"sequence_id","alias","species","description","type"
"101100","No alias","Selaginella moellendorffii ","pathogenesis-related gene 1","protein_coding"
"102852","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"104835","No alias","Selaginella moellendorffii ","Protein kinase superfamily protein","protein_coding"
"104898","No alias","Selaginella moellendorffii ","Protein of unknown function (DUF1012)","protein_coding"
"106976","No alias","Selaginella moellendorffii ","histidinol dehydrogenase","protein_coding"
"10731","No alias","Selaginella moellendorffii ","ferric reduction oxidase 1","protein_coding"
"109515","No alias","Selaginella moellendorffii ","Major facilitator superfamily protein","protein_coding"
"111434","No alias","Selaginella moellendorffii ","glutathione S-transferase TAU 20","protein_coding"
"111621","No alias","Selaginella moellendorffii ","calcium-dependent protein kinase 33","protein_coding"
"113781","No alias","Selaginella moellendorffii ","GDSL-like Lipase/Acylhydrolase superfamily protein","protein_coding"
"114647","No alias","Selaginella moellendorffii ","FAD/NAD(P)-binding oxidoreductase family protein","protein_coding"
"116553","No alias","Selaginella moellendorffii ","Nucleoside diphosphate kinase family protein","protein_coding"
"118799","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"121129","No alias","Selaginella moellendorffii ","glutathione synthetase 2","protein_coding"
"123989","No alias","Selaginella moellendorffii ","glutathione synthetase 2","protein_coding"
"126836","No alias","Selaginella moellendorffii ","Transmembrane amino acid transporter family protein","protein_coding"
"130445","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"134276","No alias","Selaginella moellendorffii ","tubulin beta chain 2","protein_coding"
"135947","No alias","Selaginella moellendorffii ","tubulin beta chain 2","protein_coding"
"136248","No alias","Selaginella moellendorffii ","aldehyde dehydrogenase 5F1","protein_coding"
"139300","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"143846","No alias","Selaginella moellendorffii ","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"14730","No alias","Selaginella moellendorffii ","carboxyesterase 20","protein_coding"
"148915","No alias","Selaginella moellendorffii ","Leucine-rich repeat protein kinase family protein","protein_coding"
"15599","No alias","Selaginella moellendorffii ","calcium-dependent protein kinase 19","protein_coding"
"16110","No alias","Selaginella moellendorffii ","Subtilase family protein","protein_coding"
"16539","No alias","Selaginella moellendorffii ","UDP-Glycosyltransferase superfamily protein","protein_coding"
"167765","No alias","Selaginella moellendorffii ","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein","protein_coding"
"173762","No alias","Selaginella moellendorffii ","molybdenum cofactor sulfurase (LOS5) (ABA3)","protein_coding"
"17751","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"18006","No alias","Selaginella moellendorffii ","Leucine-rich repeat receptor-like protein kinase family protein","protein_coding"
"18337","No alias","Selaginella moellendorffii ","cell division control 2","protein_coding"
"19225","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"19741","No alias","Selaginella moellendorffii ","zinc finger (CCCH-type/C3HC4-type RING finger) family protein","protein_coding"
"231418","No alias","Selaginella moellendorffii ","Metal-dependent phosphohydrolase","protein_coding"
"231661","No alias","Selaginella moellendorffii ","tubulin beta chain 2","protein_coding"
"235084","No alias","Selaginella moellendorffii ","vesicle-associated membrane protein 727","protein_coding"
"25442","No alias","Selaginella moellendorffii ","origin recognition complex protein 6","protein_coding"
"270170","No alias","Selaginella moellendorffii ","aminoalcoholphosphotransferase 1","protein_coding"
"29169","No alias","Selaginella moellendorffii ","acyl-activating enzyme 7","protein_coding"
"29565","No alias","Selaginella moellendorffii ","cytochrome P450, family 81, subfamily D, polypeptide 3","protein_coding"
"31525","No alias","Selaginella moellendorffii ","O-fucosyltransferase family protein","protein_coding"
"3537","No alias","Selaginella moellendorffii ","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"38123","No alias","Selaginella moellendorffii ","PLAC8 family protein","protein_coding"
"38778","No alias","Selaginella moellendorffii ","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"39404","No alias","Selaginella moellendorffii ","AP2/B3-like transcriptional factor family protein","protein_coding"
"402399","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"402661","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"402909","No alias","Selaginella moellendorffii ","synaptotagmin A","protein_coding"
"402994","No alias","Selaginella moellendorffii ","RmlC-like cupins superfamily protein","protein_coding"
"403006","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"403250","No alias","Selaginella moellendorffii ","Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein","protein_coding"
"403378","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"403467","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"403560","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"403691","No alias","Selaginella moellendorffii ","Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein","protein_coding"
"403771","No alias","Selaginella moellendorffii ","Chalcone and stilbene synthase family protein","protein_coding"
"403798","No alias","Selaginella moellendorffii ","Chitinase family protein","protein_coding"
"404114","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"404136","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"404241","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"404427","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"404460","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"404516","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"404580","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"404961","No alias","Selaginella moellendorffii ","damaged DNA binding;exodeoxyribonuclease IIIs","protein_coding"
"404990","No alias","Selaginella moellendorffii ","Undecaprenyl pyrophosphate synthetase family protein","protein_coding"
"405064","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"405303","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"405623","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"405642","No alias","Selaginella moellendorffii ","zinc knuckle (CCHC-type) family protein","protein_coding"
"405986","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"406307","No alias","Selaginella moellendorffii ","SET domain protein 2","protein_coding"
"407019","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"407324","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"407844","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"407938","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"408000","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"408848","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"409319","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"409337","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"409407","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"409460","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"409616","No alias","Selaginella moellendorffii ","ubiquitin-specific protease 8","protein_coding"
"409871","No alias","Selaginella moellendorffii ","ataurora3","protein_coding"
"409908","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"410281","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"410382","No alias","Selaginella moellendorffii ","O-fucosyltransferase family protein","protein_coding"
"410613","No alias","Selaginella moellendorffii ","U5 small nuclear ribonucleoprotein helicase","protein_coding"
"411336","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"411576","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"411685","No alias","Selaginella moellendorffii ","RNA cyclase family protein","protein_coding"
"412234","No alias","Selaginella moellendorffii ","early-responsive to dehydration stress protein (ERD4)","protein_coding"
"412495","No alias","Selaginella moellendorffii ","Peptide chain release factor 1","protein_coding"
"412712","No alias","Selaginella moellendorffii ","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"412771","No alias","Selaginella moellendorffii ","Phosphotyrosine protein phosphatases superfamily protein","protein_coding"
"413007","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"413037","No alias","Selaginella moellendorffii ","D-3-phosphoglycerate dehydrogenase","protein_coding"
"413086","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"413187","No alias","Selaginella moellendorffii ","Protein kinase superfamily protein","protein_coding"
"413755","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"414555","No alias","Selaginella moellendorffii ","Remorin family protein","protein_coding"
"415084","No alias","Selaginella moellendorffii ","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"415134","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"415511","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"415582","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"415668","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"416201","No alias","Selaginella moellendorffii ","Protein kinase superfamily protein","protein_coding"
"416338","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"416402","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"416777","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"416798","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"417455","No alias","Selaginella moellendorffii ","purine permease 1","protein_coding"
"417638","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"417675","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"417843","No alias","Selaginella moellendorffii ","DNA topoisomerase, type IA, core","protein_coding"
"417909","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"417921","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"418238","No alias","Selaginella moellendorffii ","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"418304","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"418356","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"418360","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"418416","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"418679","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"418718","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"418834","No alias","Selaginella moellendorffii ","glutathione synthetase 2","protein_coding"
"418835","No alias","Selaginella moellendorffii ","glutathione synthetase 2","protein_coding"
"418837","No alias","Selaginella moellendorffii ","RmlC-like cupins superfamily protein","protein_coding"
"418840","No alias","Selaginella moellendorffii ","ORTHRUS-like","protein_coding"
"418849","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"418911","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"418952","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"419239","No alias","Selaginella moellendorffii ","Calcium-binding EF hand family protein","protein_coding"
"419423","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"419458","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"420608","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"420655","No alias","Selaginella moellendorffii ","Mov34/MPN/PAD-1 family protein","protein_coding"
"421190","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"421386","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"421411","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"421570","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"423058","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"423313","No alias","Selaginella moellendorffii ","DNAJ heat shock N-terminal domain-containing protein","protein_coding"
"423988","No alias","Selaginella moellendorffii ","Pyridoxal phosphate (PLP)-dependent transferases superfamily protein","protein_coding"
"424001","No alias","Selaginella moellendorffii ","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein","protein_coding"
"424141","No alias","Selaginella moellendorffii ","RED family protein","protein_coding"
"424159","No alias","Selaginella moellendorffii ","Protein of Unknown Function (DUF239)","protein_coding"
"424595","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"424895","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"425223","No alias","Selaginella moellendorffii ","Protein of Unknown Function (DUF239)","protein_coding"
"425282","No alias","Selaginella moellendorffii ","DNA-binding bromodomain-containing protein","protein_coding"
"425362","No alias","Selaginella moellendorffii ","glutathione synthetase 2","protein_coding"
"425395","No alias","Selaginella moellendorffii ","structural maintenance of chromosomes 6A","protein_coding"
"425600","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"425759","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"425760","No alias","Selaginella moellendorffii ","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein","protein_coding"
"426072","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"426190","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"426227","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"426359","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"426391","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"426581","No alias","Selaginella moellendorffii ","SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related","protein_coding"
"426626","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"426724","No alias","Selaginella moellendorffii ","GDSL-like Lipase/Acylhydrolase superfamily protein","protein_coding"
"427207","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"427481","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"427485","No alias","Selaginella moellendorffii ","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"427525","No alias","Selaginella moellendorffii ","THUMP domain-containing protein","protein_coding"
"427846","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"428016","No alias","Selaginella moellendorffii ","calcium-dependent protein kinase 19","protein_coding"
"428017","No alias","Selaginella moellendorffii ","Ribosomal protein S5 domain 2-like superfamily protein","protein_coding"
"428204","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"428274","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"428377","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"428882","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"429326","No alias","Selaginella moellendorffii ","histone deacetylase 14","protein_coding"
"429678","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"429729","No alias","Selaginella moellendorffii ","Uridine diphosphate glycosyltransferase 74E2","protein_coding"
"429772","No alias","Selaginella moellendorffii ","cytochrome P450, family 716, subfamily A, polypeptide 2","protein_coding"
"429813","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"429974","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"430122","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"430140","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"430193","No alias","Selaginella moellendorffii ","17.6 kDa class II heat shock protein","protein_coding"
"430422","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"430642","No alias","Selaginella moellendorffii ","Galactose oxidase/kelch repeat superfamily protein","protein_coding"
"431022","No alias","Selaginella moellendorffii ","Plastid-lipid associated protein PAP / fibrillin family protein","protein_coding"
"431316","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"431357","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"431562","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"432424","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"438274","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"442369","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"61333","No alias","Selaginella moellendorffii ","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"64706","No alias","Selaginella moellendorffii ","S-domain-2 5","protein_coding"
"67275","No alias","Selaginella moellendorffii ","Target of Myb protein 1","protein_coding"
"71953","No alias","Selaginella moellendorffii ","Pentatricopeptide repeat (PPR-like) superfamily protein","protein_coding"
"72266","No alias","Selaginella moellendorffii ","pentatricopeptide (PPR) repeat-containing protein","protein_coding"
"73459","No alias","Selaginella moellendorffii ","17.6 kDa class II heat shock protein","protein_coding"
"73725","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"74217","No alias","Selaginella moellendorffii ","Ankyrin repeat family protein with DHHC zinc finger domain","protein_coding"
"75161","No alias","Selaginella moellendorffii ","Chaperone DnaJ-domain superfamily protein","protein_coding"
"7585","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"77473","No alias","Selaginella moellendorffii ","Zn-dependent exopeptidases superfamily protein","protein_coding"
"78760","No alias","Selaginella moellendorffii ","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"78853","No alias","Selaginella moellendorffii ","aldehyde dehydrogenase 2C4","protein_coding"
"82638","No alias","Selaginella moellendorffii ","succinate dehydrogenase 2-1","protein_coding"
"83391","No alias","Selaginella moellendorffii ","GDP-D-mannose 3\',5\'-epimerase","protein_coding"
"83682","No alias","Selaginella moellendorffii ","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"86646","No alias","Selaginella moellendorffii ","Terpenoid cyclases/Protein prenyltransferases superfamily protein","protein_coding"
"88541","No alias","Selaginella moellendorffii ","calcium-dependent protein kinase 14","protein_coding"
"88913","No alias","Selaginella moellendorffii ","RNA-binding (RRM/RBD/RNP motifs) family protein","protein_coding"
"89431","No alias","Selaginella moellendorffii ","calreticulin 1b","protein_coding"
"91475","No alias","Selaginella moellendorffii ","homolog of asparagine-linked glycosylation 12","protein_coding"
"92732","No alias","Selaginella moellendorffii ","mitochondrial processing peptidase alpha subunit","protein_coding"
"A4A49_40516","No alias","Nicotiana attenuata","glutathione synthetase, chloroplastic","protein_coding"
"AC183372.4_FG008","No alias","Zea mays","Function unknown","protein_coding"
"AC193595.3_FG001","No alias","Zea mays","Protein of unknown function DUF92, transmembrane","protein_coding"
"AC193625.3_FG007","No alias","Zea mays","P-glycoprotein 21","protein_coding"
"AC194970.5_FG004","No alias","Zea mays","Function unknown","protein_coding"
"AC205608.4_FG004","No alias","Zea mays","peptide transporter 2","protein_coding"
"AC208440.3_FG003","No alias","Zea mays","WAPL (Wings apart-like protein regulation of heterochromatin) protein","protein_coding"
"AC218457.2_FG013","No alias","Zea mays","WD40/YVTN repeat-like-containing domain;Bromodomain","protein_coding"
"AC234520.1_FG002","No alias","Zea mays","Homeodomain-like superfamily protein","protein_coding"
"At1g01820","No alias","Arabidopsis thaliana","Peroxisomal membrane protein 11C [Source:UniProtKB/Swiss-Prot;Acc:Q9LQ73]","protein_coding"
"At1g04400","No alias","Arabidopsis thaliana","Cryptochrome-2 [Source:UniProtKB/Swiss-Prot;Acc:Q96524]","protein_coding"
"At1g17455","No alias","Arabidopsis thaliana","ELF4-L4 [Source:UniProtKB/TrEMBL;Acc:A0A178WKX5]","protein_coding"
"At1g21600","No alias","Arabidopsis thaliana","AT1G21600 protein [Source:UniProtKB/TrEMBL;Acc:Q9XI19]","protein_coding"
"At1g27450","No alias","Arabidopsis thaliana","Adenine phosphoribosyl transferase 1 [Source:UniProtKB/TrEMBL;Acc:F4HSX1]","protein_coding"
"At1g30360","No alias","Arabidopsis thaliana","Hyperosmolality-gated Ca2+ permeable channel 3.1 [Source:UniProtKB/TrEMBL;Acc:A0A097NUQ9]","protein_coding"
"At1g31850","No alias","Arabidopsis thaliana","Probable methyltransferase PMT20 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6S7]","protein_coding"
"At1g32090","No alias","Arabidopsis thaliana","Hyperosmolality-gated Ca2+ permeable channel 1.8 [Source:UniProtKB/TrEMBL;Acc:A0A097NUQ2]","protein_coding"
"At1g63480","No alias","Arabidopsis thaliana","AT-hook motif nuclear-localized protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPN5]","protein_coding"
"At1g68220","No alias","Arabidopsis thaliana","Aerobic coproporphyrinogen-III oxidase (DUF1218) [Source:UniProtKB/TrEMBL;Acc:Q9C9F7]","protein_coding"
"At1g69870","No alias","Arabidopsis thaliana","Protein NRT1/ PTR FAMILY 2.13 [Source:UniProtKB/Swiss-Prot;Acc:Q8RX77]","protein_coding"
"At1g77120","No alias","Arabidopsis thaliana","Alcohol dehydrogenase class-P [Source:UniProtKB/Swiss-Prot;Acc:P06525]","protein_coding"
"At2g02100","No alias","Arabidopsis thaliana","PDF2.2 [Source:UniProtKB/TrEMBL;Acc:A0A178VVN9]","protein_coding"
"At2g05630","No alias","Arabidopsis thaliana","Autophagy-related protein [Source:UniProtKB/TrEMBL;Acc:F4IHC1]","protein_coding"
"At2g14170","No alias","Arabidopsis thaliana","Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q0WM29]","protein_coding"
"At2g19470","No alias","Arabidopsis thaliana","Casein kinase 1-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUP4]","protein_coding"
"At2g22660","No alias","Arabidopsis thaliana","Glycine-rich domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQ47]","protein_coding"
"At2g26510","No alias","Arabidopsis thaliana","Nucleobase-ascorbate transporter 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZD4]","protein_coding"
"At2g28840","No alias","Arabidopsis thaliana","Putative E3 ubiquitin-protein ligase XBAT31 [Source:UniProtKB/Swiss-Prot;Acc:Q94B55]","protein_coding"
"At2g37940","No alias","Arabidopsis thaliana","ERH1 [Source:UniProtKB/TrEMBL;Acc:A0A178VV03]","protein_coding"
"At2g41430","No alias","Arabidopsis thaliana","LSR1 [Source:UniProtKB/TrEMBL;Acc:A0A178VWR6]","protein_coding"
"At2g43590","No alias","Arabidopsis thaliana","Endochitinase At2g43590 [Source:UniProtKB/Swiss-Prot;Acc:O24658]","protein_coding"
"At2g45850","No alias","Arabidopsis thaliana","AT-hook motif nuclear-localized protein 9 [Source:UniProtKB/Swiss-Prot;Acc:O80834]","protein_coding"
"At2g46110","No alias","Arabidopsis thaliana","3-methyl-2-oxobutanoate hydroxymethyltransferase 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O82357]","protein_coding"
"At2g47390","No alias","Arabidopsis thaliana","Prolyl oligopeptidase family protein [Source:TAIR;Acc:AT2G47390]","protein_coding"
"At2g47850","No alias","Arabidopsis thaliana","Zinc finger CCCH domain-containing protein 32 [Source:UniProtKB/Swiss-Prot;Acc:Q84W91]","protein_coding"
"At3g04910","No alias","Arabidopsis thaliana","Serine/threonine-protein kinase WNK1 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAV6]","protein_coding"
"At3g05120","No alias","Arabidopsis thaliana","GID1A [Source:UniProtKB/TrEMBL;Acc:A0A178VM30]","protein_coding"
"At3g06483","No alias","Arabidopsis thaliana","[Pyruvate dehydrogenase (acetyl-transferring)] kinase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SBJ1]","protein_coding"
"At3g07640","No alias","Arabidopsis thaliana","At3g07640 [Source:UniProtKB/TrEMBL;Acc:Q8L8V4]","protein_coding"
"At3g10410","No alias","Arabidopsis thaliana","Carboxypeptidase [Source:UniProtKB/TrEMBL;Acc:A0A178VKH6]","protein_coding"
"At3g14310","No alias","Arabidopsis thaliana","Pectinesterase/pectinesterase inhibitor 3 [Source:UniProtKB/Swiss-Prot;Acc:O49006]","protein_coding"
"At3g17780","No alias","Arabidopsis thaliana","B-cell receptor-associated-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LSH0]","protein_coding"
"At3g47800","No alias","Arabidopsis thaliana","Aldose 1-epimerase [Source:UniProtKB/TrEMBL;Acc:Q9STT3]","protein_coding"
"At3g50210","No alias","Arabidopsis thaliana","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A178VCK6]","protein_coding"
"At3g51830","No alias","Arabidopsis thaliana","Phosphoinositide phosphatase SAC8 [Source:UniProtKB/Swiss-Prot;Acc:Q96328]","protein_coding"
"At3g53460","No alias","Arabidopsis thaliana","Chloroplast RNA-binding protein 29 [Source:UniProtKB/TrEMBL;Acc:F4JAF3]","protein_coding"
"At3g58570","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 52 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2F9]","protein_coding"
"At3g58750","No alias","Arabidopsis thaliana","Citrate synthase 2, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:Q9LXS6]","protein_coding"
"At3g60810","No alias","Arabidopsis thaliana","At3g60810 [Source:UniProtKB/TrEMBL;Acc:Q9LZY2]","protein_coding"
"At4g17150","No alias","Arabidopsis thaliana","Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8GWG9]","protein_coding"
"At4g24220","No alias","Arabidopsis thaliana","3-oxo-Delta(4,5)-steroid 5-beta-reductase [Source:UniProtKB/Swiss-Prot;Acc:Q9STX2]","protein_coding"
"At4g25500","No alias","Arabidopsis thaliana","Serine/arginine-rich splicing factor RS40 [Source:UniProtKB/Swiss-Prot;Acc:P92965]","protein_coding"
"At4g33480","No alias","Arabidopsis thaliana","At4g33480 [Source:UniProtKB/TrEMBL;Acc:A2RVW1]","protein_coding"
"At4g33510","No alias","Arabidopsis thaliana","Phospho-2-dehydro-3-deoxyheptonate aldolase [Source:UniProtKB/TrEMBL;Acc:A0A178US70]","protein_coding"
"At4g33540","No alias","Arabidopsis thaliana","Metallo-beta-lactamase family protein [Source:UniProtKB/TrEMBL;Acc:Q8RWE1]","protein_coding"
"At4g37260","No alias","Arabidopsis thaliana","MYB73 [Source:UniProtKB/TrEMBL;Acc:A0A178V4E7]","protein_coding"
"At4g38550","No alias","Arabidopsis thaliana","Arabidopsis phospholipase-like protein (PEARLI 4) family [Source:TAIR;Acc:AT4G38550]","protein_coding"
"At4g39090","No alias","Arabidopsis thaliana","RD19A [Source:UniProtKB/TrEMBL;Acc:A0A178V006]","protein_coding"
"At5g02240","No alias","Arabidopsis thaliana","Uncharacterized protein At5g02240 [Source:UniProtKB/Swiss-Prot;Acc:Q94EG6]","protein_coding"
"At5g03470","No alias","Arabidopsis thaliana","Serine/threonine protein phosphatase 2A regulatory subunit [Source:UniProtKB/TrEMBL;Acc:A0A178UNX1]","protein_coding"
"At5g04740","No alias","Arabidopsis thaliana","ACR12 [Source:UniProtKB/TrEMBL;Acc:A0A178UNY1]","protein_coding"
"At5g08500","No alias","Arabidopsis thaliana","Cleft lip and palate associated transmembrane protein-like [Source:UniProtKB/TrEMBL;Acc:Q9FNN8]","protein_coding"
"At5g10860","No alias","Arabidopsis thaliana","CBSX3 [Source:UniProtKB/TrEMBL;Acc:A0A178UNP9]","protein_coding"
"At5g13300","No alias","Arabidopsis thaliana","ADP-ribosylation factor GTPase-activating protein AGD3 [Source:UniProtKB/Swiss-Prot;Acc:Q5W7F2]","protein_coding"
"At5g14920","No alias","Arabidopsis thaliana","Gibberellin-regulated protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFR3]","protein_coding"
"At5g15640","No alias","Arabidopsis thaliana","Mitochondrial substrate carrier family protein [Source:UniProtKB/TrEMBL;Acc:Q949U9]","protein_coding"
"At5g19770","No alias","Arabidopsis thaliana","Tubulin alpha chain [Source:UniProtKB/TrEMBL;Acc:A0A178UTQ9]","protein_coding"
"At5g27380","No alias","Arabidopsis thaliana","Glutathione synthetase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P46416]","protein_coding"
"At5g43830","No alias","Arabidopsis thaliana","Aluminum induced protein with YGL and LRDR motifs [Source:UniProtKB/TrEMBL;Acc:Q9FG81]","protein_coding"
"At5g46860","No alias","Arabidopsis thaliana","VAM3 [Source:UniProtKB/TrEMBL;Acc:A0A178UDT6]","protein_coding"
"At5g51350","No alias","Arabidopsis thaliana","Leucine-rich repeat receptor-like protein kinase [Source:UniProtKB/TrEMBL;Acc:Q9FGN6]","protein_coding"
"At5g58200","No alias","Arabidopsis thaliana","Calcineurin-like metallo-phosphoesterase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4KDK1]","protein_coding"
"At5g58290","No alias","Arabidopsis thaliana","RPT3 [Source:UniProtKB/TrEMBL;Acc:A0A178UAH2]","protein_coding"
"At5g59010","No alias","Arabidopsis thaliana","Serine/threonine-protein kinase BSK5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIL1]","protein_coding"
"At5g61520","No alias","Arabidopsis thaliana","AT5G61520 protein [Source:UniProtKB/TrEMBL;Acc:B9DGV5]","protein_coding"
"At5g64560","No alias","Arabidopsis thaliana","Magnesium transporter MRS2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLG2]","protein_coding"
"At5g67480","No alias","Arabidopsis thaliana","BTB and TAZ domain protein 4 [Source:TAIR;Acc:AT5G67480]","protein_coding"
"Bradi1g02080","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g02450","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g05490","No alias","Brachypodium distachyon","Guanylate-binding family protein","protein_coding"
"Bradi1g08830","No alias","Brachypodium distachyon","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"Bradi1g10340","No alias","Brachypodium distachyon","cyclase associated protein 1","protein_coding"
"Bradi1g10490","No alias","Brachypodium distachyon","peptide transporter 2","protein_coding"
"Bradi1g11150","No alias","Brachypodium distachyon","Protein of unknown function (DUF1295)","protein_coding"
"Bradi1g12200","No alias","Brachypodium distachyon","5\'-AMP-activated protein kinase-related","protein_coding"
"Bradi1g12300","No alias","Brachypodium distachyon","magnesium (Mg) transporter 10","protein_coding"
"Bradi1g12330","No alias","Brachypodium distachyon","ZIM-like 1","protein_coding"
"Bradi1g20067","No alias","Brachypodium distachyon","Protein kinase superfamily protein","protein_coding"
"Bradi1g20900","No alias","Brachypodium distachyon","RING/FYVE/PHD-type zinc finger family protein","protein_coding"
"Bradi1g21080","No alias","Brachypodium distachyon","Plant protein of unknown function (DUF827)","protein_coding"
"Bradi1g22087","No alias","Brachypodium distachyon","peptide transporter 2","protein_coding"
"Bradi1g23480","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g27310","No alias","Brachypodium distachyon","small G protein family protein / RhoGAP family protein","protein_coding"
"Bradi1g27460","No alias","Brachypodium distachyon","beta-ureidopropionase","protein_coding"
"Bradi1g31650","No alias","Brachypodium distachyon","Ypt/Rab-GAP domain of gyp1p superfamily protein","protein_coding"
"Bradi1g32350","No alias","Brachypodium distachyon","molybdenum cofactor sulfurase (LOS5) (ABA3)","protein_coding"
"Bradi1g36420","No alias","Brachypodium distachyon","Sec14p-like phosphatidylinositol transfer family protein","protein_coding"
"Bradi1g37967","No alias","Brachypodium distachyon","EXS (ERD1/XPR1/SYG1) family protein","protein_coding"
"Bradi1g38687","No alias","Brachypodium distachyon","spermidine synthase 3","protein_coding"
"Bradi1g43940","No alias","Brachypodium distachyon","DNAse I-like superfamily protein","protein_coding"
"Bradi1g45833","No alias","Brachypodium distachyon","kinesin like protein for actin based chloroplast movement 1","protein_coding"
"Bradi1g47090","No alias","Brachypodium distachyon","serine carboxypeptidase-like 29","protein_coding"
"Bradi1g47920","No alias","Brachypodium distachyon","ENTH/ANTH/VHS superfamily protein","protein_coding"
"Bradi1g50330","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g55300","No alias","Brachypodium distachyon","Sucrose-6F-phosphate phosphohydrolase family protein","protein_coding"
"Bradi1g62957","No alias","Brachypodium distachyon","sucrose synthase 3","protein_coding"
"Bradi1g63320","No alias","Brachypodium distachyon","Malectin/receptor-like protein kinase family protein","protein_coding"
"Bradi1g67180","No alias","Brachypodium distachyon","Mitochondrial substrate carrier family protein","protein_coding"
"Bradi1g72160","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g76190","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g78246","No alias","Brachypodium distachyon","Plant thionin","protein_coding"
"Bradi2g00650","No alias","Brachypodium distachyon","1-deoxy-D-xylulose 5-phosphate reductoisomerase","protein_coding"
"Bradi2g04490","No alias","Brachypodium distachyon","Peroxidase superfamily protein","protein_coding"
"Bradi2g09940","No alias","Brachypodium distachyon","PQ-loop repeat family protein / transmembrane family protein","protein_coding"
"Bradi2g10027","No alias","Brachypodium distachyon","zinc induced facilitator-like 2","protein_coding"
"Bradi2g12710","No alias","Brachypodium distachyon","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Bradi2g13320","No alias","Brachypodium distachyon","light-mediated development protein 1 / deetiolated1 (DET1)","protein_coding"
"Bradi2g18877","No alias","Brachypodium distachyon","hexokinase 2","protein_coding"
"Bradi2g19326","No alias","Brachypodium distachyon","phosphofructokinase 3","protein_coding"
"Bradi2g20150","No alias","Brachypodium distachyon","TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein","protein_coding"
"Bradi2g21850","No alias","Brachypodium distachyon","DNAse I-like superfamily protein","protein_coding"
"Bradi2g23920","No alias","Brachypodium distachyon","Syntaxin/t-SNARE family protein","protein_coding"
"Bradi2g24110","No alias","Brachypodium distachyon","tubby like protein 10","protein_coding"
"Bradi2g25610","No alias","Brachypodium distachyon","transducin family protein / WD-40 repeat family protein","protein_coding"
"Bradi2g25640","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi2g32230","No alias","Brachypodium distachyon","Nodulin MtN3 family protein","protein_coding"
"Bradi2g33550","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi2g33600","No alias","Brachypodium distachyon","ubiquiting-conjugating enzyme 2","protein_coding"
"Bradi2g35760","No alias","Brachypodium distachyon","Predicted pyridoxal phosphate-dependent enzyme, YBL036C type","protein_coding"
"Bradi2g36470","No alias","Brachypodium distachyon","mitogen-activated protein kinase 16","protein_coding"
"Bradi2g43740","No alias","Brachypodium distachyon","FTSH protease 11","protein_coding"
"Bradi2g44920","No alias","Brachypodium distachyon","Metal-dependent phosphohydrolase","protein_coding"
"Bradi2g45830","No alias","Brachypodium distachyon","Peptidase S41 family protein","protein_coding"
"Bradi2g47140","No alias","Brachypodium distachyon","Uncharacterised conserved protein UCP031088, alpha/beta hydrolase","protein_coding"
"Bradi2g47560","No alias","Brachypodium distachyon","Sec14p-like phosphatidylinositol transfer family protein","protein_coding"
"Bradi2g49790","No alias","Brachypodium distachyon","Integrin-linked protein kinase family","protein_coding"
"Bradi2g51500","No alias","Brachypodium distachyon","zinc knuckle (CCHC-type) family protein","protein_coding"
"Bradi2g52070","No alias","Brachypodium distachyon","homolog of yeast autophagy 18 (ATG18) H","protein_coding"
"Bradi2g56250","No alias","Brachypodium distachyon","TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein","protein_coding"
"Bradi2g56920","No alias","Brachypodium distachyon","F-box/RNI-like superfamily protein","protein_coding"
"Bradi3g03870","No alias","Brachypodium distachyon","Protein phosphatase 2C family protein","protein_coding"
"Bradi3g05830","No alias","Brachypodium distachyon","Vacuolar import/degradation, Vid27-related protein","protein_coding"
"Bradi3g06260","No alias","Brachypodium distachyon","Myosin heavy chain-related protein","protein_coding"
"Bradi3g07700","No alias","Brachypodium distachyon","regulatory particle triple-A ATPase 6A","protein_coding"
"Bradi3g09210","No alias","Brachypodium distachyon","phosphoenolpyruvate carboxylase 3","protein_coding"
"Bradi3g10180","No alias","Brachypodium distachyon","Enoyl-CoA hydratase/isomerase family","protein_coding"
"Bradi3g10190","No alias","Brachypodium distachyon","Tesmin/TSO1-like CXC domain-containing protein","protein_coding"
"Bradi3g10650","No alias","Brachypodium distachyon","Protein with RING/U-box and TRAF-like domains","protein_coding"
"Bradi3g10660","No alias","Brachypodium distachyon","CLP protease regulatory subunit X","protein_coding"
"Bradi3g15607","No alias","Brachypodium distachyon","4-phospho-panto-thenoylcysteine synthetase","protein_coding"
"Bradi3g17060","No alias","Brachypodium distachyon","Protein of unknown function (DUF1336)","protein_coding"
"Bradi3g18840","No alias","Brachypodium distachyon","4\'-phosphopantetheinyl transferase superfamily","protein_coding"
"Bradi3g18930","No alias","Brachypodium distachyon","Syntaxin/t-SNARE family protein","protein_coding"
"Bradi3g19980","No alias","Brachypodium distachyon","Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein","protein_coding"
"Bradi3g28320","No alias","Brachypodium distachyon","peroxin-12","protein_coding"
"Bradi3g28937","No alias","Brachypodium distachyon","Pleckstrin homology (PH) and lipid-binding START domains-containing protein","protein_coding"
"Bradi3g33400","No alias","Brachypodium distachyon","myb-like transcription factor family protein","protein_coding"
"Bradi3g34020","No alias","Brachypodium distachyon","beta-hydroxyisobutyryl-CoA hydrolase 1","protein_coding"
"Bradi3g35000","No alias","Brachypodium distachyon","ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein","protein_coding"
"Bradi3g36697","No alias","Brachypodium distachyon","Nucleotide-diphospho-sugar transferases superfamily protein","protein_coding"
"Bradi3g43360","No alias","Brachypodium distachyon","Protein phosphatase 2C family protein","protein_coding"
"Bradi3g44530","No alias","Brachypodium distachyon","Protein of unknown function (DUF803)","protein_coding"
"Bradi3g48850","No alias","Brachypodium distachyon","ATP binding;ATP-dependent helicases;DNA helicases","protein_coding"
"Bradi3g52340","No alias","Brachypodium distachyon","Target of Myb protein 1","protein_coding"
"Bradi3g53740","No alias","Brachypodium distachyon","Transmembrane amino acid transporter family protein","protein_coding"
"Bradi3g53850","No alias","Brachypodium distachyon","homolog of yeast autophagy 18 (ATG18) B","protein_coding"
"Bradi3g55030","No alias","Brachypodium distachyon","glutathione-disulfide reductase","protein_coding"
"Bradi3g55287","No alias","Brachypodium distachyon","Protein of unknown function (DUF3741)","protein_coding"
"Bradi3g56930","No alias","Brachypodium distachyon","ADP-ribosylation factor-like A1A","protein_coding"
"Bradi3g57667","No alias","Brachypodium distachyon","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"Bradi3g58320","No alias","Brachypodium distachyon","RNI-like superfamily protein","protein_coding"
"Bradi3g58790","No alias","Brachypodium distachyon","Ribonuclease II/R family protein","protein_coding"
"Bradi4g00330","No alias","Brachypodium distachyon","carotenoid cleavage dioxygenase 1","protein_coding"
"Bradi4g00450","No alias","Brachypodium distachyon","Trypsin family protein with PDZ domain","protein_coding"
"Bradi4g01430","No alias","Brachypodium distachyon","K+ efflux antiporter 3","protein_coding"
"Bradi4g01630","No alias","Brachypodium distachyon","Metallo-hydrolase/oxidoreductase superfamily protein","protein_coding"
"Bradi4g02900","No alias","Brachypodium distachyon","Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain","protein_coding"
"Bradi4g03477","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi4g04228","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi4g06087","No alias","Brachypodium distachyon","glutathione synthetase 2","protein_coding"
"Bradi4g08050","No alias","Brachypodium distachyon","zinc finger protein 1","protein_coding"
"Bradi4g11710","No alias","Brachypodium distachyon","glutathione synthetase 2","protein_coding"
"Bradi4g13580","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi4g22180","No alias","Brachypodium distachyon","Protein kinase superfamily protein","protein_coding"
"Bradi4g25580","No alias","Brachypodium distachyon","saposin B domain-containing protein","protein_coding"
"Bradi4g25917","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi4g32520","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi4g33450","No alias","Brachypodium distachyon","lipid-binding serum glycoprotein family protein","protein_coding"
"Bradi4g37360","No alias","Brachypodium distachyon","nudix hydrolase homolog 23","protein_coding"
"Bradi4g39137","No alias","Brachypodium distachyon","Zinc finger C-x8-C-x5-C-x3-H type family protein","protein_coding"
"Bradi4g39197","No alias","Brachypodium distachyon","solanesyl diphosphate synthase 2","protein_coding"
"Bradi4g39310","No alias","Brachypodium distachyon","glutathione synthetase 2","protein_coding"
"Bradi4g40410","No alias","Brachypodium distachyon","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding"
"Bradi4g41127","No alias","Brachypodium distachyon","sirtuin 2","protein_coding"
"Bradi5g05230","No alias","Brachypodium distachyon","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Bradi5g10260","No alias","Brachypodium distachyon","F-box protein 7","protein_coding"
"Bradi5g11516","No alias","Brachypodium distachyon","FAR1-related sequence 5","protein_coding"
"Bradi5g18230","No alias","Brachypodium distachyon","ARM-repeat/Tetratricopeptide repeat (TPR)-like protein","protein_coding"
"Bradi5g19160","No alias","Brachypodium distachyon","Mechanosensitive ion channel protein","protein_coding"
"Bradi5g20012","No alias","Brachypodium distachyon","Plant protein of unknown function (DUF827)","protein_coding"
"Bradi5g23950","No alias","Brachypodium distachyon","receptor like protein 9","protein_coding"
"Bradi5g24120","No alias","Brachypodium distachyon","RING/U-box superfamily protein","protein_coding"
"Bradi5g24410","No alias","Brachypodium distachyon","jasmonate-zim-domain protein 12","protein_coding"
"Bradi5g24836","No alias","Brachypodium distachyon","Protein kinase superfamily protein","protein_coding"
"Bradi5g24890","No alias","Brachypodium distachyon","inositol-pentakisphosphate 2-kinase 1","protein_coding"
"Bradi5g25540","No alias","Brachypodium distachyon","Alternative oxidase family protein","protein_coding"
"Bradi5g25667","No alias","Brachypodium distachyon","vitamin E pathway gene 5","protein_coding"
"Bradi5g25850","No alias","Brachypodium distachyon","Protein of unknown function (DUF3755)","protein_coding"
"Brara.A00188.1","No alias","Brassica rapa","non-specific cation channel *(PQL1)","protein_coding"
