal (InterPro:IPR003338), ATPase, AAA-type, CDC48 (InterPro:IPR005938); BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein (TAIR:AT5G03340.1); Has 66274 Blast hits to 38860 proteins in 3301 species: Archae - 1748; Bacteria - 29009; Metazoa - 8678; Fungi - 6310; Plants - 5885; Viruses - 85; Other Eukaryotes - 14559 (source: NCBI BLink). & (reliability: 902.0) &  (original description: no original description)","protein_coding"
"PSME_00029798-RA","No alias","Pseudotsuga menziesii","(at2g41740 : 395.0) Encodes a protein with high homology to animal villin.; villin 2 (VLN2); FUNCTIONS IN: actin binding, protein binding; INVOLVED IN: cytoskeleton organization; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Gelsolin (InterPro:IPR007122), Villin headpiece (InterPro:IPR003128), Gelsolin domain (InterPro:IPR007123); BEST Arabidopsis thaliana protein match is: villin 3 (TAIR:AT3G57410.1); Has 3753 Blast hits to 2353 proteins in 268 species: Archae - 0; Bacteria - 52; Metazoa - 2426; Fungi - 285; Plants - 242; Viruses - 2; Other Eukaryotes - 746 (source: NCBI BLink). & (reliability: 790.0) &  (original description: no original description)","protein_coding"
"PSME_00029816-RA","No alias","Pseudotsuga menziesii","(at4g20140 : 188.0) Encodes GASSHO1 (GSO1), a putative leucine-rich repeat transmembrane-type receptor kinase.  GSO1 and a homolog GSO2 (At5g44700) are required for the formation of a normal epidermal surface during embryogenesis.; GASSHO1 (GSO1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, embryo development, epidermis development; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT5G44700.1); Has 301150 Blast hits to 144127 proteins in 5007 species: Archae - 193; Bacteria - 28594; Metazoa - 96322; Fungi - 11667; Plants - 129816; Viruses - 411; Other Eukaryotes - 34147 (source: NCBI BLink). & (p93194|rpk1_iponi : 164.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 342.0) &  (original description: no original description)","protein_coding"
"PSME_00029866-RA","No alias","Pseudotsuga menziesii","(at1g72040 : 190.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: phosphotransferase activity, alcohol group as acceptor, ATP binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Deoxynucleoside kinase (InterPro:IPR002624); Has 2859 Blast hits to 2855 proteins in 704 species: Archae - 0; Bacteria - 1629; Metazoa - 493; Fungi - 0; Plants - 69; Viruses - 71; Other Eukaryotes - 597 (source: NCBI BLink). & (reliability: 380.0) &  (original description: no original description)","protein_coding"
"PSME_00030049-RA","No alias","Pseudotsuga menziesii","(q71vm4|ima1a_orysa : 404.0) Importin alpha-1a subunit - Oryza sativa (Rice) & (at3g06720 : 390.0) Encodes importin alpha involved in nuclear import.; AT-IMP; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus; LOCATED IN: cytosol, nuclear envelope, nucleolus, cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-alpha-like, importin-beta-binding domain (InterPro:IPR002652), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: importin alpha isoform 2 (TAIR:AT4G16143.2); Has 4059 Blast hits to 2974 proteins in 281 species: Archae - 4; Bacteria - 22; Metazoa - 1537; Fungi - 665; Plants - 1109; Viruses - 0; Other Eukaryotes - 722 (source: NCBI BLink). & (reliability: 780.0) &  (original description: no original description)","protein_coding"
"PSME_00030179-RA","No alias","Pseudotsuga menziesii","(at1g15500 : 420.0) ATNTT2; FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, chloroplast envelope, cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: nucleotide transporter 1 (TAIR:AT1G80300.1); Has 767 Blast hits to 762 proteins in 173 species: Archae - 0; Bacteria - 466; Metazoa - 8; Fungi - 28; Plants - 101; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink). & (o24381|tlc1_soltu : 410.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 840.0) &  (original description: no original description)","protein_coding"
"PSME_00030284-RA","No alias","Pseudotsuga menziesii","(at3g25100 : 129.0) Required for normal meiosis, may act in the last round of DNA replication prior to meiosis, sequence similar to yeast CDC45; cell division cycle 45 (CDC45); CONTAINS InterPro DOMAIN/s: CDC45-like protein (InterPro:IPR003874); Has 1810 Blast hits to 1657 proteins in 252 species: Archae - 0; Bacteria - 25; Metazoa - 666; Fungi - 449; Plants - 176; Viruses - 35; Other Eukaryotes - 459 (source: NCBI BLink). & (reliability: 258.0) &  (original description: no original description)","protein_coding"
"PSME_00030336-RA","No alias","Pseudotsuga menziesii","(at5g62710 : 554.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G31420.2); Has 175257 Blast hits to 128076 proteins in 4599 species: Archae - 150; Bacteria - 15408; Metazoa - 46877; Fungi - 10024; Plants - 81619; Viruses - 466; Other Eukaryotes - 20713 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 243.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 1108.0) &  (original description: no original description)","protein_coding"
"PSME_00030383-RA","No alias","Pseudotsuga menziesii","(at3g53230 : 409.0) ATPase, AAA-type, CDC48 protein; FUNCTIONS IN: hydrolase activity, nucleoside-triphosphatase activity, binding, nucleotide binding, ATP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: cytosol, nucleolus, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Aspartate decarboxylase-like fold (InterPro:IPR009010), Cell division protein 48, CDC48, domain 2 (InterPro:IPR004201), ATPase, AAA-type, VAT, N-terminal (InterPro:IPR003338), ATPase, AAA-type, CDC48 (InterPro:IPR005938); BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein (TAIR:AT5G03340.1); Has 66274 Blast hits to 38860 proteins in 3301 species: Archae - 1748; Bacteria - 29009; Metazoa - 8678; Fungi - 6310; Plants - 5885; Viruses - 85; Other Eukaryotes - 14559 (source: NCBI BLink). & (q96372|cdc48_capan : 402.0) Cell division cycle protein 48 homolog - Capsicum annuum (Bell pepper) & (reliability: 818.0) &  (original description: no original description)","protein_coding"
"PSME_00030524-RA","No alias","Pseudotsuga menziesii","(at3g12740 : 379.0) Physically interacts with ALA3, and is required for the phospholipid translocase activity of ALA3.; ALA-interacting subunit 1 (ALIS1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF284, transmembrane eukaryotic (InterPro:IPR005045); BEST Arabidopsis thaliana protein match is: LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein (TAIR:AT1G54320.1); Has 864 Blast hits to 864 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 252; Fungi - 234; Plants - 160; Viruses - 0; Other Eukaryotes - 218 (source: NCBI BLink). & (reliability: 758.0) &  (original description: no original description)","protein_coding"
"PSME_00030703-RA","No alias","Pseudotsuga menziesii","(p10290|mybc_maize : 187.0) Anthocyanin regulatory C1 protein - Zea mays (Maize) & (at5g49330 : 184.0) Member of the R2R3 factor gene family.; myb domain protein 111 (MYB111); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 12 (TAIR:AT2G47460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 368.0) &  (original description: no original description)","protein_coding"
"PSME_00030730-RA","No alias","Pseudotsuga menziesii","(at2g44580 : 282.0) zinc ion binding; CONTAINS InterPro DOMAIN/s: Sister chromatid cohesion protein DCC1 (InterPro:IPR019128); Has 214 Blast hits to 211 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 115; Fungi - 49; Plants - 36; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 564.0) &  (original description: no original description)","protein_coding"
"PSME_00030957-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00030967-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00031306-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00031398-RA","No alias","Pseudotsuga menziesii","(at2g28100 : 473.0) Encodes a protein with &#945;-fucosidase activity. The activity was assessed on 2'-fucosyl-lactitol. AtFUC1 was not able to act on XXFG substrates, at least when heterologously expressed in <i>Pichia pastoris</i>. The enzyme has been postulated to act on fucosylated substrates other than xyloglucan oligosaccharides.  was shown (<i>Pichia pastoris</i>) to hydrolyze fucose in 3- and 4-linkage , hence was characterized as alpha-L-3,4-fucosidase; alpha-L-fucosidase 1 (FUC1); FUNCTIONS IN: alpha-L-fucosidase activity; INVOLVED IN: glycoprotein catabolic process; LOCATED IN: vacuole; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 29 (InterPro:IPR000933), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); Has 2006 Blast hits to 1993 proteins in 389 species: Archae - 18; Bacteria - 1470; Metazoa - 203; Fungi - 6; Plants - 70; Viruses - 0; Other Eukaryotes - 239 (source: NCBI BLink). & (q7xur3|fuco1_orysa : 468.0) Putative alpha-L-fucosidase 1 precursor (EC 3.2.1.51) (Alpha-L-fucoside fucohydrolase) - Oryza sativa (Rice) & (reliability: 946.0) &  (original description: no original description)","protein_coding"
"PSME_00031489-RA","No alias","Pseudotsuga menziesii","(at5g11300 : 338.0) mitotic-like cyclin, core cell cycle gene that is expressed only in roots (RT_PCR), portions with mitotic activity only (whole mount in situ).; mitotic-like cyclin 3B from Arabidopsis (CYC3B); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin (InterPro:IPR006670), G2/mitotic-specific cyclin A (InterPro:IPR015453), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400); BEST Arabidopsis thaliana protein match is: cyclin a2;1 (TAIR:AT5G25380.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p25010|ccnal_dauca : 292.0) G2/mitotic-specific cyclin C13-1 (A-like cyclin) (Fragment) - Daucus carota (Carrot) & (reliability: 666.0) &  (original description: no original description)","protein_coding"
"PSME_00031954-RA","No alias","Pseudotsuga menziesii","(at5g12100 : 227.0) pentatricopeptide (PPR) repeat-containing protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G65560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 197.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 418.0) &  (original description: no original description)","protein_coding"
"PSME_00032081-RA","No alias","Pseudotsuga menziesii","(p49730|rir2_tobac : 546.0) Ribonucleoside-diphosphate reductase small chain (EC 1.17.4.1) (Ribonucleotide reductase small subunit) (Ribonucleoside-diphosphate reductase R2 subunit) - Nicotiana tabacum (Common tobacco) & (at3g27060 : 543.0) Encodes one of the 3 ribonucleotide reductase (RNR) small subunit genes. TSO2 transcription occurs predominantly at the S-phase of the cell cycle and its expression pattern is consistent with its role in dNDP  biosynthesis during DNA replication in actively dividing cells. Critical for cell cycle progression, DNA damage repair and plant development.; TSO MEANING 'UGLY' IN CHINESE 2 (TSO2); FUNCTIONS IN: oxidoreductase activity, transition metal ion binding, ribonucleoside-diphosphate reductase activity; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase-related (InterPro:IPR012348), Ribonucleotide reductase (InterPro:IPR000358), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078); BEST Arabidopsis thaliana protein match is: ribonucleotide reductase 2A (TAIR:AT3G23580.1); Has 9355 Blast hits to 9350 proteins in 2299 species: Archae - 34; Bacteria - 4270; Metazoa - 263; Fungi - 240; Plants - 185; Viruses - 729; Other Eukaryotes - 3634 (source: NCBI BLink). & (reliability: 1086.0) &  (original description: no original description)","protein_coding"
"PSME_00032371-RA","No alias","Pseudotsuga menziesii","(at2g38290 : 512.0) encodes a high-affinity ammonium transporter, which is expressed in shoot and root. Expression in root and shoot is under nitrogen and carbon dioxide regulation, respectively.; ammonium transporter 2 (AMT2); FUNCTIONS IN: ammonium transmembrane transporter activity, high affinity secondary active ammonium transmembrane transporter activity; INVOLVED IN: ammonium transport, response to nematode, cellular response to nitrogen starvation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ammonium transporter (InterPro:IPR001905), Blood group Rhesus C/E/D polypeptide (InterPro:IPR002229), Ammonium transporter, conserved site (InterPro:IPR018047); BEST Arabidopsis thaliana protein match is: ammonium transporter 1;2 (TAIR:AT1G64780.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1024.0) &  (original description: no original description)","protein_coding"
"PSME_00032830-RA","No alias","Pseudotsuga menziesii","(at4g39230 : 307.0) encodes a protein whose sequence is similar to phenylcoumaran benzylic ether reductase (PCBER), which catalyzes NADPH-dependent reduction of 8-5' linked lignans such as dehydrodiconiferyl alcohol to give isodihydrodehydrodiconiferyl alcohol.; NmrA-like negative transcriptional regulator family protein; FUNCTIONS IN: phenylcoumaran benzylic ether reductase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NmrA-like negative transcriptional regulator family protein (TAIR:AT1G75280.1); Has 1665 Blast hits to 1661 proteins in 371 species: Archae - 16; Bacteria - 474; Metazoa - 2; Fungi - 521; Plants - 522; Viruses - 3; Other Eukaryotes - 127 (source: NCBI BLink). & (p52579|ifrh_tobac : 298.0) Isoflavone reductase homolog A622 (EC 1.3.1.-) - Nicotiana tabacum (Common tobacco) & (reliability: 614.0) &  (original description: no original description)","protein_coding"
"PSME_00033131-RA","No alias","Pseudotsuga menziesii","(at4g13930 : 147.0) Encodes a serine hydroxymethyltransferase maximally expressed in root; serine hydroxymethyltransferase 4 (SHM4); FUNCTIONS IN: pyridoxal phosphate binding, glycine hydroxymethyltransferase activity, catalytic activity; INVOLVED IN: response to cadmium ion, glycine metabolic process, L-serine metabolic process; LOCATED IN: cytosol, plasma membrane, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Serine hydroxymethyltransferase, pyridoxal phosphate binding site (InterPro:IPR019798), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Serine hydroxymethyltransferase (InterPro:IPR001085); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT4G13890.1); Has 11689 Blast hits to 11661 proteins in 2862 species: Archae - 259; Bacteria - 6437; Metazoa - 341; Fungi - 289; Plants - 375; Viruses - 6; Other Eukaryotes - 3982 (source: NCBI BLink). & (reliability: 294.0) &  (original description: no original description)","protein_coding"