"Brara.A00288.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A01132.1","No alias","Brassica rapa","sphingolipid fatty acid 2-hydroxylase","protein_coding"
"Brara.A01191.1","No alias","Brassica rapa","EC_3.1 hydrolase acting on ester bond & DNA endonuclease *(ENDO)","protein_coding"
"Brara.A01428.1","No alias","Brassica rapa","acyl-CoA-binding protein *(ACBP1/2/3)","protein_coding"
"Brara.A01775.1","No alias","Brassica rapa","solute transporter *(UmamiT)","protein_coding"
"Brara.A02037.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A02224.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A02909.1","No alias","Brassica rapa","actin filament protein","protein_coding"
"Brara.A02960.1","No alias","Brassica rapa","chromatin architectural modulator *(HMGA)","protein_coding"
"Brara.A03025.1","No alias","Brassica rapa","SMARCJ component *(BDH) of SWI/SNF chromatin remodeling complex","protein_coding"
"Brara.A03068.1","No alias","Brassica rapa","tonoplast intrinsic protein *(TIP)","protein_coding"
"Brara.A03142.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A03143.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A03445.1","No alias","Brassica rapa","ER-tubule curvature-inducing protein *(Reticulon)","protein_coding"
"Brara.A03686.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B00012.1","No alias","Brassica rapa","SnRK3 SNF1-related protein kinase & CBL-dependent protein kinase *(CIPK) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.B00074.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B00460.1","No alias","Brassica rapa","regulatory factor *(TZF) of mRNA stress granule formation","protein_coding"
"Brara.B00538.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B00745.1","No alias","Brassica rapa","EC_2.4 glycosyltransferase & anthranilate phosphoribosyltransferase","protein_coding"
"Brara.B00875.1","No alias","Brassica rapa","galactinol-sucrose galactosyltransferase","protein_coding"
"Brara.B00941.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B01205.1","No alias","Brassica rapa","EC_2.4 glycosyltransferase","protein_coding"
"Brara.B01206.1","No alias","Brassica rapa","EC_2.4 glycosyltransferase","protein_coding"
"Brara.B01512.1","No alias","Brassica rapa","EC_4.4 carbon-sulfur lyase","protein_coding"
"Brara.B01533.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B01538.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B01769.1","No alias","Brassica rapa","biotin","protein_coding"
"Brara.B01886.1","No alias","Brassica rapa","anion transporter *(NRT1/PTR)","protein_coding"
"Brara.B01887.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B01903.1","No alias","Brassica rapa","LRR-VIII-2 protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.B02505.1","No alias","Brassica rapa","aromatic-amino-acid aminotransferase","protein_coding"
"Brara.B02526.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B02655.1","No alias","Brassica rapa","subunit gamma of peripheral CF1 subcomplex of ATP synthase complex","protein_coding"
"Brara.B03020.1","No alias","Brassica rapa","gamma-aminobutyric acid transporter *(GABP)","protein_coding"
"Brara.B03032.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B03407.1","No alias","Brassica rapa","proline dehydrogenase & EC_1.5 oxidoreductase acting on CH-NH group of donor","protein_coding"
"Brara.B03539.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B03764.1","No alias","Brassica rapa","subgroup ERF-IX transcription factor","protein_coding"
"Brara.B03827.1","No alias","Brassica rapa","anion transporter *(NRT1/PTR)","protein_coding"
"Brara.C00113.1","No alias","Brassica rapa","E-class RAB GTPase","protein_coding"
"Brara.C00392.1","No alias","Brassica rapa","IDA/IDL precursor polypeptide","protein_coding"
"Brara.C00603.1","No alias","Brassica rapa","glutaredoxin","protein_coding"
"Brara.C00868.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C01201.1","No alias","Brassica rapa","EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen","protein_coding"
"Brara.C01300.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C01323.1","No alias","Brassica rapa","substrate adaptor of CUL3-based E3 ubiquitin ligase complex","protein_coding"
"Brara.C01502.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C01571.1","No alias","Brassica rapa","RLCK-VIII receptor-like protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.C02126.1","No alias","Brassica rapa","basal transcription factor *(TFIIb)","protein_coding"
"Brara.C02149.1","No alias","Brassica rapa","FAD pyrophosphatase","protein_coding"
"Brara.C02514.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C02540.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C02980.1","No alias","Brassica rapa","rhamnosyltransferase *(RRT)","protein_coding"
"Brara.C03339.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C03491.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C03541.1","No alias","Brassica rapa","LRR-VIII-2 protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.C03681.1","No alias","Brassica rapa","histone H3 demethylase (ICU11/CP) of PRC2 histone methylation complex","protein_coding"
"Brara.C03794.1","No alias","Brassica rapa","pri-miRNA-DCL1 association factor *(DAWDLE) of miRNA biogenesis pathway","protein_coding"
"Brara.C03834.1","No alias","Brassica rapa","glutaredoxin","protein_coding"
"Brara.C04043.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C04047.1","No alias","Brassica rapa","aconitase *(ACO) & aconitase","protein_coding"
"Brara.C04311.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C04552.1","No alias","Brassica rapa","HD-ZIP I/II-type transcription factor","protein_coding"
"Brara.D00329.1","No alias","Brassica rapa","bHLH-type transcription factor","protein_coding"
"Brara.D00403.1","No alias","Brassica rapa","E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1 E3 ubiquitin ligase complex & component *(Ubc13) of Ubc13-Uev1 E2 ubiquitin-conjugating enzyme complex","protein_coding"
"Brara.D00807.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.D00873.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.D01058.1","No alias","Brassica rapa","glutaredoxin","protein_coding"
"Brara.D01381.1","No alias","Brassica rapa","catalytic subunit alpha of CK-II protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.D01553.1","No alias","Brassica rapa","DRP3-dynamin recruiting factor *(FIS1)","protein_coding"
"Brara.D01975.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.D02171.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.D02862.1","No alias","Brassica rapa","pectin methylesterase inhibitor","protein_coding"
"Brara.E00415.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E00437.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E00460.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E00542.1","No alias","Brassica rapa","ARID-type transcription factor","protein_coding"
"Brara.E00590.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E00627.1","No alias","Brassica rapa","subunit C of ribonuclease H2 complex","protein_coding"
"Brara.E00644.1","No alias","Brassica rapa","solute transporter *(AAAP)","protein_coding"
"Brara.E00821.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E00841.1","No alias","Brassica rapa","component *(GRF) of GRF-GIF transcriptional complex","protein_coding"
"Brara.E01004.1","No alias","Brassica rapa","SnRK3 SNF1-related protein kinase & CBL-dependent protein kinase *(CIPK) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.E01020.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E01195.1","No alias","Brassica rapa","bHLH-type transcription factor","protein_coding"
"Brara.E01213.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E01719.1","No alias","Brassica rapa","regulatory protein *(TIC) of circadian clock","protein_coding"
"Brara.E01857.1","No alias","Brassica rapa","alkaline sucrose-specific invertase *(CIN)","protein_coding"
"Brara.E02106.1","No alias","Brassica rapa","NAD kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.E02288.1","No alias","Brassica rapa","regulatory factor *(RBP45/47) of mRNA stress granule formation","protein_coding"
"Brara.E02464.1","No alias","Brassica rapa","E3 ubiquitin ligase *(UPL6)","protein_coding"
"Brara.E02542.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E02564.1","No alias","Brassica rapa","EC_3.2 glycosylase","protein_coding"
"Brara.E02615.1","No alias","Brassica rapa","SBP-type transcription factor","protein_coding"
"Brara.E02775.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E03337.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E03561.1","No alias","Brassica rapa","isopentenyl diphosphate isomerase & EC_5.3 intramolecular oxidoreductase","protein_coding"
"Brara.E03599.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E03653.1","No alias","Brassica rapa","alpha dioxygenase & alpha dioxygenase *(DOX)","protein_coding"
"Brara.F00032.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F00064.1","No alias","Brassica rapa","plasma membrane-to-nucleus signalling factor *(BRX)","protein_coding"
"Brara.F00174.1","No alias","Brassica rapa","caffeoyl shikimate esterase *(CSE)","protein_coding"
"Brara.F00459.1","No alias","Brassica rapa","beta-type carbonic anhydrase","protein_coding"
"Brara.F00603.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F00901.1","No alias","Brassica rapa","aminoalcohol phosphotransferase & aminoalcohol phosphotransferase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.F01294.1","No alias","Brassica rapa","regulatory protein (CIB) of blue light perception & bHLH-type transcription factor","protein_coding"
"Brara.F01562.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F01590.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F01630.1","No alias","Brassica rapa","E3 ubiquitin protein ligase *(PUB32) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.F01765.1","No alias","Brassica rapa","pectin methylesterase inhibitor","protein_coding"
"Brara.F01770.1","No alias","Brassica rapa","LRR-XII protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.F02215.1","No alias","Brassica rapa","substrate adaptor BT of CUL3-BTB E3 ubiquitin ligase complex","protein_coding"
"Brara.F02329.1","No alias","Brassica rapa","NAC-type transcription factor","protein_coding"
"Brara.F02331.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F02333.1","No alias","Brassica rapa","bifunctional alpha-L-arabinofuranosidase and beta-D-xylosidase *(BXL) & EC_3.2 glycosylase","protein_coding"
"Brara.F02358.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F02418.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F02437.1","No alias","Brassica rapa","phosphoenolpyruvate carboxykinase & EC_4.1 carbon-carbon lyase","protein_coding"
"Brara.F02723.1","No alias","Brassica rapa","KNOX-type transcription factor","protein_coding"
"Brara.F02869.1","No alias","Brassica rapa","EC_6.3 ligase forming carbon-nitrogen bond & glutathione synthetase *(GS)","protein_coding"
"Brara.F02932.1","No alias","Brassica rapa","bZIP class-S/SE transcription factor","protein_coding"
"Brara.F03066.1","No alias","Brassica rapa","component *(AUG5) of Augmin gamma-TuRC recruiting complex","protein_coding"
"Brara.F03072.1","No alias","Brassica rapa","regulatory protein *(COB) of cellulose-hemicellulose network assembly","protein_coding"
"Brara.F03170.1","No alias","Brassica rapa","regulatory protein *(CMU) of microtubule-dependent CSC insertion","protein_coding"
"Brara.F03377.1","No alias","Brassica rapa","adaptor component *(ClpF) of chloroplast Clp-type protease complex","protein_coding"
"Brara.F03837.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G00036.1","No alias","Brassica rapa","GARP subgroup PHL transcription factor","protein_coding"
"Brara.G00061.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G00088.1","No alias","Brassica rapa","EC_1.13 oxidoreductase acting on single donor with incorporation of molecular oxygen (oxygenase) & myo-inositol oxygenase","protein_coding"
"Brara.G00436.1","No alias","Brassica rapa","metal cation transporter *(CorA)","protein_coding"
"Brara.G00705.1","No alias","Brassica rapa","LRR-IX protein kinase & protein kinase *(TMK) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.G00707.1","No alias","Brassica rapa","EC_2.4 glycosyltransferase","protein_coding"
"Brara.G00892.1","No alias","Brassica rapa","MYB class-R2R3 subgroup-19/20 transcription factor","protein_coding"
"Brara.G00952.1","No alias","Brassica rapa","EC_2.4 glycosyltransferase & mannan synthase *(CSLA)","protein_coding"
"Brara.G00987.1","No alias","Brassica rapa","component *(MED23) of tail module of MEDIATOR transcription co-activator complex","protein_coding"
"Brara.G01191.1","No alias","Brassica rapa","AP2-type transcription factor *(WRI/AIL)","protein_coding"
"Brara.G01499.1","No alias","Brassica rapa","anion channel / anion","protein_coding"
"Brara.G01546.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G01657.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G01676.1","No alias","Brassica rapa","FCP subclass-E phosphatase","protein_coding"
"Brara.G01684.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G02357.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G02561.1","No alias","Brassica rapa","subgroup ARR-B transcription factor & B-type ARR response activator of cytokinin signalling","protein_coding"
"Brara.G02708.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G02816.1","No alias","Brassica rapa","P4-type ATPase component *(ALA) of phospholipid flippase complex & active component *(ALA) of ALA-ALIS flippase complex & EC_3.6 hydrolase acting on acid anhydride","protein_coding"
"Brara.G02846.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G03155.1","No alias","Brassica rapa","solute transporter *(MTCC)","protein_coding"
"Brara.G03325.1","No alias","Brassica rapa","BZR-type transcription factor & transcription factor *(BES/BZR)","protein_coding"
"Brara.G03447.1","No alias","Brassica rapa","3-hydroxy-3-methylglutaryl-CoA reductase & EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding"
"Brara.G03613.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G03625.1","No alias","Brassica rapa","triterpenoid synthase & EC_5.4 intramolecular transferase","protein_coding"
"Brara.G03685.1","No alias","Brassica rapa","AP2-type transcription factor *(WRI/AIL)","protein_coding"
"Brara.G03716.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H00093.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H00439.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H00458.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H00614.1","No alias","Brassica rapa","regulatory protein *(ESV1) of dikinase activities","protein_coding"
"Brara.H00635.1","No alias","Brassica rapa","Trihelix-type transcription factor","protein_coding"
"Brara.H00699.1","No alias","Brassica rapa","EC_2.4 glycosyltransferase","protein_coding"
"Brara.H00764.1","No alias","Brassica rapa","EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding"
"Brara.H01109.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H01395.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H01864.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H01865.1","No alias","Brassica rapa","assembly factor (COX16) of cytochrome c oxidase assembly","protein_coding"
"Brara.H01892.1","No alias","Brassica rapa","calcium-permeable channel *(OSCA)","protein_coding"
"Brara.H01951.1","No alias","Brassica rapa","E3 ubiquitin ligase","protein_coding"
"Brara.H01968.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H02046.1","No alias","Brassica rapa","E2 UFM ubiquitin-conjugating enzyme","protein_coding"
"Brara.H02133.1","No alias","Brassica rapa","phosphatidylinositol 4-kinase *(PI4K-gamma)","protein_coding"
"Brara.H02141.1","No alias","Brassica rapa","Parvulin-type protein folding catalyst *(PIN)","protein_coding"
"Brara.H02359.1","No alias","Brassica rapa","organic cation transporter *(PUP)","protein_coding"
"Brara.H02701.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H02818.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H02902.1","No alias","Brassica rapa","3-ketoacyl-CoA synthase *(KCS)","protein_coding"
"Brara.I00091.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I00339.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I00475.1","No alias","Brassica rapa","EC_6.3 ligase forming carbon-nitrogen bond & glutathione synthetase *(GS)","protein_coding"
"Brara.I00586.1","No alias","Brassica rapa","acidic chitinase *(CHIA)","protein_coding"
"Brara.I00753.1","No alias","Brassica rapa","pyruvate kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.I00894.1","No alias","Brassica rapa","channel component *(MCU) of MCU calcium uniporter complex","protein_coding"
"Brara.I00955.1","No alias","Brassica rapa","methylmalonate-semialdehyde dehydrogenase *(MMSD) & EC_1.2 oxidoreductase acting on aldehyde or oxo group of donor","protein_coding"
"Brara.I01182.1","No alias","Brassica rapa","mTERF-type transcription factor","protein_coding"
"Brara.I01627.1","No alias","Brassica rapa","EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen","protein_coding"
"Brara.I01635.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I02539.1","No alias","Brassica rapa","EC_2.4 glycosyltransferase","protein_coding"
"Brara.I02629.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I02685.1","No alias","Brassica rapa","protease *(SBT3)","protein_coding"
"Brara.I03122.1","No alias","Brassica rapa","EC_3.2 glycosylase","protein_coding"
"Brara.I03300.1","No alias","Brassica rapa","alkaline sucrose-specific invertase *(CIN)","protein_coding"
"Brara.I03354.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I03859.1","No alias","Brassica rapa","DNA endonuclease *(CAN)","protein_coding"
"Brara.I03869.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I04063.1","No alias","Brassica rapa","RLCK-V receptor-like protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.I04219.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I04377.1","No alias","Brassica rapa","type-I inositol-polyphosphate 5-phosphatase & EC_3.1 hydrolase acting on ester bond","protein_coding"
"Brara.I04763.1","No alias","Brassica rapa","regulatory protein kinase *(CPK10/30) of nitrate response & calcium sensor and kinase *(CPK) & CDPK protein kinase & EC_2.7 transferase transferring phosphorus-containing group & calcium sensor *(CML)","protein_coding"
"Brara.I04885.1","No alias","Brassica rapa","manganese cation transporter *(Mn-CDF) & manganese cation transporter *(Mn-CDF)","protein_coding"
"Brara.I05081.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I05185.1","No alias","Brassica rapa","lipid droplet-associated hydrolase *(LDAH)","protein_coding"
"Brara.I05212.1","No alias","Brassica rapa","monosaccharide transporter *(STP)","protein_coding"
"Brara.I05283.1","No alias","Brassica rapa","indole-3-acetamide hydrolase","protein_coding"
"Brara.I05390.1","No alias","Brassica rapa","systemic nitrogen signalling polypeptide *(CEPD) & glutaredoxin","protein_coding"
"Brara.I05500.1","No alias","Brassica rapa","endomembrane trafficking ATG6-stability regulator protein *(TRAF1)","protein_coding"
"Brara.J00034.1","No alias","Brassica rapa","plasma membrane intrinsic protein *(PIP)","protein_coding"
"Brara.J00119.1","No alias","Brassica rapa","bifunctional alpha-L-arabinofuranosidase and beta-D-xylosidase *(BXL) & EC_3.2 glycosylase","protein_coding"
"Brara.J00490.1","No alias","Brassica rapa","bifunctional 6-phosphofructo-2-kinase and fructose-2,6-bisphosphatase & EC_3.1 hydrolase acting on ester bond","protein_coding"
"Brara.J00560.1","No alias","Brassica rapa","regulatory protein *(CYCA) of cell cycle","protein_coding"
"Brara.J00609.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J00665.1","No alias","Brassica rapa","cellulose synthase CSC-interactive protein *(TED)","protein_coding"
"Brara.J00838.1","No alias","Brassica rapa","unfoldase component *(ClpX) of mitochondrion Clp-type protease complex","protein_coding"
"Brara.J00852.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J01168.1","No alias","Brassica rapa","EC_2.4 glycosyltransferase","protein_coding"
"Brara.J01339.1","No alias","Brassica rapa","EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.J01658.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J01673.1","No alias","Brassica rapa","A1-class (Pepsin) protease","protein_coding"
"Brara.J01765.1","No alias","Brassica rapa","EC_2.4 glycosyltransferase & anthranilate phosphoribosyltransferase","protein_coding"
"Brara.J01832.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J01969.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J02013.1","No alias","Brassica rapa","D-glucuronic acid kinase","protein_coding"
"Brara.J02287.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J02451.1","No alias","Brassica rapa","bHLH-type transcription factor","protein_coding"
"Brara.J02599.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J02891.1","No alias","Brassica rapa","alpha-class expansin","protein_coding"
"Brara.K00154.1","No alias","Brassica rapa","EC_1.13 oxidoreductase acting on single donor with incorporation of molecular oxygen (oxygenase) & myo-inositol oxygenase","protein_coding"
"Brara.K00339.1","No alias","Brassica rapa","bZIP class-S/SE transcription factor","protein_coding"
"Brara.K00502.1","No alias","Brassica rapa","SD-1 protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.K00627.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.K00667.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.K00683.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.K01083.1","No alias","Brassica rapa","component *(ND6/NQO10) of NADH dehydrogenase proton translocation (module P)","protein_coding"
"Brara.K01246.1","No alias","Brassica rapa","endo-beta-1,4-xylanase","protein_coding"
"Brara.K01286.1","No alias","Brassica rapa","GARP subgroup HHO transcription factor","protein_coding"
"Brara.K01514.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.K01852.1","No alias","Brassica rapa","cutin sn-glycerol-3-phosphate acyltransferase & glycerol-3-phosphate acyltransferase *(GPAT4-8)","protein_coding"
"Brara.K01867.1","No alias","Brassica rapa","glutamate decarboxylase *(GAD)","protein_coding"
"Cre01.g006800","No alias","Chlamydomonas reinhardtii","UDP-Glycosyltransferase superfamily protein","protein_coding"
"Cre01.g045601","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g140900","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g141450","No alias","Chlamydomonas reinhardtii","ubiquitin-conjugating enzyme 16","protein_coding"
"Cre02.g141646","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g168300","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g191850","No alias","Chlamydomonas reinhardtii","indole-3-butyric acid response 1","protein_coding"
"Cre04.g219700","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre04.g227251","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre04.g227301","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre05.g239650","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g311950","No alias","Chlamydomonas reinhardtii","exostosin family protein","protein_coding"
"Cre07.g317550","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre07.g323250","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre07.g332066","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre08.g360650","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre08.g374550","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g421800","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre11.g467728","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g499600","No alias","Chlamydomonas reinhardtii","chloroplastic NIFS-like cysteine desulfurase","protein_coding"
"Cre12.g517600","No alias","Chlamydomonas reinhardtii","U-box domain-containing protein kinase family protein","protein_coding"
"Cre12.g558526","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre13.g563926","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre13.g591700","No alias","Chlamydomonas reinhardtii","tubulin-tyrosine ligases;tubulin-tyrosine ligases","protein_coding"
"Cre14.g610631","No alias","Chlamydomonas reinhardtii","ARM repeat protein interacting with  ABF2","protein_coding"
"Cre14.g612500","No alias","Chlamydomonas reinhardtii","Prenyltransferase family protein","protein_coding"
"Cre17.g696200","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre17.g705000","No alias","Chlamydomonas reinhardtii","calcium-dependent protein kinase 17","protein_coding"
"Cre17.g708800","No alias","Chlamydomonas reinhardtii","glutathione synthetase 2","protein_coding"
"Cre17.g722616","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre17.g747897","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"evm.model.contig_2015.4","No alias","Porphyridium purpureum","(at2g20495 : 91.3) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Serine-threonine protein kinase 19 (InterPro:IPR018865); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 182.6) &  (original description: no original description)","protein_coding"
"evm.model.contig_2019.15","No alias","Porphyridium purpureum","(q9mbd8|bi1_orysa : 108.0) Bax inhibitor 1 (BI-1) (OsBI-1) - Oryza sativa (Rice) & (at5g47120 : 103.0) Encodes BI-1, a homolog of mammalian Bax inhibitor 1.  Functions as an attenuator of biotic and abiotic types of cell death.  Bax-induced cell death can be downregulated by ectopically expressing AtBI in planta.; BAX inhibitor 1 (BI1); CONTAINS InterPro DOMAIN/s: Inhibitor of apoptosis-promoting Bax1 related (InterPro:IPR006214), Bax inhibitor 1, conserved site (InterPro:IPR006213); BEST Arabidopsis thaliana protein match is: Bax inhibitor-1 family protein (TAIR:AT4G17580.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 206.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2019.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2020.17","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2020.20","No alias","Porphyridium purpureum","(at1g34120 : 156.0) Encodes an inositol polyphosphate 5-phosphatase that appears to have Type I activity. It can dephosphorylate IP3(inositol(1,4,5)P3) and IP4 (inositol(1,3,4,5)P4), but it does not act on I(1)P, I(1,4)P2, or phosphatidylinositol(4,5)P2.; inositol polyphosphate 5-phosphatase I (IP5PI); CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT1G71710.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 312.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2021.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2022.2","No alias","Porphyridium purpureum","(at5g60040 : 714.0) Encodes a subunit of RNA polymerase III (aka RNA polymerase C).; nuclear RNA polymerase C1 (NRPC1); FUNCTIONS IN: DNA-directed RNA polymerase activity, ribonucleoside binding, DNA binding, zinc ion binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, N-terminal (InterPro:IPR006592), RNA polymerase, alpha subunit (InterPro:IPR000722), RNA polymerase Rpb1, domain 3 (InterPro:IPR007066), RNA polymerase Rpb1, domain 5 (InterPro:IPR007081), RNA polymerase Rpb1, domain 1 (InterPro:IPR007080), DNA-directed RNA polymerase III largest subunit (InterPro:IPR015700), RNA polymerase Rpb1, domain 4 (InterPro:IPR007083); BEST Arabidopsis thaliana protein match is: RNA polymerase II large subunit (TAIR:AT4G35800.1). & (q9mus6|rpoc1_mesvi : 124.0) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase beta' subunit) (RNA polymerase beta' subunit) - Mesostigma viride & (reliability: 1428.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2024.20","No alias","Porphyridium purpureum","(at1g75170 : 136.0) Sec14p-like phosphatidylinositol transfer family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G36640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 272.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2025.64","No alias","Porphyridium purpureum","(at3g26570 : 229.0) low affinity phosphate transporter; phosphate transporter 2;1 (PHT2;1); FUNCTIONS IN: low affinity phosphate transmembrane transporter activity; INVOLVED IN: phosphate transport; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate transporter (InterPro:IPR001204); Has 12859 Blast hits to 5765 proteins in 1814 species: Archae - 502; Bacteria - 8606; Metazoa - 781; Fungi - 657; Plants - 230; Viruses - 6; Other Eukaryotes - 2077 (source: NCBI BLink). & (reliability: 458.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2027.5","No alias","Porphyridium purpureum","(at2g34570 : 82.8) maternal effect embryo arrest 21 (MEE21); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF652 (InterPro:IPR006984); Has 718 Blast hits to 716 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 246; Fungi - 251; Plants - 108; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (reliability: 165.6) &  (original description: no original description)","protein_coding"
"evm.model.contig_2032.25","No alias","Porphyridium purpureum","(at4g31420 : 111.0) Zinc finger protein 622; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: Zinc finger protein 622 (TAIR:AT2G24500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 222.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2032.3","No alias","Porphyridium purpureum","(at4g11820 : 339.0) Encodes a protein with hydroxymethylglutaryl-CoA synthase activity which was characterized by phenotypical complementation of the S. cerevisiae mutant.; MVA1; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Hydroxymethylglutaryl-coenzyme A synthase C-terminal (InterPro:IPR013746), Hydroxymethylglutaryl-coenzyme A synthase, N-terminal (InterPro:IPR013528), Hydroxymethylglutaryl-CoA synthase, eukaryotic (InterPro:IPR010122), Hydroxymethylglutaryl-coenzyme A synthase, active site (InterPro:IPR000590); Has 2176 Blast hits to 2172 proteins in 850 species: Archae - 228; Bacteria - 1039; Metazoa - 300; Fungi - 184; Plants - 117; Viruses - 0; Other Eukaryotes - 308 (source: NCBI BLink). & (reliability: 678.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2034.2","No alias","Porphyridium purpureum","(at2g46800 : 198.0) Encodes a member of the zinc transporter (ZAT) and cation diffusion facilitator (CDF) families. It is expressed throughout the plant, especially in dividing, differentiating and expanding cells. The protein is localized to the vacuolar membrane. Mediates Zn ion homeostasis.; zinc transporter of Arabidopsis thaliana (ZAT); FUNCTIONS IN: zinc ion transmembrane transporter activity, inorganic anion transmembrane transporter activity, metal ion transmembrane transporter activity; INVOLVED IN: cellular zinc ion homeostasis, zinc ion transport, response to metal ion; LOCATED IN: vacuolar membrane, plasma membrane, vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cation efflux protein (InterPro:IPR002524); BEST Arabidopsis thaliana protein match is: metal tolerance protein A2 (TAIR:AT3G58810.1); Has 17747 Blast hits to 10591 proteins in 2218 species: Archae - 164; Bacteria - 10632; Metazoa - 2900; Fungi - 834; Plants - 528; Viruses - 26; Other Eukaryotes - 2663 (source: NCBI BLink). & (reliability: 396.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2038.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2044.10","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2044.21","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2044.24","No alias","Porphyridium purpureum","(at2g38330 : 94.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT4G38380.1); Has 17219 Blast hits to 17166 proteins in 2310 species: Archae - 394; Bacteria - 13798; Metazoa - 83; Fungi - 156; Plants - 607; Viruses - 0; Other Eukaryotes - 2181 (source: NCBI BLink). & (reliability: 188.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2046.1","No alias","Porphyridium purpureum","(at1g18260 : 96.7) HCP-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Sel1-like (InterPro:IPR006597); BEST Arabidopsis thaliana protein match is: HCP-like superfamily protein (TAIR:AT1G73570.1); Has 24350 Blast hits to 8436 proteins in 1359 species: Archae - 0; Bacteria - 17163; Metazoa - 848; Fungi - 960; Plants - 547; Viruses - 27; Other Eukaryotes - 4805 (source: NCBI BLink). & (reliability: 193.4) &  (original description: no original description)","protein_coding"
"evm.model.contig_2051.16","No alias","Porphyridium purpureum","(at1g05000 : 153.0) Phosphotyrosine protein phosphatases superfamily protein; FUNCTIONS IN: phosphatase activity, protein tyrosine phosphatase activity, phosphoprotein phosphatase activity; INVOLVED IN: dephosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Protein-tyrosine phosphatase, dual specificity phosphatase, eukaryotic (InterPro:IPR020428), Protein-tyrosine phosphatase, SIW14-like (InterPro:IPR004861); BEST Arabidopsis thaliana protein match is: Phosphotyrosine protein phosphatases superfamily protein (TAIR:AT2G32960.1); Has 580 Blast hits to 572 proteins in 119 species: Archae - 0; Bacteria - 14; Metazoa - 1; Fungi - 314; Plants - 145; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink). & (reliability: 306.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2051.17","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2051.26","No alias","Porphyridium purpureum","(at4g19003 : 94.0) VPS25; CONTAINS InterPro DOMAIN/s: ESCRT-II complex, vps25 subunit, N-terminal winged helix (InterPro:IPR014041), ESCRT-II complex, vps25 subunit, C-terminal winged helix (InterPro:IPR014040), ESCRT-II complex, vps25 subunit (InterPro:IPR008570); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 188.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2054.12","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2054.16","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2054.17","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding"
"evm.model.contig_2056.5","No alias","Porphyridium purpureum","(at3g01090 : 464.0) encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It can also interact with PRL1 DWD-containing protein. Based on in vitro degradation assays and cul4cs and prl1 mutants, there is evidence that AKIN10 is degraded in a proteasome-dependent manner, and that this depends on a CUL4-PRL1 E3 ligase; SNF1 kinase homolog 10 (KIN10); FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, protein kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: nuclear ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Kinase-associated KA1 (InterPro:IPR001772), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Protein kinase, Snf1-like AMPK (InterPro:IPR015741), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: SNF1 kinase homolog 11 (TAIR:AT3G29160.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q02723|rkin1_secce : 413.0) Carbon catabolite derepressing protein kinase (EC 2.7.11.1) - Secale cereale (Rye) & (reliability: 928.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2059.27","No alias","Porphyridium purpureum","(at2g29080 : 620.0) encodes an FtsH protease that is localized to the mitochondrion; FTSH protease 3 (ftsh3); FUNCTIONS IN: ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: proteolysis, protein catabolic process; LOCATED IN: mitochondrion, chloroplast thylakoid membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FTSH protease 10 (TAIR:AT1G07510.1); Has 42068 Blast hits to 39734 proteins in 3332 species: Archae - 1581; Bacteria - 17420; Metazoa - 4814; Fungi - 3774; Plants - 3280; Viruses - 30; Other Eukaryotes - 11169 (source: NCBI BLink). & (q5z974|ftsh_orysa : 422.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Oryza sativa (Rice) & (reliability: 1216.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2062.11","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2062.12","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2062.13","No alias","Porphyridium purpureum","(at1g29780 : 137.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: phosphatase activity; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Dullard-like phosphatase domain (InterPro:IPR011948), NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT1G29770.1); Has 2604 Blast hits to 2595 proteins in 253 species: Archae - 0; Bacteria - 14; Metazoa - 864; Fungi - 486; Plants - 454; Viruses - 10; Other Eukaryotes - 776 (source: NCBI BLink). & (reliability: 260.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2069.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2070.19","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2070.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2082.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2083.17","No alias","Porphyridium purpureum","(at3g10070 : 89.0) Encodes one of two Arabidopsis proteins with similarity to the TBP-associated factor TAF12.; TBP-associated factor 12 (TAF12); FUNCTIONS IN: DNA binding, transcription initiation factor activity; INVOLVED IN: transcription initiation; LOCATED IN: chloroplast, transcription factor TFIID complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Transcription initiation factor TFIID (InterPro:IPR003228), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: Transcription initiation factor TFIID subunit A (TAIR:AT1G17440.2); Has 50598 Blast hits to 32470 proteins in 1374 species: Archae - 31; Bacteria - 3770; Metazoa - 21452; Fungi - 11498; Plants - 4385; Viruses - 864; Other Eukaryotes - 8598 (source: NCBI BLink). & (reliability: 178.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2089.13","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2090.9","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2092.4","No alias","Porphyridium purpureum","(at5g03630 : 104.0) ATMDAR2; FUNCTIONS IN: monodehydroascorbate reductase (NADH) activity; INVOLVED IN: response to cadmium ion, response to zinc ion, response to salt stress; LOCATED IN: cytosol; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: monodehydroascorbate reductase 1 (TAIR:AT3G52880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q42711|mdars_cucsa : 95.9) Monodehydroascorbate reductase, seedling isozyme (EC 1.6.5.4) (MDAR seedling) (Ascorbate free radical reductase seedling) (AFR reductase seedling) - Cucumis sativus (Cucumber) & (reliability: 197.2) &  (original description: no original description)","protein_coding"
"evm.model.contig_2092.8","No alias","Porphyridium purpureum","(q39571|yptc1_chlre : 92.4) GTP-binding protein YPTC1 - Chlamydomonas reinhardtii & (at3g09900 : 91.3) RAB GTPase homolog E1E (RABE1e); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog 8C (TAIR:AT5G03520.1); Has 29798 Blast hits to 29728 proteins in 826 species: Archae - 21; Bacteria - 199; Metazoa - 15588; Fungi - 4257; Plants - 3488; Viruses - 20; Other Eukaryotes - 6225 (source: NCBI BLink). & (reliability: 182.6) &  (original description: no original description)","protein_coding"