"PSME_00033256-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00033362-RA","No alias","Pseudotsuga menziesii","(at2g06050 : 403.0) Encodes a 12-oxophytodienoate reductase that is required for jasmonate biosynthesis. Mutants are male sterile and defective in pollen dehiscence. Shows activity towards 2,4,6-trinitrotoluene.; oxophytodienoate-reductase 3 (OPR3); FUNCTIONS IN: 12-oxophytodienoate reductase activity; INVOLVED IN: response to jasmonic acid stimulus, response to fungus, jasmonic acid biosynthetic process, response to wounding, response to ozone; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NADH:flavin oxidoreductase/NADH oxidase, N-terminal (InterPro:IPR001155), Aldolase-type TIM barrel (InterPro:IPR013785); BEST Arabidopsis thaliana protein match is: 12-oxophytodienoate reductase 2 (TAIR:AT1G76690.1); Has 13056 Blast hits to 13024 proteins in 2039 species: Archae - 127; Bacteria - 9671; Metazoa - 31; Fungi - 870; Plants - 454; Viruses - 0; Other Eukaryotes - 1903 (source: NCBI BLink). & (reliability: 806.0) &  (original description: no original description)","protein_coding"
"PSME_00033458-RA","No alias","Pseudotsuga menziesii","(at5g52450 : 300.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: MATE family transporter related protein (InterPro:IPR015521), Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT2G34360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 600.0) &  (original description: no original description)","protein_coding"
"PSME_00033506-RA","No alias","Pseudotsuga menziesii","(p49730|rir2_tobac : 528.0) Ribonucleoside-diphosphate reductase small chain (EC 1.17.4.1) (Ribonucleotide reductase small subunit) (Ribonucleoside-diphosphate reductase R2 subunit) - Nicotiana tabacum (Common tobacco) & (at3g27060 : 525.0) Encodes one of the 3 ribonucleotide reductase (RNR) small subunit genes. TSO2 transcription occurs predominantly at the S-phase of the cell cycle and its expression pattern is consistent with its role in dNDP  biosynthesis during DNA replication in actively dividing cells. Critical for cell cycle progression, DNA damage repair and plant development.; TSO MEANING 'UGLY' IN CHINESE 2 (TSO2); FUNCTIONS IN: oxidoreductase activity, transition metal ion binding, ribonucleoside-diphosphate reductase activity; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase-related (InterPro:IPR012348), Ribonucleotide reductase (InterPro:IPR000358), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078); BEST Arabidopsis thaliana protein match is: ribonucleotide reductase 2A (TAIR:AT3G23580.1); Has 9355 Blast hits to 9350 proteins in 2299 species: Archae - 34; Bacteria - 4270; Metazoa - 263; Fungi - 240; Plants - 185; Viruses - 729; Other Eukaryotes - 3634 (source: NCBI BLink). & (reliability: 1050.0) &  (original description: no original description)","protein_coding"
"PSME_00033632-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00033878-RA","No alias","Pseudotsuga menziesii","(p22196|per2_arahy : 108.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (at2g41480 : 106.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; EXPRESSED IN: root, leaf; EXPRESSED DURING: LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G64120.1); Has 4041 Blast hits to 4016 proteins in 197 species: Archae - 0; Bacteria - 4; Metazoa - 16; Fungi - 31; Plants - 3957; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (reliability: 212.0) &  (original description: no original description)","protein_coding"
"PSME_00033958-RA","No alias","Pseudotsuga menziesii","(at5g22750 : 87.8) DNA repair gene. gamma-radiation hypersensitive (RAD5) involved in stable transformation and T-DNA transfer; RAD5; FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA mediated transformation; EXPRESSED IN: embryo, sperm cell, seed; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), HIP116, Rad5p N-terminal (InterPro:IPR014905), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Helicase protein with RING/U-box domain (TAIR:AT5G43530.1); Has 27107 Blast hits to 18179 proteins in 1771 species: Archae - 108; Bacteria - 7266; Metazoa - 8140; Fungi - 5089; Plants - 2446; Viruses - 173; Other Eukaryotes - 3885 (source: NCBI BLink). & (reliability: 175.6) &  (original description: no original description)","protein_coding"
"PSME_00034238-RA","No alias","Pseudotsuga menziesii","(at1g65660 : 203.0) Encodes a CCHC zinc finger protein that may function as a step II splicing factor. In an epigenetic allele of SMP1 (in which SMP1 and SMP2 mRNA is reduced) organs are smaller and contain fewer cells.; SWELLMAP 1 (SMP1); CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Pre-mRNA splicing Prp18-interacting factor (InterPro:IPR021715); BEST Arabidopsis thaliana protein match is: Pre-mRNA splicing Prp18-interacting factor (TAIR:AT4G37120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 406.0) &  (original description: no original description)","protein_coding"
"PSME_00034330-RA","No alias","Pseudotsuga menziesii","(at3g02820 : 139.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: cell cycle, replication fork protection, response to DNA damage stimulus; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Replication fork protection component Swi3 (InterPro:IPR012923), Zinc finger, CCHC-type (InterPro:IPR001878); Has 415 Blast hits to 415 proteins in 134 species: Archae - 0; Bacteria - 4; Metazoa - 156; Fungi - 94; Plants - 93; Viruses - 28; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 278.0) &  (original description: no original description)","protein_coding"
"PSME_00034637-RA","No alias","Pseudotsuga menziesii","(at5g33406 : 87.8) hAT dimerisation domain-containing protein / transposase-related; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 707 Blast hits to 681 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 1; Plants - 680; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 175.6) &  (original description: no original description)","protein_coding"
"PSME_00034828-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00034858-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00035398-RA","No alias","Pseudotsuga menziesii","(at3g02200 : 143.0) Proteasome component (PCI) domain protein; CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717); BEST Arabidopsis thaliana protein match is: Proteasome component (PCI) domain protein (TAIR:AT5G15610.2); Has 657 Blast hits to 657 proteins in 209 species: Archae - 0; Bacteria - 2; Metazoa - 271; Fungi - 161; Plants - 136; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (reliability: 286.0) &  (original description: no original description)","protein_coding"
"PSME_00035746-RA","No alias","Pseudotsuga menziesii","(at2g38940 : 323.0) Encodes Pht1;4, a member of the Pht1 family of phosphate transporters which include: Pht1;1/At5g43350, Pht1;2/At5g43370, Pht1;3/At5g43360, Pht1;4/At2g38940, Pht1;5/At2g32830, Pht1;6/At5g43340, Pht1;7/At3g54700, Pht1;8/At1g20860, Pht1;9/At1g76430 (Plant Journal 2002, 31:341).; phosphate transporter 1;4 (PHT1;4); FUNCTIONS IN: phosphate transmembrane transporter activity, carbohydrate transmembrane transporter activity, inorganic phosphate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, phosphate transport, transmembrane transport; LOCATED IN: nucleus, plasma membrane, vacuole, membrane; EXPRESSED IN: male gametophyte, cultured cell, pollen tube, leaf; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Phosphate permease (InterPro:IPR004738), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: phosphate transporter 1;7 (TAIR:AT3G54700.1); Has 27225 Blast hits to 27133 proteins in 2002 species: Archae - 605; Bacteria - 19470; Metazoa - 1461; Fungi - 3457; Plants - 1450; Viruses - 2; Other Eukaryotes - 780 (source: NCBI BLink). & (reliability: 646.0) &  (original description: no original description)","protein_coding"
"PSME_00035869-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00035876-RA","No alias","Pseudotsuga menziesii","(at1g57870 : 137.0) shaggy-like kinase 42 (SK42); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: response to salt stress, hyperosmotic response; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: shaggy-like protein kinase 41 (TAIR:AT1G09840.6). & (q40518|msk1_tobac : 132.0) Shaggy-related protein kinase NtK-1 (EC 2.7.11.1) - Nicotiana tabacum (Common tobacco) & (reliability: 260.0) &  (original description: no original description)","protein_coding"
"PSME_00036059-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00036359-RA","No alias","Pseudotsuga menziesii","(at5g47500 : 137.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G19730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p83948|pme3_citsi : 83.2) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 274.0) &  (original description: no original description)","protein_coding"
"PSME_00036512-RA","No alias","Pseudotsuga menziesii","(at2g39210 : 136.0) Major facilitator superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transmembrane transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nodulin-like (InterPro:IPR010658), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G28120.1); Has 3072 Blast hits to 2927 proteins in 685 species: Archae - 32; Bacteria - 1223; Metazoa - 36; Fungi - 288; Plants - 601; Viruses - 0; Other Eukaryotes - 892 (source: NCBI BLink). & (reliability: 272.0) &  (original description: no original description)","protein_coding"
"PSME_00036820-RA","No alias","Pseudotsuga menziesii","(at3g02820 : 145.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: cell cycle, replication fork protection, response to DNA damage stimulus; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Replication fork protection component Swi3 (InterPro:IPR012923), Zinc finger, CCHC-type (InterPro:IPR001878); Has 415 Blast hits to 415 proteins in 134 species: Archae - 0; Bacteria - 4; Metazoa - 156; Fungi - 94; Plants - 93; Viruses - 28; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 290.0) &  (original description: no original description)","protein_coding"
"PSME_00036860-RA","No alias","Pseudotsuga menziesii","(at3g07130 : 208.0) Encodes PAP15, a purple acid phosphatase with phytase activity.  Expression of PAP15 is developmentally and temporally regulated, with strong expression at the early stages of seedling growth and pollen germination. The expression is also organ/tissue-specific, with strongest expression in the vasculature, pollen grains, and roots. Recombinant PAP protein exhibits broad substrate specificity with moderate phytase activity. PAP15 likely mobilizes phosphorus reserves in plants, particularly during seed and pollen germination.; purple acid phosphatase 15 (PAP15); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: pollen germination, seed germination; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: seedling growth, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 13 (TAIR:AT2G32770.3); Has 2322 Blast hits to 2305 proteins in 472 species: Archae - 7; Bacteria - 914; Metazoa - 228; Fungi - 75; Plants - 768; Viruses - 0; Other Eukaryotes - 330 (source: NCBI BLink). & (reliability: 416.0) &  (original description: no original description)","protein_coding"
"PSME_00036943-RA","No alias","Pseudotsuga menziesii","(at5g47500 : 142.0) Pectin lyase-like superfamily protein; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G19730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p83948|pme3_citsi : 82.4) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin methylesterase 3) (PE 3) - Citrus sinensis (Sweet orange) & (reliability: 284.0) &  (original description: no original description)","protein_coding"
"PSME_00037085-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00037304-RA","No alias","Pseudotsuga menziesii","(at5g19420 : 188.0) Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain; FUNCTIONS IN: chromatin binding, zinc ion binding, Ran GTPase binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, FYVE-type (InterPro:IPR000306), Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Zinc finger, FYVE-related (InterPro:IPR017455), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408), Pleckstrin homology-type (InterPro:IPR011993), Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain (TAIR:AT5G12350.1). & (reliability: 376.0) &  (original description: no original description)","protein_coding"
"PSME_00037313-RA","No alias","Pseudotsuga menziesii","(at1g69850 : 234.0) Encodes an inducible component of low-affinity nitrate uptake. mRNA found primarily in root hairs and the epidermis of roots.; nitrate transporter 1:2 (NRT1:2); FUNCTIONS IN: transporter activity, calcium ion binding; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G27040.1); Has 5870 Blast hits to 5639 proteins in 1033 species: Archae - 0; Bacteria - 2327; Metazoa - 503; Fungi - 400; Plants - 2186; Viruses - 0; Other Eukaryotes - 454 (source: NCBI BLink). & (reliability: 468.0) &  (original description: no original description)","protein_coding"
"PSME_00037777-RA","No alias","Pseudotsuga menziesii","(at3g53230 : 577.0) ATPase, AAA-type, CDC48 protein; FUNCTIONS IN: hydrolase activity, nucleoside-triphosphatase activity, binding, nucleotide binding, ATP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: cytosol, nucleolus, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Aspartate decarboxylase-like fold (InterPro:IPR009010), Cell division protein 48, CDC48, domain 2 (InterPro:IPR004201), ATPase, AAA-type, VAT, N-terminal (InterPro:IPR003338), ATPase, AAA-type, CDC48 (InterPro:IPR005938); BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein (TAIR:AT5G03340.1); Has 66274 Blast hits to 38860 proteins in 3301 species: Archae - 1748; Bacteria - 29009; Metazoa - 8678; Fungi - 6310; Plants - 5885; Viruses - 85; Other Eukaryotes - 14559 (source: NCBI BLink). & (p54774|cdc48_soybn : 577.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 1154.0) &  (original description: no original description)","protein_coding"
"PSME_00037848-RA","No alias","Pseudotsuga menziesii","(at3g54780 : 99.8) Zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: Zinc finger (C3HC4-type RING finger) family protein (TAIR:AT2G38970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 199.6) &  (original description: no original description)","protein_coding"
"PSME_00037862-RA","No alias","Pseudotsuga menziesii","(at1g07850 : 255.0) Protein of unknown function (DUF604); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: petal, leaf whorl, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT4G23490.1); Has 101 Blast hits to 95 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 16; Plants - 76; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 510.0) &  (original description: no original description)","protein_coding"
"PSME_00037905-RA","No alias","Pseudotsuga menziesii","(at3g48090 : 198.0) Component of R gene-mediated disease resistance in Arabidopsis thaliana with homology to eukaryotic lipases.; enhanced disease susceptibility 1 (EDS1); CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G48080.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 382.0) &  (original description: no original description)","protein_coding"
"PSME_00037909-RA","No alias","Pseudotsuga menziesii","(at4g29330 : 181.0) DERLIN-1 (DER1); CONTAINS InterPro DOMAIN/s: Der1-like (InterPro:IPR007599); BEST Arabidopsis thaliana protein match is: DERLIN-2.2 (TAIR:AT4G04860.1); Has 918 Blast hits to 916 proteins in 241 species: Archae - 0; Bacteria - 22; Metazoa - 340; Fungi - 200; Plants - 147; Viruses - 0; Other Eukaryotes - 209 (source: NCBI BLink). & (q4g2j5|der12_maize : 174.0) Derlin-1.2 (ZmDerlin1-2) - Zea mays (Maize) & (reliability: 362.0) &  (original description: no original description)","protein_coding"
"PSME_00037951-RA","No alias","Pseudotsuga menziesii","(at5g03340 : 610.0) ATPase, AAA-type, CDC48 protein; FUNCTIONS IN: protein binding, ATPase activity; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Aspartate decarboxylase-like fold (InterPro:IPR009010), Cell division protein 48, CDC48, domain 2 (InterPro:IPR004201), ATPase, AAA-type, VAT, N-terminal (InterPro:IPR003338), ATPase, AAA-type, CDC48 (InterPro:IPR005938); BEST Arabidopsis thaliana protein match is: cell division cycle 48 (TAIR:AT3G09840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p54774|cdc48_soybn : 610.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 1220.0) &  (original description: no original description)","protein_coding"
"PSME_00038031-RA","No alias","Pseudotsuga menziesii","(p24314|pcna_catro : 479.0) Proliferating cell nuclear antigen (PCNA) (Cyclin) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at1g07370 : 463.0) Encodes putative proliferating cell nuclear antigen involved in cell cycle regulation.; proliferating cellular nuclear antigen 1 (PCNA1); CONTAINS InterPro DOMAIN/s: Proliferating cell nuclear antigen, PCNA (InterPro:IPR000730), Proliferating cell nuclear antigen, PCNA, C-terminal (InterPro:IPR022649), Proliferating cell nuclear antigen, PCNA, conserved site (InterPro:IPR022659), Proliferating cell nuclear antigen, PCNA, N-terminal (InterPro:IPR022648); BEST Arabidopsis thaliana protein match is: proliferating cell nuclear antigen 2 (TAIR:AT2G29570.1); Has 1857 Blast hits to 1845 proteins in 456 species: Archae - 391; Bacteria - 0; Metazoa - 315; Fungi - 169; Plants - 159; Viruses - 71; Other Eukaryotes - 752 (source: NCBI BLink). & (reliability: 926.0) &  (original description: no original description)","protein_coding"
"PSME_00038290-RA","No alias","Pseudotsuga menziesii","(at5g16460 : 197.0) Putative adipose-regulatory protein (Seipin); CONTAINS InterPro DOMAIN/s: Adipose-regulatory protein, Seipin (InterPro:IPR009617); BEST Arabidopsis thaliana protein match is: Putative adipose-regulatory protein (Seipin) (TAIR:AT2G34380.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 394.0) &  (original description: no original description)","protein_coding"
"PSME_00038496-RA","No alias","Pseudotsuga menziesii","(at5g25930 : 385.0) Protein kinase family protein with leucine-rich repeat domain; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: receptor like protein 52 (TAIR:AT5G25910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p93194|rpk1_iponi : 231.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 770.0) &  (original description: no original description)","protein_coding"
"PSME_00038733-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00038804-RA","No alias","Pseudotsuga menziesii","(at4g36630 : 157.0) EMBRYO DEFECTIVE 2754 (EMB2754); FUNCTIONS IN: small GTPase regulator activity, binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Citron-like (InterPro:IPR001180), Vacuolar sorting protein 39/Transforming growth factor  beta receptor-associated domain 1 (InterPro:IPR019452), Armadillo-type fold (InterPro:IPR016024), Vacuolar sorting protein 39/Transforming growth factor  beta receptor-associated domain 2 (InterPro:IPR019453); Has 871 Blast hits to 660 proteins in 186 species: Archae - 0; Bacteria - 0; Metazoa - 376; Fungi - 292; Plants - 87; Viruses - 0; Other Eukaryotes - 116 (source: NCBI BLink). & (reliability: 314.0) &  (original description: no original description)","protein_coding"
"PSME_00038843-RA","No alias","Pseudotsuga menziesii","(at5g42800 : 216.0) dihydroflavonol reductase. Catalyzes the conversion of dihydroquercetin to leucocyanidin in the biosynthesis of anthocyanins.; dihydroflavonol 4-reductase (DFR); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G45400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p51108|dfra_maize : 205.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Zea mays (Maize) & (reliability: 432.0) &  (original description: no original description)","protein_coding"
"PSME_00039066-RA","No alias","Pseudotsuga menziesii","(at3g17450 : 92.8) hAT dimerisation domain-containing protein; FUNCTIONS IN: protein dimerization activity, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Zinc finger, BED-type predicted (InterPro:IPR003656), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily (TAIR:AT4G15020.2); Has 1280 Blast hits to 918 proteins in 67 species: Archae - 0; Bacteria - 8; Metazoa - 57; Fungi - 19; Plants - 1102; Viruses - 13; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 185.6) &  (original description: no original description)","protein_coding"
"PSME_00039083-RA","No alias","Pseudotsuga menziesii","(at2g01830 : 219.0) Histidine kinase: cytokinin-binding receptor that transduces cytokinin signals across the plasma membrane; WOODEN LEG (WOL); FUNCTIONS IN: osmosensor activity, cytokine binding, cytokinin receptor activity, protein histidine kinase activity, phosphoprotein phosphatase activity; INVOLVED IN: in 7 processes; LOCATED IN: membrane; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 2 (TAIR:AT5G35750.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 438.0) &  (original description: no original description)","protein_coding"
"PSME_00039496-RA","No alias","Pseudotsuga menziesii","(at3g28880 : 103.0) Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT2G03430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 206.0) &  (original description: no original description)","protein_coding"
"PSME_00039715-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00039855-RA","No alias","Pseudotsuga menziesii","(at5g57050 : 106.0) Encodes a protein phosphatase 2C and is involved in ABA signal transduction. Binds fibrillin preprotein in vitro and in vivo.; ABA INSENSITIVE 2 (ABI2); CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C,  manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT4G26080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 212.0) &  (original description: no original description)","protein_coding"
"PSME_00039987-RA","No alias","Pseudotsuga menziesii","(at5g35570 : 268.0) O-fucosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT2G37980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 536.0) &  (original description: no original description)","protein_coding"
"PSME_00040477-RA","No alias","Pseudotsuga menziesii","(at1g18370 : 88.6) Encodes a kinesin HINKEL. Required for cytokinesis in pollen. Mutant has cytokinesis defects; seedling lethal.; HINKEL (HIK); FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: response to cyclopentenone, cellularization of the embryo sac, gametophyte development, pollen development, cytokinesis; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3490 (InterPro:IPR021881), Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: ATP binding microtubule motor family protein (TAIR:AT3G43210.1); Has 14045 Blast hits to 12964 proteins in 525 species: Archae - 35; Bacteria - 375; Metazoa - 6535; Fungi - 1633; Plants - 1984; Viruses - 5; Other Eukaryotes - 3478 (source: NCBI BLink). & (reliability: 177.2) &  (original description: no original description)","protein_coding"
"PSME_00040729-RA","No alias","Pseudotsuga menziesii","(q4g2j4|der21_maize : 365.0) Derlin-2.1 (ZmDerlin2-1) - Zea mays (Maize) & (at4g04860 : 355.0) DERLIN-2.2 (DER2.2); CONTAINS InterPro DOMAIN/s: Der1-like (InterPro:IPR007599); BEST Arabidopsis thaliana protein match is: DERLIN-2.1 (TAIR:AT4G21810.1); Has 863 Blast hits to 862 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 343; Fungi - 190; Plants - 145; Viruses - 0; Other Eukaryotes - 185 (source: NCBI BLink). & (reliability: 700.0) &  (original description: no original description)","protein_coding"
"PSME_00040836-RA","No alias","Pseudotsuga menziesii","(at5g25610 : 91.3) responsive to dehydration 22 (RD22) mediated by ABA; RESPONSIVE TO DESSICATION 22 (RD22); FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: response to desiccation, response to salt stress, response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BURP (InterPro:IPR004873); BEST Arabidopsis thaliana protein match is: unknown seed protein like 1 (TAIR:AT1G49320.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 182.6) &  (original description: no original description)","protein_coding"
"PSME_00041014-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00041103-RA","No alias","Pseudotsuga menziesii","(at1g19600 : 315.0) pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: D-ribose catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT4G27600.1); Has 11746 Blast hits to 11745 proteins in 2087 species: Archae - 257; Bacteria - 7533; Metazoa - 331; Fungi - 90; Plants - 444; Viruses - 0; Other Eukaryotes - 3091 (source: NCBI BLink). & (reliability: 630.0) &  (original description: no original description)","protein_coding"
"PSME_00041333-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00041431-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00041558-RA","No alias","Pseudotsuga menziesii","(at4g24780 : 356.0) Pectin lyase-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G63180.1). & (p40973|pel_lillo : 235.0) Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily) & (reliability: 712.0) &  (original description: no original description)","protein_coding"
"PSME_00041687-RA","No alias","Pseudotsuga menziesii","(at3g03740 : 146.0) BTB-POZ and MATH domain 4 (BPM4); CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083), BTB/POZ fold (InterPro:IPR011333), BTB/POZ (InterPro:IPR013069), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: BTB-POZ and MATH domain 5 (TAIR:AT5G21010.1); Has 5789 Blast hits to 5682 proteins in 201 species: Archae - 0; Bacteria - 0; Metazoa - 3860; Fungi - 138; Plants - 1466; Viruses - 48; Other Eukaryotes - 277 (source: NCBI BLink). & (reliability: 280.0) &  (original description: no original description)","protein_coding"
"PSME_00041834-RA","No alias","Pseudotsuga menziesii","(q43033|tcmo_petcr : 337.0) Trans-cinnamate 4-monooxygenase (EC 1.14.13.11) (Cinnamic acid 4-hydroxylase) (CA4H) (C4H) (P450C4H) (Cytochrome P450 73) - Petroselinum crispum (Parsley) (Petroselinum hortense) & (at2g30490 : 331.0) Encodes a cinnamate-4-hydroxylase. Mutations in this gene impact phenylpropanoid metabolism, growth and development.; cinnamate-4-hydroxylase (C4H); FUNCTIONS IN: trans-cinnamate 4-monooxygenase activity; INVOLVED IN: in 9 processes; LOCATED IN: endoplasmic reticulum, plasma membrane, membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 98, subfamily A, polypeptide 3 (TAIR:AT2G40890.1); Has 31278 Blast hits to 31002 proteins in 1609 species: Archae - 48; Bacteria - 2734; Metazoa - 11804; Fungi - 6596; Plants - 9113; Viruses - 3; Other Eukaryotes - 980 (source: NCBI BLink). & (reliability: 662.0) &  (original description: no original description)","protein_coding"
"PSME_00042038-RA","No alias","Pseudotsuga menziesii","(at5g01930 : 509.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT5G66460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1018.0) &  (original description: no original description)","protein_coding"
"PSME_00042096-RA","No alias","Pseudotsuga menziesii","(at5g67270 : 164.0) encodes a homolog of animal microtubule-end-binding protein. There are two other members of this family. EB1 forms foci at regions where the minus ends of microtubules are gathered during mitosis and early cytokinesis.; end binding protein 1C (EB1C); CONTAINS InterPro DOMAIN/s: Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715), EB1, C-terminal (InterPro:IPR004953); BEST Arabidopsis thaliana protein match is: microtubule end binding protein EB1A (TAIR:AT3G47690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 328.0) &  (original description: no original description)","protein_coding"
"PSME_00042480-RA","No alias","Pseudotsuga menziesii","(at2g34930 : 87.8) disease resistance family protein / LRR family protein; INVOLVED IN: signal transduction, defense response to fungus, defense response; LOCATED IN: cell wall; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT4G20140.1); Has 135121 Blast hits to 32840 proteins in 1181 species: Archae - 56; Bacteria - 8201; Metazoa - 34800; Fungi - 1569; Plants - 79859; Viruses - 2; Other Eukaryotes - 10634 (source: NCBI BLink). & (reliability: 175.6) &  (original description: no original description)","protein_coding"
"PSME_00042489-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00042533-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00042816-RA","No alias","Pseudotsuga menziesii","(at2g24130 : 468.0) Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47570.1); Has 211952 Blast hits to 136025 proteins in 5092 species: Archae - 179; Bacteria - 23123; Metazoa - 70875; Fungi - 10647; Plants - 82602; Viruses - 325; Other Eukaryotes - 24201 (source: NCBI BLink). & (p93194|rpk1_iponi : 292.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 936.0) &  (original description: no original description)","protein_coding"
"PSME_00042820-RA","No alias","Pseudotsuga menziesii","(at5g65360 : 97.1) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: chloroplast, nucleosome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3 (InterPro:IPR000164), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G10400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p68428|h32_wheat : 97.1) Histone H3.2 - Triticum aestivum (Wheat) & (reliability: 194.2) &  (original description: no original description)","protein_coding"
"PSME_00042888-RA","No alias","Pseudotsuga menziesii","(at3g02820 : 127.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: cell cycle, replication fork protection, response to DNA damage stimulus; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Replication fork protection component Swi3 (InterPro:IPR012923), Zinc finger, CCHC-type (InterPro:IPR001878); Has 415 Blast hits to 415 proteins in 134 species: Archae - 0; Bacteria - 4; Metazoa - 156; Fungi - 94; Plants - 93; Viruses - 28; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 254.0) &  (original description: no original description)","protein_coding"