"evm.model.contig_2094.14","No alias","Porphyridium purpureum","(at1g62750 : 336.0) Nuclear encoded protein consists of the five domains conserved in EF-G proteins, with two GTP-binding sites in the first domain, and an additional transit peptide at the N-terminus. Localized in chloroplasts. Point mutation results in a delay in the onset of germination. At early developmental stage embryos still contain undifferentiated proplastids. The greening of cotyledons is severely impaired in light-grown mutant sco1 seedlings, whereas the following true leaves develop normally as in wild-type plants.; SNOWY COTYLEDON 1 (SCO1); FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, translation elongation factor activity, ATP binding; INVOLVED IN: post-embryonic development, chloroplast organization, seed germination; LOCATED IN: mitochondrion, apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation factor EFG/EF2, domain IV (InterPro:IPR005517), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFG/EF2 (InterPro:IPR004540), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EFG/EF2 protein (TAIR:AT2G45030.1); Has 79823 Blast hits to 67706 proteins in 7071 species: Archae - 929; Bacteria - 47320; Metazoa - 4453; Fungi - 5428; Plants - 1613; Viruses - 3; Other Eukaryotes - 20077 (source: NCBI BLink). & (p34811|efgc_soybn : 328.0) Elongation factor G, chloroplast precursor (EF-G) - Glycine max (Soybean) & (reliability: 672.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2096.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2100.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2106.4","No alias","Porphyridium purpureum","(at5g05560 : 181.0) Arabidopsis thaliana E3 ubiquitin ligase; EMBRYO DEFECTIVE 2771 (EMB2771); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 362.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2112.1","No alias","Porphyridium purpureum","(at3g25620 : 125.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: ATP-binding cassette 14 (TAIR:AT1G31770.1). & (q76cu2|pdr1_tobac : 82.4) Pleiotropic drug resistance protein 1 (NtPDR1) - Nicotiana tabacum (Common tobacco) & (reliability: 250.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2112.2","No alias","Porphyridium purpureum","(at5g06530 : 343.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G52310.1); Has 401964 Blast hits to 364471 proteins in 4136 species: Archae - 7187; Bacteria - 315702; Metazoa - 9377; Fungi - 6648; Plants - 5639; Viruses - 7; Other Eukaryotes - 57404 (source: NCBI BLink). & (q8gu92|pdr2_orysa : 259.0) Probable pleiotropic drug resistance protein 2 - Oryza sativa (Rice) & (reliability: 686.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2114.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2122.1","No alias","Porphyridium purpureum","(at3g12740 : 156.0) Physically interacts with ALA3, and is required for the phospholipid translocase activity of ALA3.; ALA-interacting subunit 1 (ALIS1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF284, transmembrane eukaryotic (InterPro:IPR005045); BEST Arabidopsis thaliana protein match is: LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein (TAIR:AT1G54320.1); Has 864 Blast hits to 864 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 252; Fungi - 234; Plants - 160; Viruses - 0; Other Eukaryotes - 218 (source: NCBI BLink). & (reliability: 312.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2126.1","No alias","Porphyridium purpureum","(at1g69523 : 150.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G69526.2); Has 8414 Blast hits to 8405 proteins in 1811 species: Archae - 286; Bacteria - 5877; Metazoa - 213; Fungi - 292; Plants - 233; Viruses - 0; Other Eukaryotes - 1513 (source: NCBI BLink). & (reliability: 300.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2139.21","No alias","Porphyridium purpureum","(at4g08180 : 102.0) OSBP(oxysterol binding protein)-related protein 1C (ORP1C); FUNCTIONS IN: phosphoinositide binding, oxysterol binding; INVOLVED IN: steroid metabolic process, signal transduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Oxysterol-binding protein (InterPro:IPR000648), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 1A (TAIR:AT2G31020.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 204.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2139.26","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2148.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2157.16","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2165.11","No alias","Porphyridium purpureum","(at1g52600 : 159.0) Peptidase S24/S26A/S26B/S26C family protein; FUNCTIONS IN: peptidase activity; INVOLVED IN: proteolysis, signal peptide processing; LOCATED IN: endoplasmic reticulum, plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S24/S26A/S26B, conserved region (InterPro:IPR019759), Peptidase S26B, eukaryotic signal peptidase (InterPro:IPR001733), Peptidase S24/S26A/S26B/S26C (InterPro:IPR015927); BEST Arabidopsis thaliana protein match is: Peptidase S24/S26A/S26B/S26C family protein (TAIR:AT3G15710.1); Has 958 Blast hits to 958 proteins in 409 species: Archae - 89; Bacteria - 293; Metazoa - 225; Fungi - 153; Plants - 91; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (reliability: 318.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2172.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2172.8","No alias","Porphyridium purpureum","(p29677|mppa_soltu : 192.0) Mitochondrial-processing peptidase alpha subunit, mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) (Ubiquinol-cytochrome-c reductase subunit II) (EC 1.10.2.2) - Solanum tuberosum (Potato) & (at1g51980 : 186.0) Insulinase (Peptidase family M16) protein; FUNCTIONS IN: metalloendopeptidase activity, ATP binding; INVOLVED IN: proteolysis, response to salt stress; LOCATED IN: mitochondrion, plasma membrane, plastid, mitochondrial respiratory chain complex III, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M16, zinc-binding site (InterPro:IPR001431), Peptidase M16, C-terminal (InterPro:IPR007863), Peptidase M16, N-terminal (InterPro:IPR011765), Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249), Peptidase M16, core (InterPro:IPR011237); BEST Arabidopsis thaliana protein match is: mitochondrial processing peptidase alpha subunit (TAIR:AT3G16480.1); Has 5945 Blast hits to 5839 proteins in 1469 species: Archae - 10; Bacteria - 3395; Metazoa - 673; Fungi - 538; Plants - 242; Viruses - 3; Other Eukaryotes - 1084 (source: NCBI BLink). & (reliability: 372.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2172.9","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2192.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2259.4","No alias","Porphyridium purpureum","(at2g36360 : 102.0) Galactose oxidase/kelch repeat superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G74150.1). & (reliability: 204.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2280.3","No alias","Porphyridium purpureum","(at2g23780 : 127.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G19310.1); Has 3846 Blast hits to 3838 proteins in 274 species: Archae - 0; Bacteria - 0; Metazoa - 2175; Fungi - 493; Plants - 714; Viruses - 21; Other Eukaryotes - 443 (source: NCBI BLink). & (reliability: 254.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2281.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2282.8","No alias","Porphyridium purpureum","(at1g14240 : 109.0) GDA1/CD39 nucleoside phosphatase family protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside phosphatase GDA1/CD39 (InterPro:IPR000407); BEST Arabidopsis thaliana protein match is: GDA1/CD39 nucleoside phosphatase family protein (TAIR:AT1G14250.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p80595|apy_soltu : 109.0) Apyrase precursor (EC 3.6.1.5) (ATP-diphosphatase) (Adenosine diphosphatase) (ADPase) (ATP-diphosphohydrolase) - Solanum tuberosum (Potato) & (reliability: 218.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2289.1","No alias","Porphyridium purpureum","(at4g26480 : 129.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT5G56140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 258.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2293.12","No alias","Porphyridium purpureum","(at2g47760 : 244.0) asparagine-linked glycosylation 3 (ALG3); CONTAINS InterPro DOMAIN/s: Glycosyltransferase, ALG3 (InterPro:IPR007873); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 488.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2304.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2305.6","No alias","Porphyridium purpureum","(q8ru33|va0d_orysa : 410.0) Probable vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d subunit) (Vacuolar proton pump subunit d) - Oryza sativa (Rice) & (at3g28710 : 395.0) ATPase, V0/A0 complex, subunit C/D; FUNCTIONS IN: hydrogen ion transmembrane transporter activity, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: proton transport, ATP synthesis coupled proton transport; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: cultured cell, callus; CONTAINS InterPro DOMAIN/s: ATPase, V0/A0 complex, subunit C/D (InterPro:IPR002843), ATPase, V0 complex, subunit D (InterPro:IPR016727); BEST Arabidopsis thaliana protein match is: ATPase, V0/A0 complex, subunit C/D (TAIR:AT3G28715.1); Has 631 Blast hits to 630 proteins in 306 species: Archae - 16; Bacteria - 2; Metazoa - 293; Fungi - 153; Plants - 74; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink). & (reliability: 790.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2313.4","No alias","Porphyridium purpureum","(at5g58140 : 270.0) Membrane-bound protein serine/threonine kinase that functions as blue light photoreceptor in redundancy with PHO1. Involved in stomatal opening, chloroplast movement and phototropism. Mediates blue light-induced growth enhancements. PHOT1 and PHOT2 mediate blue light-dependent activation of the plasma membrane H+-ATPase in guard cell protoplasts. PHOT2 possesses two LOV (LOV1 and LOV2, for light-oxygen-voltage-sensing) domains involved in FMN-binding and a C-terminus forming a serine/threonine kinase domain. LOV2 acts as an inhibitor of phototropin kinase in the dark, and light cancels the inhibition through cysteine-FMN adduct formation. LOV1 in contrast acts as an attenuator of photoactivation.  Localized to the Golgi apparatus under the induction of blue light.; phototropin 2 (PHOT2); FUNCTIONS IN: protein serine/threonine kinase activity, FMN binding, kinase activity, blue light photoreceptor activity; INVOLVED IN: in 7 processes; LOCATED IN: Golgi apparatus, plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Protein kinase, ATP binding site (InterPro:IPR017441), PAS fold (InterPro:IPR013767), Serine/threonine-protein kinase domain (InterPro:IPR002290), PAS (InterPro:IPR000014), PAS-associated, C-terminal (InterPro:IPR000700), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: phototropin 1 (TAIR:AT3G45780.2); Has 25181 Blast hits to 21357 proteins in 1460 species: Archae - 236; Bacteria - 6754; Metazoa - 8411; Fungi - 2718; Plants - 3113; Viruses - 9; Other Eukaryotes - 3940 (source: NCBI BLink). & (p15792|kpk1_phavu : 259.0) Protein kinase PVPK-1 (EC 2.7.11.1) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 540.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2346.5","No alias","Porphyridium purpureum","(at1g19690 : 128.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, catalytic activity; INVOLVED IN: cellular metabolic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); Has 3422 Blast hits to 3422 proteins in 1044 species: Archae - 54; Bacteria - 2233; Metazoa - 3; Fungi - 5; Plants - 67; Viruses - 4; Other Eukaryotes - 1056 (source: NCBI BLink). & (reliability: 256.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2468.3","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding"
"evm.model.contig_2489.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2494.12","No alias","Porphyridium purpureum","(at5g58270 : 578.0) Encodes a mitochondrial half-molecule ABC transporter, a member of ATM subfamily.  Mutants are dwarfed, chlorotic plants with altered leaf morphology. ATM3 transcription is induced by Cd(II) or Pb(II). Involved in heavy metal resistance. Arabidopsis thaliana has three ATM genes, namely ATM1, ATM2 and ATM3. Only ATM3 has an important function for plant growth. Role in Moco biosynthesis.; ABC transporter of the mitochondrion 3 (ATM3); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: in 9 processes; LOCATED IN: mitochondrion, chloroplast, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC transporter of the mitochondrion 1 (TAIR:AT4G28630.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q6yuu5|mdr_orysa : 210.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 1156.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2494.19","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2499.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2505.2","No alias","Porphyridium purpureum","(at4g13720 : 221.0) Inosine triphosphate pyrophosphatase family protein; FUNCTIONS IN: hydrolase activity, pyrophosphatase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ham1-like protein (InterPro:IPR002637); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 442.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2566.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2618.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3385.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3396.7","No alias","Porphyridium purpureum","(at2g34660 : 863.0) encodes a multidrug resistance-associated protein that is MgATP-energized glutathione S-conjugate pump.  The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.; multidrug resistance-associated protein 2 (MRP2); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 1 (TAIR:AT1G30400.2). & (q6yuu5|mdr_orysa : 246.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 1726.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3404.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3405.13","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3409.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3409.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3409.7","No alias","Porphyridium purpureum","(at4g36480 : 228.0) Encodes the LCB1 subunit of serine palmitoyltransferase. Together with the LCB2 subunit, forms a functional serine palmitoyltransferase complex, which catalyzes the first reaction of sphingolipid biosynthesis. Knockout of LCB1 was embryo lethal. Partial suppression of LCB1 expression led to smaller plants due to reduced cell expansion.; long-chain base1 (LCB1); FUNCTIONS IN: protein binding, serine C-palmitoyltransferase activity; INVOLVED IN: cell growth, sphingolipid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: long chain base2 (TAIR:AT5G23670.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 456.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3412.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3416.10","No alias","Porphyridium purpureum","(at5g19910 : 115.0) MED31; FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: regulation of transcription; LOCATED IN: mediator complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med31 (InterPro:IPR008831). & (reliability: 230.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3423.25","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3423.29","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3423.34","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3426.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3427.15","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3435.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3436.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3438.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3441.10","No alias","Porphyridium purpureum","(at1g53000 : 129.0) Encodes a putative CMP-KDO (3-deoxy-D-manno-octulosonate) synthetase.; KDSB; FUNCTIONS IN: 3-deoxy-manno-octulosonate cytidylyltransferase activity, nucleotidyltransferase activity; INVOLVED IN: lipopolysaccharide biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 3-deoxy-D-manno-octulosonate cytidylyltransferase (InterPro:IPR004528), Acylneuraminate cytidylyltransferase (InterPro:IPR003329); Has 7496 Blast hits to 7495 proteins in 1549 species: Archae - 38; Bacteria - 4007; Metazoa - 8; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 3395 (source: NCBI BLink). & (reliability: 258.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3442.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3445.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3445.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3450.8","No alias","Porphyridium purpureum","(at5g44070 : 176.0) Phytochelatin synthase gene confers tolerance to cadmium ions. Catalyzes phytochelatin (PC) synthesis from glutathione (GSH) in the presence of Cd2+, Zn2+, Cu2+ and Fe3+, but not by Co2+ or Ni2+.; CADMIUM SENSITIVE 1 (CAD1); FUNCTIONS IN: cadmium ion binding, copper ion binding, glutathione gamma-glutamylcysteinyltransferase activity; INVOLVED IN: in 6 processes; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phytochelatin synthase, C-terminal (InterPro:IPR015407), Phytochelatin synthase (InterPro:IPR007719); BEST Arabidopsis thaliana protein match is: phytochelatin synthase 2 (TAIR:AT1G03980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 352.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3451.11","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3452.11","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3456.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3480.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3480.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3497.1","No alias","Porphyridium purpureum","(at3g29160 : 293.0) encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1.  It has also been shown to interact with the WD protein PDL1.; SNF1 kinase homolog 11 (KIN11); FUNCTIONS IN: protein binding, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation, protein amino acid autophosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Protein kinase, Snf1-like AMPK (InterPro:IPR015741), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: SNF1 kinase homolog 10 (TAIR:AT3G01090.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q02723|rkin1_secce : 250.0) Carbon catabolite derepressing protein kinase (EC 2.7.11.1) - Secale cereale (Rye) & (reliability: 546.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3516.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3521.6","No alias","Porphyridium purpureum","(at5g44750 : 233.0) Homologous to Y-family DNA polymerases, contains BRCT domain. Mutants are sensitive to UV-B radiation. Gene is involved in damage-tolerance mechanisms through translesion synthesis(TLS).; REV1; FUNCTIONS IN: DNA-directed DNA polymerase activity; INVOLVED IN: DNA repair, response to UV-B, response to DNA damage stimulus; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase, Y-family, little finger domain (InterPro:IPR017961), DNA-repair protein, UmuC-like (InterPro:IPR001126), DNA-repair protein, UmuC-like, N-terminal (InterPro:IPR017963), DNA repair protein, Rev1 (InterPro:IPR012112), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: DNA/RNA polymerases superfamily protein (TAIR:AT1G49980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 466.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3524.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3534.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3545.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3573.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3599.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3735.2","No alias","Porphyridium purpureum","(p10978|polx_tobac : 102.0) Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease] - Nicotiana tabacum (Common tobacco) & (at4g23160 : 95.5) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Reverse transcriptase, RNA-dependent DNA polymerase (InterPro:IPR013103), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 (TAIR:AT4G23140.1); Has 131284 Blast hits to 128961 proteins in 4748 species: Archae - 114; Bacteria - 13787; Metazoa - 45525; Fungi - 11866; Plants - 40839; Viruses - 427; Other Eukaryotes - 18726 (source: NCBI BLink). & (reliability: 191.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3820.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_429.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_435.11","No alias","Porphyridium purpureum","(at5g53580 : 202.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity, aldo-keto reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G06690.1); Has 29267 Blast hits to 29250 proteins in 2546 species: Archae - 568; Bacteria - 19101; Metazoa - 2030; Fungi - 2126; Plants - 1340; Viruses - 0; Other Eukaryotes - 4102 (source: NCBI BLink). & (reliability: 404.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4398.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4400.13","No alias","Porphyridium purpureum","(at5g10010 : 192.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64910.1); Has 33260 Blast hits to 16857 proteins in 1270 species: Archae - 88; Bacteria - 3040; Metazoa - 11915; Fungi - 3137; Plants - 1371; Viruses - 424; Other Eukaryotes - 13285 (source: NCBI BLink). & (reliability: 384.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4400.7","No alias","Porphyridium purpureum","(at2g17130 : 319.0) Encodes a regulatory subunit of the mitochondrially-localized NAD+- dependent isocitrate dehydrogenase.; isocitrate dehydrogenase subunit 2 (IDH2); FUNCTIONS IN: isocitrate dehydrogenase (NAD+) activity; INVOLVED IN: isocitrate metabolic process, tricarboxylic acid cycle, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Isocitrate/isopropylmalate dehydrogenase (InterPro:IPR001804), Isocitrate dehydrogenase NAD-dependent, mitochondrial (InterPro:IPR004434); BEST Arabidopsis thaliana protein match is: isocitrate dehydrogenase 1 (TAIR:AT4G35260.1); Has 15958 Blast hits to 15829 proteins in 2704 species: Archae - 398; Bacteria - 9603; Metazoa - 617; Fungi - 818; Plants - 241; Viruses - 0; Other Eukaryotes - 4281 (source: NCBI BLink). & (p29696|leu3_soltu : 293.0) 3-isopropylmalate dehydrogenase, chloroplast precursor (EC 1.1.1.85) (Beta-IPM dehydrogenase) (IMDH) (3-IPM-DH) - Solanum tuberosum (Potato) & (reliability: 638.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4408.22","No alias","Porphyridium purpureum","(at3g01090 : 211.0) encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It can also interact with PRL1 DWD-containing protein. Based on in vitro degradation assays and cul4cs and prl1 mutants, there is evidence that AKIN10 is degraded in a proteasome-dependent manner, and that this depends on a CUL4-PRL1 E3 ligase; SNF1 kinase homolog 10 (KIN10); FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, protein kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: nuclear ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Kinase-associated KA1 (InterPro:IPR001772), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Protein kinase, Snf1-like AMPK (InterPro:IPR015741), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: SNF1 kinase homolog 11 (TAIR:AT3G29160.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p28582|cdpk_dauca : 194.0) Calcium-dependent protein kinase (EC 2.7.11.1) (CDPK) - Daucus carota (Carrot) & (reliability: 416.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4410.11","No alias","Porphyridium purpureum","(at3g11920 : 132.0) glutaredoxin-related; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: intracellular signaling pathway, cell redox homeostasis; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336), DEP domain (InterPro:IPR000591), Protein of unknown function DUF547 (InterPro:IPR006869); BEST Arabidopsis thaliana protein match is: electron carriers;protein disulfide oxidoreductases (TAIR:AT4G08550.1); Has 2850 Blast hits to 2806 proteins in 762 species: Archae - 4; Bacteria - 1389; Metazoa - 366; Fungi - 36; Plants - 426; Viruses - 0; Other Eukaryotes - 629 (source: NCBI BLink). & (reliability: 264.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4411.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4419.1","No alias","Porphyridium purpureum","(at4g24630 : 99.4) DHHC-type zinc finger family protein; FUNCTIONS IN: receptor activity, zinc ion binding; INVOLVED IN: multicellular organismal development; LOCATED IN: plasma membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594), Plexin-like fold (InterPro:IPR016201); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT5G50020.2); Has 5142 Blast hits to 5136 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 2201; Fungi - 738; Plants - 841; Viruses - 0; Other Eukaryotes - 1362 (source: NCBI BLink). & (reliability: 198.8) &  (original description: no original description)","protein_coding"
"evm.model.contig_4419.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4423.5","No alias","Porphyridium purpureum","(at1g59820 : 382.0) Encodes a phospholipid translocase. Involved in secretory vesicle formation from trans-Golgi in peripheral columella cells at the root tip. Mutants have short primary roots and grow slower.; aminophospholipid ATPase 3 (ALA3); FUNCTIONS IN: phospholipid transporter activity, ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: Golgi vesicle budding, shoot development, root development; LOCATED IN: Golgi apparatus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT1G17500.1); Has 12776 Blast hits to 11290 proteins in 1545 species: Archae - 148; Bacteria - 4231; Metazoa - 2905; Fungi - 2108; Plants - 937; Viruses - 1; Other Eukaryotes - 2446 (source: NCBI BLink). & (q2ras0|aca5_orysa : 96.7) Probable calcium-transporting ATPase 5, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 5) - Oryza sativa (Rice) & (reliability: 718.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4436.1","No alias","Porphyridium purpureum","(at2g47000 : 931.0) Multidrug resistance  P-glycoprotein (MDR/PGP) subfamily of ABC transporters. Functions in the basipetal  redirection of auxin from the root tip. Exhibits apolar plasma membrane localization in the root cap and polar localization in tissues above.; ATP binding cassette subfamily B4 (ABCB4); FUNCTIONS IN: xenobiotic-transporting ATPase activity, ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: in 8 processes; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 21 (TAIR:AT3G62150.1); Has 844144 Blast hits to 390751 proteins in 4168 species: Archae - 14748; Bacteria - 659498; Metazoa - 17847; Fungi - 13026; Plants - 10001; Viruses - 45; Other Eukaryotes - 128979 (source: NCBI BLink). & (q6yuu5|mdr_orysa : 760.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 1862.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4438.6","No alias","Porphyridium purpureum","(at3g08730 : 187.0) Encodes a protein-serine kinase that phosphorylates ribosomal protein in vitro. Activation of AtS6k is regulated by 1-naphthylacetic acid and kinetin, at least in part, via a lipid kinase-dependent pathway. Involved in translational up-regulation of ribosomal proteins. Phosphorylated by PDK1. Interacts with RAPTOR1, which in turn interacts with TOR. SPK6 activity is affected by osmotic stress, and plants overexpressing S6k1 are hypersensitive to osmotic stress.  The gene is expressed in all tissues examined, with highest expression level detected in metabolically active tissues.; protein-serine kinase 1 (PK1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase, C-terminal (InterPro:IPR017892), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), AGC-kinase, C-terminal (InterPro:IPR000961), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: serine/threonine protein kinase 2 (TAIR:AT3G08720.2); Has 134224 Blast hits to 132007 proteins in 4588 species: Archae - 200; Bacteria - 15979; Metazoa - 48799; Fungi - 13454; Plants - 32927; Viruses - 586; Other Eukaryotes - 22279 (source: NCBI BLink). & (q02723|rkin1_secce : 126.0) Carbon catabolite derepressing protein kinase (EC 2.7.11.1) - Secale cereale (Rye) & (reliability: 374.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4438.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4438.8","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_444.14","No alias","Porphyridium purpureum","(at3g13772 : 464.0) Encodes an Arabidopsis Transmembrane nine (TMN) protein.  Transmembrane nine (TM9) proteins are localized in the secretory pathway of eukaryotic cells and are involved in cell adhesion and phagocytosis.  Overexpression of this protein in yeast alters copper and zinc homeostasis.; transmembrane nine 7 (TMN7); INVOLVED IN: cellular copper ion homeostasis, cellular zinc ion homeostasis; LOCATED IN: integral to membrane, Golgi apparatus, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: Endomembrane protein 70 protein family (TAIR:AT1G55130.1); Has 1568 Blast hits to 1544 proteins in 321 species: Archae - 0; Bacteria - 1; Metazoa - 615; Fungi - 232; Plants - 456; Viruses - 0; Other Eukaryotes - 264 (source: NCBI BLink). & (reliability: 914.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_444.22","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4445.4","No alias","Porphyridium purpureum","(at5g43430 : 270.0) Encodes the electron transfer flavoprotein ETF beta, a putative subunit of the mitochondrial electron transfer flavoprotein complex (ETF alpha is At1g50940) in Arabidopsis.  Mutations of the ETF beta gene result in accelerated senescence and early death compared to wild-type during extended darkness.  Also involved in the catabolism of leucine and chlorophyll degradation pathway activated during darkness-induced carbohydrate deprivation.; electron transfer flavoprotein beta (ETFBETA); FUNCTIONS IN: electron carrier activity; INVOLVED IN: chlorophyll catabolic process, leucine catabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Electron transfer flavoprotein, beta-subunit, conserved site (InterPro:IPR000049), Electron transfer flavoprotein, beta subunit (InterPro:IPR012255), Electron transfer flavoprotein, alpha/beta-subunit, N-terminal (InterPro:IPR014730); Has 6953 Blast hits to 6953 proteins in 1650 species: Archae - 156; Bacteria - 4220; Metazoa - 148; Fungi - 127; Plants - 47; Viruses - 0; Other Eukaryotes - 2255 (source: NCBI BLink). & (reliability: 540.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4447.7","No alias","Porphyridium purpureum","(at5g10920 : 392.0) L-Aspartase-like family protein; FUNCTIONS IN: argininosuccinate lyase activity, catalytic activity; INVOLVED IN: arginine biosynthetic process via ornithine, arginine biosynthetic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Argininosuccinate lyase (InterPro:IPR009049), L-Aspartase-like (InterPro:IPR008948), Fumarate lyase, conserved site (InterPro:IPR020557), Lyase 1, N-terminal (InterPro:IPR022761), Delta crystallin (InterPro:IPR003031), Fumarate lyase (InterPro:IPR000362); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p22675|arly_chlre : 345.0) Argininosuccinate lyase (EC 4.3.2.1) (Arginosuccinase) (ASAL) - Chlamydomonas reinhardtii & (reliability: 784.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4449.4","No alias","Porphyridium purpureum","(at2g15430 : 196.0) Non-catalytic subunit of nuclear DNA-dependent RNA polymerases II, IV and V; homologous to budding yeast RPB3 and the E. coli RNA polymerase alpha subunit. A closely related paralog, encoded by At2g15400, can substitute for At2g15430 in the context of Pol V.; NRPB3; FUNCTIONS IN: DNA-directed RNA polymerase activity, protein dimerization activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: in 6 components; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, insert domain (InterPro:IPR011262), DNA-directed RNA polymerase, dimerisation (InterPro:IPR011261), DNA-directed RNA polymerase, RpoA/D/Rpb3-type (InterPro:IPR011263), DNA-directed RNA polymerase, 30-40kDa subunit, conserved site (InterPro:IPR001514), DNA-directed RNA polymerase, RBP11-like (InterPro:IPR009025); BEST Arabidopsis thaliana protein match is: DNA-directed RNA polymerase family protein (TAIR:AT2G15400.1); Has 1362 Blast hits to 1362 proteins in 353 species: Archae - 243; Bacteria - 1; Metazoa - 278; Fungi - 347; Plants - 109; Viruses - 0; Other Eukaryotes - 384 (source: NCBI BLink). & (reliability: 392.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4455.2","No alias","Porphyridium purpureum","(at5g05780 : 320.0) Encodes a putative 26S proteasome subunit RPN8a.  The function of RPN8a and other 26S subunits may be required for specifying leaf adaxial identity.; RP non-ATPase subunit 8A (RPN8A); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ubiquitin-dependent protein catabolic process, leaf morphogenesis; LOCATED IN: proteasome complex, proteasome regulatory particle, lid subcomplex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: Mov34/MPN/PAD-1 family protein (TAIR:AT3G11270.2). & (reliability: 640.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4456.13","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4467.13","No alias","Porphyridium purpureum","(at4g04955 : 237.0) Encodes an allantoinase which is involved in allantoin degradation and assimilation. Gene expression was induced when allantoin was added to the medium. The insertion mutant, ataln m2-1, did not grow well on the MS medium where allantoin, instead of ammonium nitrate, was supplied.; allantoinase (ALN); CONTAINS InterPro DOMAIN/s: Amidohydrolase 1 (InterPro:IPR006680), Allantoinase (InterPro:IPR017593), Metal-dependent hydrolase, composite domain (InterPro:IPR011059); BEST Arabidopsis thaliana protein match is: pyrimidine 2 (TAIR:AT5G12200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 474.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4467.20","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4468.1","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding"
"evm.model.contig_4477.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4478.3","No alias","Porphyridium purpureum","(at1g23440 : 119.0) Peptidase C15, pyroglutamyl peptidase I-like; CONTAINS InterPro DOMAIN/s: Peptidase C15, pyroglutamyl peptidase I-like (InterPro:IPR016125); BEST Arabidopsis thaliana protein match is: Peptidase C15, pyroglutamyl peptidase I-like (TAIR:AT1G56700.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 238.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4479.2","No alias","Porphyridium purpureum","(at5g20890 : 592.0) TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: protein folding, cellular protein metabolic process; LOCATED IN: anchored to plasma membrane, cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperone, tailless complex polypeptide 1 (InterPro:IPR017998), T-complex protein 1, beta subunit (InterPro:IPR012716), Chaperonin TCP-1, conserved site (InterPro:IPR002194); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT3G11830.1); Has 19831 Blast hits to 19435 proteins in 3922 species: Archae - 807; Bacteria - 9602; Metazoa - 2181; Fungi - 1427; Plants - 861; Viruses - 0; Other Eukaryotes - 4953 (source: NCBI BLink). & (p40412|tcpe1_avesa : 243.0) T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) (TCP-K19) - Avena sativa (Oat) & (reliability: 1184.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_448.20","No alias","Porphyridium purpureum","(q08062|mdhc_maize : 99.0) Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) - Zea mays (Maize) & (at1g04410 : 96.3) Lactate/malate dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: response to cadmium ion, response to zinc ion, response to salt stress; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Malate dehydrogenase, NAD-dependent, cytosolic (InterPro:IPR011274), Lactate/malate dehydrogenase, N-terminal (InterPro:IPR001236), Malate dehydrogenase, NAD/NADP (InterPro:IPR010945), Lactate/malate dehydrogenase, C-terminal (InterPro:IPR022383), NAD(P)-binding domain (InterPro:IPR016040), L-lactate/malate dehydrogenase (InterPro:IPR001557), Malate dehydrogenase, active site (InterPro:IPR001252), Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (InterPro:IPR015955); BEST Arabidopsis thaliana protein match is: Lactate/malate dehydrogenase family protein (TAIR:AT5G43330.1); Has 11998 Blast hits to 11997 proteins in 3022 species: Archae - 169; Bacteria - 7171; Metazoa - 1456; Fungi - 287; Plants - 683; Viruses - 0; Other Eukaryotes - 2232 (source: NCBI BLink). & (reliability: 192.6) &  (original description: no original description)","protein_coding"
"evm.model.contig_448.8","No alias","Porphyridium purpureum","(at5g53490 : 122.0) thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein.; Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid lumen; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentapeptide repeat (InterPro:IPR001646); BEST Arabidopsis thaliana protein match is: Pentapeptide repeat-containing protein (TAIR:AT1G12250.2). & (reliability: 244.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_450.10","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4512.2","No alias","Porphyridium purpureum","(at5g62930 : 99.0) SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Esterase, SGNH hydrolase-type, subgroup (InterPro:IPR013831), Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT5G45920.1); Has 689 Blast hits to 688 proteins in 254 species: Archae - 0; Bacteria - 229; Metazoa - 77; Fungi - 158; Plants - 171; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). & (reliability: 198.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4515.5","No alias","Porphyridium purpureum","(at5g09820 : 106.0) Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); BEST Arabidopsis thaliana protein match is: Plastid-lipid associated protein PAP / fibrillin family protein (TAIR:AT3G26070.1); Has 405 Blast hits to 405 proteins in 80 species: Archae - 0; Bacteria - 95; Metazoa - 0; Fungi - 0; Plants - 302; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 212.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_452.2","No alias","Porphyridium purpureum","(q9sm59|pgmp_pea : 568.0) Phosphoglucomutase, chloroplast precursor (EC 5.4.2.2) (Glucose phosphomutase) (PGM) - Pisum sativum (Garden pea) & (at5g51820 : 553.0) Encodes a plastid isoform of the enzyme phosphoglucomutase involved in controlling photosynthetic carbon flow. Effective petiole movement against the direction of the gravity requires functional  PGM activity that is required for full development of amyloplasts.; phosphoglucomutase (PGM); FUNCTIONS IN: phosphoglucomutase activity; INVOLVED IN: response to cold, starch biosynthetic process, detection of gravity, carbohydrate metabolic process; LOCATED IN: apoplast, stromule, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-D-phosphohexomutase, C-terminal (InterPro:IPR005843), Alpha-D-phosphohexomutase, conserved site (InterPro:IPR016066), Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (InterPro:IPR016055), Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (InterPro:IPR005846), Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (InterPro:IPR005845), Alpha-D-phosphohexomutase (InterPro:IPR005841), Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (InterPro:IPR005844); BEST Arabidopsis thaliana protein match is: Phosphoglucomutase/phosphomannomutase family protein (TAIR:AT1G70730.3); Has 12307 Blast hits to 12296 proteins in 2800 species: Archae - 231; Bacteria - 9586; Metazoa - 483; Fungi - 211; Plants - 168; Viruses - 0; Other Eukaryotes - 1628 (source: NCBI BLink). & (reliability: 1048.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_452.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4538.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4555.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_456.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_458.8","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_476.3","No alias","Porphyridium purpureum","(at1g73020 : 109.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF590 (InterPro:IPR007632). & (reliability: 218.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_477.13","No alias","Porphyridium purpureum","(at1g31180 : 191.0) The AtIMD3 is one out of 3 genes encoding the enzyme 3-isopropylmalate dehydrogenase involved in leucine biosynthesis in Arabidopsis. Its subcellular location has been targeted to plastids.; isopropylmalate dehydrogenase 3 (IMD3); FUNCTIONS IN: 3-isopropylmalate dehydrogenase activity; INVOLVED IN: leucine biosynthetic process, response to salt stress, metabolic process; LOCATED IN: thylakoid, chloroplast, chloroplast stroma, plastid; EXPRESSED IN: fruit, root, leaf; EXPRESSED DURING: seed development stages; CONTAINS InterPro DOMAIN/s: Isopropylmalate dehydrogenase (InterPro:IPR004429), Isocitrate/isopropylmalate dehydrogenase (InterPro:IPR001804), Isocitrate/isopropylmalate dehydrogenase, conserved site (InterPro:IPR019818); BEST Arabidopsis thaliana protein match is: isopropylmalate dehydrogenase 1 (TAIR:AT5G14200.1); Has 15253 Blast hits to 15253 proteins in 2616 species: Archae - 395; Bacteria - 8280; Metazoa - 576; Fungi - 831; Plants - 243; Viruses - 0; Other Eukaryotes - 4928 (source: NCBI BLink). & (p29102|leu3_brana : 188.0) 3-isopropylmalate dehydrogenase, chloroplast precursor (EC 1.1.1.85) (Beta-IPM dehydrogenase) (IMDH) (3-IPM-DH) - Brassica napus (Rape) & (reliability: 382.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_477.8","No alias","Porphyridium purpureum","(at5g18640 : 114.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G18630.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 228.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_479.16","No alias","Porphyridium purpureum","(at3g27870 : 338.0) ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: metabolic process, ATP biosynthetic process, phospholipid transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT1G68710.1); Has 13753 Blast hits to 12595 proteins in 1702 species: Archae - 134; Bacteria - 4536; Metazoa - 3490; Fungi - 2070; Plants - 981; Viruses - 3; Other Eukaryotes - 2539 (source: NCBI BLink). & (reliability: 634.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_479.19","No alias","Porphyridium purpureum","(o23732|gshb_braju : 247.0) Glutathione synthetase, chloroplast precursor (EC 6.3.2.3) (Glutathione synthase) (GSH synthetase) (GSH-S) - Brassica juncea (Leaf mustard) (Indian mustard) & (at5g27380 : 244.0) Encodes a protein with similarity to glutathione synthetases, which catalyzes one of the early steps in glutathione biosynthesis. Two transcripts have been detected; the longer transcript is less abundant and the protein is localized to the chloroplast. The smaller transcript, in which the transit peptide is truncated, is localized to the cytosol.; glutathione synthetase 2 (GSH2); FUNCTIONS IN: glutathione synthase activity; INVOLVED IN: response to jasmonic acid stimulus, N-terminal protein myristoylation, glutathione biosynthetic process; LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PreATP-grasp-like fold (InterPro:IPR016185), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Glutathione synthase, eukaryotic (InterPro:IPR005615), Glutathione synthase, substrate-binding, eukaryotic (InterPro:IPR004887), Glutathione synthase, alpha-helical, eukaryotic (InterPro:IPR014042); Has 644 Blast hits to 607 proteins in 239 species: Archae - 0; Bacteria - 51; Metazoa - 212; Fungi - 156; Plants - 112; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (reliability: 488.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_484.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_498.16","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_500.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_505.8","No alias","Porphyridium purpureum","(at5g17300 : 91.7) Myb-like transcription factor that regulates hypocotyl growth by  regulating free auxin levels in a time-of-day specific manner.; REVEILLE 1 (RVE1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT5G37260.1); Has 1557 Blast hits to 1521 proteins in 166 species: Archae - 0; Bacteria - 3; Metazoa - 201; Fungi - 29; Plants - 1060; Viruses - 9; Other Eukaryotes - 255 (source: NCBI BLink). & (reliability: 170.2) &  (original description: no original description)","protein_coding"
"evm.model.contig_517.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_522.27","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_524.3","No alias","Porphyridium purpureum","(at3g62030 : 202.0) nuclear-encoded chloroplast stromal cyclophilin CYP20-3 (also known as ROC4). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; rotamase CYP 4 (ROC4); CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: cyclophilin 20-2 (TAIR:AT5G13120.1). & (q41651|cypb_vicfa : 201.0) Peptidyl-prolyl cis-trans isomerase, chloroplast precursor (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) (CYP B) - Vicia faba (Broad bean) & (reliability: 404.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_527.9","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_529.4","No alias","Porphyridium purpureum","(at1g29900 : 1290.0) carbamoyl phosphate synthetase large chain (CARB) mRNA,; carbamoyl phosphate synthetase B (CARB); FUNCTIONS IN: catalytic activity, ATP binding; INVOLVED IN: cellular response to phosphate starvation, arginine biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbamoyl phosphate synthase, large subunit, N-terminal (InterPro:IPR005481), Carbamoyl phosphate synthetase, large subunit, ATP-binding (InterPro:IPR005479), MGS-like (InterPro:IPR011607), PreATP-grasp-like fold (InterPro:IPR016185), Carbamoyl phosphate synthetase, large subunit, oligomerisation (InterPro:IPR005480), Carbamoyl phosphate synthase, large subunit, glutamine-dependent (InterPro:IPR006275), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Carbamoyl phosphate synthase, large subunit (InterPro:IPR005483), Pre-ATP-grasp fold (InterPro:IPR013817); BEST Arabidopsis thaliana protein match is: acetyl-CoA carboxylase 2 (TAIR:AT1G36180.1); Has 49576 Blast hits to 29968 proteins in 5011 species: Archae - 665; Bacteria - 22536; Metazoa - 6475; Fungi - 1021; Plants - 476; Viruses - 0; Other Eukaryotes - 18403 (source: NCBI BLink). & (reliability: 2580.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_530.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_533.5","No alias","Porphyridium purpureum","(at1g80950 : 119.0) Phospholipid/glycerol acyltransferase family protein; FUNCTIONS IN: acyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endoplasmic reticulum, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: calcineurin B subunit-related (TAIR:AT2G45670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 238.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_545.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_554.8","No alias","Porphyridium purpureum","(at2g44740 : 128.0) cyclin p4;1 (CYCP4;1); CONTAINS InterPro DOMAIN/s: Negative regulatory factor PREG (InterPro:IPR012389), Cyclin-like (InterPro:IPR011028), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN P4;2 (TAIR:AT5G61650.1); Has 1474 Blast hits to 1416 proteins in 218 species: Archae - 0; Bacteria - 18; Metazoa - 247; Fungi - 710; Plants - 236; Viruses - 0; Other Eukaryotes - 263 (source: NCBI BLink). & (reliability: 256.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_559.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_560.10","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_564.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_568.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_579.7","No alias","Porphyridium purpureum","(at1g50670 : 171.0) OTU-like cysteine protease family protein; FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Ovarian tumour, otubain (InterPro:IPR003323); Has 406 Blast hits to 406 proteins in 179 species: Archae - 0; Bacteria - 0; Metazoa - 159; Fungi - 136; Plants - 63; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). & (reliability: 342.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_579.8","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_593.1","No alias","Porphyridium purpureum","(at4g19880 : 338.0) Glutathione S-transferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutathione S-transferase, predicted (InterPro:IPR016639), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutathione S-transferase family protein (TAIR:AT5G45020.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 676.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_600.2","No alias","Porphyridium purpureum","(at1g75330 : 376.0) ornithine carbamoyltransferase (OTC); FUNCTIONS IN: amino acid binding, ornithine carbamoyltransferase activity, carboxyl- or carbamoyltransferase activity; INVOLVED IN: cellular amino acid metabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding (InterPro:IPR006132), Aspartate/ornithine carbamoyltransferase (InterPro:IPR006130), Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain (InterPro:IPR006131), Ornithine carbamoyltransferase (InterPro:IPR002292); BEST Arabidopsis thaliana protein match is: PYRIMIDINE B (TAIR:AT3G20330.1); Has 16793 Blast hits to 16793 proteins in 2905 species: Archae - 534; Bacteria - 11079; Metazoa - 203; Fungi - 280; Plants - 150; Viruses - 6; Other Eukaryotes - 4541 (source: NCBI BLink). & (q43814|otc_pea : 368.0) Ornithine carbamoyltransferase, chloroplast precursor (EC 2.1.3.3) (OTCase) (Ornithine transcarbamylase) - Pisum sativum (Garden pea) & (reliability: 752.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_611.17","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_628.2","No alias","Porphyridium purpureum","(at1g31860 : 80.1) encodes a bifunctional protein that has phosphoribosyl-ATP pyrophosphohydrolase (PRA-PH) and phosphoribosyl-AMP cyclohydrolase (PRA-CH) activities.; AT-IE; FUNCTIONS IN: phosphoribosyl-AMP cyclohydrolase activity, phosphoribosyl-ATP diphosphatase activity; INVOLVED IN: histidine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosyl-AMP cyclohydrolase (InterPro:IPR002496), Phosphoribosyl-ATP pyrophosphohydrolase (InterPro:IPR008179), Phosphoribosyl-ATP pyrophosphohydrolase-like (InterPro:IPR021130); Has 8084 Blast hits to 8082 proteins in 2164 species: Archae - 247; Bacteria - 4946; Metazoa - 2; Fungi - 173; Plants - 52; Viruses - 0; Other Eukaryotes - 2664 (source: NCBI BLink). & (reliability: 160.2) &  (original description: no original description)","protein_coding"
"evm.model.contig_666.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_667.2","No alias","Porphyridium purpureum","(at2g17200 : 216.0) DSK2; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquilin (InterPro:IPR015496), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: ubiquitin family protein (TAIR:AT2G17190.1); Has 15379 Blast hits to 7776 proteins in 854 species: Archae - 6; Bacteria - 3440; Metazoa - 5160; Fungi - 1735; Plants - 2506; Viruses - 174; Other Eukaryotes - 2358 (source: NCBI BLink). & (reliability: 432.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_683.2","No alias","Porphyridium purpureum","(at5g18640 : 102.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G18630.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 204.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_861.4","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding"
"evm.model.contig_865.2","No alias","Porphyridium purpureum","(at4g24730 : 105.0) Calcineurin-like metallo-phosphoesterase superfamily protein; FUNCTIONS IN: protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transporter, high affinity nitrate, Nar2 (InterPro:IPR016605); BEST Arabidopsis thaliana protein match is: nitrate transmembrane transporters (TAIR:AT5G50200.1). & (reliability: 210.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000025.30","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000037.23","No alias","Cyanophora paradoxa","(at1g17980 : 181.0) Encodes a poly(A) polymerase. Located in the nucleus.; poly(A) polymerase 1 (PAPS1); CONTAINS InterPro DOMAIN/s: Poly(A) polymerase (InterPro:IPR014492), Poly(A) polymerase, central domain (InterPro:IPR007012), Nucleotidyltransferase, class I, C-terminal-like (InterPro:IPR011068), Poly(A) polymerase, RNA-binding domain (InterPro:IPR007010); BEST Arabidopsis thaliana protein match is: poly(A) polymerase 2 (TAIR:AT2G25850.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 362.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000042.55","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000042.69","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000042.89","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000057.119","No alias","Cyanophora paradoxa","(at5g18230 : 174.0) transcription regulator NOT2/NOT3/NOT5 family protein; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: negative regulation of transcription, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NOT2/NOT3/NOT5 (InterPro:IPR007282), CCR4-NOT complex, subunit 3/ 5 (InterPro:IPR012270), Not CCR4-Not complex component, N-terminal (InterPro:IPR007207); BEST Arabidopsis thaliana protein match is: NOT2 / NOT3 / NOT5 family (TAIR:AT1G07705.2); Has 3972 Blast hits to 2940 proteins in 410 species: Archae - 18; Bacteria - 365; Metazoa - 1231; Fungi - 912; Plants - 255; Viruses - 11; Other Eukaryotes - 1180 (source: NCBI BLink). & (reliability: 348.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000057.20","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000057.31","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000057.43","No alias","Cyanophora paradoxa","(p31251|ube12_wheat : 840.0) Ubiquitin-activating enzyme E1 2 - Triticum aestivum (Wheat) & (at2g30110 : 820.0) Encodes a ubiquitin-activating enzyme (E1), involved in the first step in conjugating multiple ubiquitins to proteins targeted for degradation. Gene is expressed in most tissues examined. Mutant is able to revert the constitutive defense responses phenotype of snc1, which indicates the gene is involved in defense response. It also indicates that ubiquitination plays a role in plant defense signalling.; ubiquitin-activating enzyme 1 (UBA1); FUNCTIONS IN: ubiquitin-protein ligase activity, ubiquitin activating enzyme activity; INVOLVED IN: response to cadmium ion, response to other organism, protein ubiquitination, ubiquitin-dependent protein catabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-activating enzyme, E1, active site (InterPro:IPR018074), Ubiquitin-activating enzyme, E1 (InterPro:IPR018075), Ubiquitin-activating enzyme e1, C-terminal (InterPro:IPR018965), Ubiquitin-activating enzyme repeat (InterPro:IPR000127), Ubiquitin-activating enzyme (InterPro:IPR019572), UBA/THIF-type NAD/FAD binding fold (InterPro:IPR000594), Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), NAD(P)-binding domain (InterPro:IPR016040), Ubiquitin-activating enzyme, E1-like (InterPro:IPR000011); BEST Arabidopsis thaliana protein match is: ubiquitin activating enzyme 2 (TAIR:AT5G06460.1); Has 19490 Blast hits to 12603 proteins in 2346 species: Archae - 393; Bacteria - 11015; Metazoa - 2131; Fungi - 1366; Plants - 791; Viruses - 0; Other Eukaryotes - 3794 (source: NCBI BLink). & (reliability: 1640.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000073.31","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000093.117","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000093.138","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000093.140","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000093.192","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000093.213","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000113.18","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000113.42","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000113.48","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000114.45","No alias","Cyanophora paradoxa","(at4g25350 : 142.0) SHB1 encodes a nuclear and cytosolic protein that has motifs  homologous with SYG1 protein family members. Acts in cryptochrome signaling. Overexpression of SHB1 enhanced the expression of PHYTOCHROME-INTERACTING  FACTOR4 (PIF4) under red light and promoted proteasome-mediated degradation of phytochrome A and hypocotyl elongation under far-red light. A knockout allele suppressed LONG HYPOCOTYL IN FAR-RED LIGHT1 (HFR1) expression and showed several deetiolation  phenotypes. Acts upstream of HFR1. Regulates seed development.; SHORT HYPOCOTYL UNDER BLUE1 (SHB1); CONTAINS InterPro DOMAIN/s: EXS, C-terminal (InterPro:IPR004342), SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: EXS (ERD1/XPR1/SYG1) family protein (TAIR:AT1G35350.1); Has 1169 Blast hits to 1111 proteins in 205 species: Archae - 2; Bacteria - 6; Metazoa - 265; Fungi - 425; Plants - 309; Viruses - 0; Other Eukaryotes - 162 (source: NCBI BLink). & (reliability: 284.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000114.46","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000142.8","No alias","Cyanophora paradoxa"," (original description: no original description)","protein_coding"
"evm.model.tig00000144.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000144.151","No alias","Cyanophora paradoxa","(at1g62020 : 158.0) Coatomer, alpha subunit; FUNCTIONS IN: structural molecule activity, transporter activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport, ER to Golgi vesicle-mediated transport; LOCATED IN: COPI vesicle coat, plasma membrane, CUL4 RING ubiquitin ligase complex, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Coatomer, WD associated region (InterPro:IPR006692), WD40 repeat, conserved site (InterPro:IPR019775), Cytochrome cd1-nitrite reductase-like, C-terminal haem d1 (InterPro:IPR011048), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Coatomer, alpha subunit (InterPro:IPR016391), WD40 repeat, subgroup (InterPro:IPR019781), Coatomer, alpha subunit, C-terminal (InterPro:IPR010714); BEST Arabidopsis thaliana protein match is: Coatomer, alpha subunit (TAIR:AT2G21390.1); Has 77998 Blast hits to 29937 proteins in 781 species: Archae - 58; Bacteria - 8535; Metazoa - 32327; Fungi - 16718; Plants - 10020; Viruses - 0; Other Eukaryotes - 10340 (source: NCBI BLink). & (reliability: 316.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000144.155","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000144.166","No alias","Cyanophora paradoxa","(at3g12380 : 184.0) Encodes a gene similar to actin-related proteins in other organisms. Member of nuclear ARP gene family.; actin-related protein 5 (ARP5); CONTAINS InterPro DOMAIN/s: Actin/actin-like (InterPro:IPR004000); BEST Arabidopsis thaliana protein match is: Actin-like ATPase superfamily protein (TAIR:AT2G42100.1). & (p02581|act1_soybn : 93.6) Actin-1 - Glycine max (Soybean) & (reliability: 368.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000144.17","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000144.180","No alias","Cyanophora paradoxa","(at3g06580 : 315.0) Encodes a protein with galactose kinase activity. The gene was shown to complement the yeast Æ’gal1 mutant defective in the galactokinase gene GAL1.; GALK; FUNCTIONS IN: ATP binding, galactokinase activity; INVOLVED IN: galactose metabolic process, carbohydrate phosphorylation; LOCATED IN: cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GHMP kinase, ATP-binding, conserved site (InterPro:IPR006203), GHMP kinase (InterPro:IPR006204), Galactokinase (InterPro:IPR000705), Mevalonate/galactokinase (InterPro:IPR006206), Galactokinase galactose-binding domain (InterPro:IPR019539), Galactokinase, conserved site (InterPro:IPR019741), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), GHMP kinase, C-terminal (InterPro:IPR013750); BEST Arabidopsis thaliana protein match is: arabinose kinase (TAIR:AT4G16130.1); Has 4768 Blast hits to 4465 proteins in 1570 species: Archae - 210; Bacteria - 3137; Metazoa - 280; Fungi - 182; Plants - 144; Viruses - 0; Other Eukaryotes - 815 (source: NCBI BLink). & (reliability: 630.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000144.50","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000144.94","No alias","Cyanophora paradoxa","(at5g12350 : 97.1) Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain; FUNCTIONS IN: chromatin binding, zinc ion binding, Ran GTPase binding; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation, RCC1 (InterPro:IPR000408), Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591), Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Zinc finger, FYVE-type (InterPro:IPR000306), Zinc finger, FYVE-related (InterPro:IPR017455), Pleckstrin homology-type (InterPro:IPR011993), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain (TAIR:AT5G19420.1); Has 23773 Blast hits to 8858 proteins in 456 species: Archae - 73; Bacteria - 2346; Metazoa - 9625; Fungi - 1299; Plants - 3027; Viruses - 3; Other Eukaryotes - 7400 (source: NCBI BLink). & (reliability: 189.4) &  (original description: no original description)","protein_coding"
"evm.model.tig00000158.112","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000158.78","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000169.18","No alias","Cyanophora paradoxa","(at1g55250 : 113.0) Encodes one of two orthologous E3 ubiquitin ligases in Arabidopsis that are involved in monoubiquitination of histone H2B.; histone mono-ubiquitination 2 (HUB2); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: histone mono-ubiquitination 1 (TAIR:AT2G44950.1). & (reliability: 226.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000178.68","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000203.11","No alias","Cyanophora paradoxa","(at5g66680 : 405.0) Encodes a protein ortholog of human SOT48 or yeast WBP1, an essential protein subunit of the oligosaccharyltransferase (OST) complex, which is responsible for the transfer in the ER of the N-linked glycan precursor onto Asn residues of candidate proteins.; DEFECTIVE GLYCOSYLATION (DGL1); FUNCTIONS IN: dolichyl-diphosphooligosaccharide-protein glycotransferase activity; INVOLVED IN: plant-type cell wall organization, protein amino acid N-linked glycosylation via asparagine, unidimensional cell growth; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit (InterPro:IPR005013); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 810.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000203.18","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000204.20","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000204.62","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000215.57","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000219.45","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000227.44","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000254.32","No alias","Cyanophora paradoxa","(at5g52820 : 125.0) WD-40 repeat family protein / notchless protein, putative; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), NLE (InterPro:IPR012972), WD40 repeat (InterPro:IPR001680), G-protein, beta subunit (InterPro:IPR001632), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p25387|gblp_chlre : 100.0) Guanine nucleotide-binding protein subunit beta-like protein - Chlamydomonas reinhardtii & (reliability: 250.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000254.63","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000254.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000310.38","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000317.16","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000317.17","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000342.14","No alias","Cyanophora paradoxa","(at1g21980 : 133.0) Type I phosphatidylinositol-4-phosphate 5-kinase. Preferentially phosphorylates PtdIns4P. Induced by water stress and abscisic acid in Arabidopsis thaliana. Expressed in procambial cells of leaves, flowers and roots. A N-terminal Membrane Occupation and Recognition Nexus (MORN)affects enzyme activity and distribution.; phosphatidylinositol-4-phosphate 5-kinase 1 (PIP5K1); CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, plant (InterPro:IPR017163), MORN motif (InterPro:IPR003409), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: phosphatidylinositol-4-phosphate 5-kinase 2 (TAIR:AT1G77740.1); Has 28574 Blast hits to 7954 proteins in 630 species: Archae - 0; Bacteria - 3995; Metazoa - 4425; Fungi - 453; Plants - 2526; Viruses - 0; Other Eukaryotes - 17175 (source: NCBI BLink). & (q6ex42|pi5k1_orysa : 110.0) Phosphatidylinositol-4-phosphate 5-kinase 1 precursor (EC 2.7.1.68) (1-phosphatidylinositol-4-phosphate kinase) (PIP5K) (PtdIns(4)P-5-kinase) (Diphosphoinositide kinase) - Oryza sativa (Rice) & (reliability: 266.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000342.29","No alias","Cyanophora paradoxa","(at3g06910 : 121.0) Encodes a deSUMOylating enzyme. In vitro it has both peptidase activity and isopeptidase activity: it can cleave the C-terminal residues from SUMO to activate it for attachment to a target protein and it can also act on the isopeptide bond between SUMO and another protein. In vitro assays suggest that this enzyme is active against SUMO1 and SUMO2. It has weak activity with SUMO3 and cannot act on SUMO5. The N-terminal regulatory region of this protein is required for full activity.; UB-like protease 1A (ULP1A); CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT4G15880.1); Has 1394 Blast hits to 1393 proteins in 209 species: Archae - 0; Bacteria - 2; Metazoa - 593; Fungi - 272; Plants - 373; Viruses - 5; Other Eukaryotes - 149 (source: NCBI BLink). & (reliability: 242.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000350.28","No alias","Cyanophora paradoxa","(at5g67630 : 587.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: DNA helicase activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; LOCATED IN: nucleolus, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TIP49, C-terminal (InterPro:IPR010339), ATPase, AAA+ type, core (InterPro:IPR003593); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G49830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1174.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000350.9","No alias","Cyanophora paradoxa","(at2g25170 : 212.0) Encodes a SWI/SWF nuclear-localized chromatin remodeling factor of the CHD3 group. Involved in post-germination repression of embryonic development. Acts with GA to establish repression of embryonic genes upon germination. Protein preferentially accumulates in differentiating tissues. Loss of function alleles are associated with expression of embryonic traits in adult plants and derepression of embryonic genes such as PHEROS1.  Is an extragenic suppressor of slr2 (SSL2).  Mutations in PKL (SSL2) restores lateral root formation in the slr2 mutant slr-1.  It was proposed that PKL/SSL2-mediated chromatin remodeling negatively regulates auxin-mediated LR formation in Arabidopsis.; PICKLE (PKL); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1087 (InterPro:IPR009463), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Protein of unknown function DUF1086 (InterPro:IPR009462), Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor, putative (TAIR:AT4G31900.1); Has 20234 Blast hits to 17178 proteins in 1958 species: Archae - 161; Bacteria - 5176; Metazoa - 5098; Fungi - 4334; Plants - 1876; Viruses - 134; Other Eukaryotes - 3455 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 183.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 414.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000361.34","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000383.90","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000388.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000402.14","No alias","Cyanophora paradoxa","(at3g63480 : 115.0) ATP binding microtubule motor family protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: phragmoplast-associated kinesin-related protein 1 (TAIR:AT4G14150.1); Has 10148 Blast hits to 9733 proteins in 305 species: Archae - 0; Bacteria - 0; Metazoa - 4474; Fungi - 1347; Plants - 1834; Viruses - 0; Other Eukaryotes - 2493 (source: NCBI BLink). & (p46869|fla10_chlre : 107.0) Kinesin-like protein FLA10 (Protein KHP1) - Chlamydomonas reinhardtii & (reliability: 230.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000402.5","No alias","Cyanophora paradoxa","(at1g80400 : 97.8) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G26580.2); Has 10084 Blast hits to 10056 proteins in 295 species: Archae - 0; Bacteria - 8; Metazoa - 2540; Fungi - 826; Plants - 5176; Viruses - 44; Other Eukaryotes - 1490 (source: NCBI BLink). & (reliability: 195.6) &  (original description: no original description)","protein_coding"
"evm.model.tig00000404.23","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000404.35","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000411.23","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000430.55","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000441.17","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000455.31","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000459.29","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000459.30","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000475.20","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000480.31","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000489.13","No alias","Cyanophora paradoxa","(at5g60550 : 211.0) Encodes a geminivirus Rep interacting kinase (GRIK; GRIK1/AT3G45240, GRIK2/AT5G60550). GRIKs are SnRK1 (SNF1-related kinases) activating kinases. Both GRIKs specifically bind to the SnRK1 catalytic subunit and phosphorylate the equivalent threonine residue in its activation loop in vitro.; geminivirus rep interacting kinase 2 (GRIK2); CONTAINS InterPro DOMAIN/s: Calcium/calmodulin-dependent protein kinase kinase (InterPro:IPR020657), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: geminivirus rep interacting kinase 1 (TAIR:AT3G45240.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 124.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 422.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000492.78","No alias","Cyanophora paradoxa","(at3g12580 : 158.0) heat shock protein 70 (HSP70); FUNCTIONS IN: ATP binding; INVOLVED IN: in 9 processes; LOCATED IN: cytosol, mitochondrion, cell wall, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock cognate protein 70-1 (TAIR:AT5G02500.1); Has 34126 Blast hits to 33731 proteins in 4830 species: Archae - 159; Bacteria - 16481; Metazoa - 3906; Fungi - 1752; Plants - 1258; Viruses - 310; Other Eukaryotes - 10260 (source: NCBI BLink). & (p09189|hsp7c_pethy : 156.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (reliability: 316.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000498.39","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000498.80","No alias","Cyanophora paradoxa","(q9zsv1|parp1_maize : 162.0) Poly [ADP-ribose] polymerase 1 (EC 2.4.2.30) (PARP-1) (ADPRT 1) (NAD(+) ADP-ribosyltransferase 1) (Poly[ADP-ribose] synthetase 1) - Zea mays (Maize) & (at2g31320 : 158.0) Abiotic Stress-inducible gene.; poly(ADP-ribose) polymerase 2 (PARP2); FUNCTIONS IN: NAD+ ADP-ribosyltransferase activity, NAD or NADH binding, DNA binding, zinc ion binding; INVOLVED IN: DNA repair, response to oxidative stress, response to abscisic acid stimulus, protein amino acid ADP-ribosylation, response to abiotic stimulus; LOCATED IN: intracellular, nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: PADR1 (InterPro:IPR012982), Zinc finger, PARP-type (InterPro:IPR001510), WGR (InterPro:IPR008893), Poly(ADP-ribose) polymerase, regulatory domain (InterPro:IPR004102), NAD+ ADP-ribosyltransferase (InterPro:IPR008288), Poly(ADP-ribose) polymerase, catalytic domain (InterPro:IPR012317), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: NAD+ ADP-ribosyltransferases;NAD+ ADP-ribosyltransferases (TAIR:AT5G22470.1); Has 1243 Blast hits to 1018 proteins in 163 species: Archae - 0; Bacteria - 14; Metazoa - 746; Fungi - 100; Plants - 173; Viruses - 2; Other Eukaryotes - 208 (source: NCBI BLink). & (reliability: 316.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000507.19","No alias","Cyanophora paradoxa","(at3g59950 : 109.0) Peptidase family C54 protein; FUNCTIONS IN: peptidase activity; INVOLVED IN: autophagy; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C54 (InterPro:IPR005078); BEST Arabidopsis thaliana protein match is: Peptidase family C54 protein (TAIR:AT2G44140.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 218.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000552.22","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000615.18","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000615.29","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000615.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000615.74","No alias","Cyanophora paradoxa","(at2g41210 : 159.0) Encodes a protein with phosphatidylinositol-4-phosphate 5-kinase activity that plays a role in pollen tip growth. The enzyme localizes to the apical plasma membrane and adjacent cytosolic region of pollen tubes. Overexpression of this gene leads to increased deposition of pectin in the cell wall at the tip of the pollen tube and causes altered pollen tube morphology.; phosphatidylinositol- 4-phosphate 5-kinase 5 (PIP5K5); CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, plant (InterPro:IPR017163), MORN motif (InterPro:IPR003409), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: phosphatidyl inositol monophosphate 5 kinase 4 (TAIR:AT3G56960.1); Has 28370 Blast hits to 7831 proteins in 606 species: Archae - 2; Bacteria - 4383; Metazoa - 4412; Fungi - 450; Plants - 2408; Viruses - 2; Other Eukaryotes - 16713 (source: NCBI BLink). & (q6ex42|pi5k1_orysa : 155.0) Phosphatidylinositol-4-phosphate 5-kinase 1 precursor (EC 2.7.1.68) (1-phosphatidylinositol-4-phosphate kinase) (PIP5K) (PtdIns(4)P-5-kinase) (Diphosphoinositide kinase) - Oryza sativa (Rice) & (reliability: 318.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000615.78","No alias","Cyanophora paradoxa","(at1g29150 : 404.0) specifically interacts with FUS6/COP11 via the C-terminal domain of FUS6/COP11 and associates with an ATPase subunit of the 19S proteasome regulatory complex, AtS6A.; non-ATPase subunit 9 (ATS9); INVOLVED IN: response to cadmium ion, protein catabolic process, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome complex, nucleus, proteasome regulatory particle, lid subcomplex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Proteasome component (PCI) domain (InterPro:IPR000717), PCI/PINT associated module (InterPro:IPR013143); BEST Arabidopsis thaliana protein match is: proteasome family protein (TAIR:AT2G26990.1); Has 870 Blast hits to 851 proteins in 238 species: Archae - 0; Bacteria - 2; Metazoa - 296; Fungi - 224; Plants - 209; Viruses - 0; Other Eukaryotes - 139 (source: NCBI BLink). & (reliability: 808.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000622.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000691.16","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000691.30","No alias","Cyanophora paradoxa","(at3g07720 : 97.4) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: nitrile specifier protein 5 (TAIR:AT5G48180.1); Has 10920 Blast hits to 5857 proteins in 349 species: Archae - 8; Bacteria - 366; Metazoa - 5368; Fungi - 1057; Plants - 2178; Viruses - 16; Other Eukaryotes - 1927 (source: NCBI BLink). & (reliability: 194.8) &  (original description: no original description)","protein_coding"
"evm.model.tig00000691.38","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000691.5","No alias","Cyanophora paradoxa","(at5g56900 : 124.0) CwfJ-like family protein / zinc finger (CCCH-type) family protein; FUNCTIONS IN: zinc ion binding, catalytic activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Histidine triad-like motif (InterPro:IPR011146), Cwf19-like, C-terminal domain-1 (InterPro:IPR006768), Cwf19-like protein, C-terminal domain-2 (InterPro:IPR006767); BEST Arabidopsis thaliana protein match is: CwfJ-like family protein (TAIR:AT1G56290.1); Has 929 Blast hits to 786 proteins in 187 species: Archae - 0; Bacteria - 11; Metazoa - 341; Fungi - 367; Plants - 103; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (reliability: 248.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000692.82","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000704.40","No alias","Cyanophora paradoxa","(at2g20330 : 340.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: TBP-associated factor 5 (TAIR:AT5G25150.1); Has 32306 Blast hits to 19564 proteins in 654 species: Archae - 48; Bacteria - 6195; Metazoa - 11628; Fungi - 6530; Plants - 3814; Viruses - 23; Other Eukaryotes - 4068 (source: NCBI BLink). & (reliability: 680.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000704.52","No alias","Cyanophora paradoxa","(at2g32920 : 121.0) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). AtIRE1-2 does not appear to be required for this response, but the atbzip60 mutant has a diminished response.; PDI-like 2-3 (PDIL2-3); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: response to endoplasmic reticulum stress; LOCATED IN: endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Disulphide isomerase (InterPro:IPR005788), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 2-2 (TAIR:AT1G04980.1); Has 34824 Blast hits to 18409 proteins in 2879 species: Archae - 382; Bacteria - 17291; Metazoa - 5423; Fungi - 1895; Plants - 2648; Viruses - 40; Other Eukaryotes - 7145 (source: NCBI BLink). & (p38661|pdia6_medsa : 97.4) Probable protein disulfide-isomerase A6 precursor (EC 5.3.4.1) (P5) - Medicago sativa (Alfalfa) & (reliability: 242.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000711.5","No alias","Cyanophora paradoxa","(at1g78070 : 428.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G36070.1); Has 25796 Blast hits to 12397 proteins in 585 species: Archae - 64; Bacteria - 7254; Metazoa - 7661; Fungi - 5235; Plants - 2447; Viruses - 0; Other Eukaryotes - 3135 (source: NCBI BLink). & (reliability: 846.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000737.28","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000767.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000789.13","No alias","Cyanophora paradoxa","(at4g03200 : 377.0) catalytics; FUNCTIONS IN: catalytic activity; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF255 (InterPro:IPR004879), Six-hairpin glycosidase-like (InterPro:IPR008928), Thioredoxin-like fold (InterPro:IPR012336); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 754.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000792.68","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000802.47","No alias","Cyanophora paradoxa","(at4g19006 : 151.0) Proteasome component (PCI) domain protein; CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717); BEST Arabidopsis thaliana protein match is: Proteasome component (PCI) domain protein (TAIR:AT5G45620.1); Has 1087 Blast hits to 1083 proteins in 229 species: Archae - 0; Bacteria - 0; Metazoa - 564; Fungi - 232; Plants - 168; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink). & (reliability: 302.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000806.38","No alias","Cyanophora paradoxa","(p51824|arf1_soltu : 223.0) ADP-ribosylation factor 1 - Solanum tuberosum (Potato) & (at1g70490 : 217.0) A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to other ARFs and ARF-like proteins. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct.; ARFA1D; FUNCTIONS IN: phospholipase activator activity, GTP binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), Small GTP-binding protein (InterPro:IPR005225), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor 1 (TAIR:AT1G23490.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 434.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000808.36","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000808.45","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000808.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000821.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000828.17","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000829.3","No alias","Cyanophora paradoxa","(at3g44340 : 410.0) homologous to yeast and animal Sec24 proteins; expression in yeast cells enhances their survival under oxidative stress conditions.; clone eighty-four (CEF); FUNCTIONS IN: transporter activity, zinc ion binding; INVOLVED IN: response to oxidative stress, vesicle-mediated transport; LOCATED IN: COPII vesicle coat, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sec23/Sec24, helical domain (InterPro:IPR006900), Sec23/Sec24 beta-sandwich (InterPro:IPR012990), Sec23/Sec24, trunk domain (InterPro:IPR006896), Zinc finger, Sec23/Sec24-type (InterPro:IPR006895), Gelsolin domain (InterPro:IPR007123); BEST Arabidopsis thaliana protein match is: Sec23/Sec24 protein transport family protein (TAIR:AT4G32640.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 820.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000829.30","No alias","Cyanophora paradoxa","(at5g18700 : 628.0) Encodes a microtubule-associated kinase-like protein RUNKEL (RUK). Contains a putative serine/threonine kinase domain and a microtubule-binding domain. RUK directly binds to microtubules in vitro and colocalizes with mitotic preprophase band, spindle, and phragmoplast in vivo.  Required for cell plate expansion in cytokinesis.; Protein kinase family protein with ARM repeat domain; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Armadillo-like helical (InterPro:IPR011989), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G33940.2); Has 133671 Blast hits to 131461 proteins in 4761 species: Archae - 230; Bacteria - 15366; Metazoa - 49337; Fungi - 13216; Plants - 32681; Viruses - 728; Other Eukaryotes - 22113 (source: NCBI BLink). & (q7y0b9|sapk8_orysa : 131.0) Serine/threonine-protein kinase SAPK8 (EC 2.7.11.1) (Osmotic stress/abscisic acid-activated protein kinase 8) - Oryza sativa (Rice) & (reliability: 1256.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000829.5","No alias","Cyanophora paradoxa","(at3g18520 : 128.0) Encodes a protein with similarity to histone deacetylases. Plants expressing RNAi directed against this gene show a moderate resistance to agrobacterium-mediated root transformation.; histone deacetylase 15 (HDA15); FUNCTIONS IN: histone deacetylase activity; INVOLVED IN: DNA mediated transformation, histone deacetylation; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876), Histone deacetylase superfamily (InterPro:IPR000286); BEST Arabidopsis thaliana protein match is: histone deacetylase 5 (TAIR:AT5G61060.1); Has 9308 Blast hits to 9105 proteins in 1476 species: Archae - 223; Bacteria - 3234; Metazoa - 1500; Fungi - 655; Plants - 551; Viruses - 0; Other Eukaryotes - 3145 (source: NCBI BLink). & (p56521|hdac_maize : 87.0) Probable histone deacetylase (RPD3 homolog) - Zea mays (Maize) & (reliability: 256.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000841.8","No alias","Cyanophora paradoxa","(at1g77740 : 128.0) Encodes PIP5K2, a phosphatidylinositol-4-phosphate 5-kinase (PtdIns(4)P 5-kinase 2; or PIP5K2).; phosphatidylinositol-4-phosphate 5-kinase 2 (PIP5K2); CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, plant (InterPro:IPR017163), MORN motif (InterPro:IPR003409), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: phosphatidylinositol-4-phosphate 5-kinase 1 (TAIR:AT1G21980.1); Has 28568 Blast hits to 7904 proteins in 613 species: Archae - 0; Bacteria - 4095; Metazoa - 4135; Fungi - 445; Plants - 2701; Viruses - 0; Other Eukaryotes - 17192 (source: NCBI BLink). & (q6ex42|pi5k1_orysa : 120.0) Phosphatidylinositol-4-phosphate 5-kinase 1 precursor (EC 2.7.1.68) (1-phosphatidylinositol-4-phosphate kinase) (PIP5K) (PtdIns(4)P-5-kinase) (Diphosphoinositide kinase) - Oryza sativa (Rice) & (reliability: 256.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000842.27","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000851.22","No alias","Cyanophora paradoxa","(at4g16210 : 80.9) enoyl-CoA hydratase/isomerase A (ECHIA); FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: enoyl-CoA hydratase/isomerase D (TAIR:AT1G60550.1); Has 36619 Blast hits to 36609 proteins in 2298 species: Archae - 475; Bacteria - 23840; Metazoa - 1646; Fungi - 934; Plants - 612; Viruses - 0; Other Eukaryotes - 9112 (source: NCBI BLink). & (reliability: 161.8) &  (original description: no original description)","protein_coding"