"PSME_00043015-RA","No alias","Pseudotsuga menziesii","(at2g28500 : 127.0) LOB domain-containing protein 11 (LBD11); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 1 (TAIR:AT1G07900.1); Has 1191 Blast hits to 1170 proteins in 85 species: Archae - 8; Bacteria - 66; Metazoa - 21; Fungi - 2; Plants - 1049; Viruses - 10; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 254.0) &  (original description: no original description)","protein_coding"
"PSME_00043063-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00043165-RA","No alias","Pseudotsuga menziesii","(at3g13770 : 384.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 37890 Blast hits to 13461 proteins in 236 species: Archae - 0; Bacteria - 8; Metazoa - 36; Fungi - 51; Plants - 37361; Viruses - 0; Other Eukaryotes - 434 (source: NCBI BLink). & (q76c99|rf1_orysa : 94.7) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 762.0) &  (original description: no original description)","protein_coding"
"PSME_00043404-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00043530-RA","No alias","Pseudotsuga menziesii","(at1g77120 : 244.0) Catalyzes the reduction of acetaldehyde using NADH as reductant. Requires zinc for activity. Dimer. Anaerobic response polypeptide (ANP). Fermentation. The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.; alcohol dehydrogenase 1 (ADH1); FUNCTIONS IN: alcohol dehydrogenase (NAD) activity; INVOLVED IN: response to cadmium ion, cellular respiration, response to salt stress, response to hypoxia, response to osmotic stress; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding dehydrogenase family protein (TAIR:AT5G43940.1); Has 34806 Blast hits to 34785 proteins in 3218 species: Archae - 735; Bacteria - 22358; Metazoa - 1323; Fungi - 2490; Plants - 4199; Viruses - 3; Other Eukaryotes - 3698 (source: NCBI BLink). & (p20306|adh1_orysa : 244.0) Alcohol dehydrogenase 1 (EC 1.1.1.1) - Oryza sativa (Rice) & (reliability: 488.0) &  (original description: no original description)","protein_coding"
"PSME_00043776-RA","No alias","Pseudotsuga menziesii","(at1g17100 : 205.0) SOUL heme-binding family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: SOUL haem-binding protein (InterPro:IPR006917); BEST Arabidopsis thaliana protein match is: SOUL heme-binding family protein (TAIR:AT1G78450.1); Has 1318 Blast hits to 1294 proteins in 131 species: Archae - 15; Bacteria - 114; Metazoa - 250; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 733 (source: NCBI BLink). & (reliability: 410.0) &  (original description: no original description)","protein_coding"
"PSME_00043918-RA","No alias","Pseudotsuga menziesii","(at1g29900 : 142.0) carbamoyl phosphate synthetase large chain (CARB) mRNA,; carbamoyl phosphate synthetase B (CARB); FUNCTIONS IN: catalytic activity, ATP binding; INVOLVED IN: cellular response to phosphate starvation, arginine biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbamoyl phosphate synthase, large subunit, N-terminal (InterPro:IPR005481), Carbamoyl phosphate synthetase, large subunit, ATP-binding (InterPro:IPR005479), MGS-like (InterPro:IPR011607), PreATP-grasp-like fold (InterPro:IPR016185), Carbamoyl phosphate synthetase, large subunit, oligomerisation (InterPro:IPR005480), Carbamoyl phosphate synthase, large subunit, glutamine-dependent (InterPro:IPR006275), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Carbamoyl phosphate synthase, large subunit (InterPro:IPR005483), Pre-ATP-grasp fold (InterPro:IPR013817); BEST Arabidopsis thaliana protein match is: acetyl-CoA carboxylase 2 (TAIR:AT1G36180.1); Has 49576 Blast hits to 29968 proteins in 5011 species: Archae - 665; Bacteria - 22536; Metazoa - 6475; Fungi - 1021; Plants - 476; Viruses - 0; Other Eukaryotes - 18403 (source: NCBI BLink). & (reliability: 284.0) &  (original description: no original description)","protein_coding"
"PSME_00044183-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00044478-RA","No alias","Pseudotsuga menziesii","(at2g39980 : 335.0) HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: response to karrikin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G01210.1); Has 2459 Blast hits to 2362 proteins in 147 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 105; Plants - 2350; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (o24645|hcbt1_diaca : 144.0) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144) (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) - Dianthus caryophyllus (Carnation) (Clove pink) & (reliability: 648.0) &  (original description: no original description)","protein_coding"
"PSME_00044509-RA","No alias","Pseudotsuga menziesii",""(at1g01280 : 223.0) member of CYP703A  CYP703A2 is expressed specifically in anthers of land plants, catalyzing the in-chain hydroxylation at the C-7 position of medium-chain saturated fatty acids (lauric acid in-chain hydroxylase) which is involved in pollen development (sporopollenin synthesis).; ""cytochrome P450, family 703, subfamily A, polypeptide 2"" (CYP703A2); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen, oxygen binding; INVOLVED IN: medium-chain fatty acid metabolic process, pollen wall assembly, medium-chain fatty acid biosynthetic process, sporopollenin biosynthetic process, pollen exine formation; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G07990.1); Has 29652 Blast hits to 29399 proteins in 1569 species: Archae - 44; Bacteria - 2451; Metazoa - 11172; Fungi - 6019; Plants - 9091; Viruses - 3; Other Eukaryotes - 872 (source: NCBI BLink). & (o48956|c98a1_sorbi : 205.0) Cytochrome P450 98A1 (EC 1.14.-.-) - Sorghum bicolor (Sorghum) (Sorghum vulgare) & (reliability: 406.0) &  (original description: no original description)"","protein_coding"
"PSME_00044541-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00045249-RA","No alias","Pseudotsuga menziesii","(at1g14685 : 185.0) Arabidopsis GBP Basic Penta Cysteine 1; basic pentacysteine 2 (BPC2); CONTAINS InterPro DOMAIN/s: GAGA binding-like (InterPro:IPR010409); BEST Arabidopsis thaliana protein match is: basic pentacysteine1 (TAIR:AT2G01930.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 370.0) &  (original description: no original description)","protein_coding"
"PSME_00045482-RA","No alias","Pseudotsuga menziesii","(at3g14740 : 243.0) RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: homologue of trithorax (TAIR:AT2G31650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 486.0) &  (original description: no original description)","protein_coding"
"PSME_00045558-RA","No alias","Pseudotsuga menziesii","(at4g37530 : 427.0) Peroxidase superfamily protein; FUNCTIONS IN: protein binding, peroxidase activity; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT4G37520.1); Has 4481 Blast hits to 4468 proteins in 296 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 180; Plants - 4223; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink). & (p22195|per1_arahy : 252.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (reliability: 854.0) &  (original description: no original description)","protein_coding"
"PSME_00045594-RA","No alias","Pseudotsuga menziesii","(at3g02820 : 164.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: cell cycle, replication fork protection, response to DNA damage stimulus; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Replication fork protection component Swi3 (InterPro:IPR012923), Zinc finger, CCHC-type (InterPro:IPR001878); Has 415 Blast hits to 415 proteins in 134 species: Archae - 0; Bacteria - 4; Metazoa - 156; Fungi - 94; Plants - 93; Viruses - 28; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 328.0) &  (original description: no original description)","protein_coding"
"PSME_00045928-RA","No alias","Pseudotsuga menziesii","(at4g34990 : 238.0) Member of the R2R3 factor gene family.; myb domain protein 32 (MYB32); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 7 (TAIR:AT2G16720.1); Has 9023 Blast hits to 8385 proteins in 476 species: Archae - 0; Bacteria - 0; Metazoa - 680; Fungi - 473; Plants - 6077; Viruses - 3; Other Eukaryotes - 1790 (source: NCBI BLink). & (p20025|myb38_maize : 238.0) Myb-related protein Zm38 - Zea mays (Maize) & (reliability: 476.0) &  (original description: no original description)","protein_coding"
"PSME_00045971-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00046145-RA","No alias","Pseudotsuga menziesii","(at3g48090 : 94.0) Component of R gene-mediated disease resistance in Arabidopsis thaliana with homology to eukaryotic lipases.; enhanced disease susceptibility 1 (EDS1); CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G48080.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 181.8) &  (original description: no original description)","protein_coding"
"PSME_00046184-RA","No alias","Pseudotsuga menziesii","(at5g09430 : 308.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G39955.1); Has 8280 Blast hits to 8277 proteins in 1491 species: Archae - 97; Bacteria - 6100; Metazoa - 351; Fungi - 79; Plants - 382; Viruses - 0; Other Eukaryotes - 1271 (source: NCBI BLink). & (reliability: 616.0) &  (original description: no original description)","protein_coding"
"PSME_00046278-RA","No alias","Pseudotsuga menziesii","(at1g44750 : 341.0) Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.; purine permease 11 (PUP11); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Drug/metabolite transporter superfamily protein (TAIR:AT4G08700.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 682.0) &  (original description: no original description)","protein_coding"
"PSME_00046294-RA","No alias","Pseudotsuga menziesii","(at2g30870 : 207.0) early dehydration-induced gene ERD13 homologous to tobacco and maize glutathione S-transferases.  Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002); glutathione S-transferase PHI 10 (GSTF10); FUNCTIONS IN: glutathione transferase activity, copper ion binding, glutathione binding; INVOLVED IN: response to cadmium ion, response to water deprivation, toxin catabolic process; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase PHI 9 (TAIR:AT2G30860.1); Has 19000 Blast hits to 18970 proteins in 1605 species: Archae - 0; Bacteria - 10344; Metazoa - 2591; Fungi - 970; Plants - 1495; Viruses - 0; Other Eukaryotes - 3600 (source: NCBI BLink). & (p04907|gstf3_maize : 181.0) Glutathione S-transferase III (EC 2.5.1.18) (GST-III) (GST class-phi) - Zea mays (Maize) & (reliability: 414.0) &  (original description: no original description)","protein_coding"
"PSME_00046729-RA","No alias","Pseudotsuga menziesii","(at1g53860 : 171.0) Remorin family protein; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT1G30320.1); Has 458 Blast hits to 455 proteins in 58 species: Archae - 2; Bacteria - 9; Metazoa - 29; Fungi - 14; Plants - 379; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 342.0) &  (original description: no original description)","protein_coding"
"PSME_00047099-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00047137-RA","No alias","Pseudotsuga menziesii","(q10710|sta_ricco : 214.0) Sugar carrier protein A - Ricinus communis (Castor bean) & (at4g02050 : 210.0) sugar transporter protein 7 (STP7); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G26340.1); Has 26348 Blast hits to 25870 proteins in 1897 species: Archae - 376; Bacteria - 11847; Metazoa - 3711; Fungi - 6732; Plants - 2516; Viruses - 0; Other Eukaryotes - 1166 (source: NCBI BLink). & (reliability: 420.0) &  (original description: no original description)","protein_coding"
"PSME_00047362-RA","No alias","Pseudotsuga menziesii","(at1g48050 : 157.0) Ku80 and ku70 form the heterodimer complex Ku, required for proper maintenance of  the telomeric C strand. Ku regulates the extension of the telomeric G strand. Interacts with WEX, and this interaction stimulates the WEX exonuclease activity. Binds double stranded DNA breaks as a heterodimer with Ku70, involved in non-homologous end joining repair. Mutants are defective in T-DNA integration. Over expression confers increased resistance to DNA damage agents and increased susceptibility to T-DNA transformation.; KU80; FUNCTIONS IN: double-stranded DNA binding, protein binding; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ku70/Ku80, N-terminal alpha/beta (InterPro:IPR005161), DNA helicase, ATP-dependent, Ku type (InterPro:IPR006164), Spen Paralogue and Orthologue SPOC, C-terminal-like (InterPro:IPR016194), Ku70/Ku80 C-terminal arm (InterPro:IPR005160), Ku, C-terminal (InterPro:IPR014893); Has 786 Blast hits to 750 proteins in 217 species: Archae - 0; Bacteria - 40; Metazoa - 246; Fungi - 345; Plants - 62; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (reliability: 314.0) &  (original description: no original description)","protein_coding"
"PSME_00047413-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00047561-RA","No alias","Pseudotsuga menziesii","(at2g36870 : 281.0) xyloglucan endotransglucosylase/hydrolase 32 (XTH32); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endo-transglycosylase-related 8 (TAIR:AT3G44990.1). & (q39857|xth_soybn : 176.0) Probable xyloglucan endotransglucosylase/hydrolase precursor (EC 2.4.1.207) (Fragment) - Glycine max (Soybean) & (reliability: 562.0) &  (original description: no original description)","protein_coding"
"PSME_00047785-RA","No alias","Pseudotsuga menziesii","(at3g53230 : 494.0) ATPase, AAA-type, CDC48 protein; FUNCTIONS IN: hydrolase activity, nucleoside-triphosphatase activity, binding, nucleotide binding, ATP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: cytosol, nucleolus, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Aspartate decarboxylase-like fold (InterPro:IPR009010), Cell division protein 48, CDC48, domain 2 (InterPro:IPR004201), ATPase, AAA-type, VAT, N-terminal (InterPro:IPR003338), ATPase, AAA-type, CDC48 (InterPro:IPR005938); BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein (TAIR:AT5G03340.1); Has 66274 Blast hits to 38860 proteins in 3301 species: Archae - 1748; Bacteria - 29009; Metazoa - 8678; Fungi - 6310; Plants - 5885; Viruses - 85; Other Eukaryotes - 14559 (source: NCBI BLink). & (q96372|cdc48_capan : 483.0) Cell division cycle protein 48 homolog - Capsicum annuum (Bell pepper) & (reliability: 988.0) &  (original description: no original description)","protein_coding"
"PSME_00047914-RA","No alias","Pseudotsuga menziesii","(at2g19330 : 245.0) Encodes PIRL6, a member of the Plant Intracellular Ras-group-related LRRs (Leucine rich repeat proteins). PIRLs are a distinct, plant-specific class of intracellular LRRs that likely mediate protein interactions, possibly in the context of signal transduction.; plant intracellular ras group-related LRR 6 (PIRL6); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: plant intracellular ras group-related LRR 7 (TAIR:AT4G29880.1); Has 63918 Blast hits to 28732 proteins in 1043 species: Archae - 35; Bacteria - 6419; Metazoa - 27911; Fungi - 2141; Plants - 23572; Viruses - 21; Other Eukaryotes - 3819 (source: NCBI BLink). & (reliability: 470.0) &  (original description: no original description)","protein_coding"