"evm.model.tig00000865.44","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000865.6","No alias","Cyanophora paradoxa","(at2g44100 : 248.0) GDP dissociation inhibitor involved in vesicular membrane traffic; guanosine nucleotide diphosphate dissociation inhibitor 1 (GDI1); CONTAINS InterPro DOMAIN/s: Rab GTPase activator (InterPro:IPR002005), GDP dissociation inhibitor (InterPro:IPR018203), Rab GDI protein (InterPro:IPR000806); BEST Arabidopsis thaliana protein match is: RAB GDP dissociation inhibitor 2 (TAIR:AT3G59920.1); Has 1320 Blast hits to 1214 proteins in 252 species: Archae - 2; Bacteria - 0; Metazoa - 653; Fungi - 281; Plants - 182; Viruses - 0; Other Eukaryotes - 202 (source: NCBI BLink). & (reliability: 496.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000880.13","No alias","Cyanophora paradoxa","(at4g15900 : 448.0) Mutations confer hypersensitivity to glucose and sucrose and augments sensitivity to cytokinin, ethylene, ABA and auxin. Encodes a nuclear  WD40 protein that is imported into the nucleus.  Essential for plant innate immunity.  Interacts with MOS4 and AtCDC5. It is also predicted to have two DWD motifs. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase, and may affect the stability of AKIN10.; pleiotropic regulatory locus 1 (PRL1); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G16650.1); Has 84704 Blast hits to 34179 proteins in 878 species: Archae - 64; Bacteria - 9610; Metazoa - 34201; Fungi - 18356; Plants - 10881; Viruses - 0; Other Eukaryotes - 11592 (source: NCBI BLink). & (p93107|pf20_chlre : 106.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 862.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000880.19","No alias","Cyanophora paradoxa","(at4g03430 : 278.0) Encodes a nuclear protein similar to the human U5 small ribonucleoprotein-associated 102-kD protein and to the yeast pre-mRNA splicing factors Prp1p and Prp6p. STA1 expression is upregulated by cold stress, and the sta1-1 mutant is defective in the splicing of the cold-induced COR15A gene. Luciferase imaging was used to isolate a recessive mutant, sta1-1, with enhanced stability of the normally unstable luciferase transcript. This mutation also causes the stabilization of some endogenous gene transcripts and has a range of developmental and stress response phenotypes.; EMBRYO DEFECTIVE 2770 (EMB2770); FUNCTIONS IN: binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome, response to cold, response to abiotic stimulus; LOCATED IN: nucleus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix (InterPro:IPR003107), Tetratricopeptide-like helical (InterPro:IPR011990), PRP1 splicing factor, N-terminal (InterPro:IPR010491), Ubiquitin supergroup (InterPro:IPR019955), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: beta-galactosidase 14 (TAIR:AT4G38590.1); Has 3874 Blast hits to 2098 proteins in 386 species: Archae - 98; Bacteria - 366; Metazoa - 1194; Fungi - 916; Plants - 656; Viruses - 0; Other Eukaryotes - 644 (source: NCBI BLink). & (reliability: 556.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000880.53","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000880.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000880.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000881.32","No alias","Cyanophora paradoxa","(at2g04750 : 295.0) Actin binding Calponin homology (CH) domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715); BEST Arabidopsis thaliana protein match is: fimbrin-like protein 2 (TAIR:AT5G35700.1); Has 4258 Blast hits to 2703 proteins in 202 species: Archae - 0; Bacteria - 4; Metazoa - 3436; Fungi - 331; Plants - 148; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 590.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000889.35","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000893.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000900.36","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000903.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000912.17","No alias","Cyanophora paradoxa","(at5g06160 : 337.0) Encodes a protein with similarity to pre-mRNA splicing factor SF3a60 that is involved in gametic cell fate determination. Loss of function results in the ectopic expression of egg cell makers suggesting a role in restriction of gametic cell fate.  Expressed strongly in gametophytes and weakly in sporophytes.; ATROPOS (ATO); FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of embryo sac egg cell differentiation; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type matrin (InterPro:IPR000690), Splicing factor SF3a60 binding domain (InterPro:IPR021966); Has 679 Blast hits to 673 proteins in 216 species: Archae - 0; Bacteria - 0; Metazoa - 330; Fungi - 136; Plants - 106; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (reliability: 674.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000912.27","No alias","Cyanophora paradoxa","(at1g73450 : 451.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G73460.1); Has 91653 Blast hits to 89873 proteins in 2996 species: Archae - 91; Bacteria - 10272; Metazoa - 34556; Fungi - 12029; Plants - 16764; Viruses - 383; Other Eukaryotes - 17558 (source: NCBI BLink). & (q5zci1|mpk10_orysa : 127.0) Mitogen-activated protein kinase 10 (EC 2.7.11.24) (MAP kinase 10) - Oryza sativa (Rice) & (reliability: 902.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000940.4","No alias","Cyanophora paradoxa","(at5g26010 : 119.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root, leaf; EXPRESSED DURING: LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT4G32950.1); Has 6065 Blast hits to 6055 proteins in 312 species: Archae - 2; Bacteria - 39; Metazoa - 1411; Fungi - 761; Plants - 2573; Viruses - 5; Other Eukaryotes - 1274 (source: NCBI BLink). & (reliability: 238.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000944.31","No alias","Cyanophora paradoxa","(at3g58460 : 112.0) RHOMBOID-like protein 15 (RBL15); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: RHOMBOID-like protein 14 (TAIR:AT3G17611.1). & (reliability: 224.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000944.6","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000955.23","No alias","Cyanophora paradoxa","(at5g46070 : 172.0) Guanylate-binding family protein; FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: immune response; LOCATED IN: nucleolus, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Guanylate-binding protein, N-terminal (InterPro:IPR015894), Guanylate-binding protein, C-terminal (InterPro:IPR003191); BEST Arabidopsis thaliana protein match is: guanylate-binding family protein (TAIR:AT1G03830.2); Has 135716 Blast hits to 74856 proteins in 3470 species: Archae - 1642; Bacteria - 27962; Metazoa - 58309; Fungi - 11332; Plants - 7596; Viruses - 496; Other Eukaryotes - 28379 (source: NCBI BLink). & (reliability: 344.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000989.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001003.31","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001024.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001024.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001024.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001030.19","No alias","Cyanophora paradoxa","(at3g04240 : 99.0) Has O-linked N-acetyl glucosamine transferase activity. Similar to Arabidopsis SPY gene.; secret agent (SEC); CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G11540.1); Has 114710 Blast hits to 35863 proteins in 2480 species: Archae - 3197; Bacteria - 54774; Metazoa - 16661; Fungi - 4580; Plants - 3873; Viruses - 0; Other Eukaryotes - 31625 (source: NCBI BLink). & (reliability: 198.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001030.25","No alias","Cyanophora paradoxa","(o23732|gshb_braju : 126.0) Glutathione synthetase, chloroplast precursor (EC 6.3.2.3) (Glutathione synthase) (GSH synthetase) (GSH-S) - Brassica juncea (Leaf mustard) (Indian mustard) & (at5g27380 : 122.0) Encodes a protein with similarity to glutathione synthetases, which catalyzes one of the early steps in glutathione biosynthesis. Two transcripts have been detected; the longer transcript is less abundant and the protein is localized to the chloroplast. The smaller transcript, in which the transit peptide is truncated, is localized to the cytosol.; glutathione synthetase 2 (GSH2); FUNCTIONS IN: glutathione synthase activity; INVOLVED IN: response to jasmonic acid stimulus, N-terminal protein myristoylation, glutathione biosynthetic process; LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PreATP-grasp-like fold (InterPro:IPR016185), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Glutathione synthase, eukaryotic (InterPro:IPR005615), Glutathione synthase, substrate-binding, eukaryotic (InterPro:IPR004887), Glutathione synthase, alpha-helical, eukaryotic (InterPro:IPR014042); Has 644 Blast hits to 607 proteins in 239 species: Archae - 0; Bacteria - 51; Metazoa - 212; Fungi - 156; Plants - 112; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (reliability: 244.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001049.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001065.16","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001065.36","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001067.25","No alias","Cyanophora paradoxa","(at1g77680 : 337.0) Ribonuclease II/R family protein; FUNCTIONS IN: ribonuclease activity, RNA binding; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease II/R (InterPro:IPR001900); BEST Arabidopsis thaliana protein match is: ribonuclease II family protein (TAIR:AT2G17510.1); Has 8235 Blast hits to 8065 proteins in 2328 species: Archae - 43; Bacteria - 5411; Metazoa - 476; Fungi - 391; Plants - 139; Viruses - 2; Other Eukaryotes - 1773 (source: NCBI BLink). & (reliability: 674.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001067.31","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001067.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001073.11","No alias","Cyanophora paradoxa","(at3g27325 : 118.0) hydrolases, acting on ester bonds; FUNCTIONS IN: hydrolase activity, acting on ester bonds; INVOLVED IN: intracellular protein transport, GPI anchor metabolic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: PGAP1-like (InterPro:IPR012908). & (reliability: 236.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001085.33","No alias","Cyanophora paradoxa","(at3g54610 : 130.0) Encodes a histone acetyltransferase that is plays a role in the determination of the embryonic root-shoot axis.  It is also required to regulate the floral meristem activity by modulating the extent of expression of WUS and AG.  In other eukaryotes, this protein is recruited to specific promoters by DNA binding transcription factors and is thought to promote transcription by acetylating the N-terminal tail of histone H3. The enzyme has indeed been shown to catalyse primarily the acetylation of H3 histone with only traces of H4 and H2A/B being acetylated. Non-acetylated H3 peptide or an H3 peptide that had been  previously acetylated on K9 both serve as excellent substrates  for HAG1-catalyzed acetylation. However, prior acetylation  of H3 lysine 14 blocks radioactive acetylation of the  peptide by HAG1.  HAG1 is specific for  histone H3 lysine 14.; histone acetyltransferase of the GNAT family 1 (HAG1); FUNCTIONS IN: histone acetyltransferase activity, DNA binding, H3 histone acetyltransferase activity; INVOLVED IN: flower development, histone acetylation, response to light stimulus, positive regulation of transcription, root morphogenesis; LOCATED IN: histone acetyltransferase complex, nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Bromodomain, conserved site (InterPro:IPR018359), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: nuclear protein X1 (TAIR:AT5G63320.1); Has 13698 Blast hits to 5805 proteins in 367 species: Archae - 4; Bacteria - 1437; Metazoa - 4852; Fungi - 1484; Plants - 516; Viruses - 1; Other Eukaryotes - 5404 (source: NCBI BLink). & (reliability: 260.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001085.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001098.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001126.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001155.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001206.15","No alias","Cyanophora paradoxa","(at5g28740 : 754.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: RNA processing; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix (InterPro:IPR003107), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: crooked neck protein, putative / cell cycle protein, putative (TAIR:AT5G45990.1); Has 2811 Blast hits to 1455 proteins in 237 species: Archae - 16; Bacteria - 22; Metazoa - 987; Fungi - 875; Plants - 477; Viruses - 0; Other Eukaryotes - 434 (source: NCBI BLink). & (reliability: 1508.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001206.22","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001206.30","No alias","Cyanophora paradoxa"," (original description: no original description)","protein_coding"
"evm.model.tig00001208.17","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001214.17","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001229.23","No alias","Cyanophora paradoxa","(at1g80350 : 151.0) encodes a p60 katanin protein that is expressed throughout  the plant.  Required for the specification of cell fates from early in development (in the meristem)  through differentiation and for normal postmitotic organization of cortical microtubules into transverse arrays in root epidermis cells. Mutants display cytoskeletal defects.; ECTOPIC ROOT HAIR 3 (ERH3); FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: trichome branching, cortical microtubule organization, multidimensional cell growth, plant-type cell wall biogenesis, microtubule cytoskeleton organization; LOCATED IN: katanin complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960), Vps4 oligomerisation, C-terminal (InterPro:IPR015415); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G34560.1); Has 31677 Blast hits to 29370 proteins in 3124 species: Archae - 1478; Bacteria - 12054; Metazoa - 4742; Fungi - 3292; Plants - 2928; Viruses - 23; Other Eukaryotes - 7160 (source: NCBI BLink). & (reliability: 302.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001234.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001234.10","No alias","Cyanophora paradoxa","(at2g43790 : 294.0) Encodes a MAP kinase induced by pathogens, ethylene biosynthesis, oxidative stress and osmotic stress.Also involved in ovule development. Homozygous mutants in a MPK3 heterozygous background are female sterile due to defects in integument development.MPK6 appears to be associated with the microsomal compartment and may be involved in mediating secretory processes.; MAP kinase 6 (MPK6); FUNCTIONS IN: MAP kinase activity, kinase activity; INVOLVED IN: in 20 processes; LOCATED IN: trans-Golgi network, preprophase band, phragmoplast; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), JNK MAP kinase (InterPro:IPR008351), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase 3 (TAIR:AT3G45640.1); Has 124968 Blast hits to 123484 proteins in 4565 species: Archae - 94; Bacteria - 13025; Metazoa - 47222; Fungi - 12634; Plants - 30512; Viruses - 574; Other Eukaryotes - 20907 (source: NCBI BLink). & (q6z437|mpk3_orysa : 293.0) Mitogen-activated protein kinase 3 (EC 2.7.11.24) (MAP kinase 3) (OsMAP3) (MAP kinase 2) (OsMAPK2) - Oryza sativa (Rice) & (reliability: 534.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001234.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001254.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001264.17","No alias","Cyanophora paradoxa","(at3g20800 : 402.0) Cell differentiation, Rcd1-like protein; CONTAINS InterPro DOMAIN/s: Cell differentiation, Rcd1-like (InterPro:IPR007216); BEST Arabidopsis thaliana protein match is: Cell differentiation, Rcd1-like protein (TAIR:AT5G12980.1); Has 491 Blast hits to 488 proteins in 205 species: Archae - 0; Bacteria - 0; Metazoa - 160; Fungi - 135; Plants - 110; Viruses - 0; Other Eukaryotes - 86 (source: NCBI BLink). & (reliability: 804.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001265.16","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001286.4","No alias","Cyanophora paradoxa","(at1g18610 : 89.7) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch repeat type 2 (InterPro:IPR011498), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G74150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 168.6) &  (original description: no original description)","protein_coding"
"evm.model.tig00001286.6","No alias","Cyanophora paradoxa","(at1g62740 : 376.0) stress-inducible protein, putative; FUNCTIONS IN: binding; INVOLVED IN: response to cadmium ion, response to stress; LOCATED IN: cytosol, nucleus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: stress-inducible protein, putative (TAIR:AT1G12270.1); Has 44605 Blast hits to 18649 proteins in 1479 species: Archae - 1696; Bacteria - 14533; Metazoa - 9820; Fungi - 2891; Plants - 3854; Viruses - 4; Other Eukaryotes - 11807 (source: NCBI BLink). & (q43468|stip_soybn : 317.0) Heat shock protein STI (Stress-inducible protein) (GmSTI) - Glycine max (Soybean) & (reliability: 752.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001292.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001310.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001336.10","No alias","Cyanophora paradoxa","(at2g43160 : 165.0) ENTH/VHS family protein; FUNCTIONS IN: binding; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epsin, N-terminal (InterPro:IPR001026), Epsin-like, N-terminal (InterPro:IPR013809), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/VHS family protein (TAIR:AT3G59290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 330.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001366.9","No alias","Cyanophora paradoxa","(at1g22940 : 111.0) Encodes a bifunctional enzyme required for thiamine (vitamin B1) biosynthesis. TH1 can phosphorylate HMP-P to produce HMP-PP, the pyrimidine heterocyclic subunit of thiamine. TH1 also catalyzes the condensation of HMP-PP and HET to form thiamine monophosphate (TMP). TH1 also appears capable of phosphorylating HMP based on E.coli mutant complementation assays. th1 mutants are thiamine auxotrophs that die as seedlings on unsupplemented media.; THIAMINE REQUIRING 1 (TH1); FUNCTIONS IN: phosphomethylpyrimidine kinase activity, thiamin-phosphate diphosphorylase activity, hydroxymethylpyrimidine kinase activity; INVOLVED IN: thiamin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiamine monophosphate synthase (InterPro:IPR003733), Phosphomethylpyrimidine kinase type-2 (InterPro:IPR004399), Aldolase-type TIM barrel (InterPro:IPR013785), Phosphomethylpyrimidine kinase type-1 (InterPro:IPR013749); Has 15989 Blast hits to 15891 proteins in 2548 species: Archae - 338; Bacteria - 12149; Metazoa - 165; Fungi - 331; Plants - 107; Viruses - 0; Other Eukaryotes - 2899 (source: NCBI BLink). & (reliability: 222.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001373.6","No alias","Cyanophora paradoxa","(at5g48960 : 101.0) HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase; FUNCTIONS IN: 5'-nucleotidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase (InterPro:IPR008380); BEST Arabidopsis thaliana protein match is: HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase (TAIR:AT1G75210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 191.8) &  (original description: no original description)","protein_coding"
"evm.model.tig00001376.21","No alias","Cyanophora paradoxa","(at5g11200 : 84.7) DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: male gametophyte, guard cell, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box RNA helicase family protein  (TAIR:AT5G11170.1); Has 43305 Blast hits to 42684 proteins in 3065 species: Archae - 845; Bacteria - 22038; Metazoa - 6141; Fungi - 4560; Plants - 2670; Viruses - 60; Other Eukaryotes - 6991 (source: NCBI BLink). & (reliability: 169.4) &  (original description: no original description)","protein_coding"
"evm.model.tig00001424.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001487.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001537.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001545.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001574.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001604.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020510.44","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020510.45","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020510.91","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020510.94","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020515.5","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020531.35","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020531.50","No alias","Cyanophora paradoxa","(at3g49660 : 148.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: G-protein coupled receptor protein signaling pathway; LOCATED IN: chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G02730.1); Has 118516 Blast hits to 43755 proteins in 1024 species: Archae - 92; Bacteria - 12360; Metazoa - 47439; Fungi - 25856; Plants - 15887; Viruses - 9; Other Eukaryotes - 16873 (source: NCBI BLink). & (p93107|pf20_chlre : 144.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 288.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020538.63","No alias","Cyanophora paradoxa","(p37116|ncpr_phaau : 234.0) NADPH--cytochrome P450 reductase (EC 1.6.2.4) (CPR) (P450R) - Phaseolus aureus (Mung bean) (Vigna radiata) & (at4g30210 : 226.0) Encodes NADPH-cytochrome P450 reductase that catalyzes the first oxidative step of the phenylpropanoid general pathway.; P450 reductase 2 (ATR2); FUNCTIONS IN: NADPH-hemoprotein reductase activity; INVOLVED IN: phenylpropanoid metabolic process; LOCATED IN: endoplasmic reticulum, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Flavodoxin/nitric oxide synthase (InterPro:IPR008254), Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), FAD-binding, type 1 (InterPro:IPR003097), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), NADPH Cytochrome P450 Reductase (InterPro:IPR015702); BEST Arabidopsis thaliana protein match is: P450 reductase 1 (TAIR:AT4G24520.1); Has 6728 Blast hits to 6356 proteins in 1574 species: Archae - 5; Bacteria - 3354; Metazoa - 1038; Fungi - 894; Plants - 570; Viruses - 0; Other Eukaryotes - 867 (source: NCBI BLink). & (reliability: 452.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020538.9","No alias","Cyanophora paradoxa","(at2g45620 : 129.0) Nucleotidyltransferase family protein; FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleotidyl transferase domain (InterPro:IPR002934), PAP/25A-associated (InterPro:IPR002058); BEST Arabidopsis thaliana protein match is: Nucleotidyltransferase family protein (TAIR:AT3G45750.1); Has 1962 Blast hits to 1846 proteins in 232 species: Archae - 0; Bacteria - 9; Metazoa - 921; Fungi - 372; Plants - 185; Viruses - 0; Other Eukaryotes - 475 (source: NCBI BLink). & (reliability: 258.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020544.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020552.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020553.132","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020553.144","No alias","Cyanophora paradoxa","(q8li34|myst1_orysa : 436.0) Putative MYST-like histone acetyltransferase 1 (EC 2.3.1.48) - Oryza sativa (Rice) & (at5g64610 : 435.0) Encodes an enzyme with histone acetyltransferase activity. HAM1 primarily acetylate histone H4, but also  display some ability to acetylate H3. Prior acetylation of lysine 5 on histone H4  reduces radioactive acetylation by either HAM1. HAM1 acetylates histone H4 lysine 5.; histone acetyltransferase of the MYST family 1 (HAM1); FUNCTIONS IN: histone acetyltransferase activity, zinc ion binding, nucleic acid binding; INVOLVED IN: chromatin assembly or disassembly, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Chromo domain (InterPro:IPR000953), MOZ/SAS-like protein (InterPro:IPR002717); BEST Arabidopsis thaliana protein match is: histone acetyltransferase of the MYST family 2 (TAIR:AT5G09740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 870.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020553.156","No alias","Cyanophora paradoxa","(at4g31480 : 943.0) Coatomer, beta subunit; FUNCTIONS IN: clathrin binding, structural molecule activity, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: membrane coat, COPI vesicle coat; EXPRESSED IN: male gametophyte, guard cell; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Coatomer, beta subunit, C-terminal (InterPro:IPR011710), Armadillo-like helical (InterPro:IPR011989), Coatomer, beta subunit (InterPro:IPR016460), Armadillo-type fold (InterPro:IPR016024), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553); BEST Arabidopsis thaliana protein match is: Coatomer, beta subunit (TAIR:AT4G31490.1). & (reliability: 1886.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020553.157","No alias","Cyanophora paradoxa","(at1g33680 : 104.0) KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: KH domain-containing protein (TAIR:AT4G10070.1); Has 52223 Blast hits to 31714 proteins in 1554 species: Archae - 80; Bacteria - 6342; Metazoa - 24247; Fungi - 9116; Plants - 4309; Viruses - 323; Other Eukaryotes - 7806 (source: NCBI BLink). & (reliability: 196.4) &  (original description: no original description)","protein_coding"
"evm.model.tig00020554.128","No alias","Cyanophora paradoxa","(at4g17890 : 144.0) A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.; ARF-GAP domain 8 (AGD8); FUNCTIONS IN: ARF GTPase activator activity, DNA binding, zinc ion binding; INVOLVED IN: regulation of ARF GTPase activity; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 9 (TAIR:AT5G46750.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 288.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020554.129","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020554.135","No alias","Cyanophora paradoxa","(at1g55350 : 219.0) Similar to maize DEK1, a gene encoding a membrane protein of the calpain gene superfamily required for aleurone cell development in the endosperm of maize grains. A key component of the embryonic L1 cell-layer specification pathway.; DEFECTIVE KERNEL 1 (DEK1); FUNCTIONS IN: cysteine-type endopeptidase activity, calcium-dependent cysteine-type endopeptidase activity; INVOLVED IN: cell fate specification, embryo development ending in seed dormancy; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C2, calpain, domain III (InterPro:IPR022683), Peptidase C2, calpain, large subunit, domain III (InterPro:IPR022682), Peptidase, cysteine peptidase active site (InterPro:IPR000169), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Peptidase C2, calpain, catalytic domain (InterPro:IPR001300), Peptidase C2, calpain family (InterPro:IPR022684). & (reliability: 438.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020554.157","No alias","Cyanophora paradoxa","(at1g51710 : 330.0) Ubiquitin-specific protease 6 (UBP6). Deubiquinating enzyme. Interacts with calmodulin.; ubiquitin-specific protease 6 (UBP6); CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 7 (TAIR:AT3G21280.1); Has 4803 Blast hits to 4486 proteins in 237 species: Archae - 0; Bacteria - 0; Metazoa - 2534; Fungi - 849; Plants - 654; Viruses - 2; Other Eukaryotes - 764 (source: NCBI BLink). & (reliability: 660.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020554.70","No alias","Cyanophora paradoxa","(at5g13520 : 189.0) peptidase M1 family protein; FUNCTIONS IN: metallopeptidase activity, binding, zinc ion binding; INVOLVED IN: proteolysis, leukotriene biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M1, membrane alanine aminopeptidase (InterPro:IPR001930), Peptidase M1, membrane alanine aminopeptidase, N-terminal (InterPro:IPR014782), Peptidase M1, leukotriene A4 hydrolase, aminopeptidase C-terminal (InterPro:IPR015211), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: aminopeptidase M1 (TAIR:AT4G33090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 378.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020554.78","No alias","Cyanophora paradoxa","(at2g22310 : 145.0) Encodes a ubiquitin-specific protease.; ubiquitin-specific protease 4 (UBP4); CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 3 (TAIR:AT4G39910.1). & (reliability: 290.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020556.51","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020556.7","No alias","Cyanophora paradoxa"," (original description: no original description)","protein_coding"
"evm.model.tig00020557.18","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020563.114","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020563.172","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020563.190","No alias","Cyanophora paradoxa","(at5g46210 : 239.0) Arabidopsis CULLIN4 (CUL4) forms an E3 ubiquitin ligase with the CDD complex and a common catalytic subunit RBX1 in mediating light control of development.  This CUL4-based E3 ligase is essential for the repression of photomorphogenesis.  The partial loss of CUL4 function resulted in a constitutive photomorphogenic phenotype with respect to morphogenesis and light-regulated gene expression. CUL4 exhibits a synergistic genetic interaction with COP10 and DET1.; cullin4 (CUL4); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Cullin homology (InterPro:IPR016158), Cullin protein, neddylation domain (InterPro:IPR019559), Cullin, N-terminal (InterPro:IPR001373), Cullin, conserved site (InterPro:IPR016157), Cullin repeat-like-containing domain (InterPro:IPR016159); BEST Arabidopsis thaliana protein match is: cullin 3B (TAIR:AT1G69670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 478.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020563.191","No alias","Cyanophora paradoxa","(at4g02570 : 445.0) Encodes a cullin that is a component of  SCF ubiquitin ligase complexes involved in mediating responses to auxin and jasmonic acid. Homozygous auxin-resistant mutants arrest growth soon after germination, lacking a root and hypocotyl.  Heterozygotes display a variety of phenotypes consistent with impaired auxin response.; cullin 1 (CUL1); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Cullin homology (InterPro:IPR016158), Cullin protein, neddylation domain (InterPro:IPR019559), Cullin, conserved site (InterPro:IPR016157), Cullin, N-terminal (InterPro:IPR001373), Cullin repeat-like-containing domain (InterPro:IPR016159); BEST Arabidopsis thaliana protein match is: cullin 2 (TAIR:AT1G02980.1). & (reliability: 890.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020563.86","No alias","Cyanophora paradoxa","(at5g50920 : 990.0) Encodes a protein that is similar to ATP-dependent Clp protease ATP-binding subunit / ClpC. Involved in protein import into the chloroplast. May provide ATP source that drives the TIC (Translocon at the Inner envelope membrane of Chloroplasts) translocation machinery.; CLPC homologue 1 (CLPC1); FUNCTIONS IN: ATP-dependent peptidase activity, ATPase activity, ATP binding; INVOLVED IN: protein import into chloroplast stroma, regulation of chlorophyll biosynthetic process, protein targeting to chloroplast, chloroplast organization; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-2 (InterPro:IPR013093), ATPase, AAA+ type, core (InterPro:IPR003593), Chaperonin clpA/B (InterPro:IPR001270), Chaperonin ClpA/B, conserved site (InterPro:IPR018368), UvrB/UvrC protein (InterPro:IPR001943), Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: Clp ATPase (TAIR:AT3G48870.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p35100|clpc_pea : 984.0) ATP-dependent Clp protease ATP-binding subunit clpC homolog, chloroplast precursor - Pisum sativum (Garden pea) & (reliability: 1980.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020564.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020572.40","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020592.38","No alias","Cyanophora paradoxa","(at4g11380 : 730.0) Adaptin family protein; FUNCTIONS IN: protein transporter activity, clathrin binding, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport, protein transport; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain (InterPro:IPR008152), Armadillo-like helical (InterPro:IPR011989), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553), Clathrin adaptor, beta-adaptin, appendage, Ig-like subdomain (InterPro:IPR013037), Clathrin adaptor, beta-adaptin, appendage, C-terminal subdomain (InterPro:IPR015151), Beta2-adaptin/TATA-box binding, C-terminal (InterPro:IPR012295), Armadillo-type fold (InterPro:IPR016024), Clathrin/coatomer adaptor, adaptin-like, appendage, C-terminal subdomain (InterPro:IPR009028), Adaptor protein complex, beta subunit (InterPro:IPR016342), Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like subdomain (InterPro:IPR013041); BEST Arabidopsis thaliana protein match is: Adaptin family protein (TAIR:AT4G23460.1). & (reliability: 1460.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020601.16","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020603.52","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020603.53","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020610.78","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020614.5","No alias","Cyanophora paradoxa","(p93768|psmd3_tobac : 370.0) Probable 26S proteasome non-ATPase regulatory subunit 3 (26S proteasome subunit S3) (Nuclear antigen 21D7) - Nicotiana tabacum (Common tobacco) & (at1g75990 : 352.0) PAM domain (PCI/PINT associated module) protein; FUNCTIONS IN: enzyme regulator activity; INVOLVED IN: protein catabolic process, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome complex, plasma membrane, proteasome regulatory particle, lid subcomplex, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717), PCI/PINT associated module (InterPro:IPR013143), 26S proteasome regulatory subunit, C-terminal (InterPro:IPR013586); BEST Arabidopsis thaliana protein match is: PAM domain (PCI/PINT associated module) protein (TAIR:AT1G20200.1); Has 740 Blast hits to 739 proteins in 220 species: Archae - 0; Bacteria - 0; Metazoa - 313; Fungi - 146; Plants - 168; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (reliability: 704.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020616.33","No alias","Cyanophora paradoxa","(at1g55860 : 142.0) encodes a ubiquitin-protein ligase containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis.; ubiquitin-protein ligase 1 (UPL1); CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), E3 ubiquitin ligase, domain of unknown function DUF913 (InterPro:IPR010314), Ubiquitin interacting motif (InterPro:IPR003903), E3 ubiquitin ligase, domain of unknown function DUF908 (InterPro:IPR010309), HECT (InterPro:IPR000569), Armadillo-type fold (InterPro:IPR016024), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: ubiquitin-protein ligase 2 (TAIR:AT1G70320.1). & (reliability: 284.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020629.17","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020629.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020660.32","No alias","Cyanophora paradoxa","(at5g35170 : 85.1) adenylate kinase family protein; FUNCTIONS IN: nucleobase, nucleoside, nucleotide kinase activity, nucleotide kinase activity, adenylate kinase activity, phosphotransferase activity, phosphate group as acceptor, ATP binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenylate kinase, active site lid domain (InterPro:IPR007862), Adenylate kinase, subfamily (InterPro:IPR006259), Domain of unknown function DUF1995 (InterPro:IPR018962), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: adenosine monophosphate kinase (TAIR:AT5G47840.1); Has 15140 Blast hits to 14955 proteins in 5116 species: Archae - 100; Bacteria - 10012; Metazoa - 1330; Fungi - 481; Plants - 477; Viruses - 0; Other Eukaryotes - 2740 (source: NCBI BLink). & (reliability: 170.2) &  (original description: no original description)","protein_coding"
"evm.model.tig00020675.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020703.10","No alias","Cyanophora paradoxa","(at2g20580 : 598.0) encoding the RPN subunits of the 26S proteasome; 26S proteasome regulatory subunit S2 1A (RPN1A); FUNCTIONS IN: enzyme regulator activity, binding; INVOLVED IN: regulation of cell cycle, protein catabolic process, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome regulatory particle, base subcomplex, proteasome complex, nucleus, plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn1 subunit (InterPro:IPR016643), Armadillo-type fold (InterPro:IPR016024), Proteasome/cyclosome, regulatory subunit (InterPro:IPR002015); BEST Arabidopsis thaliana protein match is: 26S proteasome regulatory subunit S2 1B (TAIR:AT4G28470.1); Has 1002 Blast hits to 968 proteins in 295 species: Archae - 0; Bacteria - 4; Metazoa - 376; Fungi - 294; Plants - 141; Viruses - 0; Other Eukaryotes - 187 (source: NCBI BLink). & (reliability: 1196.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020703.19","No alias","Cyanophora paradoxa","(at1g50200 : 1004.0) Alanyl-tRNA synthetase (ALATS); FUNCTIONS IN: alanine-tRNA ligase activity, ligase activity, forming aminoacyl-tRNA and related compounds, nucleotide binding, ATP binding, nucleic acid binding; INVOLVED IN: alanyl-tRNA aminoacylation; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alanyl-tRNA synthetase, class IIc (InterPro:IPR002318), Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain (InterPro:IPR018163), Alanyl-tRNA synthetase, class IIc, anti-codon-binding domain (InterPro:IPR018162), Alanyl-tRNA synthetase, class IIc, core domain (InterPro:IPR018165), Threonyl/alanyl tRNA synthetase, SAD (InterPro:IPR012947), Alanyl-tRNA synthetase, class IIc, N-terminal (InterPro:IPR018164), Phosphoesterase, DHHA1 (InterPro:IPR003156); BEST Arabidopsis thaliana protein match is: Alanyl-tRNA synthetase, class IIc (TAIR:AT5G22800.1). & (reliability: 2008.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020713.5","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020780.23","No alias","Cyanophora paradoxa","(at5g17530 : 261.0) phosphoglucosamine mutase family protein; FUNCTIONS IN: intramolecular transferase activity, phosphotransferases; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (InterPro:IPR005846), Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (InterPro:IPR005845), Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (InterPro:IPR016055), Alpha-D-phosphohexomutase (InterPro:IPR005841), Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (InterPro:IPR005844); BEST Arabidopsis thaliana protein match is: phosphoglucomutase, putative / glucose phosphomutase, putative (TAIR:AT1G70820.1). & (reliability: 522.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020780.39","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020780.40","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020780.6","No alias","Cyanophora paradoxa","(at5g50580 : 94.7) Encodes one of the two subunits of the SUMO activation enzyme required during sumolation.  Sumolation is a post-translational protein modification process similar to ubiquitination during which a polypeptide (SUMO) is covalently attached to a target protein.; SUMO-activating enzyme 1B (SAE1B); CONTAINS InterPro DOMAIN/s: UBA/THIF-type NAD/FAD binding fold (InterPro:IPR000594), Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), NAD(P)-binding domain (InterPro:IPR016040), Ubiquitin-activating enzyme, E1-like (InterPro:IPR000011); BEST Arabidopsis thaliana protein match is: SUMO activating enzyme 1B (TAIR:AT5G50680.1); Has 4919 Blast hits to 4279 proteins in 1113 species: Archae - 94; Bacteria - 1852; Metazoa - 1152; Fungi - 654; Plants - 410; Viruses - 0; Other Eukaryotes - 757 (source: NCBI BLink). & (reliability: 184.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020801.31","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020825.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020848.76","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020878.25","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020892.27","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020902.114","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020902.23","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020902.66","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020904.135","No alias","Cyanophora paradoxa","(at5g14850 : 85.5) Alg9-like mannosyltransferase family; FUNCTIONS IN: mannosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: GPI anchor biosynthetic process, GPI anchor metabolic process; LOCATED IN: endoplasmic reticulum membrane, intrinsic to endoplasmic reticulum membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Alg9-like mannosyltransferase (InterPro:IPR005599); Has 1101 Blast hits to 1081 proteins in 222 species: Archae - 0; Bacteria - 46; Metazoa - 380; Fungi - 409; Plants - 121; Viruses - 0; Other Eukaryotes - 145 (source: NCBI BLink). & (reliability: 171.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020904.30","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020904.48","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020904.78","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020904.92","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020912.18","No alias","Cyanophora paradoxa","(at4g17020 : 159.0) transcription factor-related; FUNCTIONS IN: RNA polymerase II transcription factor activity; INVOLVED IN: DNA repair, regulation of transcription, DNA-dependent; LOCATED IN: endomembrane system, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor Tfb2 (InterPro:IPR004598). & (reliability: 318.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020912.77","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020934.33","No alias","Cyanophora paradoxa","(at1g69670 : 839.0) cullin, putative, contains similarity to Cullin homolog 3 (CUL-3) SP:Q13618, GI:3639052 from (Homo sapiens); contains Pfam profile PF00888: Cullin family. Interacts with members of AtBPM family and RBX1 suggesting it is part of an E3 ligase complex involved in RUB modification.; cullin 3B (CUL3B); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Cullin homology (InterPro:IPR016158), Cullin protein, neddylation domain (InterPro:IPR019559), Cullin, N-terminal (InterPro:IPR001373), Cullin repeat-like-containing domain (InterPro:IPR016159); BEST Arabidopsis thaliana protein match is: cullin 3 (TAIR:AT1G26830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1678.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020941.35","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020943.43","No alias","Cyanophora paradoxa","(at5g52790 : 182.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF21 (InterPro:IPR002550), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: CBS domain-containing protein with a domain of unknown function (DUF21) (TAIR:AT2G14520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 364.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020952.46","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020961.20","No alias","Cyanophora paradoxa","(at4g00830 : 147.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G52660.2). & (reliability: 294.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020964.33","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021015.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021035.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021035.16","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021037.56","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021043.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021070.109","No alias","Cyanophora paradoxa","(at2g06050 : 175.0) Encodes a 12-oxophytodienoate reductase that is required for jasmonate biosynthesis. Mutants are male sterile and defective in pollen dehiscence. Shows activity towards 2,4,6-trinitrotoluene.; oxophytodienoate-reductase 3 (OPR3); FUNCTIONS IN: 12-oxophytodienoate reductase activity; INVOLVED IN: response to jasmonic acid stimulus, response to fungus, jasmonic acid biosynthetic process, response to wounding, response to ozone; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NADH:flavin oxidoreductase/NADH oxidase, N-terminal (InterPro:IPR001155), Aldolase-type TIM barrel (InterPro:IPR013785); BEST Arabidopsis thaliana protein match is: 12-oxophytodienoate reductase 2 (TAIR:AT1G76690.1); Has 13056 Blast hits to 13024 proteins in 2039 species: Archae - 127; Bacteria - 9671; Metazoa - 31; Fungi - 870; Plants - 454; Viruses - 0; Other Eukaryotes - 1903 (source: NCBI BLink). & (reliability: 350.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021070.2","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021073.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021073.39","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021073.5","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021094.22","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021094.27","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021098.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021098.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021098.33","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021123.23","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021127.143","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021127.183","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021135.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021135.23","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021168.13","No alias","Cyanophora paradoxa","(at5g46630 : 357.0) clathrin adaptor complexes medium subunit family protein, contains Pfam profile: PF00928 adaptor complexes medium subunit family; similar to micro-adaptins of clathrin coated vesicle adaptor complexes; Clathrin adaptor complexes medium subunit family protein; INVOLVED IN: intracellular protein transport, transport, vesicle-mediated transport; LOCATED IN: clathrin vesicle coat, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, mu subunit, conserved site (InterPro:IPR018240), Clathrin adaptor, mu subunit, C-terminal (InterPro:IPR008968), Clathrin adaptor, mu subunit (InterPro:IPR001392), Clathrin coat associated protein AP-50 (InterPro:IPR015629), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: Clathrin adaptor complexes medium subunit family protein (TAIR:AT1G60780.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 714.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021168.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021168.20","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021179.27","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021181.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021181.5","No alias","Cyanophora paradoxa","(at1g60780 : 570.0) HAPLESS 13 (HAP13); INVOLVED IN: intracellular protein transport, transport, vesicle-mediated transport; LOCATED IN: clathrin vesicle coat, clathrin adaptor complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, mu subunit, conserved site (InterPro:IPR018240), Clathrin adaptor, mu subunit, C-terminal (InterPro:IPR008968), Clathrin adaptor, mu subunit (InterPro:IPR001392), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: Clathrin adaptor complexes medium subunit family protein (TAIR:AT1G10730.1); Has 2206 Blast hits to 2139 proteins in 330 species: Archae - 0; Bacteria - 0; Metazoa - 1107; Fungi - 506; Plants - 213; Viruses - 0; Other Eukaryotes - 380 (source: NCBI BLink). & (reliability: 1140.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021234.18","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021234.30","No alias","Cyanophora paradoxa"," (original description: no original description)","protein_coding"
"evm.model.tig00021275.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021275.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021276.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021281.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021293.30","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021312.12","No alias","Cyanophora paradoxa","(at3g12580 : 358.0) heat shock protein 70 (HSP70); FUNCTIONS IN: ATP binding; INVOLVED IN: in 9 processes; LOCATED IN: cytosol, mitochondrion, cell wall, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock cognate protein 70-1 (TAIR:AT5G02500.1); Has 34126 Blast hits to 33731 proteins in 4830 species: Archae - 159; Bacteria - 16481; Metazoa - 3906; Fungi - 1752; Plants - 1258; Viruses - 310; Other Eukaryotes - 10260 (source: NCBI BLink). & (p09189|hsp7c_pethy : 354.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (reliability: 716.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021312.50","No alias","Cyanophora paradoxa","(at5g37370 : 136.0) encodes a putative splicing factor. Over-expression in yeast and Arabidopsis result in increased tolerance to high salt.; ATSRL1; FUNCTIONS IN: binding; INVOLVED IN: response to salt stress, RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PRP38 (InterPro:IPR005037). & (reliability: 272.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021314.17","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021346.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021348.108","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021348.93","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021348.94","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021352.18","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021352.47","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021357.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021357.29","No alias","Cyanophora paradoxa","(at1g22870 : 360.0) Protein kinase family protein with ARM repeat domain; FUNCTIONS IN: protein serine/threonine kinase activity, binding, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Armadillo-like helical (InterPro:IPR011989), Serine/threonine-protein kinase domain (InterPro:IPR002290), Armadillo-type fold (InterPro:IPR016024), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G71410.1); Has 26365 Blast hits to 24990 proteins in 1293 species: Archae - 12; Bacteria - 3236; Metazoa - 8918; Fungi - 4021; Plants - 3829; Viruses - 24; Other Eukaryotes - 6325 (source: NCBI BLink). & (reliability: 720.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021357.43","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021365.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021433.20","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021433.26","No alias","Cyanophora paradoxa","(at2g26430 : 218.0) Encodes an ania-6a type arginine-rich cyclin which confers tolerance to LiCl and NaCl when expressed in yeast.; arginine-rich cyclin 1 (RCY1); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: response to salt stress, regulation of cell cycle, regulation of transcription; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin L (InterPro:IPR017060), Cyclin-like (InterPro:IPR011028), Transcription regulator cyclin (InterPro:IPR015429), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin family protein (TAIR:AT5G45190.1); Has 13929 Blast hits to 7818 proteins in 361 species: Archae - 16; Bacteria - 504; Metazoa - 7801; Fungi - 1963; Plants - 1370; Viruses - 16; Other Eukaryotes - 2259 (source: NCBI BLink). & (reliability: 436.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021434.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021435.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021435.13","No alias","Cyanophora paradoxa","(at2g26990 : 239.0) Represses photomorphogenesis and induces skotomorphogenesis in the dark.; FUSCA 12 (FUS12); INVOLVED IN: cullin deneddylation, photomorphogenesis, protein catabolic process; LOCATED IN: signalosome, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717), PCI/PINT associated module (InterPro:IPR013143); BEST Arabidopsis thaliana protein match is: non-ATPase subunit 9 (TAIR:AT1G29150.1); Has 881 Blast hits to 877 proteins in 239 species: Archae - 2; Bacteria - 9; Metazoa - 323; Fungi - 235; Plants - 190; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (reliability: 478.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021435.14","No alias","Cyanophora paradoxa","(at2g26990 : 299.0) Represses photomorphogenesis and induces skotomorphogenesis in the dark.; FUSCA 12 (FUS12); INVOLVED IN: cullin deneddylation, photomorphogenesis, protein catabolic process; LOCATED IN: signalosome, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717), PCI/PINT associated module (InterPro:IPR013143); BEST Arabidopsis thaliana protein match is: non-ATPase subunit 9 (TAIR:AT1G29150.1); Has 881 Blast hits to 877 proteins in 239 species: Archae - 2; Bacteria - 9; Metazoa - 323; Fungi - 235; Plants - 190; Viruses - 0; Other Eukaryotes - 122 (source: NCBI BLink). & (reliability: 598.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021435.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021464.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021464.28","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021489.25","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021489.27","No alias","Cyanophora paradoxa","(o23732|gshb_braju : 84.7) Glutathione synthetase, chloroplast precursor (EC 6.3.2.3) (Glutathione synthase) (GSH synthetase) (GSH-S) - Brassica juncea (Leaf mustard) (Indian mustard) & (at5g27380 : 80.9) Encodes a protein with similarity to glutathione synthetases, which catalyzes one of the early steps in glutathione biosynthesis. Two transcripts have been detected; the longer transcript is less abundant and the protein is localized to the chloroplast. The smaller transcript, in which the transit peptide is truncated, is localized to the cytosol.; glutathione synthetase 2 (GSH2); FUNCTIONS IN: glutathione synthase activity; INVOLVED IN: response to jasmonic acid stimulus, N-terminal protein myristoylation, glutathione biosynthetic process; LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PreATP-grasp-like fold (InterPro:IPR016185), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Glutathione synthase, eukaryotic (InterPro:IPR005615), Glutathione synthase, substrate-binding, eukaryotic (InterPro:IPR004887), Glutathione synthase, alpha-helical, eukaryotic (InterPro:IPR014042); Has 644 Blast hits to 607 proteins in 239 species: Archae - 0; Bacteria - 51; Metazoa - 212; Fungi - 156; Plants - 112; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (reliability: 161.8) &  (original description: no original description)","protein_coding"
"evm.model.tig00021489.28","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021489.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021494.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021537.39","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021537.5","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021571.31","No alias","Cyanophora paradoxa","(at1g21980 : 120.0) Type I phosphatidylinositol-4-phosphate 5-kinase. Preferentially phosphorylates PtdIns4P. Induced by water stress and abscisic acid in Arabidopsis thaliana. Expressed in procambial cells of leaves, flowers and roots. A N-terminal Membrane Occupation and Recognition Nexus (MORN)affects enzyme activity and distribution.; phosphatidylinositol-4-phosphate 5-kinase 1 (PIP5K1); CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, plant (InterPro:IPR017163), MORN motif (InterPro:IPR003409), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: phosphatidylinositol-4-phosphate 5-kinase 2 (TAIR:AT1G77740.1); Has 28574 Blast hits to 7954 proteins in 630 species: Archae - 0; Bacteria - 3995; Metazoa - 4425; Fungi - 453; Plants - 2526; Viruses - 0; Other Eukaryotes - 17175 (source: NCBI BLink). & (q6ex42|pi5k1_orysa : 90.5) Phosphatidylinositol-4-phosphate 5-kinase 1 precursor (EC 2.7.1.68) (1-phosphatidylinositol-4-phosphate kinase) (PIP5K) (PtdIns(4)P-5-kinase) (Diphosphoinositide kinase) - Oryza sativa (Rice) & (reliability: 240.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021583.8","No alias","Cyanophora paradoxa","(at4g24860 : 124.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding; LOCATED IN: chloroplast; EXPRESSED IN: shoot apex, leaf whorl, sperm cell, sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT1G62130.1); Has 36802 Blast hits to 34347 proteins in 3158 species: Archae - 1551; Bacteria - 15209; Metazoa - 4767; Fungi - 3515; Plants - 2998; Viruses - 28; Other Eukaryotes - 8734 (source: NCBI BLink). & (q96372|cdc48_capan : 112.0) Cell division cycle protein 48 homolog - Capsicum annuum (Bell pepper) & (reliability: 226.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021590.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021616.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021617.2","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021680.25","No alias","Cyanophora paradoxa","(at5g67320 : 318.0) Encodes a WD-40 protein involved in histone deacetylation in response to abiotic stress.Identified in a screen for mutations with altered expression of stress induced genes. Functions as a repressor of cold tolerance induced genes. Loss of function mutants are hypersensitive to freezing.; high expression of osmotically responsive genes 15 (HOS15); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: TBP-associated factor 5 (TAIR:AT5G25150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 636.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021680.28","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021720.19","No alias","Cyanophora paradoxa","(at1g75660 : 283.0) Encodes a protein with similarity to yeast 5'-3'exonucleases and can functionally complement the yeast mutations. In Arabidopsis XRN3 acts as a suppressor of posttranscriptional gene silencing. Mutants accumulate excised miRNA products suggesting that XRN3 is involved in degradation of these products.; 5'-3' exoribonuclease 3 (XRN3); CONTAINS InterPro DOMAIN/s: 5'-3' exoribonuclease 2 (InterPro:IPR017151), Zinc finger, CCHC-type (InterPro:IPR001878), Putative 5-3 exonuclease (InterPro:IPR004859); BEST Arabidopsis thaliana protein match is: exoribonuclease 2 (TAIR:AT5G42540.1); Has 4264 Blast hits to 3505 proteins in 442 species: Archae - 2; Bacteria - 295; Metazoa - 1361; Fungi - 725; Plants - 751; Viruses - 31; Other Eukaryotes - 1099 (source: NCBI BLink). & (reliability: 566.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021795.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00022075.20","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00022075.23","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00022075.35","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00022075.64","No alias","Cyanophora paradoxa","(at1g49710 : 179.0) Encodes a protein with core α1,3-fucosyltransferase activity.; fucosyltransferase 12 (FUT12); FUNCTIONS IN: transferase activity, transferring glycosyl groups, fucosyltransferase activity; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: Golgi apparatus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 10 (InterPro:IPR001503); BEST Arabidopsis thaliana protein match is: fucosyltransferase 11 (TAIR:AT3G19280.1); Has 1527 Blast hits to 1523 proteins in 197 species: Archae - 4; Bacteria - 161; Metazoa - 1008; Fungi - 0; Plants - 130; Viruses - 3; Other Eukaryotes - 221 (source: NCBI BLink). & (reliability: 358.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00022099.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"Glyma.01G011200","No alias","Glycine max","extra-large GTP-binding protein 3","protein_coding"
"Glyma.01G015000","No alias","Glycine max","WWE protein-protein interaction domain protein family","protein_coding"
"Glyma.01G029600","No alias","Glycine max","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"Glyma.01G054500","No alias","Glycine max","chorismate mutase 3","protein_coding"
"Glyma.01G081500","No alias","Glycine max","Rad23 UV excision repair protein family","protein_coding"
"Glyma.01G098000","No alias","Glycine max","indole-3-acetic acid inducible 9","protein_coding"
"Glyma.01G108900","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.01G129600","No alias","Glycine max","2-oxoglutarate-dependent dioxygenase family protein","protein_coding"
"Glyma.01G139600","No alias","Glycine max","RNA 3\'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta","protein_coding"
"Glyma.01G147600","No alias","Glycine max","Integrase-type DNA-binding superfamily protein","protein_coding"
"Glyma.01G220400","No alias","Glycine max","SIGNAL PEPTIDE PEPTIDASE-LIKE 2","protein_coding"
"Glyma.02G015700","No alias","Glycine max","fumarase 1","protein_coding"
"Glyma.02G032800","No alias","Glycine max","Threonyl-tRNA synthetase","protein_coding"
"Glyma.02G046900","No alias","Glycine max","regulatory particle non-ATPase 10","protein_coding"
"Glyma.02G050600","No alias","Glycine max","Protein of unknown function (DUF3353)","protein_coding"
"Glyma.02G050900","No alias","Glycine max","Protein of unknown function (DUF726)","protein_coding"
"Glyma.02G059800","No alias","Glycine max","vacuolar ATP synthase subunit H family protein","protein_coding"
"Glyma.02G091200","No alias","Glycine max","CLP protease proteolytic subunit 3","protein_coding"
"Glyma.02G136900","No alias","Glycine max","Zinc-finger domain of monoamine-oxidase A repressor R1","protein_coding"
"Glyma.02G179300","No alias","Glycine max","AGAMOUS-like 62","protein_coding"
"Glyma.03G009300","No alias","Glycine max","calmodulin binding;purine nucleotide binding","protein_coding"
"Glyma.03G021400","No alias","Glycine max","WD-40 repeat family protein / beige-related","protein_coding"
"Glyma.03G022400","No alias","Glycine max","photolyase/blue-light receptor 2","protein_coding"
"Glyma.03G033300","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.03G087400","No alias","Glycine max","receptor like protein 23","protein_coding"
"Glyma.03G100800","No alias","Glycine max","Phosphoribosyltransferase family protein","protein_coding"
"Glyma.03G114800","No alias","Glycine max","Plant protein of unknown function (DUF247)","protein_coding"
"Glyma.03G140200","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.03G155100","No alias","Glycine max","RNI-like superfamily protein","protein_coding"
"Glyma.03G158500","No alias","Glycine max","basic helix-loop-helix (bHLH) DNA-binding superfamily protein","protein_coding"
"Glyma.03G175300","No alias","Glycine max","ABC-2 type transporter family protein","protein_coding"
"Glyma.03G183400","No alias","Glycine max","Histidyl-tRNA synthetase 1","protein_coding"
"Glyma.03G204400","No alias","Glycine max","RING-H2 group F2A","protein_coding"
"Glyma.03G221900","No alias","Glycine max","myb domain protein 2","protein_coding"
"Glyma.03G240600","No alias","Glycine max","glutathione synthetase 2","protein_coding"
"Glyma.03G240651","No alias","Glycine max","glutathione synthetase 2","protein_coding"
"Glyma.04G000600","No alias","Glycine max","Plant regulator RWP-RK family protein","protein_coding"
"Glyma.04G026300","No alias","Glycine max","basic pentacysteine 6","protein_coding"
"Glyma.04G039200","No alias","Glycine max","Protein of unknown function (DUF3223)","protein_coding"
"Glyma.04G046600","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.04G057632","No alias","Glycine max","translation initiation factor 3B1","protein_coding"
"Glyma.04G092300","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.04G125600","No alias","Glycine max","zinc ion binding","protein_coding"
"Glyma.04G196800","No alias","Glycine max","CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein","protein_coding"
"Glyma.04G218102","No alias","Glycine max","Putative endonuclease or glycosyl hydrolase","protein_coding"
"Glyma.04G219500","No alias","Glycine max","disproportionating enzyme","protein_coding"
"Glyma.04G245700","No alias","Glycine max","wound-responsive family protein","protein_coding"
"Glyma.05G008400","No alias","Glycine max","Zinc finger (CCCH-type) family protein","protein_coding"
"Glyma.05G042700","No alias","Glycine max","FUS3-complementing gene 2","protein_coding"
"Glyma.05G053000","No alias","Glycine max","glycine-rich protein","protein_coding"
"Glyma.05G055000","No alias","Glycine max","copper chaperone for SOD1","protein_coding"
"Glyma.05G056400","No alias","Glycine max","Aldolase superfamily protein","protein_coding"
"Glyma.05G059500","No alias","Glycine max","Class II aminoacyl-tRNA and biotin synthetases superfamily protein","protein_coding"
"Glyma.05G088550","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.05G135800","No alias","Glycine max","CCCH-type zinc finger family protein","protein_coding"
"Glyma.05G145600","No alias","Glycine max","Acid phosphatase/vanadium-dependent haloperoxidase-related protein","protein_coding"
"Glyma.05G167700","No alias","Glycine max","ACT domain-containing small subunit of acetolactate synthase protein","protein_coding"
"Glyma.05G175800","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.05G175967","No alias","Glycine max","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"Glyma.05G222900","No alias","Glycine max","Metallopeptidase M24 family protein","protein_coding"
"Glyma.06G001600","No alias","Glycine max","RNApolymerase sigma subunit 2","protein_coding"
"Glyma.06G039900","No alias","Glycine max","Thioredoxin superfamily protein","protein_coding"
"Glyma.06G083100","No alias","Glycine max","alpha/beta-Hydrolases superfamily protein","protein_coding"
"Glyma.06G090600","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.06G210900","No alias","Glycine max","O-Glycosyl hydrolases family 17 protein","protein_coding"
"Glyma.06G212100","No alias","Glycine max","Protein of unknown function (DUF2921)","protein_coding"
"Glyma.06G237900","No alias","Glycine max","Ankyrin repeat family protein","protein_coding"
"Glyma.06G280400","No alias","Glycine max","SAUR-like auxin-responsive protein family","protein_coding"
"Glyma.07G055950","No alias","Glycine max","Leucine-rich repeat protein kinase family protein","protein_coding"
"Glyma.07G123300","No alias","Glycine max","FAD-linked oxidases family protein","protein_coding"
"Glyma.07G142000","No alias","Glycine max","Arabidopsis Inositol phosphorylceramide synthase 1","protein_coding"
"Glyma.07G264800","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.08G019500","No alias","Glycine max","CAAX amino terminal protease family protein","protein_coding"
"Glyma.08G021800","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.08G022800","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.08G028700","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.08G042200","No alias","Glycine max","XAP5 family protein","protein_coding"
"Glyma.08G064300","No alias","Glycine max","Ankyrin repeat family protein with DHHC zinc finger domain","protein_coding"
"Glyma.08G088600","No alias","Glycine max","NAD(P)-binding Rossmann-fold superfamily protein","protein_coding"
"Glyma.08G122233","No alias","Glycine max","Sulfite exporter TauE/SafE family protein","protein_coding"
"Glyma.08G124600","No alias","Glycine max","evolutionarily conserved C-terminal region 2","protein_coding"
"Glyma.08G136400","No alias","Glycine max","peroxisomal ABC transporter 1","protein_coding"
"Glyma.08G142100","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.08G174400","No alias","Glycine max","Protein kinase superfamily protein","protein_coding"
"Glyma.08G175900","No alias","Glycine max","TCP-1/cpn60 chaperonin family protein","protein_coding"
"Glyma.08G181500","No alias","Glycine max","Peroxidase superfamily protein","protein_coding"
"Glyma.08G201000","No alias","Glycine max","hydroxyproline-rich glycoprotein family protein","protein_coding"
"Glyma.09G001900","No alias","Glycine max","eukaryotic translation initiation factor SUI1 family protein","protein_coding"
"Glyma.09G023500","No alias","Glycine max","Plant self-incompatibility protein S1 family","protein_coding"
"Glyma.09G029800","No alias","Glycine max","WRKY DNA-binding protein 14","protein_coding"
"Glyma.09G067900","No alias","Glycine max","RING/U-box superfamily protein","protein_coding"
"Glyma.09G086100","No alias","Glycine max","Arabidopsis thaliana protein of unknown function (DUF794)","protein_coding"
"Glyma.09G146000","No alias","Glycine max","SEUSS-like 2","protein_coding"
"Glyma.09G202832","No alias","Glycine max","disease resistance protein (TIR-NBS-LRR class), putative","protein_coding"
"Glyma.09G224100","No alias","Glycine max","LUC7 N_terminus domain-containing protein","protein_coding"
"Glyma.09G227400","No alias","Glycine max","Nucleic acid-binding, OB-fold-like protein","protein_coding"
"Glyma.09G239400","No alias","Glycine max","homeobox 3","protein_coding"
"Glyma.09G251700","No alias","Glycine max","Cystathionine beta-synthase (CBS) family protein","protein_coding"
"Glyma.09G258700","No alias","Glycine max","origin recognition complex protein 5","protein_coding"
"Glyma.09G279100","No alias","Glycine max","cytochrome P450, family 71, subfamily B, polypeptide 34","protein_coding"
"Glyma.10G043000","No alias","Glycine max","regulatory particle AAA-ATPase 2A","protein_coding"
"Glyma.10G044200","No alias","Glycine max","Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain","protein_coding"
"Glyma.10G070400","No alias","Glycine max","protein phosphatase 2A  subunit A2","protein_coding"
"Glyma.10G078900","No alias","Glycine max","ribosomal protein L2","protein_coding"
"Glyma.10G136800","No alias","Glycine max","Protein of unknown function (DUF810)","protein_coding"
"Glyma.10G154600","No alias","Glycine max","plant glycogenin-like starch initiation protein 4","protein_coding"
"Glyma.10G155400","No alias","Glycine max","amidase 1","protein_coding"
"Glyma.10G196600","No alias","Glycine max","Homeodomain-like superfamily protein","protein_coding"
"Glyma.10G208100","No alias","Glycine max","Sec1/munc18-like (SM) proteins superfamily","protein_coding"
"Glyma.10G289600","No alias","Glycine max","methionyl-tRNA synthetase / methionine--tRNA ligase / MetRS (cpMetRS)","protein_coding"
"Glyma.11G106800","No alias","Glycine max","subtilisin-like serine protease 2","protein_coding"
"Glyma.11G112200","No alias","Glycine max","MATE efflux family protein","protein_coding"
"Glyma.11G112600","No alias","Glycine max","xylulose kinase-1","protein_coding"
"Glyma.11G183200","No alias","Glycine max","Glycosyl hydrolase superfamily protein","protein_coding"
"Glyma.11G198700","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.12G005900","No alias","Glycine max","splicing factor-related","protein_coding"
"Glyma.12G044000","No alias","Glycine max","coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative","protein_coding"
"Glyma.12G120300","No alias","Glycine max","acyl-CoA oxidase 3","protein_coding"
"Glyma.12G152700","No alias","Glycine max","Domain of unknown function (DUF3598)","protein_coding"
"Glyma.12G156900","No alias","Glycine max","Plant protein of unknown function (DUF641)","protein_coding"
"Glyma.12G173200","No alias","Glycine max","4-hydroxy-3-methylbut-2-enyl diphosphate synthase","protein_coding"
"Glyma.12G237367","No alias","Glycine max","MATE efflux family protein","protein_coding"
"Glyma.13G031300","No alias","Glycine max","SWITCH/sucrose nonfermenting 3C","protein_coding"
"Glyma.13G072500","No alias","Glycine max","nudix hydrolase homolog 3","protein_coding"
"Glyma.13G096400","No alias","Glycine max","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein","protein_coding"
"Glyma.13G145100","No alias","Glycine max","NRAMP metal ion transporter family protein","protein_coding"
"Glyma.13G146100","No alias","Glycine max","alpha carbonic anhydrase 7","protein_coding"
"Glyma.13G223800","No alias","Glycine max","nitrate transporter 1:2","protein_coding"
"Glyma.13G253500","No alias","Glycine max","basic helix-loop-helix (bHLH) DNA-binding superfamily protein","protein_coding"
"Glyma.13G269000","No alias","Glycine max","RAB GTPase homolog A1B","protein_coding"
"Glyma.13G279700","No alias","Glycine max","Toll-Interleukin-Resistance (TIR) domain family protein","protein_coding"
"Glyma.13G313700","No alias","Glycine max","Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family","protein_coding"
"Glyma.13G336200","No alias","Glycine max","triosephosphate isomerase","protein_coding"
"Glyma.13G343300","No alias","Glycine max","IBR domain-containing protein","protein_coding"
"Glyma.13G343500","No alias","Glycine max","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding"
"Glyma.14G003200","No alias","Glycine max","Coproporphyrinogen III oxidase","protein_coding"
"Glyma.14G022100","No alias","Glycine max","Dihydrolipoamide succinyltransferase","protein_coding"
"Glyma.14G035800","No alias","Glycine max","calcium-dependent protein kinase 17","protein_coding"
"Glyma.14G044200","No alias","Glycine max","Pectin lyase-like superfamily protein","protein_coding"
"Glyma.14G085100","No alias","Glycine max","long-chain base1","protein_coding"
"Glyma.14G103300","No alias","Glycine max","NADH dehydrogenase subunit 7","protein_coding"
"Glyma.14G184200","No alias","Glycine max","Pentatricopeptide repeat (PPR-like) superfamily protein","protein_coding"
"Glyma.15G012100","No alias","Glycine max","gibberellin 3-oxidase 1","protein_coding"
"Glyma.15G039800","No alias","Glycine max","SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein","protein_coding"
"Glyma.15G050101","No alias","Glycine max","Inositol monophosphatase family protein","protein_coding"
"Glyma.15G101000","No alias","Glycine max","Adenosylmethionine decarboxylase family protein","protein_coding"
"Glyma.15G102100","No alias","Glycine max","alpha/beta-Hydrolases superfamily protein","protein_coding"
"Glyma.15G136100","No alias","Glycine max","Coatomer epsilon subunit","protein_coding"
"Glyma.15G182000","No alias","Glycine max","Riboflavin synthase-like superfamily protein","protein_coding"
"Glyma.15G254000","No alias","Glycine max","NAC domain containing protein 1","protein_coding"
"Glyma.16G013900","No alias","Glycine max","alanine aminotransferase 2","protein_coding"
"Glyma.16G042600","No alias","Glycine max","transcription regulator NOT2/NOT3/NOT5 family protein","protein_coding"
"Glyma.16G076000","No alias","Glycine max","RING/U-box superfamily protein","protein_coding"
"Glyma.16G123000","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.16G139400","No alias","Glycine max","GATA type zinc finger transcription factor family protein","protein_coding"
"Glyma.16G198700","No alias","Glycine max","MATE efflux family protein","protein_coding"
"Glyma.17G001400","No alias","Glycine max","Translation elongation factor EF1B, gamma chain","protein_coding"
"Glyma.17G022500","No alias","Glycine max","sodium hydrogen exchanger 2","protein_coding"
"Glyma.17G066300","No alias","Glycine max","CBL-interacting protein kinase 21","protein_coding"
"Glyma.17G078800","No alias","Glycine max","F-box/RNI-like superfamily protein","protein_coding"
"Glyma.17G083100","No alias","Glycine max","serine/threonine protein kinase 3","protein_coding"
"Glyma.17G100600","No alias","Glycine max","malate dehydrogenase","protein_coding"
"Glyma.17G106200","No alias","Glycine max","chlororespiratory reduction 6","protein_coding"
"Glyma.17G112700","No alias","Glycine max","general control non-repressible 4","protein_coding"
"Glyma.17G142000","No alias","Glycine max","Class II aminoacyl-tRNA and biotin synthetases superfamily protein","protein_coding"
"Glyma.17G147700","No alias","Glycine max","CLP protease R subunit 4","protein_coding"
"Glyma.17G190800","No alias","Glycine max","D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein","protein_coding"
"Glyma.17G218200","No alias","Glycine max","aldehyde dehydrogenase 11A3","protein_coding"
"Glyma.17G261700","No alias","Glycine max","catalase 2","protein_coding"
"Glyma.18G102800","No alias","Glycine max","tryptophan synthase beta-subunit 2","protein_coding"
"Glyma.18G119700","No alias","Glycine max","auxin response factor 8","protein_coding"
"Glyma.18G122000","No alias","Glycine max","Galactose oxidase/kelch repeat superfamily protein","protein_coding"
"Glyma.18G128466","No alias","Glycine max","Pentatricopeptide repeat (PPR-like) superfamily protein","protein_coding"
"Glyma.18G200800","No alias","Glycine max","LMBR1-like membrane protein","protein_coding"
"Glyma.18G216500","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.18G232400","No alias","Glycine max","beta-amylase 7","protein_coding"
"Glyma.18G299400","No alias","Glycine max","Got1/Sft2-like vescicle transport protein family","protein_coding"
"Glyma.18G300100","No alias","Glycine max","Protein kinase family protein","protein_coding"
"Glyma.19G034766","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.19G082500","No alias","Glycine max","pre-mRNA processing ribonucleoprotein binding region-containing protein","protein_coding"
"Glyma.19G194985","No alias","Glycine max","chloroplast signal recognition particle 54 kDa subunit","protein_coding"
"Glyma.19G209800","No alias","Glycine max","tetratricopeptide repeat (TPR)-containing protein","protein_coding"
"Glyma.19G221800","No alias","Glycine max","Chitinase family protein","protein_coding"
"Glyma.19G231900","No alias","Glycine max","alpha/beta-Hydrolases superfamily protein","protein_coding"
"Glyma.19G237700","No alias","Glycine max","glutathione synthetase 2","protein_coding"
"Glyma.19G237800","No alias","Glycine max","glutathione synthetase 2","protein_coding"
"Glyma.19G237900","No alias","Glycine max","glutathione synthetase 2","protein_coding"
"Glyma.20G004700","No alias","Glycine max","cytochrome P450, family 96, subfamily A, polypeptide 10","protein_coding"
"Glyma.20G011200","No alias","Glycine max","GRAM domain-containing protein / ABA-responsive protein-related","protein_coding"
"Glyma.20G027300","No alias","Glycine max","Regulator of Vps4 activity in the MVB pathway protein","protein_coding"
"Glyma.20G049901","No alias","Glycine max","phospholipase D beta 1","protein_coding"
"Glyma.20G066900","No alias","Glycine max","with no lysine (K) kinase 8","protein_coding"
"Glyma.20G099600","No alias","Glycine max","methionyl-tRNA synthetase / methionine--tRNA ligase / MetRS (cpMetRS)","protein_coding"
"Glyma.20G151300","No alias","Glycine max","Leucine-rich repeat protein kinase family protein","protein_coding"
"Glyma.20G164500","No alias","Glycine max","plastidic pyruvate kinase beta subunit 1","protein_coding"
"Glyma.20G178400","No alias","Glycine max","Pseudouridine synthase family protein","protein_coding"
"Glyma.20G190400","No alias","Glycine max","dual specificity protein phosphatase (DsPTP1) family protein","protein_coding"
"Glyma.20G192300","No alias","Glycine max","NAC domain containing protein 50","protein_coding"
"Glyma.20G230700","No alias","Glycine max","Prefoldin chaperone subunit family protein","protein_coding"
"Glyma.20G244801","No alias","Glycine max","glucan synthase-like 9","protein_coding"
"Glyma.U031101","No alias","Glycine max","Function unknown","protein_coding"
"GRMZM2G000645","No alias","Zea mays","Coatomer, beta\' subunit","protein_coding"
"GRMZM2G001097","No alias","Zea mays","TRAF-like superfamily protein","protein_coding"
"GRMZM2G004180","No alias","Zea mays","hydroxyproline-rich glycoprotein family protein","protein_coding"
"GRMZM2G006119","No alias","Zea mays","hydroxysteroid dehydrogenase 1","protein_coding"
"GRMZM2G006452","No alias","Zea mays","Structural maintenance of chromosomes (SMC) family protein","protein_coding"
"GRMZM2G014240","No alias","Zea mays","Inorganic H pyrophosphatase family protein","protein_coding"
"GRMZM2G014793","No alias","Zea mays","O-fucosyltransferase family protein","protein_coding"
"GRMZM2G018027","No alias","Zea mays","oxidative stress 3","protein_coding"
"GRMZM2G023992","No alias","Zea mays","Reticulon family protein","protein_coding"
"GRMZM2G024444","No alias","Zea mays","Glycosyltransferase family 61 protein","protein_coding"
"GRMZM2G034622","No alias","Zea mays","ubiquitin protein ligase 6","protein_coding"
"GRMZM2G034768","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G037094","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G038492","No alias","Zea mays","glutathione synthetase 2","protein_coding"
"GRMZM2G040039","No alias","Zea mays","glutathione synthetase 2","protein_coding"
"GRMZM2G040991","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G043414","No alias","Zea mays","Diacylglycerol kinase family protein","protein_coding"
"GRMZM2G044011","No alias","Zea mays","Eukaryotic release factor 1 (eRF1) family protein","protein_coding"
"GRMZM2G044783","No alias","Zea mays","Transmembrane amino acid transporter family protein","protein_coding"
"GRMZM2G045668","No alias","Zea mays","Transcription factor TFIIE, alpha subunit","protein_coding"
"GRMZM2G047038","No alias","Zea mays","DNA-binding family protein","protein_coding"
"GRMZM2G048762","No alias","Zea mays","mannosyltransferase family protein","protein_coding"
"GRMZM2G048819","No alias","Zea mays","Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain","protein_coding"
"GRMZM2G049329","No alias","Zea mays","poly(A) polymerase 2","protein_coding"
"GRMZM2G051327","No alias","Zea mays","syntaxin of plants 43","protein_coding"
"GRMZM2G052699","No alias","Zea mays","Protein phosphatase 2C family protein","protein_coding"
"GRMZM2G056686","No alias","Zea mays","coenzyme F420 hydrogenase family / dehydrogenase, beta subunit family","protein_coding"
"GRMZM2G057394","No alias","Zea mays","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"GRMZM2G061578","No alias","Zea mays","ubiquitin-specific protease 4","protein_coding"
"GRMZM2G064831","No alias","Zea mays","EamA-like transporter family","protein_coding"
"GRMZM2G064841","No alias","Zea mays","ADP-glucose pyrophosphorylase family protein","protein_coding"
"GRMZM2G071172","No alias","Zea mays","Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related","protein_coding"
"GRMZM2G073180","No alias","Zea mays","Protein of unknown function (DUF789)","protein_coding"
"GRMZM2G075250","No alias","Zea mays","Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein","protein_coding"
"GRMZM2G078238","No alias","Zea mays","Protein of unknown function (DUF300)","protein_coding"
"GRMZM2G082181","No alias","Zea mays","Protein of unknown function (DUF300)","protein_coding"
"GRMZM2G085301","No alias","Zea mays","Major facilitator superfamily protein","protein_coding"
"GRMZM2G085427","No alias","Zea mays","TSL-kinase interacting protein 1","protein_coding"
"GRMZM2G085916","No alias","Zea mays","glutathione synthetase 2","protein_coding"
"GRMZM2G086484","No alias","Zea mays","Pleckstrin homology (PH) domain superfamily protein","protein_coding"
"GRMZM2G088778","No alias","Zea mays","ankyrin repeat family protein","protein_coding"
"GRMZM2G089803","No alias","Zea mays","ent-kaurenoic acid hydroxylase 2","protein_coding"
"GRMZM2G091583","No alias","Zea mays","RNA binding (RRM/RBD/RNP motifs) family protein","protein_coding"
"GRMZM2G095757","No alias","Zea mays","phosphatidyl serine synthase family protein","protein_coding"
"GRMZM2G097750","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G097827","No alias","Zea mays","Calcium-binding EF-hand family protein","protein_coding"
"GRMZM2G100473","No alias","Zea mays","TPX2 (targeting protein for Xklp2) protein family","protein_coding"
"GRMZM2G100838","No alias","Zea mays","DegP protease 1","protein_coding"
"GRMZM2G103166","No alias","Zea mays","Transcription factor GTE6","protein_coding"
"GRMZM2G105772","No alias","Zea mays","Rad23 UV excision repair protein family","protein_coding"
"GRMZM2G108712","No alias","Zea mays","proliferating cell nuclear antigen 2","protein_coding"
"GRMZM2G111152","No alias","Zea mays","AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein","protein_coding"
"GRMZM2G113062","No alias","Zea mays","methionine aminopeptidase 1A","protein_coding"
"GRMZM2G113592","No alias","Zea mays","U1 small nuclear ribonucleoprotein-70K","protein_coding"
"GRMZM2G118072","No alias","Zea mays","O-fucosyltransferase family protein","protein_coding"
"GRMZM2G122954","No alias","Zea mays","Endosomal targeting BRO1-like domain-containing protein","protein_coding"
"GRMZM2G125784","No alias","Zea mays","Mitochondrial ribosomal protein L27","protein_coding"
"GRMZM2G126873","No alias","Zea mays","vacuoleless1 (VCL1)","protein_coding"
"GRMZM2G128176","No alias","Zea mays","DNA binding;zinc ion binding;DNA binding","protein_coding"
"GRMZM2G134332","No alias","Zea mays","AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein","protein_coding"
"GRMZM2G135410","No alias","Zea mays","SWITCH/sucrose nonfermenting 3A","protein_coding"
"GRMZM2G136700","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G137596","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G140594","No alias","Zea mays","FRIGIDA-like protein","protein_coding"
"GRMZM2G143029","No alias","Zea mays","exocyst subunit exo70 family protein D1","protein_coding"
"GRMZM2G143817","No alias","Zea mays","DERLIN-1","protein_coding"
"GRMZM2G147408","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G147491","No alias","Zea mays","O-methyltransferase family protein","protein_coding"
"GRMZM2G150915","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G151387","No alias","Zea mays","SAP domain-containing protein","protein_coding"
"GRMZM2G153150","No alias","Zea mays","retinoblastoma-related 1","protein_coding"
"GRMZM2G153877","No alias","Zea mays","SNARE associated Golgi protein family","protein_coding"
"GRMZM2G155375","No alias","Zea mays","acyl-CoA binding protein 4","protein_coding"
"GRMZM2G155974","No alias","Zea mays","glutathione synthetase 2","protein_coding"
"GRMZM2G157310","No alias","Zea mays","5\'-nucleotidases;magnesium ion binding","protein_coding"
"GRMZM2G159586","No alias","Zea mays","glutathione synthetase 2","protein_coding"
"GRMZM2G160151","No alias","Zea mays","cleavage and polyadenylation specificity factor 73 kDa subunit-II","protein_coding"
"GRMZM2G160174","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G162949","No alias","Zea mays","RING/U-box superfamily protein","protein_coding"
"GRMZM2G163004","No alias","Zea mays","glutathione synthetase 2","protein_coding"
"GRMZM2G163717","No alias","Zea mays","DHHC-type zinc finger family protein","protein_coding"
"GRMZM2G165007","No alias","Zea mays","Galactose oxidase/kelch repeat superfamily protein","protein_coding"
"GRMZM2G167718","No alias","Zea mays","global transcription factor group E4","protein_coding"
"GRMZM2G168096","No alias","Zea mays","DNA binding;ATP binding;nucleic acid binding;binding;helicases;ATP binding;DNA binding;helicases","protein_coding"
"GRMZM2G173600","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G173882","No alias","Zea mays","Homeodomain-like superfamily protein","protein_coding"
"GRMZM2G174610","No alias","Zea mays","AP2/B3-like transcriptional factor family protein","protein_coding"
"GRMZM2G177263","No alias","Zea mays","Transcription initiation factor TFIIE, beta subunit","protein_coding"
"GRMZM2G300589","No alias","Zea mays","RING/U-box superfamily protein","protein_coding"
"GRMZM2G306935","No alias","Zea mays","CwfJ-like family protein / zinc finger (CCCH-type) family protein","protein_coding"
"GRMZM2G312970","No alias","Zea mays","with no lysine (K) kinase 3","protein_coding"
"GRMZM2G321753","No alias","Zea mays","calpain-type cysteine protease family","protein_coding"
"GRMZM2G322634","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G346251","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G347583","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G357730","No alias","Zea mays","Peptidase M20/M25/M40 family protein","protein_coding"
"GRMZM2G361593","No alias","Zea mays","pfkB-like carbohydrate kinase family protein","protein_coding"
"GRMZM2G365282","No alias","Zea mays","cysteine-rich RLK (RECEPTOR-like protein kinase) 25","protein_coding"
"GRMZM2G368908","No alias","Zea mays","RP non-ATPase subunit 8A","protein_coding"
"GRMZM2G371679","No alias","Zea mays","Protein of unknown function (DUF620)","protein_coding"
"GRMZM2G379219","No alias","Zea mays","glutathione synthetase 2","protein_coding"
"GRMZM2G379252","No alias","Zea mays","glutathione synthetase 2","protein_coding"
"GRMZM2G385605","No alias","Zea mays","dentin sialophosphoprotein-related","protein_coding"
"GRMZM2G388987","No alias","Zea mays","ubiquitin-specific protease 19","protein_coding"
"GRMZM2G390221","No alias","Zea mays","nucleic acid binding","protein_coding"
"GRMZM2G395236","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G398680","No alias","Zea mays","hAT dimerisation domain-containing protein / transposase-related","protein_coding"
"GRMZM2G401869","No alias","Zea mays","binding","protein_coding"
"GRMZM2G412899","No alias","Zea mays","Major facilitator superfamily protein","protein_coding"