"PSME_00047920-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00048074-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00048129-RA","No alias","Pseudotsuga menziesii","(at2g27610 : 99.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G13650.1); Has 54594 Blast hits to 14874 proteins in 305 species: Archae - 2; Bacteria - 30; Metazoa - 158; Fungi - 263; Plants - 53396; Viruses - 0; Other Eukaryotes - 745 (source: NCBI BLink). & (reliability: 198.0) &  (original description: no original description)","protein_coding"
"PSME_00048312-RA","No alias","Pseudotsuga menziesii","(at5g03760 : 197.0) encodes a beta-mannan synthase that is required for agrobacterium-mediated plant genetic transformation involves a complex interaction between the bacterium and the host plant. 3' UTR is involved in transcriptional regulation and the gene is expressed in the elongation zone of the root.; ATCSLA09; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: cellulose synthase-like A02 (TAIR:AT5G22740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 394.0) &  (original description: no original description)","protein_coding"
"PSME_00048340-RA","No alias","Pseudotsuga menziesii","(at3g02820 : 131.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: cell cycle, replication fork protection, response to DNA damage stimulus; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Replication fork protection component Swi3 (InterPro:IPR012923), Zinc finger, CCHC-type (InterPro:IPR001878); Has 415 Blast hits to 415 proteins in 134 species: Archae - 0; Bacteria - 4; Metazoa - 156; Fungi - 94; Plants - 93; Viruses - 28; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 262.0) &  (original description: no original description)","protein_coding"
"PSME_00048500-RA","No alias","Pseudotsuga menziesii","(at4g36360 : 100.0) putative beta-galactosidase (BGAL3 gene); beta-galactosidase 3 (BGAL3); FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta galactosidase 1 (TAIR:AT3G13750.1); Has 2405 Blast hits to 2192 proteins in 479 species: Archae - 15; Bacteria - 1021; Metazoa - 436; Fungi - 211; Plants - 628; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (p45582|bgal_aspof : 93.2) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) & (reliability: 200.0) &  (original description: no original description)","protein_coding"
"PSME_00048506-RA","No alias","Pseudotsuga menziesii","(at2g44745 : 162.0) WRKY family transcription factor; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 13 (TAIR:AT4G39410.1); Has 3506 Blast hits to 3049 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3483; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 324.0) &  (original description: no original description)","protein_coding"
"PSME_00048536-RA","No alias","Pseudotsuga menziesii","(at3g22470 : 147.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G12300.1); Has 71386 Blast hits to 15586 proteins in 313 species: Archae - 4; Bacteria - 76; Metazoa - 1075; Fungi - 1368; Plants - 66381; Viruses - 0; Other Eukaryotes - 2482 (source: NCBI BLink). & (q76c99|rf1_orysa : 131.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 278.0) &  (original description: no original description)","protein_coding"
"PSME_00048562-RA","No alias","Pseudotsuga menziesii","(at5g51890 : 405.0) encodes peroxidase involved in the lignification of tracheary elements (TE) in roots; Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G42180.1); Has 4522 Blast hits to 4498 proteins in 281 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 153; Plants - 4313; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink). & (p22196|per2_arahy : 268.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 810.0) &  (original description: no original description)","protein_coding"
"PSME_00048656-RA","No alias","Pseudotsuga menziesii","(at1g06840 : 134.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G01950.1); Has 194453 Blast hits to 138780 proteins in 4845 species: Archae - 155; Bacteria - 17954; Metazoa - 60073; Fungi - 10970; Plants - 82493; Viruses - 385; Other Eukaryotes - 22423 (source: NCBI BLink). & (reliability: 268.0) &  (original description: no original description)","protein_coding"
"PSME_00048745-RA","No alias","Pseudotsuga menziesii","(at5g14230 : 508.0) CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 ortholog 2 in Arabidopsis thaliana (TAIR:AT5G57740.1); Has 66374 Blast hits to 25358 proteins in 1201 species: Archae - 121; Bacteria - 8133; Metazoa - 29530; Fungi - 5885; Plants - 3349; Viruses - 785; Other Eukaryotes - 18571 (source: NCBI BLink). & (reliability: 1016.0) &  (original description: no original description)","protein_coding"
"PSME_00048855-RA","No alias","Pseudotsuga menziesii","(at1g15340 : 103.0) Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.; methyl-CPG-binding domain 10 (MBD10); FUNCTIONS IN: methyl-CpG binding, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Methyl-CpG DNA binding (InterPro:IPR001739); BEST Arabidopsis thaliana protein match is: methyl-CPG-binding domain 11 (TAIR:AT3G15790.1). & (reliability: 206.0) &  (original description: no original description)","protein_coding"
"PSME_00049203-RA","No alias","Pseudotsuga menziesii","(at3g17630 : 253.0) member of Putative Na+/H+ antiporter family; cation/H+ exchanger 19 (CHX19); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 18 (TAIR:AT5G41610.1); Has 10353 Blast hits to 10313 proteins in 2156 species: Archae - 388; Bacteria - 8084; Metazoa - 59; Fungi - 214; Plants - 674; Viruses - 0; Other Eukaryotes - 934 (source: NCBI BLink). & (reliability: 506.0) &  (original description: no original description)","protein_coding"
"PSME_00049255-RA","No alias","Pseudotsuga menziesii","(at1g69550 : 229.0) disease resistance protein (TIR-NBS-LRR class); FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane, endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 8455 Blast hits to 8197 proteins in 261 species: Archae - 0; Bacteria - 113; Metazoa - 3; Fungi - 4; Plants - 8303; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (p93194|rpk1_iponi : 89.7) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 458.0) &  (original description: no original description)","protein_coding"
"PSME_00049374-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00049510-RA","No alias","Pseudotsuga menziesii","(at1g60160 : 288.0) Potassium transporter family protein; FUNCTIONS IN: potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Potassium uptake protein, kup (InterPro:IPR018519), K+ potassium transporter (InterPro:IPR003855); BEST Arabidopsis thaliana protein match is: K+ uptake permease 7 (TAIR:AT5G09400.1); Has 3447 Blast hits to 3411 proteins in 1044 species: Archae - 13; Bacteria - 2434; Metazoa - 1; Fungi - 101; Plants - 776; Viruses - 4; Other Eukaryotes - 118 (source: NCBI BLink). & (q69ri8|hak14_orysa : 257.0) Probable potassium transporter 14 (OsHAK14) - Oryza sativa (Rice) & (reliability: 576.0) &  (original description: no original description)","protein_coding"
"PSME_00049547-RA","No alias","Pseudotsuga menziesii","(at3g13100 : 187.0) member of MRP subfamily; multidrug resistance-associated protein 7 (MRP7); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: response to other organism; LOCATED IN: plasma membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 8 (TAIR:AT3G13090.1); Has 650648 Blast hits to 350565 proteins in 4050 species: Archae - 11697; Bacteria - 531445; Metazoa - 11792; Fungi - 6984; Plants - 5983; Viruses - 13; Other Eukaryotes - 82734 (source: NCBI BLink). & (reliability: 374.0) &  (original description: no original description)","protein_coding"
"PSME_00049603-RA","No alias","Pseudotsuga menziesii","(at3g02820 : 153.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: cell cycle, replication fork protection, response to DNA damage stimulus; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Replication fork protection component Swi3 (InterPro:IPR012923), Zinc finger, CCHC-type (InterPro:IPR001878); Has 415 Blast hits to 415 proteins in 134 species: Archae - 0; Bacteria - 4; Metazoa - 156; Fungi - 94; Plants - 93; Viruses - 28; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 306.0) &  (original description: no original description)","protein_coding"
"PSME_00049606-RA","No alias","Pseudotsuga menziesii","(at3g02820 : 161.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: cell cycle, replication fork protection, response to DNA damage stimulus; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Replication fork protection component Swi3 (InterPro:IPR012923), Zinc finger, CCHC-type (InterPro:IPR001878); Has 415 Blast hits to 415 proteins in 134 species: Archae - 0; Bacteria - 4; Metazoa - 156; Fungi - 94; Plants - 93; Viruses - 28; Other Eukaryotes - 40 (source: NCBI BLink). & (reliability: 322.0) &  (original description: no original description)","protein_coding"
"PSME_00049651-RA","No alias","Pseudotsuga menziesii","(at1g60420 : 171.0) Reduce transmission through pollen.; DC1 domain-containing protein; FUNCTIONS IN: oxidoreductase activity, antioxidant activity; INVOLVED IN: response to cadmium ion, pollen tube growth, pollen tube guidance; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), C1-like (InterPro:IPR011424), Thioredoxin, conserved site (InterPro:IPR017937); BEST Arabidopsis thaliana protein match is: protein kinase C-like zinc finger protein (TAIR:AT4G31240.2); Has 6688 Blast hits to 3903 proteins in 794 species: Archae - 4; Bacteria - 4185; Metazoa - 634; Fungi - 4; Plants - 553; Viruses - 0; Other Eukaryotes - 1308 (source: NCBI BLink). & (reliability: 342.0) &  (original description: no original description)","protein_coding"
"PSME_00049666-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00050012-RA","No alias","Pseudotsuga menziesii","(at5g65560 : 311.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G77340.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 288.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 590.0) &  (original description: no original description)","protein_coding"
"PSME_00050605-RA","No alias","Pseudotsuga menziesii","(at2g40610 : 384.0) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio).  Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.; expansin A8 (EXPA8); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, syncytium formation, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Pollen allergen/expansin, C-terminal (InterPro:IPR007117), Barwin-related endoglucanase (InterPro:IPR009009), Expansin (InterPro:IPR002963), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: expansin A2 (TAIR:AT5G05290.1); Has 2297 Blast hits to 2294 proteins in 186 species: Archae - 0; Bacteria - 19; Metazoa - 0; Fungi - 45; Plants - 2187; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (p93442|expa4_orysa : 376.0) Expansin-A4 precursor (OsEXPA4) (Alpha-expansin-4) (OsEXP4) (OsaEXPa1.22) - Oryza sativa (Rice) & (reliability: 768.0) &  (original description: no original description)","protein_coding"
"PSME_00050705-RA","No alias","Pseudotsuga menziesii","(at2g22420 : 231.0) Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G19890.1); Has 4727 Blast hits to 4701 proteins in 310 species: Archae - 0; Bacteria - 4; Metazoa - 10; Fungi - 328; Plants - 4313; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink). & (p22195|per1_arahy : 174.0) Cationic peroxidase 1 precursor (EC 1.11.1.7) (PNPC1) - Arachis hypogaea (Peanut) & (reliability: 462.0) &  (original description: no original description)","protein_coding"
"PSME_00050888-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00051088-RA","No alias","Pseudotsuga menziesii","(at2g39900 : 122.0) GATA type zinc finger transcription factor family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT3G55770.5); Has 4468 Blast hits to 3092 proteins in 184 species: Archae - 0; Bacteria - 0; Metazoa - 3526; Fungi - 76; Plants - 531; Viruses - 0; Other Eukaryotes - 335 (source: NCBI BLink). & (p29675|sf3_helan : 81.3) Pollen-specific protein SF3 - Helianthus annuus (Common sunflower) & (reliability: 244.0) &  (original description: no original description)","protein_coding"
"PSME_00051188-RA","No alias","Pseudotsuga menziesii","(at1g22400 : 405.0) UGT85A1; FUNCTIONS IN: in 6 functions; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A3 (TAIR:AT1G22380.1); Has 7940 Blast hits to 7832 proteins in 421 species: Archae - 0; Bacteria - 227; Metazoa - 2330; Fungi - 36; Plants - 5216; Viruses - 60; Other Eukaryotes - 71 (source: NCBI BLink). & (p56725|zox_phavu : 178.0) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin O-beta-D-xylosyltransferase) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 810.0) &  (original description: no original description)","protein_coding"
"PSME_00051415-RA","No alias","Pseudotsuga menziesii","(at4g00560 : 196.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: dTDP-4-dehydrorhamnose reductase activity, binding, catalytic activity; INVOLVED IN: extracellular polysaccharide biosynthetic process, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), dTDP-4-dehydrorhamnose reductase (InterPro:IPR005913). & (reliability: 392.0) &  (original description: no original description)","protein_coding"
"PSME_00051753-RA","No alias","Pseudotsuga menziesii","(at5g09810 : 268.0) Member of Actin gene family.Mutants are defective in germination and root growth.; actin 7 (ACT7); FUNCTIONS IN: protein binding, structural constituent of cytoskeleton; INVOLVED IN: in 9 processes; LOCATED IN: mitochondrion, nucleolus, cell wall, cytoskeleton, plasma membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 3 (TAIR:AT3G53750.1); Has 15241 Blast hits to 14839 proteins in 3047 species: Archae - 8; Bacteria - 21; Metazoa - 5732; Fungi - 5247; Plants - 1603; Viruses - 2; Other Eukaryotes - 2628 (source: NCBI BLink). & (p20904|act_volca : 267.0) Actin - Volvox carteri & (reliability: 536.0) &  (original description: no original description)","protein_coding"
"PSME_00051792-RA","No alias","Pseudotsuga menziesii","(at5g62230 : 110.0) Encodes a receptor-like kinase that, together with ER and ERL2 governs the initial decision of protodermal cells to either divide proliferatively to produce pavement cells or divide asymmetrically to generate stomatal complexes. It is important for maintaining stomatal stem cell activity and preventing terminal differentiation of the meristemoid into the guard mother cell. Along with erl2 functionally compensates for loss of erecta during integument development.; ERECTA-like 1 (ERL1); FUNCTIONS IN: kinase activity; INVOLVED IN: stomatal complex morphogenesis, embryo sac development, ovule development; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: ERECTA-like 2 (TAIR:AT5G07180.1). & (reliability: 220.0) &  (original description: no original description)","protein_coding"