"GRMZM2G414244","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G418604","No alias","Zea mays","binding;RNA binding","protein_coding"
"GRMZM2G418635","No alias","Zea mays","Pectinacetylesterase family protein","protein_coding"
"GRMZM2G426156","No alias","Zea mays","Leucine-rich repeat protein kinase family protein","protein_coding"
"GRMZM2G428765","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G432557","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G437004","No alias","Zea mays","glutathione synthetase 2","protein_coding"
"GRMZM2G438077","No alias","Zea mays","CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein","protein_coding"
"GRMZM2G448241","No alias","Zea mays","Putative integral membrane protein conserved region (DUF2404)","protein_coding"
"GRMZM2G451357","No alias","Zea mays","ubiquitin-specific protease 5","protein_coding"
"GRMZM2G463891","No alias","Zea mays","Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2","protein_coding"
"GRMZM2G467799","No alias","Zea mays","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"GRMZM2G472708","No alias","Zea mays","expansin-like A3","protein_coding"
"GRMZM2G546081","No alias","Zea mays","UDP-Glycosyltransferase superfamily protein","protein_coding"
"GRMZM2G587368","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM5G800658","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM5G806179","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM5G809743","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM5G810715","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM5G820727","No alias","Zea mays","alpha/beta-Hydrolases superfamily protein","protein_coding"
"GRMZM5G836939","No alias","Zea mays","LMBR1-like membrane protein","protein_coding"
"GRMZM5G854499","No alias","Zea mays","histone mono-ubiquitination 1","protein_coding"
"GRMZM5G855519","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM5G859520","No alias","Zea mays","Function unknown","protein_coding"
"HORVU0Hr1G000030.13","No alias","Hordeum vulgare","associated protein of ESCRT-III complex *(VPS60)","protein_coding"
"HORVU0Hr1G002250.3","No alias","Hordeum vulgare","H-type thioredoxin *(Trx-H)","protein_coding"
"HORVU0Hr1G023480.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU0Hr1G030520.1","No alias","Hordeum vulgare","EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding"
"HORVU0Hr1G035340.1","No alias","Hordeum vulgare","EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding"
"HORVU1Hr1G007460.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G016730.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G045020.9","No alias","Hordeum vulgare","EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"HORVU1Hr1G047610.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G068110.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G069550.1","No alias","Hordeum vulgare","H-type thioredoxin *(Trx-H)","protein_coding"
"HORVU1Hr1G071580.5","No alias","Hordeum vulgare","E3 ubiquitin ligase *(UPL3)","protein_coding"
"HORVU1Hr1G072730.1","No alias","Hordeum vulgare","A-class Rab-GDF protein","protein_coding"
"HORVU1Hr1G074670.8","No alias","Hordeum vulgare","SnRK2 SNF1-related protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"HORVU1Hr1G088370.18","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G022660.2","No alias","Hordeum vulgare","substrate adaptor *(SKIP5) of SCF E3 ubiquitin ligase complex","protein_coding"
"HORVU2Hr1G025580.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G036050.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G045860.9","No alias","Hordeum vulgare","pre-mRNA-processing protein *(PRP39)","protein_coding"
"HORVU2Hr1G065040.1","No alias","Hordeum vulgare","EC_1.10 oxidoreductase acting on diphenol or related substance as donor","protein_coding"
"HORVU2Hr1G069050.1","No alias","Hordeum vulgare","component *(EXO70) of Exocyst complex","protein_coding"
"HORVU2Hr1G071570.17","No alias","Hordeum vulgare","potassium cation transporter *(HAK/KUP/KT)","protein_coding"
"HORVU2Hr1G091130.1","No alias","Hordeum vulgare","thioredoxin *(TRX-M)","protein_coding"
"HORVU2Hr1G101170.2","No alias","Hordeum vulgare","EC_2.4 glycosyltransferase","protein_coding"
"HORVU2Hr1G126470.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G032680.1","No alias","Hordeum vulgare","NAC-type transcription factor","protein_coding"
"HORVU3Hr1G068030.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G073360.17","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G082310.12","No alias","Hordeum vulgare","exoribonuclease *(RAT1/XRN2)","protein_coding"
"HORVU3Hr1G088350.1","No alias","Hordeum vulgare","ubiquitin adaptor protein *(TOL)","protein_coding"
"HORVU3Hr1G107610.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G112850.5","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G117660.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G003910.1","No alias","Hordeum vulgare","bifunctional alpha-L-arabinofuranosidase and beta-D-xylosidase *(BXL) & EC_3.2 glycosylase","protein_coding"
"HORVU4Hr1G006800.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G023680.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G036120.27","No alias","Hordeum vulgare","HUA2-type transcription factor","protein_coding"
"HORVU4Hr1G037670.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G044140.2","No alias","Hordeum vulgare","monogalactosyldiacylglycerol synthase & EC_2.4 glycosyltransferase","protein_coding"
"HORVU4Hr1G068390.6","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G075990.2","No alias","Hordeum vulgare","solute transporter *(MTCC)","protein_coding"
"HORVU4Hr1G081390.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G019000.6","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G021050.13","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G027100.13","No alias","Hordeum vulgare","glutathione synthetase *(GS) & EC_6.3 ligase forming carbon-nitrogen bond","protein_coding"
"HORVU5Hr1G057230.3","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G059910.1","No alias","Hordeum vulgare","U-Box-group-II E3 ubiquitin ligase","protein_coding"
"HORVU5Hr1G096790.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G017000.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G034020.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G056710.1","No alias","Hordeum vulgare","EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen","protein_coding"
"HORVU6Hr1G075730.11","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G076490.9","No alias","Hordeum vulgare","gravity signalling protein factor *(ARG1)","protein_coding"
"HORVU6Hr1G088730.3","No alias","Hordeum vulgare","WAK/WAKL protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"HORVU7Hr1G001030.5","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G041380.4","No alias","Hordeum vulgare","Caleosin-type peroxygenase","protein_coding"
"HORVU7Hr1G052500.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G053230.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G076230.1","No alias","Hordeum vulgare","bifunctional co-chaperone and E3 ubiquitin ligase *(CHIP)","protein_coding"
"HORVU7Hr1G091770.13","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G096830.2","No alias","Hordeum vulgare","ROP-activating protein *(RopGAP)","protein_coding"
"HORVU7Hr1G097490.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G100570.3","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G111810.4","No alias","Hordeum vulgare","Unknown function","protein_coding"
"Kfl00026_0130","kfl00026_0130_v1.1","Klebsormidium nitens","(at1g08640 : 85.9) Chloroplast J-like domain 1 (CJD1); LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 82 Blast hits to 80 proteins in 30 species: Archae - 0; Bacteria - 24; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). & (reliability: 171.8) &  (original description: no original description)","protein_coding"
"Kfl00030_0280","kfl00030_0280_v1.1","Klebsormidium nitens","(o23732|gshb_braju : 532.0) Glutathione synthetase, chloroplast precursor (EC 6.3.2.3) (Glutathione synthase) (GSH synthetase) (GSH-S) - Brassica juncea (Leaf mustard) (Indian mustard) & (at5g27380 : 524.0) Encodes a protein with similarity to glutathione synthetases, which catalyzes one of the early steps in glutathione biosynthesis. Two transcripts have been detected; the longer transcript is less abundant and the protein is localized to the chloroplast. The smaller transcript, in which the transit peptide is truncated, is localized to the cytosol.; glutathione synthetase 2 (GSH2); FUNCTIONS IN: glutathione synthase activity; INVOLVED IN: response to jasmonic acid stimulus, N-terminal protein myristoylation, glutathione biosynthetic process; LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PreATP-grasp-like fold (InterPro:IPR016185), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Glutathione synthase, eukaryotic (InterPro:IPR005615), Glutathione synthase, substrate-binding, eukaryotic (InterPro:IPR004887), Glutathione synthase, alpha-helical, eukaryotic (InterPro:IPR014042); Has 644 Blast hits to 607 proteins in 239 species: Archae - 0; Bacteria - 51; Metazoa - 212; Fungi - 156; Plants - 112; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (reliability: 1048.0) &  (original description: no original description)","protein_coding"
"Kfl00042_g10","kfl00042_g10_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00088_0030","kfl00088_0030_v1.1","Klebsormidium nitens","(at4g30720 : 520.0) Encodes a putative oxidoreductase/electron carrier detected in the chloroplast stroma that is essential to ensure a correct electron flow through the photosynthetic chain and, hence, photosynthesis efficiency and normal growth. Mutations in the Col-0 allele result in pale green pigmentation and defective growth.; FAD/NAD(P)-binding oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity, FAD binding; INVOLVED IN: photosynthesis; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Adrenodoxin reductase (InterPro:IPR000759), FAD dependent oxidoreductase (InterPro:IPR006076), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); Has 2466 Blast hits to 2466 proteins in 951 species: Archae - 126; Bacteria - 2117; Metazoa - 0; Fungi - 2; Plants - 26; Viruses - 0; Other Eukaryotes - 195 (source: NCBI BLink). & (reliability: 1040.0) &  (original description: no original description)","protein_coding"
"Kfl00125_g16","kfl00125_g16_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00133_0170","kfl00133_0170_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00175_0050","kfl00175_0050_v1.1","Klebsormidium nitens","(at1g11800 : 251.0) endonuclease/exonuclease/phosphatase family protein; FUNCTIONS IN: hydrolase activity, zinc ion binding; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135), Zinc finger, RanBP2-type (InterPro:IPR001876); Has 386 Blast hits to 366 proteins in 96 species: Archae - 0; Bacteria - 14; Metazoa - 170; Fungi - 14; Plants - 104; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink). & (reliability: 502.0) &  (original description: no original description)","protein_coding"
"Kfl00215_0120","kfl00215_0120_v1.1","Klebsormidium nitens","(at4g17300 : 600.0) Asparaginyl-tRNA synthetase protein involved in amino acid activation/protein synthesis.; NS1; FUNCTIONS IN: asparagine-tRNA ligase activity; INVOLVED IN: asparaginyl-tRNA aminoacylation, ovule development; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Asparaginyl-tRNA synthetase, class IIb (InterPro:IPR004522), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Aspartyl/Asparaginyl-tRNA synthetase, class IIb (InterPro:IPR002312), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Aminoacyl-tRNA synthetase, class II (D/K/N) (InterPro:IPR004364), Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150); BEST Arabidopsis thaliana protein match is: Class II aminoacyl-tRNA and biotin synthetases superfamily protein (TAIR:AT1G70980.1); Has 19374 Blast hits to 17086 proteins in 2835 species: Archae - 447; Bacteria - 14373; Metazoa - 505; Fungi - 670; Plants - 294; Viruses - 0; Other Eukaryotes - 3085 (source: NCBI BLink). & (reliability: 1200.0) &  (original description: no original description)","protein_coding"
"Kfl00221_0090","kfl00221_0090_v1.1","Klebsormidium nitens","(at4g37280 : 261.0) MRG family protein; FUNCTIONS IN: chromatin binding; INVOLVED IN: chromatin assembly or disassembly; LOCATED IN: chromatin, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone H4 acetyltransferase, NuA4 complex, Eaf3/MRG15 subunit (InterPro:IPR017398), MRG (InterPro:IPR008676), Chromo domain (InterPro:IPR000953); BEST Arabidopsis thaliana protein match is: MRG family protein (TAIR:AT1G02740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 522.0) &  (original description: no original description)","protein_coding"
"Kfl00242_0010","kfl00242_0010_v1.1","Klebsormidium nitens","(at1g08130 : 782.0) Encodes the Arabidopsis DNA ligase 1 that provides the major DNA ligase activity in cells and plays a key role in both DNA replication and excision repair pathways.  Indispensable for cell viability. AtLIG1 expresses one major and two minor mRNA transcripts differing only in the length of the 5' untranslated leader sequences preceding a common ORF. Translation from the first in-frame start codon produces an AtLIG1 isoform that is targeted exclusively to the mitochondria. Translation initiation from the second in-frame start codon produces an AtLIG1 isoform targeted only to the nucleus.; DNA ligase 1 (LIG1); FUNCTIONS IN: DNA binding, DNA ligase (ATP) activity, ATP binding; INVOLVED IN: DNA repair, DNA replication, DNA recombination; LOCATED IN: mitochondrion, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA ligase, N-terminal (InterPro:IPR012308), ATP dependent DNA ligase, central (InterPro:IPR012310), ATP dependent DNA ligase, C-terminal (InterPro:IPR012309), ATP-dependent DNA ligase (InterPro:IPR000977), ATP-dependent DNA ligase, conserved site (InterPro:IPR016059); BEST Arabidopsis thaliana protein match is: ATP-dependent DNA ligase (TAIR:AT1G49250.1); Has 3556 Blast hits to 3521 proteins in 879 species: Archae - 298; Bacteria - 1538; Metazoa - 375; Fungi - 434; Plants - 112; Viruses - 159; Other Eukaryotes - 640 (source: NCBI BLink). & (q7x7e9|dnl4_orysa : 110.0) Putative DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4) - Oryza sativa (Rice) & (reliability: 1564.0) &  (original description: no original description)","protein_coding"
"Kfl00297_0120","kfl00297_0120_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00307_0030","kfl00307_0030_v1.1","Klebsormidium nitens","(at4g15770 : 268.0) RNA binding; FUNCTIONS IN: RNA binding; INVOLVED IN: ribosome assembly, ribosome biogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase/archaeosine transglycosylase-like (InterPro:IPR015947), Ribosome biogenesis factor NIP7-like (InterPro:IPR005155), Pseudouridine synthase/archaeosine transglycosylase (InterPro:IPR002478), Ribosome biogenesis factor, NIP7 (InterPro:IPR016686); Has 438 Blast hits to 438 proteins in 213 species: Archae - 5; Bacteria - 0; Metazoa - 151; Fungi - 132; Plants - 49; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink). & (reliability: 536.0) &  (original description: no original description)","protein_coding"
"Kfl00323_0140","kfl00323_0140_v1.1","Klebsormidium nitens","(at2g45730 : 194.0) eukaryotic initiation factor 3 gamma subunit family protein; FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation, regulation of translational initiation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Eukaryotic initiation factor 3, gamma subunit (InterPro:IPR007316), tRNA (adenine-N(1)-)-methyltransferase, non-catalytic TRM6 subunit (InterPro:IPR017423); Has 402 Blast hits to 378 proteins in 203 species: Archae - 0; Bacteria - 4; Metazoa - 118; Fungi - 152; Plants - 45; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink). & (reliability: 388.0) &  (original description: no original description)","protein_coding"
"Kfl00376_0110","kfl00376_0110_v1.1","Klebsormidium nitens","(at1g24610 : 272.0) Rubisco methyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Rubisco LSMT substrate-binding (InterPro:IPR015353); BEST Arabidopsis thaliana protein match is: plastid transcriptionally active 14 (TAIR:AT4G20130.1); Has 1056 Blast hits to 1053 proteins in 191 species: Archae - 0; Bacteria - 0; Metazoa - 237; Fungi - 281; Plants - 368; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink). & (reliability: 544.0) &  (original description: no original description)","protein_coding"
"Kfl00419_0100","kfl00419_0100_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00614_0040","kfl00614_0040_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00623_0010","kfl00623_0010_v1.1","Klebsormidium nitens","(at4g22720 : 550.0) Actin-like ATPase superfamily protein; FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M22, glycoprotease (InterPro:IPR000905), Peptidase M22, glycoprotease, subgroup (InterPro:IPR017861); BEST Arabidopsis thaliana protein match is: glycoprotease 1 (TAIR:AT2G45270.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1100.0) &  (original description: no original description)","protein_coding"
"Kfl00656_0030","kfl00656_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00756_0020","kfl00756_0020_v1.1","Klebsormidium nitens","(at2g43110 : 115.0) unknown protein; Has 212 Blast hits to 211 proteins in 96 species: Archae - 0; Bacteria - 6; Metazoa - 62; Fungi - 91; Plants - 31; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 230.0) &  (original description: no original description)","protein_coding"
"Kfl00796_0080","kfl00796_0080_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00823_0040","kfl00823_0040_v1.1","Klebsormidium nitens","(at3g21820 : 348.0) histone-lysine N-methyltransferase ATXR2 (ATXR2); FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Zinc finger, MYND-type (InterPro:IPR002893), SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: SET domain group 37 (TAIR:AT2G17900.1); Has 1293 Blast hits to 1280 proteins in 202 species: Archae - 0; Bacteria - 4; Metazoa - 376; Fungi - 353; Plants - 295; Viruses - 0; Other Eukaryotes - 265 (source: NCBI BLink). & (reliability: 696.0) &  (original description: no original description)","protein_coding"
"Kfl00941_0020","kfl00941_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl01722_0010","kfl01722_0010_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"LOC_Os01g01689","No alias","Oryza sativa","phosphatidylinositol 3- and 4-kinase family protein, expressed","protein_coding"
"LOC_Os01g02980","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g04260","No alias","Oryza sativa","fatty acid hydroxylase, putative, expressed","protein_coding"
"LOC_Os01g06590","No alias","Oryza sativa","zinc finger, C3HC4 type domain containing protein, expressed","protein_coding"
"LOC_Os01g09550","No alias","Oryza sativa","no apical meristem protein, putative, expressed","protein_coding"
"LOC_Os01g12720","No alias","Oryza sativa","protein kinase domain containing protein, expressed","protein_coding"
"LOC_Os01g12840","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g16170","No alias","Oryza sativa","PQ loop repeat domain containing protein, expressed","protein_coding"
"LOC_Os01g16330","No alias","Oryza sativa","OsRhmbd2 - Putative Rhomboid homologue, expressed","protein_coding"
"LOC_Os01g21990","No alias","Oryza sativa","CRS2-associated factor 2, chloroplast precursor, putative, expressed","protein_coding"
"LOC_Os01g25484","No alias","Oryza sativa","ferredoxin--nitrite reductase, putative, expressed","protein_coding"
"LOC_Os01g31580","No alias","Oryza sativa","BZIP protein, putative, expressed","protein_coding"
"LOC_Os01g36880","No alias","Oryza sativa","hypothetical protein","protein_coding"
"LOC_Os01g37470","No alias","Oryza sativa","asp/Glu racemase, putative, expressed","protein_coding"
"LOC_Os01g41750","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g42190","No alias","Oryza sativa","heat shock protein DnaJ, putative, expressed","protein_coding"
"LOC_Os01g46850","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g48220","No alias","Oryza sativa","protein of unknown function DUF1421 domain containing protein, expressed","protein_coding"
"LOC_Os01g51640","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g51920","No alias","Oryza sativa","phosphotransferase, putative, expressed","protein_coding"
"LOC_Os01g52390","No alias","Oryza sativa","plasminogen activator inhibitor 1 RNA-binding protein, putative, expressed","protein_coding"
"LOC_Os01g52594","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g55590","No alias","Oryza sativa","AMP-binding enzyme, putative, expressed","protein_coding"
"LOC_Os01g55830","No alias","Oryza sativa","glutathione S-transferase, putative, expressed","protein_coding"
"LOC_Os01g56890","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g57560","No alias","Oryza sativa","serine/threonine-protein kinase receptor precursor, putative, expressed","protein_coding"
"LOC_Os01g57720","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g68380","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g69840","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g70770","No alias","Oryza sativa","glutathione S-transferase, putative, expressed","protein_coding"
"LOC_Os01g71200","No alias","Oryza sativa","RNA recognition motif containing protein, putative, expressed","protein_coding"
"LOC_Os02g02980","No alias","Oryza sativa","MATE domain containing protein, expressed","protein_coding"
"LOC_Os02g03670","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g07210","No alias","Oryza sativa","OTU-like cysteine protease family protein, putative, expressed","protein_coding"
"LOC_Os02g07350","No alias","Oryza sativa","inositol-1-monophosphatase, putative, expressed","protein_coding"
"LOC_Os02g10930","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g13350","No alias","Oryza sativa","hydrolase, NUDIX family, domain containing protein, expressed","protein_coding"
"LOC_Os02g21430","No alias","Oryza sativa","AML1, putative, expressed","protein_coding"
"LOC_Os02g27490","No alias","Oryza sativa","bile acid sodium symporter family protein, putative, expressed","protein_coding"
"LOC_Os02g28074","No alias","Oryza sativa","XRN 5-3 exonuclease N-terminus family protein, expressed","protein_coding"
"LOC_Os02g28870","No alias","Oryza sativa","U-box domain-containing protein, putative, expressed","protein_coding"
"LOC_Os02g32504","No alias","Oryza sativa","heparan-alpha-glucosaminide N-acetyltransferase, putative, expressed","protein_coding"
"LOC_Os02g32760","No alias","Oryza sativa","60S acidic ribosomal protein, putative, expressed","protein_coding"
"LOC_Os02g33380","No alias","Oryza sativa","pectinesterase inhibitor domain containing protein, putative, expressed","protein_coding"
"LOC_Os02g34610","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g34860","No alias","Oryza sativa","Regulator of chromosome condensation domain containing protein, expressed","protein_coding"
"LOC_Os02g38160","No alias","Oryza sativa","glycosyl transferase family 17 protein, putative, expressed","protein_coding"
"LOC_Os02g39600","No alias","Oryza sativa","outer envelope protein, putative, expressed","protein_coding"
"LOC_Os02g40510","No alias","Oryza sativa","response regulator receiver domain containing protein, expressed","protein_coding"
"LOC_Os02g43290","No alias","Oryza sativa","protein kinase domain containing protein, expressed","protein_coding"
"LOC_Os02g46962","No alias","Oryza sativa","VHS and GAT domain containing protein, expressed","protein_coding"
"LOC_Os02g47310","No alias","Oryza sativa","Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed","protein_coding"
"LOC_Os02g47460","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g48770","No alias","Oryza sativa","SAM dependent carboxyl methyltransferase, putative, expressed","protein_coding"
"LOC_Os02g52280","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g52305","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g53350","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g53400","No alias","Oryza sativa","thioredoxin, putative, expressed","protein_coding"
"LOC_Os02g55430","No alias","Oryza sativa","alginate regulatory protein AlgP, putative, expressed","protein_coding"
"LOC_Os02g55560","No alias","Oryza sativa","protein phosphatase 2C, putative, expressed","protein_coding"
"LOC_Os03g01014","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g01110","No alias","Oryza sativa","RNA methyltransferase, TrmH family protein, putative, expressed","protein_coding"
"LOC_Os03g01240","No alias","Oryza sativa","CCR4-Not complex component, Not1domain containing protein, expressed","protein_coding"
"LOC_Os03g03730","No alias","Oryza sativa","regulatory protein, putative, expressed","protein_coding"
"LOC_Os03g04020","No alias","Oryza sativa","expansin precursor, putative, expressed","protein_coding"
"LOC_Os03g04270","No alias","Oryza sativa","OsFBL10 - F-box domain and LRR containing protein, expressed","protein_coding"
"LOC_Os03g04750","No alias","Oryza sativa","60S ribosomal protein L21-2, putative, expressed","protein_coding"
"LOC_Os03g05020","No alias","Oryza sativa","PIR, putative, expressed","protein_coding"
"LOC_Os03g05300","No alias","Oryza sativa","cyclin-dependent kinases regulatory subunit 1, putative, expressed","protein_coding"
"LOC_Os03g05490","No alias","Oryza sativa","ZOS3-02 - C2H2 zinc finger protein, expressed","protein_coding"
"LOC_Os03g05900","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g06090","No alias","Oryza sativa","high-affinity nickel-transport family protein, putative, expressed","protein_coding"
"LOC_Os03g06410","No alias","Oryza sativa","protein kinase domain containing protein, expressed","protein_coding"
"LOC_Os03g11420","No alias","Oryza sativa","Os3bglu6 - beta-glucosidase/beta-fucosidase/beta-galactosidase, expressed","protein_coding"
"LOC_Os03g14090","No alias","Oryza sativa","armadillo/beta-catenin repeat family protein, putative, expressed","protein_coding"
"LOC_Os03g15020","No alias","Oryza sativa","beta-galactosidase precursor, putative, expressed","protein_coding"
"LOC_Os03g17310","No alias","Oryza sativa","calcium-transporting ATPase, endoplasmic reticulum-type, putative, expressed","protein_coding"
"LOC_Os03g19020","No alias","Oryza sativa","PHD-finger family protein, expressed","protein_coding"
"LOC_Os03g21850","No alias","Oryza sativa","nucleotidyltransferase, putative, expressed","protein_coding"
"LOC_Os03g22230","No alias","Oryza sativa","POEI47 - Pollen Ole e I allergen and extensin family protein precursor, expressed","protein_coding"
"LOC_Os03g27280","No alias","Oryza sativa","CAMK_CAMK_like.19 - CAMK includes calcium/calmodulin depedent protein kinases, expressed","protein_coding"
"LOC_Os03g30610","No alias","Oryza sativa","ubiquinone oxidoreductase, putative, expressed","protein_coding"
"LOC_Os03g33200","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g38540","No alias","Oryza sativa","folic acid binding protein, putative, expressed","protein_coding"
"LOC_Os03g38950","No alias","Oryza sativa","chloroplast post-illumination chlorophyll fluorescence increase protein, putative, expressed","protein_coding"
"LOC_Os03g41438","No alias","Oryza sativa","serpin domain containing protein, putative, expressed","protein_coding"
"LOC_Os03g47610","No alias","Oryza sativa","thiamine biosynthesis protein thiC, putative, expressed","protein_coding"
"LOC_Os03g50120","No alias","Oryza sativa","zinc finger family protein, putative, expressed","protein_coding"
"LOC_Os03g50130","No alias","Oryza sativa","microsomal glutathione S-transferase 3, putative, expressed","protein_coding"
"LOC_Os03g51170","No alias","Oryza sativa","hypothetical protein","protein_coding"
"LOC_Os03g55100","No alias","Oryza sativa","cyclic nucleotide-gated ion channel 2, putative, expressed","protein_coding"
"LOC_Os03g55240","No alias","Oryza sativa","cytochrome P450, putative, expressed","protein_coding"
"LOC_Os03g55590","No alias","Oryza sativa","MYB family transcription factor, putative, expressed","protein_coding"
"LOC_Os03g55770","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g55776","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g55820","No alias","Oryza sativa","thioredoxin, putative, expressed","protein_coding"
"LOC_Os03g55890","No alias","Oryza sativa","ternary complex factor MIP1, putative, expressed","protein_coding"
"LOC_Os03g56900","No alias","Oryza sativa","reticulon domain containing protein, putative, expressed","protein_coding"
"LOC_Os03g57290","No alias","Oryza sativa","cullin, putative, expressed","protein_coding"
"LOC_Os03g58080","No alias","Oryza sativa","BT1 family protein, putative, expressed","protein_coding"
"LOC_Os03g58960","No alias","Oryza sativa","DHHC zinc finger domain containing protein, expressed","protein_coding"
"LOC_Os03g63020","No alias","Oryza sativa","protein kinase domain containing protein, expressed","protein_coding"
"LOC_Os04g10924","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os04g11400","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os04g22720","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os04g27790","No alias","Oryza sativa","terpene synthase, putative, expressed","protein_coding"
"LOC_Os04g34600","No alias","Oryza sativa","abscisic stress-ripening, putative, expressed","protein_coding"
"LOC_Os04g37490","No alias","Oryza sativa","oxidoreductase, aldo/keto reductase family protein, putative, expressed","protein_coding"
"LOC_Os04g37760","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os04g39460","No alias","Oryza sativa","NBS-LRR type disease resistance protein, putative, expressed","protein_coding"
"LOC_Os04g39540","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os04g40450","No alias","Oryza sativa","retrotransposon protein, putative, unclassified, expressed","protein_coding"
"LOC_Os04g42784","No alias","Oryza sativa","DNA mismatch repair protein, putative, expressed","protein_coding"
"LOC_Os04g43420","No alias","Oryza sativa","PTAC5, putative, expressed","protein_coding"
"LOC_Os04g47780","No alias","Oryza sativa","transmembrane amino acid transporter protein, putative, expressed","protein_coding"
"LOC_Os04g52100","No alias","Oryza sativa","peptidase, M24 family protein, putative, expressed","protein_coding"
"LOC_Os04g53660","No alias","Oryza sativa","transposon protein, putative, unclassified, expressed","protein_coding"
"LOC_Os04g58030","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os04g58734","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os04g58890","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os04g59560","No alias","Oryza sativa","tubulin folding cofactor B, putative, expressed","protein_coding"
"LOC_Os05g01240","No alias","Oryza sativa","AML1, putative, expressed","protein_coding"
"LOC_Os05g01570","No alias","Oryza sativa","auxin-induced protein 5NG4, putative, expressed","protein_coding"
"LOC_Os05g02250","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os05g02710","No alias","Oryza sativa","retrotransposon protein, putative, unclassified, expressed","protein_coding"
"LOC_Os05g04530","No alias","Oryza sativa","IF, putative, expressed","protein_coding"
"LOC_Os05g05020","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os05g05040","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os05g05480","No alias","Oryza sativa","OsDegp6 - Putative Deg protease homologue, expressed","protein_coding"
"LOC_Os05g07730","No alias","Oryza sativa","retrotransposon protein, putative, unclassified, expressed","protein_coding"
"LOC_Os05g08810","No alias","Oryza sativa","phosphatidylinositol 3-kinase, root isoform, putative, expressed","protein_coding"
"LOC_Os05g11770","No alias","Oryza sativa","ulp1 protease family protein, putative, expressed","protein_coding"
"LOC_Os05g12500","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os05g14270","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os05g16824","No alias","Oryza sativa","SHR5-receptor-like kinase, putative, expressed","protein_coding"
"LOC_Os05g18770","No alias","Oryza sativa","Sad1 / UNC-like C-terminal domain containing protein, putative, expressed","protein_coding"
"LOC_Os05g25400","No alias","Oryza sativa","RNA binding protein, putative, expressed","protein_coding"
"LOC_Os05g27780","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os05g28300","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os05g30980","No alias","Oryza sativa","RNA recognition motif containing protein, putative, expressed","protein_coding"
"LOC_Os05g32330","No alias","Oryza sativa","endonuclease/exonuclease/phosphatase family domain containing protein, expressed","protein_coding"
"LOC_Os05g33810","No alias","Oryza sativa","OsSPL9 - SBP-box gene family member, expressed","protein_coding"
"LOC_Os05g35140","No alias","Oryza sativa","nodulin MtN3 family protein, putative, expressed","protein_coding"
"LOC_Os05g37470","No alias","Oryza sativa","transmembrane amino acid transporter protein, putative, expressed","protein_coding"
"LOC_Os05g38710","No alias","Oryza sativa","lipin, N-terminal conserved region family protein, expressed","protein_coding"
"LOC_Os05g43540","No alias","Oryza sativa","transmembrane protein 56, putative, expressed","protein_coding"
"LOC_Os05g45210","No alias","Oryza sativa","respiratory burst oxidase, putative, expressed","protein_coding"
"LOC_Os05g47560","No alias","Oryza sativa","serine/threonine-protein kinase SNT7, chloroplast precursor, putative, expressed","protein_coding"
"LOC_Os05g47850","No alias","Oryza sativa","chloroplastic group IIA intron splicing facilitator CRS1, chloroplast precursor, putative, expressed","protein_coding"
"LOC_Os05g49060","No alias","Oryza sativa","uncharacterized protein ycf23, putative, expressed","protein_coding"
"LOC_Os05g51150","No alias","Oryza sativa","RNA polymerase sigma factor, putative, expressed","protein_coding"
"LOC_Os06g04090","No alias","Oryza sativa","no apical meristem protein, putative, expressed","protein_coding"
"LOC_Os06g04510","No alias","Oryza sativa","enolase, putative, expressed","protein_coding"
"LOC_Os06g09100","No alias","Oryza sativa","retrotransposon protein, putative, unclassified","protein_coding"
"LOC_Os06g09220","No alias","Oryza sativa","cytochrome P450 72A1, putative, expressed","protein_coding"
"LOC_Os06g09810","No alias","Oryza sativa","ethylene-responsive transcription factor, putative, expressed","protein_coding"
"LOC_Os06g11180","No alias","Oryza sativa","OsPOP12 - Putative Prolyl Oligopeptidase homologue, expressed","protein_coding"
"LOC_Os06g11920","No alias","Oryza sativa","endonuclease/exonuclease/phosphatase family domain containing protein, expressed","protein_coding"
"LOC_Os06g13650","No alias","Oryza sativa","alpha-mannosidase 2, putative, expressed","protein_coding"
"LOC_Os06g16050","No alias","Oryza sativa","transposon protein, putative, CACTA, En/Spm sub-class, expressed","protein_coding"
"LOC_Os06g21369","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os06g27560","No alias","Oryza sativa","glycosyltransferase protein, putative, expressed","protein_coding"
"LOC_Os06g37560","No alias","Oryza sativa","beta-galactosidase precursor, putative, expressed","protein_coding"
"LOC_Os06g38340","No alias","Oryza sativa","receptor-like protein kinase precursor, putative, expressed","protein_coding"
"LOC_Os06g46570","No alias","Oryza sativa","galactosyltransferase, putative, expressed","protein_coding"
"LOC_Os06g48880","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os07g01550","No alias","Oryza sativa","leucine rich repeat domain containing protein, putative, expressed","protein_coding"
"LOC_Os07g02210","No alias","Oryza sativa","eukaryotic translation initiation factor 5A, putative, expressed","protein_coding"
"LOC_Os07g07320","No alias","Oryza sativa","glutathione S-transferase, putative, expressed","protein_coding"
"LOC_Os07g07470","No alias","Oryza sativa","transketolase, putative, expressed","protein_coding"
"LOC_Os07g08950","No alias","Oryza sativa","FAD-linked oxidoreductase protein, putative, expressed","protein_coding"
"LOC_Os07g13880","No alias","Oryza sativa","soluble starch synthase 2-3, chloroplast precursor, putative, expressed","protein_coding"
"LOC_Os07g19460","No alias","Oryza sativa","mitochondrial carrier protein, putative, expressed","protein_coding"
"LOC_Os07g26520","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os07g32670","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os07g32761","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os07g36390","No alias","Oryza sativa","PPR repeat containing protein, expressed","protein_coding"
"LOC_Os07g38440","No alias","Oryza sativa","uncharacterized 50.6 kDa protein in the 5region of gyrA and gyrB, putative, expressed","protein_coding"
"LOC_Os07g39480","No alias","Oryza sativa","WRKY87, expressed","protein_coding"
"LOC_Os07g40640","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os07g41290","No alias","Oryza sativa","DEFL13 - Defensin and Defensin-like DEFL family, expressed","protein_coding"
"LOC_Os07g43560","No alias","Oryza sativa","TKL_IRAK_DUF26-lc.24 - DUF26 kinases have homology to DUF26 containing loci, expressed","protein_coding"
"LOC_Os07g43570","No alias","Oryza sativa","TKL_IRAK_DUF26-lc.25 - DUF26 kinases have homology to DUF26 containing loci, expressed","protein_coding"
"LOC_Os07g43810","No alias","Oryza sativa","RNA recognition motif containing protein, putative, expressed","protein_coding"
"LOC_Os07g44610","No alias","Oryza sativa","pyrrolidone-carboxylate peptidase, putative, expressed","protein_coding"
"LOC_Os07g45064","No alias","Oryza sativa","Phosphatidylinositol kinase and FAT containing domain protein, putative, expressed","protein_coding"
"LOC_Os08g01270","No alias","Oryza sativa","protein kinase family protein, putative, expressed","protein_coding"
"LOC_Os08g02490","No alias","Oryza sativa","AT hook motif domain containing protein, expressed","protein_coding"
"LOC_Os08g04360","No alias","Oryza sativa","plastocyanin-like domain containing protein, putative, expressed","protein_coding"
"LOC_Os08g04670","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os08g07290","No alias","Oryza sativa","HEAT repeat family protein, putative, expressed","protein_coding"
"LOC_Os08g09270","No alias","Oryza sativa","pentatricopeptide, putative, expressed","protein_coding"
"LOC_Os08g10630","No alias","Oryza sativa","metal cation transporter, putative, expressed","protein_coding"
"LOC_Os08g16930","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os08g25624","No alias","Oryza sativa","phosphate/phosphate translocator, putative, expressed","protein_coding"
"LOC_Os08g30580","No alias","Oryza sativa","hypothetical protein","protein_coding"
"LOC_Os08g36140","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os08g43320","No alias","Oryza sativa","OsRhmbd14 - Putative Rhomboid homologue, expressed","protein_coding"
"LOC_Os08g45160","No alias","Oryza sativa","TENA/THI-4 family protein, putative, expressed","protein_coding"
"LOC_Os09g09360","No alias","Oryza sativa","esterase/lipase/thioesterase, putative, expressed","protein_coding"
"LOC_Os09g21360","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os09g26910","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os09g28500","No alias","Oryza sativa","EF hand family protein, putative, expressed","protein_coding"
"LOC_Os09g31514","No alias","Oryza sativa","dihydroflavonol-4-reductase, putative, expressed","protein_coding"
"LOC_Os09g33650","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os09g38580","No alias","Oryza sativa","cyclic nucleotide-gated ion channel, putative, expressed","protein_coding"
"LOC_Os10g03440","No alias","Oryza sativa","avr9/Cf-9 rapidly elicited protein 74, putative, expressed","protein_coding"
"LOC_Os10g03830","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os10g07229","No alias","Oryza sativa","dehydrogenase, putative, expressed","protein_coding"
"LOC_Os10g36500","No alias","Oryza sativa","invertase/pectin methylesterase inhibitor family protein, putative, expressed","protein_coding"
"LOC_Os10g38910","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os10g42830","No alias","Oryza sativa","transporter family protein, putative, expressed","protein_coding"
"LOC_Os11g04954","No alias","Oryza sativa","DNA repair protein Rad51, putative, expressed","protein_coding"
"LOC_Os11g06130","No alias","Oryza sativa","PHD-finger family protein, expressed","protein_coding"
"LOC_Os11g11580","No alias","Oryza sativa","NB-ARC domain containing protein, expressed","protein_coding"
"LOC_Os11g30400","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os11g31470","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os11g32880","No alias","Oryza sativa","DEAD-box ATP-dependent RNA helicase, putative, expressed","protein_coding"
"LOC_Os11g34460","No alias","Oryza sativa","OsFBO10 - F-box and other domain containing protein, expressed","protein_coding"
"LOC_Os11g42350","No alias","Oryza sativa","glutathione synthetase, chloroplast precursor, putative, expressed","protein_coding"
"LOC_Os11g43970","No alias","Oryza sativa","AAA-type ATPase family protein, putative, expressed","protein_coding"
"LOC_Os12g03270","No alias","Oryza sativa","ELMO/CED-12 family protein, putative, expressed","protein_coding"
"LOC_Os12g07550","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os12g13890","No alias","Oryza sativa","retrotransposon protein, putative, unclassified, expressed","protein_coding"
"LOC_Os12g16200","No alias","Oryza sativa","glutathione synthetase, chloroplast precursor, putative, expressed","protein_coding"
"LOC_Os12g18360","No alias","Oryza sativa","NB-ARC domain containing protein, expressed","protein_coding"
"LOC_Os12g18650","No alias","Oryza sativa","Regulator of chromosome condensation domain containing protein, expressed","protein_coding"
"LOC_Os12g32470","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os12g34330","No alias","Oryza sativa","protein binding protein, putative, expressed","protein_coding"
"LOC_Os12g34380","No alias","Oryza sativa","glutathione synthetase, chloroplast precursor, putative, expressed","protein_coding"
"LOC_Os12g37360","No alias","Oryza sativa","miro, putative, expressed","protein_coding"
"LOC_Os12g43870","No alias","Oryza sativa","expressed protein","protein_coding"