"PSME_00051913-RA","No alias","Pseudotsuga menziesii","(at5g06050 : 133.0) Putative methyltransferase family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT2G39750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 266.0) &  (original description: no original description)","protein_coding"
"PSME_00052080-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00052149-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00052386-RA","No alias","Pseudotsuga menziesii","(at1g79710 : 164.0) Major facilitator superfamily protein; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily, general substrate transporter (InterPro:IPR016196), Biopterin transport-related protein BT1 (InterPro:IPR004324); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G25050.1); Has 1010 Blast hits to 995 proteins in 167 species: Archae - 4; Bacteria - 188; Metazoa - 0; Fungi - 6; Plants - 265; Viruses - 0; Other Eukaryotes - 547 (source: NCBI BLink). & (reliability: 328.0) &  (original description: no original description)","protein_coding"
"PSME_00052451-RA","No alias","Pseudotsuga menziesii","(at1g03990 : 391.0) Long-chain fatty alcohol dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, oxidoreductase activity, acting on CH-OH group of donors, FAD binding; CONTAINS InterPro DOMAIN/s: Glucose-methanol-choline oxidoreductase, N-terminal (InterPro:IPR000172), Glucose-methanol-choline oxidoreductase, C-terminal (InterPro:IPR007867), Long-chain fatty alcohol dehydrogenase (InterPro:IPR012400); BEST Arabidopsis thaliana protein match is: Long-chain fatty alcohol dehydrogenase family protein (TAIR:AT4G28570.1); Has 3131 Blast hits to 2994 proteins in 799 species: Archae - 23; Bacteria - 2103; Metazoa - 14; Fungi - 174; Plants - 167; Viruses - 0; Other Eukaryotes - 650 (source: NCBI BLink). & (reliability: 776.0) &  (original description: no original description)","protein_coding"
"PSME_00052695-RA","No alias","Pseudotsuga menziesii","(at1g61065 : 146.0) Protein of unknown function (DUF1218); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1218 (InterPro:IPR009606); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1218) (TAIR:AT4G27435.1); Has 557 Blast hits to 557 proteins in 98 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 557; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 292.0) &  (original description: no original description)","protein_coding"
"PSME_00052916-RA","No alias","Pseudotsuga menziesii","(at2g47980 : 447.0) Essential to the monopolar orientation of the kinetochores during meiosis.; sister-chromatid cohesion protein 3 (SCC3); FUNCTIONS IN: binding; INVOLVED IN: mitosis, attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation, meiotic sister chromatid cohesion, centromeric; LOCATED IN: chromosome, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024), STAG (InterPro:IPR013721), Stromalin conservative domain (InterPro:IPR020839); Has 568 Blast hits to 559 proteins in 184 species: Archae - 0; Bacteria - 2; Metazoa - 324; Fungi - 134; Plants - 52; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). & (reliability: 894.0) &  (original description: no original description)","protein_coding"
"PSME_00053162-RA","No alias","Pseudotsuga menziesii","(at3g08500 : 174.0) Encodes a putative R2R3-type MYB transcription factor (MYB83).; myb domain protein 83 (MYB83); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 46 (TAIR:AT5G12870.1); Has 9098 Blast hits to 8506 proteins in 552 species: Archae - 0; Bacteria - 0; Metazoa - 787; Fungi - 464; Plants - 5991; Viruses - 4; Other Eukaryotes - 1852 (source: NCBI BLink). & (p20027|myb3_horvu : 164.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (reliability: 348.0) &  (original description: no original description)","protein_coding"
"PSME_00053636-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00053711-RA","No alias","Pseudotsuga menziesii","(at5g65650 : 153.0) Protein of unknown function (DUF1195); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1195 (InterPro:IPR010608); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1195) (TAIR:AT4G36660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 306.0) &  (original description: no original description)","protein_coding"
"PSME_00053746-RA","No alias","Pseudotsuga menziesii","(at1g07900 : 130.0) LOB domain-containing protein 1 (LBD1); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 11 (TAIR:AT2G28500.1); Has 1035 Blast hits to 1030 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1035; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 260.0) &  (original description: no original description)","protein_coding"
"PSME_00053948-RA","No alias","Pseudotsuga menziesii","(at2g39210 : 468.0) Major facilitator superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transmembrane transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nodulin-like (InterPro:IPR010658), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G28120.1); Has 3072 Blast hits to 2927 proteins in 685 species: Archae - 32; Bacteria - 1223; Metazoa - 36; Fungi - 288; Plants - 601; Viruses - 0; Other Eukaryotes - 892 (source: NCBI BLink). & (reliability: 936.0) &  (original description: no original description)","protein_coding"
"PSME_00054110-RA","No alias","Pseudotsuga menziesii","(at2g28080 : 303.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36970.1); Has 5722 Blast hits to 5664 proteins in 294 species: Archae - 0; Bacteria - 48; Metazoa - 520; Fungi - 23; Plants - 5076; Viruses - 28; Other Eukaryotes - 27 (source: NCBI BLink). & (q41819|iaag_maize : 204.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (reliability: 606.0) &  (original description: no original description)","protein_coding"
"PSME_00054361-RA","No alias","Pseudotsuga menziesii","(at2g28080 : 404.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36970.1); Has 5722 Blast hits to 5664 proteins in 294 species: Archae - 0; Bacteria - 48; Metazoa - 520; Fungi - 23; Plants - 5076; Viruses - 28; Other Eukaryotes - 27 (source: NCBI BLink). & (q41819|iaag_maize : 212.0) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121) (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) - Zea mays (Maize) & (reliability: 808.0) &  (original description: no original description)","protein_coding"
"PSME_00054522-RA","No alias","Pseudotsuga menziesii",""(at1g56170 : 116.0) Encodes a protein with similarity to a subunit of  the CCAAT promoter motif binding complex of yeast.One of two members of this class (HAP5B) and expressed in vegetative and reproductive tissues; ""nuclear factor Y, subunit C2"" (NF-YC2); CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit C9 (TAIR:AT1G08970.2); Has 1485 Blast hits to 1485 proteins in 232 species: Archae - 0; Bacteria - 0; Metazoa - 583; Fungi - 338; Plants - 429; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (reliability: 232.0) &  (original description: no original description)"","protein_coding"
"PSME_00054820-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00054961-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00054987-RA","No alias","Pseudotsuga menziesii","(at4g10955 : 287.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G05260.1). & (reliability: 574.0) &  (original description: no original description)","protein_coding"
"PSME_00055238-RA","No alias","Pseudotsuga menziesii","(at1g26850 : 332.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; LOCATED IN: Golgi apparatus, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G18030.1); Has 1039 Blast hits to 1012 proteins in 98 species: Archae - 0; Bacteria - 124; Metazoa - 0; Fungi - 0; Plants - 910; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 664.0) &  (original description: no original description)","protein_coding"
"PSME_00055275-RA","No alias","Pseudotsuga menziesii","(q41741|if4a_maize : 431.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Zea mays (Maize) & (at1g72730 : 427.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, plasma membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 4A1 (TAIR:AT3G13920.1); Has 48726 Blast hits to 48144 proteins in 3104 species: Archae - 749; Bacteria - 26664; Metazoa - 6044; Fungi - 4769; Plants - 2616; Viruses - 17; Other Eukaryotes - 7867 (source: NCBI BLink). & (reliability: 854.0) &  (original description: no original description)","protein_coding"
"PSME_00055496-RA","No alias","Pseudotsuga menziesii","(at5g01650 : 142.0) Tautomerase/MIF superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: inflammatory response, response to other organism; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tautomerase (InterPro:IPR014347), Macrophage migration inhibitory factor (InterPro:IPR001398); BEST Arabidopsis thaliana protein match is: Tautomerase/MIF superfamily protein (TAIR:AT5G57170.2); Has 820 Blast hits to 820 proteins in 207 species: Archae - 0; Bacteria - 141; Metazoa - 384; Fungi - 26; Plants - 141; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (reliability: 284.0) &  (original description: no original description)","protein_coding"
"PSME_00055588-RA","No alias","Pseudotsuga menziesii","(at1g69550 : 207.0) disease resistance protein (TIR-NBS-LRR class); FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane, endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 8455 Blast hits to 8197 proteins in 261 species: Archae - 0; Bacteria - 113; Metazoa - 3; Fungi - 4; Plants - 8303; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 414.0) &  (original description: no original description)","protein_coding"
"PSME_00055628-RA","No alias","Pseudotsuga menziesii","(at3g22470 : 266.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G12300.1); Has 71386 Blast hits to 15586 proteins in 313 species: Archae - 4; Bacteria - 76; Metazoa - 1075; Fungi - 1368; Plants - 66381; Viruses - 0; Other Eukaryotes - 2482 (source: NCBI BLink). & (q76c99|rf1_orysa : 231.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 530.0) &  (original description: no original description)","protein_coding"
"PSME_00055681-RA","No alias","Pseudotsuga menziesii","(at2g40760 : 261.0) Rhodanese/Cell cycle control phosphatase superfamily protein; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G09280.1); Has 5729 Blast hits to 5726 proteins in 1464 species: Archae - 2; Bacteria - 2945; Metazoa - 57; Fungi - 3; Plants - 114; Viruses - 0; Other Eukaryotes - 2608 (source: NCBI BLink). & (reliability: 522.0) &  (original description: no original description)","protein_coding"
"PSME_00055709-RA","No alias","Pseudotsuga menziesii","(at5g42610 : 202.0) Protein of unknown function (DUF607); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF607 (InterPro:IPR006769); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF607) (TAIR:AT2G23790.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 404.0) &  (original description: no original description)","protein_coding"
"PSME_00055756-RA","No alias","Pseudotsuga menziesii","(at3g23920 : 272.0) Encodes a chloroplast beta-amylase. Is necessary for leaf starch breakdown in the absence of BAM3.; beta-amylase 1 (BAM1); FUNCTIONS IN: beta-amylase activity; INVOLVED IN: response to water deprivation, starch catabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 14, conserved site (InterPro:IPR018238), Glycoside hydrolase, family 14 (InterPro:IPR001554), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 14B, plant (InterPro:IPR001371), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: chloroplast beta-amylase (TAIR:AT4G17090.1); Has 845 Blast hits to 843 proteins in 168 species: Archae - 0; Bacteria - 89; Metazoa - 0; Fungi - 0; Plants - 691; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (p10538|amyb_soybn : 180.0) Beta-amylase (EC 3.2.1.2) (1,4-alpha-D-glucan maltohydrolase) - Glycine max (Soybean) & (reliability: 544.0) &  (original description: no original description)","protein_coding"
"PSME_00055880-RA","No alias","Pseudotsuga menziesii","(at5g07990 : 253.0) Required for flavonoid 3' hydroxylase activity.; TRANSPARENT TESTA 7 (TT7); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 35179 Blast hits to 34934 proteins in 1774 species: Archae - 51; Bacteria - 4733; Metazoa - 12156; Fungi - 7299; Plants - 9637; Viruses - 3; Other Eukaryotes - 1300 (source: NCBI BLink). & (q9sbq9|f3ph_pethy : 253.0) Flavonoid 3'-monooxygenase (EC 1.14.13.21) (Flavonoid 3'-hydroxylase) (Cytochrome P450 75B2) - Petunia hybrida (Petunia) & (reliability: 474.0) &  (original description: no original description)","protein_coding"
"PSME_00055903-RA","No alias","Pseudotsuga menziesii","(at4g19150 : 198.0) Ankyrin repeat family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT3G09890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 396.0) &  (original description: no original description)","protein_coding"
"PSME_00056786-RA","No alias","Pseudotsuga menziesii","(at1g26760 : 191.0) SET domain protein 35 (SDG35); FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: SET domain group 37 (TAIR:AT2G17900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 382.0) &  (original description: no original description)","protein_coding"
"Seita.1G327700.1","No alias","Setaria italica ","regulatory protein *(CYCD) of cell cycle","protein_coding"
"Seita.1G352100.1","No alias","Setaria italica ","component *(MCM5) of MCM replicative DNA helicase complex","protein_coding"
"Seita.1G356900.1","No alias","Setaria italica ","sliding clamp protein *(PCNA)","protein_coding"
"Seita.1G376600.1","No alias","Setaria italica ","component *(RPA2) of RPA presynaptic filament assembly factor complex & component *(RPA2) of single-stranded-DNA binding RPA complex","protein_coding"
"Seita.2G137400.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G181900.1","No alias","Setaria italica ","component *(eL19) of large ribosomal-subunit (LSU) proteome","protein_coding"
"Seita.2G386600.1","No alias","Setaria italica ","component *(eEF1B-beta/-delta) of eEF1B eEF1A-GDP-recycling complex","protein_coding"
"Seita.3G082800.1","No alias","Setaria italica ","component *(MCM6) of MCM replicative DNA helicase complex","protein_coding"
"Seita.3G205800.1","No alias","Setaria italica ","component *(MCM3) of MCM replicative DNA helicase complex","protein_coding"
"Seita.3G270900.1","No alias","Setaria italica ","RNA splicing factor *(SR30/34)","protein_coding"
"Seita.3G306100.1","No alias","Setaria italica ","EC_4.2 carbon-oxygen lyase & enolase","protein_coding"
"Seita.3G335500.1","No alias","Setaria italica ","component *(MCM7) of MCM replicative DNA helicase complex","protein_coding"
"Seita.3G405100.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.4G012100.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.4G045900.1","No alias","Setaria italica ","component *(ORC1) of origin recognition complex","protein_coding"
"Seita.4G072100.1","No alias","Setaria italica ","profilin actin nucleation protein","protein_coding"
"Seita.4G100200.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.4G267000.1","No alias","Setaria italica ","SSU processome assembly factor *(UTP18)","protein_coding"
"Seita.4G289200.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G093900.1","No alias","Setaria italica ","LRK10-1-like protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.5G175100.1","No alias","Setaria italica ","CAPE precursor polypeptide","protein_coding"
"Seita.5G192100.1","No alias","Setaria italica ","component *(MCM4) of MCM replicative DNA helicase complex","protein_coding"
"Seita.6G008100.1","No alias","Setaria italica ","component *(CAF1b/FAS2) of CAF1 histone chaperone complex","protein_coding"
"Seita.6G092500.1","No alias","Setaria italica ","DUF26 protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.6G205200.1","No alias","Setaria italica ","EIL-type transcription factor","protein_coding"
"Seita.7G065800.1","No alias","Setaria italica ","regulatory protein ELP1 of PRC1 histone mono-ubiquitination complex","protein_coding"
"Seita.8G121500.1","No alias","Setaria italica ","component *(MCM2) of MCM replicative DNA helicase complex","protein_coding"
"Seita.9G012300.1","No alias","Setaria italica ","component *(NUF2) of NDC80 outer kinetochore complex","protein_coding"
"Seita.9G145300.1","No alias","Setaria italica ","deoxyuridine triphosphatase *(DUT) & EC_3.6 hydrolase acting on acid anhydride","protein_coding"
"Seita.9G169400.1","No alias","Setaria italica ","Serpin protease inhibitor","protein_coding"
"Seita.9G278400.1","No alias","Setaria italica ","modification reader component *(LHP1) of PRC1 histone mono-ubiquitination complex","protein_coding"
"Seita.9G446600.1","No alias","Setaria italica ","subfamily ABCC transporter","protein_coding"
"Seita.9G511000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Sobic.001G041200.1","No alias","Sorghum bicolor ","peptidyl-prolyl cis-trans isomerase *(CYP22) & EC_5.2 cis-trans-isomerase","protein_coding"
"Sobic.001G074200.1","No alias","Sorghum bicolor ","LRR-XIV protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.001G111000.1","No alias","Sorghum bicolor ","glutamate decarboxylase *(GAD)","protein_coding"
"Sobic.001G117300.1","No alias","Sorghum bicolor ","component *(HYC) of phosphatidylinositol 4-kinase complex","protein_coding"
"Sobic.001G129400.2","No alias","Sorghum bicolor ","component *(bS21m) of small mitoribosomal-subunit proteome","protein_coding"
"Sobic.001G145700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G150200.1","No alias","Sorghum bicolor ","WAK/WAKL protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.001G188700.1","No alias","Sorghum bicolor ","component *(OST3/6) of oligosaccharyl transferase (OST) complex","protein_coding"
"Sobic.001G208600.2","No alias","Sorghum bicolor ","EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.001G252500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G291500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G295200.1","No alias","Sorghum bicolor ","nucleoside diphosphate kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.001G380600.1","No alias","Sorghum bicolor ","EC_3.4 hydrolase acting on peptide bond (peptidase) & Nardilysin-like peptidase","protein_coding"
"Sobic.001G421700.2","No alias","Sorghum bicolor ","lipid transfer protein *(ORP3a)","protein_coding"
"Sobic.001G423300.1","No alias","Sorghum bicolor ","component *(Toc75-III) of outer envelope TOC translocation system","protein_coding"
"Sobic.001G433100.3","No alias","Sorghum bicolor ","chaperone of protochlorophyllide oxidoreductase *(DAY) & chaperone of protochlorophyllide oxidoreductase *(CPP1)","protein_coding"
"Sobic.001G455800.1","No alias","Sorghum bicolor ","EC_6.1 ligase forming carbon-oxygen bond & methionine-tRNA ligase","protein_coding"
"Sobic.001G459800.1","No alias","Sorghum bicolor ","UDP-D-glucose 6-dehydrogenase & EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding"
"Sobic.001G478700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G486700.1","No alias","Sorghum bicolor ","adenylosuccinate synthetase *(PUR11) & EC_6.3 ligase forming carbon-nitrogen bond","protein_coding"
"Sobic.001G490800.1","No alias","Sorghum bicolor ","pectin methylesterase","protein_coding"
"Sobic.001G498800.3","No alias","Sorghum bicolor ","nucleotide sugar transporter *(CSTLP)","protein_coding"
"Sobic.001G514500.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G540100.1","No alias","Sorghum bicolor ","valine/leucine/isoleucine aminotransferase & valine/leucine/isoleucine aminotransferase & branched-chain aminotransferase *(BCAT) & EC_2.6 transferase transferring nitrogenous group","protein_coding"
"Sobic.002G023300.1","No alias","Sorghum bicolor ","CAPE precursor polypeptide","protein_coding"
"Sobic.002G067300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G079100.2","No alias","Sorghum bicolor ","methylated DNA binding component *(SUVH1/3) of SUVH-DNAJ methylation reader complex & EC_2.1 transferase transferring one-carbon group","protein_coding"
"Sobic.002G142700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G159300.2","No alias","Sorghum bicolor ","ferrochelatase *(FC)","protein_coding"
"Sobic.002G160700.1","No alias","Sorghum bicolor ","component *(THOC3/Tex1) of mRNP trafficking THO subcomplex","protein_coding"
"Sobic.002G185500.1","No alias","Sorghum bicolor ","UMF15-type solute transporter","protein_coding"
"Sobic.002G222800.1","No alias","Sorghum bicolor ","beta-1,3-galactosyltransferase *(B3GALT)","protein_coding"
"Sobic.002G244700.1","No alias","Sorghum bicolor ","histone demethylase *(PKDM13)","protein_coding"
"Sobic.002G298100.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G317600.1","No alias","Sorghum bicolor ","threonine reactive imine intermediate deaminase *(RidA)","protein_coding"
"Sobic.002G327300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G327800.1","No alias","Sorghum bicolor ","DUF26 protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.002G327900.1","No alias","Sorghum bicolor ","EC_3.2 glycosylase","protein_coding"
"Sobic.002G332900.1","No alias","Sorghum bicolor ","RNA editing factor *(ORRM2)","protein_coding"
"Sobic.002G350800.1","No alias","Sorghum bicolor ","L-lectin protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.002G419800.1","No alias","Sorghum bicolor ","component *(MED5/MED24/MED33) of tail module of MEDIATOR transcription co-activator complex","protein_coding"
"Sobic.002G431700.1","No alias","Sorghum bicolor ","sliding clamp protein *(PCNA)","protein_coding"
"Sobic.003G001400.1","No alias","Sorghum bicolor ","component *(NSE5) of homologous recombination repair Smc5-Smc6 complex","protein_coding"
"Sobic.003G012000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G015400.1","No alias","Sorghum bicolor ","component *(uS6m) of small mitoribosomal-subunit proteome","protein_coding"
"Sobic.003G026200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G028600.2","No alias","Sorghum bicolor ","aminoimidazole RN carboxylase *(PUR6)","protein_coding"
"Sobic.003G067600.1","No alias","Sorghum bicolor ","EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.003G083400.1","No alias","Sorghum bicolor ","myosin adaptor protein *(MadB) & plastid separation myosin adaptor protein *(CLMP)","protein_coding"
"Sobic.003G181800.1","No alias","Sorghum bicolor ","SnRK3 SNF1-related protein kinase & protein kinase *(SOS2) & CBL-dependent protein kinase *(CIPK) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.003G224200.1","No alias","Sorghum bicolor ","MLK-I protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.003G244600.1","No alias","Sorghum bicolor ","acidic chitinase *(CHIA)","protein_coding"
"Sobic.003G264500.1","No alias","Sorghum bicolor ","class tau glutathione S-transferase","protein_coding"
"Sobic.003G291300.1","No alias","Sorghum bicolor ","MRM1-type rRNA methyltransferase","protein_coding"
"Sobic.003G308500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G322400.1","No alias","Sorghum bicolor ","component *(eS25) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Sobic.003G331300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G339800.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G339900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G348200.1","No alias","Sorghum bicolor ","G-protein-coupled receptor-like regulator (7TM)","protein_coding"
"Sobic.003G363100.2","No alias","Sorghum bicolor ","beta-1,6-galactosyltransferase *(GALT29)","protein_coding"
"Sobic.003G367900.1","No alias","Sorghum bicolor ","component *(LSm3) of U6-associated LSm accessory ribonucleoprotein complex","protein_coding"
"Sobic.003G387600.1","No alias","Sorghum bicolor ","component *(CAF1a/FAS1) of CAF1 histone chaperone complex","protein_coding"
"Sobic.003G399200.1","No alias","Sorghum bicolor ","anion transporter *(NRT1/PTR)","protein_coding"
"Sobic.003G402200.2","No alias","Sorghum bicolor ","phytochrome signalling mediator *(SRR1)","protein_coding"
"Sobic.003G422000.1","No alias","Sorghum bicolor ","EC_3.2 glycosylase","protein_coding"
"Sobic.004G025800.1","No alias","Sorghum bicolor ","EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.004G059300.2","No alias","Sorghum bicolor ","sliding clamp protein *(PCNA)","protein_coding"
"Sobic.004G104400.1","No alias","Sorghum bicolor ","EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding"
"Sobic.004G129500.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G241900.1","No alias","Sorghum bicolor ","protease *(Deg)","protein_coding"
"Sobic.004G257800.1","No alias","Sorghum bicolor ","anion channel / anion","protein_coding"
"Sobic.004G272900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G336600.1","No alias","Sorghum bicolor ","sliding clamp protein *(PCNA)","protein_coding"
"Sobic.004G339400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G352600.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.005G004300.3","No alias","Sorghum bicolor ","LRR-VI-2 protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.005G016400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.005G048700.1","No alias","Sorghum bicolor ","EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding"
"Sobic.005G059200.1","No alias","Sorghum bicolor ","transcriptional co-activator *(BET/GTE)","protein_coding"
"Sobic.005G071100.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.005G112100.1","No alias","Sorghum bicolor ","COPI trafficking K/HDEL-signature cargo receptor","protein_coding"
"Sobic.005G131600.2","No alias","Sorghum bicolor ","EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.005G157100.1","No alias","Sorghum bicolor ","tRNA cytidine acetyltransferase adaptor protein","protein_coding"
"Sobic.005G169200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.005G169600.1","No alias","Sorghum bicolor ","plastidial RNA splicing factor *(CFM3)","protein_coding"
"Sobic.005G199200.1","No alias","Sorghum bicolor ","scaffold nucleoporin of nuclear pore complex *(NUP107)","protein_coding"
"Sobic.006G009600.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G062500.1","No alias","Sorghum bicolor ","membrane-anchored lectin chaperone *(CNX)","protein_coding"
"Sobic.006G084600.1","No alias","Sorghum bicolor ","gamma-aminobutyric acid transporter *(GABP)","protein_coding"
"Sobic.006G106200.1","No alias","Sorghum bicolor ","histone chaperone *(NRP)","protein_coding"
"Sobic.006G200000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G272800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.007G008300.1","No alias","Sorghum bicolor ","component *(CAF1b/FAS2) of CAF1 histone chaperone complex","protein_coding"
"Sobic.007G058800.1","No alias","Sorghum bicolor ","EC_2.1 transferase transferring one-carbon group","protein_coding"
"Sobic.007G140300.1","No alias","Sorghum bicolor ","dephospho-coenzyme A kinase","protein_coding"
"Sobic.007G157100.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.007G197400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.007G200500.1","No alias","Sorghum bicolor ","P2B-type calcium cation-transporting ATPase *(ACA)","protein_coding"
"Sobic.007G225300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.008G000600.2","No alias","Sorghum bicolor ","component *(RPP30/POP2) of RNA-dependent RNase P complex","protein_coding"
"Sobic.008G038100.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.008G038600.1","No alias","Sorghum bicolor ","diaminopimelate decarboxylase & EC_4.1 carbon-carbon lyase","protein_coding"
"Sobic.008G051200.1","No alias","Sorghum bicolor ","co-chaperone (GFA2) involved in gametogenesis & co-chaperone *(Hsp40)","protein_coding"
"Sobic.008G081600.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G051700.1","No alias","Sorghum bicolor ","co-chaperone component *(ERdj3b) of ERdj3B-BiP-SDF2 chaperone complex","protein_coding"
"Sobic.009G072000.1","No alias","Sorghum bicolor ","aminoimidazole RN synthetase *(PUR5)","protein_coding"
"Sobic.009G083000.1","No alias","Sorghum bicolor ","protease *(RBL)","protein_coding"
"Sobic.009G094700.1","No alias","Sorghum bicolor ","FMN hydrolase","protein_coding"
"Sobic.009G141400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G167100.1","No alias","Sorghum bicolor ","Rab GTPase-activating protein","protein_coding"
"Sobic.010G003300.1","No alias","Sorghum bicolor ","regulatory co-chaperone *(BAG7)","protein_coding"
"Sobic.010G020200.1","No alias","Sorghum bicolor ","CAPE precursor polypeptide","protein_coding"
"Sobic.010G024600.1","No alias","Sorghum bicolor ","assembly factor IBA57.1 of mitochondrial ISC system transfer phase","protein_coding"
"Sobic.010G040100.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.010G082500.1","No alias","Sorghum bicolor ","component Tic22 of inner envelope TIC translocation system","protein_coding"
"Sobic.010G091000.5","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.010G180700.1","No alias","Sorghum bicolor ","phosphatase-type DBP-type transcription factor & clade G phosphatase *(DBP)","protein_coding"
"Sobic.010G198400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.010G210200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.010G215600.1","No alias","Sorghum bicolor ","homogentisate phytyltransferase *(HPT)","protein_coding"
"Sobic.010G240400.1","No alias","Sorghum bicolor ","PNP precursor polypeptide","protein_coding"
"Sobic.010G265300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.010G267400.1","No alias","Sorghum bicolor ","chaperone *(Hsp90)","protein_coding"
"Sobic.010G277200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Solyc01g057520","No alias","Solanum lycopersicum","ARM repeat superfamily protein (AHRD V3.3 *** A0A061EX70_THECC)","protein_coding"
"Solyc01g060490","No alias","Solanum lycopersicum","GATA transcription factor, putative (AHRD V3.3 *** B9RZK8_RICCO)","protein_coding"
"Solyc01g079500","No alias","Solanum lycopersicum","Vps51/Vps67 family (components of vesicular transport) protein (AHRD V3.3 *** AT4G02030.1)","protein_coding"
"Solyc01g079520","No alias","Solanum lycopersicum","DNA mismatch repair protein (AHRD V3.3 *** Q6DQL6_PETHY)","protein_coding"
"Solyc01g086690","No alias","Solanum lycopersicum","LOW QUALITY:Sister chromatid cohesion 1 protein 3 (AHRD V3.3 *** W9R9I5_9ROSA)","protein_coding"
"Solyc01g088380","No alias","Solanum lycopersicum","DNA replication helicase (AHRD V3.3 *** AT1G08840.4)","protein_coding"
"Solyc01g091340","No alias","Solanum lycopersicum","Peptidyl-prolyl cis-trans isomerase (AHRD V3.3 *-* A0A0K9P1Y7_ZOSMR)","protein_coding"
"Solyc01g095360","No alias","Solanum lycopersicum","LOW QUALITY:Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *** AT4G01200.1)","protein_coding"
"Solyc01g096220","No alias","Solanum lycopersicum","Ras-related protein RABA3 (AHRD V3.3 *** A0A0B2Q7Y9_GLYSO)","protein_coding"
"Solyc01g097970","No alias","Solanum lycopersicum","Deoxyuridine 5'-triphosphate nucleotidohydrolase (AHRD V3.3 *** DUT_SOLLC)","protein_coding"
"Solyc01g100030","No alias","Solanum lycopersicum","deoxyuridine triphosphatase","protein_coding"
"Solyc01g100280","No alias","Solanum lycopersicum","RNA helicase DEAH-box4","protein_coding"
"Solyc01g101030","No alias","Solanum lycopersicum","FACT complex subunit SPT16 (AHRD V3.3 *** W9RSN6_9ROSA)","protein_coding"
"Solyc01g104400","No alias","Solanum lycopersicum","Basic blue protein (AHRD V3.3 *** A0A151R520_CAJCA)","protein_coding"
"Solyc01g104520","No alias","Solanum lycopersicum","At3g54630 (AHRD V3.3 *-* A4FVQ9_ARATH)","protein_coding"
"Solyc01g105140","No alias","Solanum lycopersicum","Serine/arginine rich splicing factor, putative (AHRD V3.3 *** B9SZR9_RICCO)","protein_coding"
"Solyc01g105520","No alias","Solanum lycopersicum","DNA helicase (AHRD V3.3 *** I1Q0P7_ORYGL)","protein_coding"
"Solyc01g111590","No alias","Solanum lycopersicum","Transducin family protein / WD-40 repeat family protein (AHRD V3.3 *** AT2G16780.1)","protein_coding"
"Solyc02g043850","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc02g055460","No alias","Solanum lycopersicum","Protein disulfide-isomerase (AHRD V3.3 *** A0A0B2RKB0_GLYSO)","protein_coding"
"Solyc02g070780","No alias","Solanum lycopersicum","DNA helicase (AHRD V3.3 *** K4B859_SOLLC)","protein_coding"
"Solyc02g079480","No alias","Solanum lycopersicum","FAD-binding Berberine family protein (AHRD V3.3 *** AT4G20860.1)","protein_coding"
"Solyc02g080550","No alias","Solanum lycopersicum","SH3 domain-binding protein 1, putative (AHRD V3.3 *** A0A061F5K7_THECC)","protein_coding"
"Solyc02g083600","No alias","Solanum lycopersicum","Cell cycle checkpoint protein RAD17 (AHRD V3.3 *** W9SMX8_9ROSA)","protein_coding"
"Solyc02g084720","No alias","Solanum lycopersicum","beta-galactosidase 6","protein_coding"
"Solyc02g084980","No alias","Solanum lycopersicum","Hexosyltransferase (AHRD V3.3 *** K4BB12_SOLLC)","protein_coding"
"Solyc02g085390","No alias","Solanum lycopersicum","chromatin remodeling 1 (AHRD V3.3 *** AT5G66750.1)","protein_coding"
"Solyc02g085750","No alias","Solanum lycopersicum","LuxR family transcriptional regulator, putative (AHRD V3.3 *** A0A072U7J6_MEDTR)","protein_coding"
"Solyc02g086470","No alias","Solanum lycopersicum","Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A061EDJ2_THECC)","protein_coding"
"Solyc02g088510","No alias","Solanum lycopersicum","Saccharopine dehydrogenase (AHRD V3.3 *** AT5G39410.1)","protein_coding"
"Solyc02g093300","No alias","Solanum lycopersicum","DNA polymerase (AHRD V3.3 *** H9E8V2_SOLLC)","protein_coding"
"Solyc02g093400","No alias","Solanum lycopersicum","Protein MurJ (AHRD V3.3 *-* A0A1D1XN27_9ARAE)","protein_coding"
"Solyc03g005220","No alias","Solanum lycopersicum","calcium-dependent protein kinase 21 (AHRD V3.3 --* AT4G04720.2)","protein_coding"
"Solyc03g005460","No alias","Solanum lycopersicum","Helicase protein with RING/U-box domain-containing protein (AHRD V3.3 *** AT5G43530.1)","protein_coding"
"Solyc03g007800","No alias","Solanum lycopersicum","Protein timeless like (AHRD V3.3 *** A0A0B2QAC2_GLYSO)","protein_coding"
"Solyc03g033390","No alias","Solanum lycopersicum","F-box family protein (AHRD V3.3 *** A0A061DGH5_THECC)","protein_coding"
"Solyc03g082860","No alias","Solanum lycopersicum","Histone-lysine N-methyltransferase (AHRD V3.3 *** W9S1W1_9ROSA)","protein_coding"
"Solyc03g114690","No alias","Solanum lycopersicum","WD-repeat protein, putative (AHRD V3.3 *** B9RVD7_RICCO)","protein_coding"
"Solyc03g115050","No alias","Solanum lycopersicum","Replication A 70 kDa DNA-binding subunit (AHRD V3.3 *** A0A0B0N129_GOSAR)","protein_coding"
"Solyc03g115200","No alias","Solanum lycopersicum","Glucan endo-1,3-beta-glucosidase-like protein (AHRD V3.3 *** K8DWB8_CUCSA)","protein_coding"
"Solyc03g121580","No alias","Solanum lycopersicum","Transducin family protein / WD-40 repeat family protein (AHRD V3.3 *** AT2G19520.1)","protein_coding"
"Solyc04g005430","No alias","Solanum lycopersicum","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** AT1G78240.2)","protein_coding"
"Solyc04g005730","No alias","Solanum lycopersicum","Transposon protein, putative, CACTA, En/Spm sub-class (AHRD V3.3 *-* Q7G3C6_ORYSJ)","protein_coding"
"Solyc04g008600","No alias","Solanum lycopersicum","Zinc knuckle family protein (AHRD V3.3 *** B9HVL9_POPTR)","protein_coding"
"Solyc04g008850","No alias","Solanum lycopersicum","Eukaryotic aspartyl protease family protein (AHRD V3.3 *** AT3G20015.1)","protein_coding"
"Solyc04g017650","No alias","Solanum lycopersicum","PAX-interacting protein 1 (AHRD V3.3 *** W9RS25_9ROSA)","protein_coding"
"Solyc04g045530","No alias","Solanum lycopersicum","DNA primase large subunit (AHRD V3.3 *** K4BRI2_SOLLC)","protein_coding"
"Solyc04g055110","No alias","Solanum lycopersicum","ARM-repeat/Tetratricopeptide repeat (TPR)-containing protein","protein_coding"
"Solyc04g082070","No alias","Solanum lycopersicum","tRNA pseudouridine synthase (AHRD V3.3 *** B9H5D6_POPTR)","protein_coding"
"Solyc05g007150","No alias","Solanum lycopersicum","UDP-galactose transporter, putative (AHRD V3.3 *** B9S297_RICCO)","protein_coding"
"Solyc05g007450","No alias","Solanum lycopersicum","Origin recognition complex, subunit 6 (AHRD V3.3 *** A0A118K386_CYNCS)","protein_coding"
"Solyc05g007930","No alias","Solanum lycopersicum","Beta-1,3-galactosyltransferase-like protein (AHRD V3.3 *** G7KFC0_MEDTR)","protein_coding"
"Solyc05g008540","No alias","Solanum lycopersicum","Origin recognition complex subunit 4 (AHRD V3.3 *** K4BX28_SOLLC)","protein_coding"
"Solyc05g008780","No alias","Solanum lycopersicum","PROTON PUMP INTERACTOR 1 family protein (AHRD V3.3 *-* U5GXF2_POPTR)","protein_coding"
"Solyc05g009160","No alias","Solanum lycopersicum","Chaperone protein dnaJ 15 (AHRD V3.3 *** DNJ15_ARATH)","protein_coding"
"Solyc05g009660","No alias","Solanum lycopersicum","Transcription factor PERIANTHIA-like protein (AHRD V3.3 *** A0A0B0NQX8_GOSAR)","protein_coding"
"Solyc05g012060","No alias","Solanum lycopersicum","Histone-lysine N-methyltransferase ATX1, putative isoform 2 (AHRD V3.3 *-* A0A061E9H7_THECC)","protein_coding"
"Solyc05g014540","No alias","Solanum lycopersicum","DNA polymerase alpha subunit B (AHRD V3.3 *** K4BYH3_SOLLC)","protein_coding"
"Solyc05g014690","No alias","Solanum lycopersicum","RNA helicase DEAH-box14","protein_coding"
"Solyc05g053470","No alias","Solanum lycopersicum","Chaperonin CPN60, mitochondrial (AHRD V3.3 *** CH60A_ARATH)","protein_coding"
"Solyc05g054430","No alias","Solanum lycopersicum","DNA replication complex GINS protein PSF2 (AHRD V3.3 *** K4C2C1_SOLLC)","protein_coding"
"Solyc06g008210","No alias","Solanum lycopersicum","breast cancer associated RING 1 (AHRD V3.3 *** AT1G04020.1)","protein_coding"
"Solyc06g054560","No alias","Solanum lycopersicum","RNA helicase DEAH-box19","protein_coding"
"Solyc06g072660","No alias","Solanum lycopersicum","Protein DEK (AHRD V3.3 *** A0A0B2QBX5_GLYSO)","protein_coding"
"Solyc06g076660","No alias","Solanum lycopersicum","proliferating cell nuclear antigen","protein_coding"
"Solyc06g076670","No alias","Solanum lycopersicum","RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *** AT1G07350.1)","protein_coding"
"Solyc07g005020","No alias","Solanum lycopersicum","DNA helicase (AHRD V3.3 *** K4CAX4_SOLLC)","protein_coding"
"Solyc07g016210","No alias","Solanum lycopersicum","Specific tissue protein (AHRD V3.3 *** G7IZL4_MEDTR)","protein_coding"
"Solyc07g018250","No alias","Solanum lycopersicum","LOW QUALITY:GNS1/SUR4 membrane protein family (AHRD V3.3 *** AT3G06470.1)","protein_coding"
"Solyc07g018300","No alias","Solanum lycopersicum","Replication protein A subunit (AHRD V3.3 *** A0A1D1Z493_9ARAE)","protein_coding"
"Solyc07g024070","No alias","Solanum lycopersicum","Ubiquitin-conjugating enzyme family protein (AHRD V3.3 *-* B6UES9_MAIZE)","protein_coding"
"Solyc07g053950","No alias","Solanum lycopersicum","DNA-directed RNA polymerase subunit alpha (AHRD V3.3 --* A0A0K1ZCQ4_9ASTE)","protein_coding"
"Solyc07g056390","No alias","Solanum lycopersicum","Endoplasmic oxidoreductin-1, putative (AHRD V3.3 *** B9T812_RICCO)","protein_coding"
"Solyc07g061770","No alias","Solanum lycopersicum","Ankyrin repeat-containing-like protein (AHRD V3.3 *-* A0A061FUD1_THECC)","protein_coding"
"Solyc07g062050","No alias","Solanum lycopersicum","SH2 domain protein A (AHRD V3.3 *** AT1G17040.1)","protein_coding"
"Solyc08g062100","No alias","Solanum lycopersicum","LOW QUALITY:DNA-directed RNA polymerase subunit (AHRD V3.3 --* A0A0P0VD80_ORYSJ)","protein_coding"
"Solyc08g068050","No alias","Solanum lycopersicum","Remodeling and spacing factor 1 (AHRD V3.3 *** A0A151SQU5_CAJCA)","protein_coding"
"Solyc08g076610","No alias","Solanum lycopersicum","Cell cycle checkpoint protein RAD1 (AHRD V3.3 *-* W9RDU4_9ROSA)","protein_coding"
"Solyc08g076910","No alias","Solanum lycopersicum","Ubiquitin carboxyl-terminal hydrolase-like protein (AHRD V3.3 *** G7KF27_MEDTR)","protein_coding"
"Solyc08g077990","No alias","Solanum lycopersicum","Kinase like protein (AHRD V3.3 *-* Q0WPK0_ARATH)","protein_coding"
"Solyc08g079050","No alias","Solanum lycopersicum","transcription factor (AHRD V3.3 *** AT4G22600.1)","protein_coding"
"Solyc08g079150","No alias","Solanum lycopersicum","SAUR-like auxin-responsive protein family (AHRD V3.3 *** AT4G22620.1)","protein_coding"
"Solyc08g079700","No alias","Solanum lycopersicum","Zinc finger A20 and AN1 domain-containing stress-associated protein (AHRD V3.3 *** V5PZR5_9CARY)","protein_coding"
"Solyc08g080280","No alias","Solanum lycopersicum","FAM91 carboxy-terminus protein (AHRD V3.3 --* AT1G35220.6)","protein_coding"
"Solyc08g080720","No alias","Solanum lycopersicum","Selenoprotein H (AHRD V3.3 *-* A0A0B0P3H0_GOSAR)","protein_coding"
"Solyc08g082200","No alias","Solanum lycopersicum","DNA primase (AHRD V3.3 *** K4CPL6_SOLLC)","protein_coding"
"Solyc08g082820","No alias","Solanum lycopersicum","TOMBIPGRBC Tomato BiP (binding protein)/grp78","protein_coding"
"Solyc09g007330","No alias","Solanum lycopersicum","minichromosome maintenance 8 (AHRD V3.3 *** AT3G09660.3)","protein_coding"
"Solyc09g009260","No alias","Solanum lycopersicum","fructose-1,6-bisphosphate aldolase","protein_coding"
"Solyc09g009380","No alias","Solanum lycopersicum","Protein kinase (AHRD V3.3 *-* A0A0K9NMI8_ZOSMR)","protein_coding"
"Solyc09g042760","No alias","Solanum lycopersicum","Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *** AT5G48390.1)","protein_coding"
"Solyc09g075350","No alias","Solanum lycopersicum","Pectinesterase (AHRD V3.3 *** K4CVB2_SOLLC)","protein_coding"
"Solyc09g090560","No alias","Solanum lycopersicum","Transmembrane protein, putative (AHRD V3.3 *** G7I6L6_MEDTR)","protein_coding"
"Solyc09g091280","No alias","Solanum lycopersicum","Retinoblastoma-related protein 1 (AHRD V3.3 *** H9E8V1_SOLLC)","protein_coding"
"Solyc09g091650","No alias","Solanum lycopersicum","P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** AT1G04730.1)","protein_coding"
"Solyc09g092510","No alias","Solanum lycopersicum","Pyrroline-5-carboxylate reductase (AHRD V3.3 *-* A0A1D1ZGA1_9ARAE)","protein_coding"
"Solyc10g007400","No alias","Solanum lycopersicum","DNA polymerase delta subunit 3 (AHRD V3.3 *** A0A0B0NMF9_GOSAR)","protein_coding"
"Solyc10g008320","No alias","Solanum lycopersicum","LOW QUALITY:phosphatidic acid phosphatase 1 (AHRD V3.3 --* AT2G01180.6)","protein_coding"
"Solyc10g011760","No alias","Solanum lycopersicum","Aldose 1-epimerase, putative (AHRD V3.3 *** B9RE17_RICCO)","protein_coding"
"Solyc10g079090","No alias","Solanum lycopersicum","Chaperone protein dnaJ, putative (AHRD V3.3 *** B9SL79_RICCO)","protein_coding"
"Solyc10g079510","No alias","Solanum lycopersicum","RAD3-like DNA-binding helicase protein (AHRD V3.3 *** AT1G20720.2)","protein_coding"
"Solyc10g081730","No alias","Solanum lycopersicum","TPX2 (targeting protein for Xklp2) protein family (AHRD V3.3 *** AT2G35880.3)","protein_coding"
"Solyc10g083500","No alias","Solanum lycopersicum","Protein kinase family protein (AHRD V3.3 *-* Q9LZS4_ARATH)","protein_coding"
"Solyc11g005690","No alias","Solanum lycopersicum","TONSOKU protein (AHRD V3.3 *** Q4W7J1_TOBAC)","protein_coding"
"Solyc11g005800","No alias","Solanum lycopersicum","Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** AT5G64630.2)","protein_coding"
"Solyc11g008670","No alias","Solanum lycopersicum","Chromatin assembly factor 1, subunit A, putative (AHRD V3.3 *** B9RM13_RICCO)","protein_coding"
"Solyc11g030600","No alias","Solanum lycopersicum","cytosine-5 DNA methyltransferase","protein_coding"
"Solyc11g045470","No alias","Solanum lycopersicum","zein-binding protein (Protein of unknown function%2C DUF593) (AHRD V3.3 *-* AT3G54740.8)","protein_coding"
"Solyc11g066830","No alias","Solanum lycopersicum","Zinc finger transcription factor 68","protein_coding"
"Solyc12g056200","No alias","Solanum lycopersicum","transferring glycosyl group transferase (DUF604) (AHRD V3.3 *** AT4G11350.1)","protein_coding"
"Solyc12g089330","No alias","Solanum lycopersicum","Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *** AT1G20080.5)","protein_coding"
"Solyc12g098810","No alias","Solanum lycopersicum","Chitinase family protein (AHRD V3.3 *** AT1G05850.2)","protein_coding"
"Solyc12g099370","No alias","Solanum lycopersicum","GATA transcription factor, putative (AHRD V3.3 *** B9RZK8_RICCO)","protein_coding"
"Sopen04g003760","No alias","Solanum pennellii","Replication Fork Protection Component Swi3","protein_coding"
"Sopen06g033050","No alias","Solanum pennellii","Proliferating cell nuclear antigen, C-terminal domain","protein_coding"