"MA_10426252g0010","No alias","Picea abies","(at5g60590 : 179.0) DHBP synthase RibB-like alpha/beta domain; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sua5/YciO/YrdC/YwlC (InterPro:IPR004388), DHBP synthase RibB-like alpha/beta domain (InterPro:IPR017945), Sua5/YciO/YrdC, N-terminal (InterPro:IPR006070); BEST Arabidopsis thaliana protein match is: DHBP synthase RibB-like alpha/beta domain (TAIR:AT3G01920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 358.0) &  (original description: no original description)","protein_coding"
"MA_10426544g0020","No alias","Picea abies","(p34924|g3pc_pinsy : 278.0) Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (EC 1.2.1.12) - Pinus sylvestris (Scots pine) & (at3g04120 : 259.0) encodes cytosolic GADPH (C subunit) involved in the glycolytic pathway but also interacts with H2O2 potentially placing it in a signalling cascade induced by ROS.; glyceraldehyde-3-phosphate dehydrogenase C subunit 1 (GAPC1); FUNCTIONS IN: glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity, copper ion binding, glyceraldehyde-3-phosphate dehydrogenase activity; INVOLVED IN: in 11 processes; LOCATED IN: in 8 components; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase family (InterPro:IPR020831), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain, subgroup (InterPro:IPR020832), Glyceraldehyde 3-phosphate dehydrogenase, active site (InterPro:IPR020830), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828); BEST Arabidopsis thaliana protein match is: glyceraldehyde-3-phosphate dehydrogenase C2 (TAIR:AT1G13440.1); Has 25372 Blast hits to 25360 proteins in 6350 species: Archae - 71; Bacteria - 10995; Metazoa - 2358; Fungi - 2851; Plants - 3864; Viruses - 0; Other Eukaryotes - 5233 (source: NCBI BLink). & (reliability: 474.0) &  (original description: no original description)","protein_coding"
"MA_10433286g0010","No alias","Picea abies","(at3g10420 : 197.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G73170.1); Has 1500 Blast hits to 1489 proteins in 625 species: Archae - 20; Bacteria - 1170; Metazoa - 12; Fungi - 5; Plants - 122; Viruses - 0; Other Eukaryotes - 171 (source: NCBI BLink). & (reliability: 394.0) &  (original description: no original description)","protein_coding"
"MA_10435674g0010","No alias","Picea abies","(o23732|gshb_braju : 332.0) Glutathione synthetase, chloroplast precursor (EC 6.3.2.3) (Glutathione synthase) (GSH synthetase) (GSH-S) - Brassica juncea (Leaf mustard) (Indian mustard) & (at5g27380 : 325.0) Encodes a protein with similarity to glutathione synthetases, which catalyzes one of the early steps in glutathione biosynthesis. Two transcripts have been detected; the longer transcript is less abundant and the protein is localized to the chloroplast. The smaller transcript, in which the transit peptide is truncated, is localized to the cytosol.; glutathione synthetase 2 (GSH2); FUNCTIONS IN: glutathione synthase activity; INVOLVED IN: response to jasmonic acid stimulus, N-terminal protein myristoylation, glutathione biosynthetic process; LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PreATP-grasp-like fold (InterPro:IPR016185), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Glutathione synthase, eukaryotic (InterPro:IPR005615), Glutathione synthase, substrate-binding, eukaryotic (InterPro:IPR004887), Glutathione synthase, alpha-helical, eukaryotic (InterPro:IPR014042); Has 644 Blast hits to 607 proteins in 239 species: Archae - 0; Bacteria - 51; Metazoa - 212; Fungi - 156; Plants - 112; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (reliability: 650.0) &  (original description: no original description)","protein_coding"
"MA_10435864g0010","No alias","Picea abies","(at4g34730 : 184.0) ribosome-binding factor A family protein; FUNCTIONS IN: RNA binding; INVOLVED IN: rRNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosome-binding factor A, conserved site (InterPro:IPR020053), K homology-like, alpha/beta (InterPro:IPR015946), Ribosome-binding factor A (InterPro:IPR000238); Has 4827 Blast hits to 4826 proteins in 1979 species: Archae - 0; Bacteria - 4129; Metazoa - 5; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 652 (source: NCBI BLink). & (reliability: 368.0) &  (original description: no original description)","protein_coding"
"MA_10436042g0030","No alias","Picea abies","(at4g04950 : 397.0) thioredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336), Glutaredoxin-related protein (InterPro:IPR004480); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT4G32580.1); Has 26535 Blast hits to 17137 proteins in 2757 species: Archae - 249; Bacteria - 14010; Metazoa - 1647; Fungi - 1426; Plants - 1759; Viruses - 3; Other Eukaryotes - 7441 (source: NCBI BLink). & (reliability: 794.0) &  (original description: no original description)","protein_coding"
"MA_10437223g0020","No alias","Picea abies","(at1g53520 : 194.0) Chalcone-flavanone isomerase family protein; FUNCTIONS IN: chalcone isomerase activity, intramolecular lyase activity; INVOLVED IN: cellular amino acid derivative biosynthetic process, flavonoid biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT3G55120.1); Has 396 Blast hits to 396 proteins in 76 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 2; Plants - 376; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (reliability: 388.0) &  (original description: no original description)","protein_coding"
"MA_15889g0020","No alias","Picea abies","(at4g24620 : 758.0) The PGI1 gene encodes the plastid phospho-glucose (Glc) isomerase. While pgi1-1 mutant has a deficiency in leaf starch synthesis, it accumulates starch in root cap cells. Flowering time of the pgi1-1 mutant is significantly delayed under short-day conditions.; phosphoglucose isomerase 1 (PGI1); FUNCTIONS IN: glucose-6-phosphate isomerase activity; INVOLVED IN: positive regulation of flower development, starch metabolic process; LOCATED IN: cytosol, chloroplast, plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglucose isomerase, conserved site (InterPro:IPR018189), Phosphoglucose isomerase (PGI) (InterPro:IPR001672); BEST Arabidopsis thaliana protein match is: Sugar isomerase (SIS) family protein (TAIR:AT5G42740.1); Has 10976 Blast hits to 10974 proteins in 3405 species: Archae - 60; Bacteria - 6731; Metazoa - 613; Fungi - 158; Plants - 999; Viruses - 0; Other Eukaryotes - 2415 (source: NCBI BLink). & (p42862|g6pia_orysa : 133.0) Glucose-6-phosphate isomerase, cytosolic A (EC 5.3.1.9) (GPI-A) (Phosphoglucose isomerase A) (PGI-A) (Phosphohexose isomerase A) (PHI-A) - Oryza sativa (Rice) & (reliability: 1516.0) &  (original description: no original description)","protein_coding"
"MA_174635g0010","No alias","Picea abies","(at3g10840 : 382.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; LOCATED IN: chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G15490.1); Has 7044 Blast hits to 6961 proteins in 1208 species: Archae - 69; Bacteria - 5119; Metazoa - 311; Fungi - 102; Plants - 308; Viruses - 4; Other Eukaryotes - 1131 (source: NCBI BLink). & (reliability: 764.0) &  (original description: no original description)","protein_coding"
"MA_19782g0010","No alias","Picea abies","(o81263|kith_orysa : 279.0) Thymidine kinase (EC 2.7.1.21) - Oryza sativa (Rice) & (at3g07800 : 267.0) Thymidine kinase; FUNCTIONS IN: thymidine kinase activity, ATP binding; INVOLVED IN: pyrimidine deoxyribonucleoside interconversion, anaerobic respiration; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thymidine kinase (InterPro:IPR001267), Thymidine kinase, conserved site (InterPro:IPR020633); BEST Arabidopsis thaliana protein match is: Thymidine kinase (TAIR:AT5G23070.1); Has 4049 Blast hits to 4037 proteins in 1500 species: Archae - 38; Bacteria - 2547; Metazoa - 142; Fungi - 7; Plants - 74; Viruses - 356; Other Eukaryotes - 885 (source: NCBI BLink). & (reliability: 534.0) &  (original description: no original description)","protein_coding"
"MA_282013g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_323670g0010","No alias","Picea abies",""(q94iw5|c90d2_orysa : 249.0) Cytochrome P450 90D2 (EC 1.14.-.-) (C6-oxidase) - Oryza sativa (Rice) & (at3g13730 : 226.0) Encodes a cytochrome P-450 gene that is involved in brassinosteroid biosynthesis, most likely in the conversion step of teasterone (TE) to 3-dehydroteasterone (3DT), and/or 6-deoxoteasterone (6-deoxoTE) to 6-deoxo-3-dehydroteasterone (6-deoxo3DT); or the conversion of cathasterone (CT) to TE, and/or 6-deoxocathasterone (6-deoxoCT) to 6-deoxoTE. Recently, CYP90D1 was shown to catalyse the C-23 hydroxylation of several brassinosteroids (the enzyme has a broad specificity for 22-hydroxylated substrates). Member of the CYP90C CYP450 family. Similar to Cytochrome P450 90C1 (ROT3).; ""cytochrome P450, family 90, subfamily D, polypeptide 1"" (CYP90D1); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen, oxygen binding; INVOLVED IN: stamen development, petal development, leaf development, brassinosteroid biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT4G36380.1); Has 27722 Blast hits to 27661 proteins in 1582 species: Archae - 80; Bacteria - 4717; Metazoa - 10119; Fungi - 4209; Plants - 7293; Viruses - 6; Other Eukaryotes - 1298 (source: NCBI BLink). & (reliability: 452.0) &  (original description: no original description)"","protein_coding"
"MA_381033g0010","No alias","Picea abies","(at3g25530 : 155.0) Encodes gamma-hydroxybutyrate dehydrogenase (AtGHBDH).  Contains a NADP-binding domain.  GHBDH is proposed to function in oxidative stress tolerance.; glyoxylate reductase 1 (GLYR1); FUNCTIONS IN: 3-hydroxybutyrate dehydrogenase activity, phosphogluconate dehydrogenase (decarboxylating) activity; INVOLVED IN: response to oxidative stress; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 6-phosphogluconate dehydrogenase, NAD-binding (InterPro:IPR006115), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), 3-hydroxyacid dehydrogenase/reductase (InterPro:IPR015815), NAD(P)-binding domain (InterPro:IPR016040), 3-hydroxyisobutyrate dehydrogenase-related, conserved site (InterPro:IPR002204); BEST Arabidopsis thaliana protein match is: glyoxylate reductase 2 (TAIR:AT1G17650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 310.0) &  (original description: no original description)","protein_coding"
"MA_399736g0010","No alias","Picea abies","(at5g64380 : 311.0) Inositol monophosphatase family protein; FUNCTIONS IN: phosphoric ester hydrolase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fructose-1,6-bisphosphatase (InterPro:IPR000146); BEST Arabidopsis thaliana protein match is: high cyclic electron flow 1 (TAIR:AT3G54050.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p22418|f16p1_spiol : 172.0) Fructose-1,6-bisphosphatase, chloroplast precursor (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase) (FBPase) - Spinacia oleracea (Spinach) & (reliability: 622.0) &  (original description: no original description)","protein_coding"
"MA_42312g0010","No alias","Picea abies","(q5n9j9|phyk2_orysa : 235.0) Probable phytol kinase 2, chloroplast precursor (EC 2.7.-.-) (Fragment) - Oryza sativa (Rice) & (at5g58560 : 219.0) Phosphatidate cytidylyltransferase family protein; FUNCTIONS IN: phosphatidate cytidylyltransferase activity, transferase activity, transferring phosphorus-containing groups; INVOLVED IN: phospholipid biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidate cytidylyltransferase (InterPro:IPR000374); BEST Arabidopsis thaliana protein match is: vitamin E pathway gene 5 (TAIR:AT5G04490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 438.0) &  (original description: no original description)","protein_coding"
"MA_45640g0010","No alias","Picea abies","(at3g56240 : 120.0) CCH protein belongs to a family of eukaryotic proteins that participate in  intracellular copper homeostasis by delivering this metal to the secretory pathway; mainly located along the vascular bundles of senescing leaves and petioles as well as in stem sieve elements; hypothesized  to have a role in copper mobilization from decaying organs towards reproductive structures, as a result of metalloprotein breakdown. The plant-specific C-terminal domain of the CCH protein forms amyloid-like fibrils in vitro.; copper chaperone (CCH); FUNCTIONS IN: copper chaperone activity; INVOLVED IN: in 6 processes; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: homolog of anti-oxidant 1 (TAIR:AT1G66240.1); Has 2051 Blast hits to 1937 proteins in 366 species: Archae - 10; Bacteria - 382; Metazoa - 168; Fungi - 207; Plants - 1221; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). & (reliability: 240.0) &  (original description: no original description)","protein_coding"
"MA_495935g0010","No alias","Picea abies","(at1g12770 : 514.0) Encodes a DEAD-box RNA helicase that  localizes to mitochondria and is essential for regulating cell-to-cell transport via plasmodesmata.; embryo defective 1586 (EMB1586); FUNCTIONS IN: RNA helicase activity; INVOLVED IN: plasmodesma organization, plasmodesmata-mediated intercellular transport, embryo development ending in seed dormancy; LOCATED IN: mitochondrion; EXPRESSED IN: embryo, root, flower, shoot meristem; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 38833 Blast hits to 38121 proteins in 2993 species: Archae - 753; Bacteria - 18819; Metazoa - 5837; Fungi - 4441; Plants - 2445; Viruses - 12; Other Eukaryotes - 6526 (source: NCBI BLink). & (p41378|if4a_wheat : 141.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Triticum aestivum (Wheat) & (reliability: 1028.0) &  (original description: no original description)","protein_coding"
"MA_710226g0010","No alias","Picea abies","(at3g10840 : 137.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; LOCATED IN: chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G15490.1); Has 7044 Blast hits to 6961 proteins in 1208 species: Archae - 69; Bacteria - 5119; Metazoa - 311; Fungi - 102; Plants - 308; Viruses - 4; Other Eukaryotes - 1131 (source: NCBI BLink). & (reliability: 274.0) &  (original description: no original description)","protein_coding"
"MA_8784390g0010","No alias","Picea abies","(at3g07700 : 200.0) Protein kinase superfamily protein; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: ABC2 homolog 13 (TAIR:AT5G64940.2). & (reliability: 400.0) &  (original description: no original description)","protein_coding"
"MA_8889264g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_894439g0010","No alias","Picea abies","(at2g30100 : 382.0) pentatricopeptide (PPR) repeat-containing protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT5G04810.1); Has 68862 Blast hits to 30982 proteins in 1167 species: Archae - 27; Bacteria - 7834; Metazoa - 26033; Fungi - 2446; Plants - 28670; Viruses - 2; Other Eukaryotes - 3850 (source: NCBI BLink). & (reliability: 764.0) &  (original description: no original description)","protein_coding"
"Mp1g05330.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g19400.1","No alias","Marchantia polymorpha","LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana (sp|c0lgq5|gso1_arath : 432.0) & Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group(50.2.7 : 105.6)","protein_coding"
"Mp1g19480.1","No alias","Marchantia polymorpha","assembly factor CIA1 of cytosolic CIA system transfer phase","protein_coding"
"Mp1g28380.1","No alias","Marchantia polymorpha","glutathione synthetase (GS)","protein_coding"
"Mp2g06000.1","No alias","Marchantia polymorpha","component BAF255/170 of chromatin remodeling complex","protein_coding"
"Mp2g10300.1","No alias","Marchantia polymorpha","F-box protein SKIP1 OS=Arabidopsis thaliana (sp|q9fdx1|skip1_arath : 128.0)","protein_coding"
"Mp2g13040.1","No alias","Marchantia polymorpha","F-box/kelch-repeat protein At1g55270 OS=Arabidopsis thaliana (sp|q93w93|fbk22_arath : 103.0)","protein_coding"
"Mp2g14080.1","No alias","Marchantia polymorpha","protein factor PRPF31 of U4/U6 small nuclear ribonucleoprotein particle (snRNP)","protein_coding"
"Mp2g18670.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp2g18880.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp2g19530.1","No alias","Marchantia polymorpha","Transportin MOS14 OS=Arabidopsis thaliana (sp|q8gul2|mos14_arath : 147.0)","protein_coding"
"Mp2g19900.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp2g24910.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp2g26290.1","No alias","Marchantia polymorpha","component RPSa of SSU proteome","protein_coding"
"Mp3g00330.1","No alias","Marchantia polymorpha","BEACH domain-containing protein B OS=Arabidopsis thaliana (sp|f4i9t0|bchb_arath : 309.0)","protein_coding"
"Mp3g02880.1","No alias","Marchantia polymorpha","component SNL of histone deacetylase machineries","protein_coding"
"Mp3g03660.1","No alias","Marchantia polymorpha","PLP UV-A/blue light photoreceptor","protein_coding"
"Mp3g07610.1","No alias","Marchantia polymorpha","histone demethylase (PKDM9). transcription factor (JUMONJI)","protein_coding"
"Mp3g12200.1","No alias","Marchantia polymorpha","chlorophyllase (CLH)","protein_coding"
"Mp3g14610.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp3g16330.1","No alias","Marchantia polymorpha","class V/Su(var) histone methyltransferase component of histone lysine methylation/demethylation","protein_coding"
"Mp3g22510.1","No alias","Marchantia polymorpha","Thioredoxin-like protein CDSP32, chloroplastic OS=Oryza sativa subsp. japonica (sp|q84nn4|cdsp_orysj : 313.0)","protein_coding"
"Mp3g23130.1","No alias","Marchantia polymorpha","protease (Deg)","protein_coding"
"Mp4g00710.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp4g11370.1","No alias","Marchantia polymorpha","L-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Arabidopsis thaliana (sp|q9les4|l2hdh_arath : 411.0)","protein_coding"
"Mp4g12890.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp4g20040.1","No alias","Marchantia polymorpha","component FBL of CUL3-BTB E3 ubiquitin ligase complex","protein_coding"
"Mp4g23990.1","No alias","Marchantia polymorpha","component RPL10 of LSU proteome component","protein_coding"
"Mp5g00070.1","No alias","Marchantia polymorpha","Probable RNA helicase SDE3 OS=Arabidopsis thaliana (sp|q8gyd9|sde3_arath : 330.0)","protein_coding"
"Mp5g04390.1","No alias","Marchantia polymorpha","component RAD50 of MRE11-RAD50-NBS1 (MRN) complex. component RAD50 of DNA resection MRE11-RAD50-NBS1 (MRN) complex","protein_coding"
"Mp5g15120.1","No alias","Marchantia polymorpha","component RPS29 of SSU proteome","protein_coding"
"Mp5g23530.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp5g23940.1","No alias","Marchantia polymorpha","glutamate dehydrogenase","protein_coding"
"Mp6g01920.1","No alias","Marchantia polymorpha","cyclic nucleotide-gated cation channel (CNGC)","protein_coding"
"Mp6g04690.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp6g05720.1","No alias","Marchantia polymorpha","RNA degradation surveillance factor (SOP1)","protein_coding"
"Mp6g06480.1","No alias","Marchantia polymorpha","DNA polymerase eta (POLH)","protein_coding"
"Mp6g19210.1","No alias","Marchantia polymorpha","DEAD-box ATP-dependent RNA helicase 5 OS=Arabidopsis thaliana (sp|q9c551|rh5_arath : 604.0)","protein_coding"
"Mp7g01180.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp8g03210.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp8g03250.1","No alias","Marchantia polymorpha","component RPS14 of SSU proteome","protein_coding"
"Mp8g09170.1","No alias","Marchantia polymorpha","component SRm160 of RNA quality control Exon Junction complex","protein_coding"
"Mp8g14530.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp8g14540.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"MpVg00980.1","No alias","Marchantia polymorpha","No annotation","protein_coding"
"Potri.005G038100","No alias","Populus trichocarpa","glutathione synthetase 2","protein_coding"
"Potri.013G026800","No alias","Populus trichocarpa","glutathione synthetase 2","protein_coding"
"Pp1s108_187V6","No alias","Physcomitrella patens","lysyl-trna synthetase","protein_coding"
"Pp1s114_80V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s115_10V6","No alias","Physcomitrella patens","wrky transcription","protein_coding"
"Pp1s120_27V6","No alias","Physcomitrella patens","component of oligomeric golgi complex 8","protein_coding"
"Pp1s130_254V6","No alias","Physcomitrella patens","zinc finger protein","protein_coding"
"Pp1s131_21V6","No alias","Physcomitrella patens","MHF15.4; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s134_124V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s135_44V6","No alias","Physcomitrella patens","cytochrome p450","protein_coding"
"Pp1s136_37V6","No alias","Physcomitrella patens","transducin family protein wd-40 repeat family protein","protein_coding"
"Pp1s138_60V6","No alias","Physcomitrella patens","multiple stress-responsive zinc-finger protein","protein_coding"
"Pp1s13_33V6","No alias","Physcomitrella patens","endo beta n-","protein_coding"
"Pp1s146_35V6","No alias","Physcomitrella patens","26s proteasome non-atpase regulatory subunit 14","protein_coding"
"Pp1s14_213V6","No alias","Physcomitrella patens","arginine decarboxylase","protein_coding"
"Pp1s152_163V6","No alias","Physcomitrella patens","F14G24.13; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s154_146V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s154_63V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s162_107V6","No alias","Physcomitrella patens","F17A13.240; F-box family protein [Arabidopsis thaliana]","protein_coding"
"Pp1s162_167V6","No alias","Physcomitrella patens","F10M23.120; co-chaperone grpE family protein [KO:K03687] [Arabidopsis thaliana]","protein_coding"
"Pp1s167_21V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s177_28V6","No alias","Physcomitrella patens","soluble acid invertase","protein_coding"
"Pp1s178_19V6","No alias","Physcomitrella patens","af428304_1 at2g42780","protein_coding"
"Pp1s186_46V6","No alias","Physcomitrella patens","apoptosis antagonizing transcription factor","protein_coding"
"Pp1s196_28V6","No alias","Physcomitrella patens","trypsin domain-containing","protein_coding"
"Pp1s1_337V6","No alias","Physcomitrella patens","aig1-like protein","protein_coding"
"Pp1s1_405V6","No alias","Physcomitrella patens","F28O16.5; 12-oxophytodienoate reductase (OPR1) [Arabidopsis thaliana]","protein_coding"
"Pp1s223_52V6","No alias","Physcomitrella patens","histone deacetylase","protein_coding"
"Pp1s227_61V6","No alias","Physcomitrella patens","protein binding","protein_coding"
"Pp1s229_15V6","No alias","Physcomitrella patens","cazy family gt8","protein_coding"
"Pp1s22_254V6","No alias","Physcomitrella patens","rrna methyltransferase","protein_coding"
"Pp1s240_88V6","No alias","Physcomitrella patens","nuclear prelamin a recognition factor-like","protein_coding"
"Pp1s249_37V6","No alias","Physcomitrella patens","sucrose proton symporter","protein_coding"
"Pp1s255_23V6","No alias","Physcomitrella patens","phosphatidylglycerophosphate synthase 1","protein_coding"
"Pp1s257_26V6","No alias","Physcomitrella patens","F17A13.240; F-box family protein [Arabidopsis thaliana]","protein_coding"
"Pp1s257_38V6","No alias","Physcomitrella patens","T12C14.30; zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana]","protein_coding"
"Pp1s282_34V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s28_126V6","No alias","Physcomitrella patens","glutathione synthetase","protein_coding"
"Pp1s291_53V6","No alias","Physcomitrella patens","choline-phosphate cytidylyltransferase b","protein_coding"
"Pp1s307_71V6","No alias","Physcomitrella patens","actin-like protein arp5","protein_coding"
"Pp1s336_36V6","No alias","Physcomitrella patens","atp binding","protein_coding"
"Pp1s338_40V6","No alias","Physcomitrella patens","dna-directed rna polymerase i largest","protein_coding"
"Pp1s33_169V6","No alias","Physcomitrella patens","dynamin-related protein 1c","protein_coding"
"Pp1s33_361V6","No alias","Physcomitrella patens","MDC8.14; C2 domain-containing protein [Arabidopsis thaliana]","protein_coding"
"Pp1s34_56V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s358_57V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s37_19V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s38_148V6","No alias","Physcomitrella patens","rc protein","protein_coding"
"Pp1s3_199V6","No alias","Physcomitrella patens","glycosyl hydrolase family catalytic domain containing expressed","protein_coding"
"Pp1s3_459V6","No alias","Physcomitrella patens","proteasome subunit beta type 4 precursor","protein_coding"
"Pp1s404_1V6","No alias","Physcomitrella patens","microsomal glutathione s-","protein_coding"
"Pp1s42_44V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s444_27V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s46_64V6","No alias","Physcomitrella patens","dehydrogenase reductase sdr family member 12","protein_coding"
"Pp1s47_81V6","No alias","Physcomitrella patens","Protein C10orf58 precursor [Homo sapiens]","protein_coding"
"Pp1s53_23V6","No alias","Physcomitrella patens","serine threonine protein kinase","protein_coding"
"Pp1s545_8V6","No alias","Physcomitrella patens","eukaryotic initiation factor 5c cg2922- isoform f","protein_coding"
"Pp1s54_148V6","No alias","Physcomitrella patens","eukaryotic peptide chain release factor gtp-binding","protein_coding"
"Pp1s56_265V6","No alias","Physcomitrella patens","glutamate transporter","protein_coding"
"Pp1s58_172V6","No alias","Physcomitrella patens","uroporphyrin iii methylase","protein_coding"
"Pp1s58_98V6","No alias","Physcomitrella patens","K9I9.11; hypothetical protein [Arabidopsis thaliana]","protein_coding"
"Pp1s59_167V6","No alias","Physcomitrella patens","elongation factor 1-","protein_coding"
"Pp1s62_116V6","No alias","Physcomitrella patens","autophagy protein","protein_coding"
"Pp1s62_11V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s63_8V6","No alias","Physcomitrella patens","glutaredoxin","protein_coding"
"Pp1s65_136V6","No alias","Physcomitrella patens","eukaryotic translation initiation factor 3 delta subunit","protein_coding"
"Pp1s66_231V6","No alias","Physcomitrella patens","T10F5.19; GDP-mannose transporter (GONST1) [Arabidopsis thaliana]","protein_coding"
"Pp1s70_168V6","No alias","Physcomitrella patens","26s proteasome non-atpase regulatory subunit 6","protein_coding"
"Pp1s77_184V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s77_45V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s80_129V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s83_66V6","No alias","Physcomitrella patens","phytol kinase chloroplast","protein_coding"
"Pp1s91_142V6","No alias","Physcomitrella patens","guanine nucleotide binding protein 3","protein_coding"
"Pp1s95_65V6","No alias","Physcomitrella patens","methionine sulfoxide reductase type","protein_coding"
"Pp1s9_310V6","No alias","Physcomitrella patens","No description available","protein_coding"
"PSME_00000100-RA","No alias","Pseudotsuga menziesii","(at1g55090 : 257.0) carbon-nitrogen hydrolase family protein; FUNCTIONS IN: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, NAD+ synthase (glutamine-hydrolyzing) activity, ATP binding; INVOLVED IN: nitrogen compound metabolic process, NAD biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (InterPro:IPR003010), NAD synthase (InterPro:IPR003694), Glutamine-dependent NAD(+) synthetase, GAT domain-containing (InterPro:IPR014445), NAD/GMP synthase (InterPro:IPR022310); Has 5923 Blast hits to 5903 proteins in 2409 species: Archae - 233; Bacteria - 4478; Metazoa - 145; Fungi - 142; Plants - 70; Viruses - 0; Other Eukaryotes - 855 (source: NCBI BLink). & (reliability: 514.0) &  (original description: no original description)","protein_coding"
"PSME_00000126-RA","No alias","Pseudotsuga menziesii","(at2g14170 : 598.0) Arabidopsis thaliana methylmalonate-semialdehyde dehydrogenase; aldehyde dehydrogenase  6B2 (ALDH6B2); CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160), Methylmalonate-semialdehyde dehydrogenase (InterPro:IPR010061); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 2C4 (TAIR:AT3G24503.1); Has 57527 Blast hits to 57240 proteins in 2927 species: Archae - 475; Bacteria - 33264; Metazoa - 2506; Fungi - 2072; Plants - 1211; Viruses - 0; Other Eukaryotes - 17999 (source: NCBI BLink). & (o24174|badh_orysa : 167.0) Betaine-aldehyde dehydrogenase (EC 1.2.1.8) (BADH) - Oryza sativa (Rice) & (reliability: 1196.0) &  (original description: no original description)","protein_coding"
"PSME_00001888-RA","No alias","Pseudotsuga menziesii","(at3g17470 : 357.0) Ca2+-activated RelA/spot homolog (CRSH); FUNCTIONS IN: GTP diphosphokinase activity, calcium ion binding; INVOLVED IN: guanosine tetraphosphate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248), RelA/SpoT (InterPro:IPR007685); BEST Arabidopsis thaliana protein match is: RELA/SPOT homolog 3 (TAIR:AT1G54130.1); Has 14021 Blast hits to 13962 proteins in 3173 species: Archae - 6; Bacteria - 8120; Metazoa - 1259; Fungi - 992; Plants - 727; Viruses - 0; Other Eukaryotes - 2917 (source: NCBI BLink). & (reliability: 714.0) &  (original description: no original description)","protein_coding"
"PSME_00003831-RA","No alias","Pseudotsuga menziesii","(at2g39050 : 160.0) hydroxyproline-rich glycoprotein family protein; CONTAINS InterPro DOMAIN/s: Ricin B-related lectin (InterPro:IPR008997), Ricin B lectin (InterPro:IPR000772); Has 1708 Blast hits to 1449 proteins in 222 species: Archae - 0; Bacteria - 47; Metazoa - 514; Fungi - 386; Plants - 615; Viruses - 5; Other Eukaryotes - 141 (source: NCBI BLink). & (reliability: 320.0) &  (original description: no original description)","protein_coding"
"PSME_00003877-RA","No alias","Pseudotsuga menziesii","(o24301|sus2_pea : 1253.0) Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP glucosyltransferase 2) - Pisum sativum (Garden pea) & (at4g02280 : 1246.0) Encodes a protein with sucrose synthase activity (SUS3). It appears to be important for sucrose metabolism in developing seeds, especially during the late maturation phase, about 18 days after flowering.; sucrose synthase 3 (SUS3); CONTAINS InterPro DOMAIN/s: Sucrose synthase, plant/cyanobacteria (InterPro:IPR012820), Sucrose synthase (InterPro:IPR000368), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: sucrose synthase 2 (TAIR:AT5G49190.1); Has 6506 Blast hits to 6505 proteins in 1621 species: Archae - 256; Bacteria - 4351; Metazoa - 95; Fungi - 50; Plants - 824; Viruses - 0; Other Eukaryotes - 930 (source: NCBI BLink). & (reliability: 2492.0) &  (original description: no original description)","protein_coding"
"PSME_00003973-RA","No alias","Pseudotsuga menziesii","(at1g64550 : 455.0) member of GCN subfamily; general control non-repressible 3 (GCN3); FUNCTIONS IN: transporter activity; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC transporter family protein (TAIR:AT5G60790.1); Has 474431 Blast hits to 318649 proteins in 3825 species: Archae - 8686; Bacteria - 390426; Metazoa - 7720; Fungi - 5127; Plants - 4044; Viruses - 51; Other Eukaryotes - 58377 (source: NCBI BLink). & (reliability: 910.0) &  (original description: no original description)","protein_coding"
"PSME_00005069-RA","No alias","Pseudotsuga menziesii","(at3g25800 : 415.0) one of three genes encoding the protein phosphatase 2A regulatory subunit; protein phosphatase 2A  subunit A2 (PP2AA2); FUNCTIONS IN: protein phosphatase type 2A regulator activity; INVOLVED IN: response to cadmium ion, regulation of phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: protein phosphatase 2A  subunit A3 (TAIR:AT1G13320.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p36875|2aaa_pea : 89.7) Protein phosphatase PP2A regulatory subunit A (PR65) (Fragment) - Pisum sativum (Garden pea) & (reliability: 830.0) &  (original description: no original description)","protein_coding"
"PSME_00005486-RA","No alias","Pseudotsuga menziesii","(at3g46220 : 494.0) unknown protein; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2042 (InterPro:IPR018611). & (reliability: 988.0) &  (original description: no original description)","protein_coding"
"PSME_00007643-RA","No alias","Pseudotsuga menziesii","(at2g41790 : 182.0) Insulinase (Peptidase family M16) family protein; FUNCTIONS IN: metalloendopeptidase activity, zinc ion binding, catalytic activity, metal ion binding; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M16, zinc-binding site (InterPro:IPR001431), Peptidase M16, C-terminal (InterPro:IPR007863), Peptidase M16, N-terminal (InterPro:IPR011765), Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249), Peptidase M16, core (InterPro:IPR011237); BEST Arabidopsis thaliana protein match is: Insulinase (Peptidase family M16) family protein (TAIR:AT3G57470.2); Has 9660 Blast hits to 9541 proteins in 2186 species: Archae - 9; Bacteria - 6247; Metazoa - 831; Fungi - 633; Plants - 271; Viruses - 3; Other Eukaryotes - 1666 (source: NCBI BLink). & (reliability: 364.0) &  (original description: no original description)","protein_coding"
"PSME_00008721-RA","No alias","Pseudotsuga menziesii","(at2g14170 : 108.0) Arabidopsis thaliana methylmalonate-semialdehyde dehydrogenase; aldehyde dehydrogenase  6B2 (ALDH6B2); CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160), Methylmalonate-semialdehyde dehydrogenase (InterPro:IPR010061); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 2C4 (TAIR:AT3G24503.1); Has 57527 Blast hits to 57240 proteins in 2927 species: Archae - 475; Bacteria - 33264; Metazoa - 2506; Fungi - 2072; Plants - 1211; Viruses - 0; Other Eukaryotes - 17999 (source: NCBI BLink). & (reliability: 216.0) &  (original description: no original description)","protein_coding"
"PSME_00009526-RA","No alias","Pseudotsuga menziesii","(at1g20560 : 635.0) acyl activating enzyme 1 (AAE1); FUNCTIONS IN: AMP binding; INVOLVED IN: metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT2G17650.1); Has 73688 Blast hits to 67811 proteins in 3570 species: Archae - 1118; Bacteria - 49573; Metazoa - 3114; Fungi - 3286; Plants - 2213; Viruses - 1; Other Eukaryotes - 14383 (source: NCBI BLink). & (p14912|4cl1_petcr : 145.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Petroselinum crispum (Parsley) (Petroselinum hortense) & (reliability: 1270.0) &  (original description: no original description)","protein_coding"
"PSME_00009988-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00010402-RA","No alias","Pseudotsuga menziesii","(at5g42240 : 369.0) serine carboxypeptidase-like 42 (scpl42); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 41 (TAIR:AT5G42230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p52711|cbp23_horvu : 209.0) Serine carboxypeptidase II-3 precursor (EC 3.4.16.6) (CP-MII.3) [Contains: Serine carboxypeptidase II-3 chain A; Serine carboxypeptidase II-3 chain B] - Hordeum vulgare (Barley) & (reliability: 738.0) &  (original description: no original description)","protein_coding"
"PSME_00011722-RA","No alias","Pseudotsuga menziesii","(at1g12640 : 526.0) MBOAT (membrane bound O-acyl transferase) family protein; FUNCTIONS IN: acyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Membrane bound O-acyl transferase, MBOAT (InterPro:IPR004299); BEST Arabidopsis thaliana protein match is: MBOAT (membrane bound O-acyl transferase) family protein (TAIR:AT1G63050.1); Has 1204 Blast hits to 1199 proteins in 313 species: Archae - 0; Bacteria - 269; Metazoa - 625; Fungi - 142; Plants - 47; Viruses - 0; Other Eukaryotes - 121 (source: NCBI BLink). & (reliability: 1052.0) &  (original description: no original description)","protein_coding"
"PSME_00011781-RA","No alias","Pseudotsuga menziesii","(at1g76140 : 1110.0) Prolyl oligopeptidase family protein; FUNCTIONS IN: serine-type peptidase activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375), Peptidase S9A, oligopeptidase, N-terminal beta-propeller (InterPro:IPR004106), Peptidase S9A, prolyl oligopeptidase (InterPro:IPR002470); BEST Arabidopsis thaliana protein match is: Prolyl oligopeptidase family protein (TAIR:AT1G20380.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 2220.0) &  (original description: no original description)","protein_coding"
"PSME_00012421-RA","No alias","Pseudotsuga menziesii","(at3g08650 : 129.0) ZIP metal ion transporter family; FUNCTIONS IN: metal ion transmembrane transporter activity; INVOLVED IN: metal ion transport, transmembrane transport; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc/iron permease (InterPro:IPR003689); BEST Arabidopsis thaliana protein match is: ZIP metal ion transporter family (TAIR:AT3G20870.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 258.0) &  (original description: no original description)","protein_coding"
"PSME_00012446-RA","No alias","Pseudotsuga menziesii","(at3g57870 : 297.0) Encodes a SUMO liagse that directs the attachment of the small protein SUMO to target proteins via an isopeptide bond. This enzyme is localized to the nucleus and plants with reduced levels of this protein show higher sensitivity to ABA in root growth inhibition assays. It has high similarity to the yeast UBC9 SUMO ligase and is sometimes referred to by that name.; sumo conjugation enzyme 1 (SCE1); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquiting-conjugating enzyme 2 (TAIR:AT2G02760.1); Has 9584 Blast hits to 9566 proteins in 388 species: Archae - 0; Bacteria - 0; Metazoa - 4206; Fungi - 2037; Plants - 1834; Viruses - 20; Other Eukaryotes - 1487 (source: NCBI BLink). & (p35130|ubc2_medsa : 124.0) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Medicago sativa (Alfalfa) & (reliability: 594.0) &  (original description: no original description)","protein_coding"
"PSME_00013241-RA","No alias","Pseudotsuga menziesii","(at5g61580 : 469.0) phosphofructokinase 4 (PFK4); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 3 (TAIR:AT4G26270.1); Has 7879 Blast hits to 7460 proteins in 2153 species: Archae - 28; Bacteria - 5246; Metazoa - 634; Fungi - 293; Plants - 391; Viruses - 4; Other Eukaryotes - 1283 (source: NCBI BLink). & (reliability: 938.0) &  (original description: no original description)","protein_coding"
"PSME_00013274-RA","No alias","Pseudotsuga menziesii","(at5g27380 : 210.0) Encodes a protein with similarity to glutathione synthetases, which catalyzes one of the early steps in glutathione biosynthesis. Two transcripts have been detected; the longer transcript is less abundant and the protein is localized to the chloroplast. The smaller transcript, in which the transit peptide is truncated, is localized to the cytosol.; glutathione synthetase 2 (GSH2); FUNCTIONS IN: glutathione synthase activity; INVOLVED IN: response to jasmonic acid stimulus, N-terminal protein myristoylation, glutathione biosynthetic process; LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PreATP-grasp-like fold (InterPro:IPR016185), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Glutathione synthase, eukaryotic (InterPro:IPR005615), Glutathione synthase, substrate-binding, eukaryotic (InterPro:IPR004887), Glutathione synthase, alpha-helical, eukaryotic (InterPro:IPR014042); Has 644 Blast hits to 607 proteins in 239 species: Archae - 0; Bacteria - 51; Metazoa - 212; Fungi - 156; Plants - 112; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (o23732|gshb_braju : 209.0) Glutathione synthetase, chloroplast precursor (EC 6.3.2.3) (Glutathione synthase) (GSH synthetase) (GSH-S) - Brassica juncea (Leaf mustard) (Indian mustard) & (reliability: 420.0) &  (original description: no original description)","protein_coding"
"PSME_00013276-RA","No alias","Pseudotsuga menziesii","(at5g27380 : 360.0) Encodes a protein with similarity to glutathione synthetases, which catalyzes one of the early steps in glutathione biosynthesis. Two transcripts have been detected; the longer transcript is less abundant and the protein is localized to the chloroplast. The smaller transcript, in which the transit peptide is truncated, is localized to the cytosol.; glutathione synthetase 2 (GSH2); FUNCTIONS IN: glutathione synthase activity; INVOLVED IN: response to jasmonic acid stimulus, N-terminal protein myristoylation, glutathione biosynthetic process; LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PreATP-grasp-like fold (InterPro:IPR016185), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Glutathione synthase, eukaryotic (InterPro:IPR005615), Glutathione synthase, substrate-binding, eukaryotic (InterPro:IPR004887), Glutathione synthase, alpha-helical, eukaryotic (InterPro:IPR014042); Has 644 Blast hits to 607 proteins in 239 species: Archae - 0; Bacteria - 51; Metazoa - 212; Fungi - 156; Plants - 112; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (o23732|gshb_braju : 359.0) Glutathione synthetase, chloroplast precursor (EC 6.3.2.3) (Glutathione synthase) (GSH synthetase) (GSH-S) - Brassica juncea (Leaf mustard) (Indian mustard) & (reliability: 720.0) &  (original description: no original description)","protein_coding"
"PSME_00016282-RA","No alias","Pseudotsuga menziesii","(at4g22670 : 236.0) HSP70-interacting protein 1 (HIP1); FUNCTIONS IN: binding; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: tetraticopeptide domain-containing thioredoxin (TAIR:AT3G17880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 456.0) &  (original description: no original description)","protein_coding"
"PSME_00016532-RA","No alias","Pseudotsuga menziesii","(at5g50400 : 325.0) purple acid phosphatase 27 (PAP27); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 24 (TAIR:AT4G24890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q687e1|npp_horvu : 311.0) Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-) (Fragments) - Hordeum vulgare (Barley) & (reliability: 650.0) &  (original description: no original description)","protein_coding"
"PSME_00018022-RA","No alias","Pseudotsuga menziesii","(at4g33350 : 82.8) Tic22-like family protein; LOCATED IN: chloroplast inner membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chloroplast protein import component Tic22 (InterPro:IPR005692), Tic22-like (InterPro:IPR007378); BEST Arabidopsis thaliana protein match is: Tic22-like family protein (TAIR:AT3G23710.1). & (reliability: 165.6) &  (original description: no original description)","protein_coding"
"PSME_00020440-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00020679-RA","No alias","Pseudotsuga menziesii","(at5g26710 : 976.0) Glutamyl/glutaminyl-tRNA synthetase, class Ic; FUNCTIONS IN: glutamate-tRNA ligase activity; INVOLVED IN: glutamyl-tRNA aminoacylation, translation, tRNA aminoacylation, tRNA aminoacylation for protein translation; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Glutamyl/glutaminyl-tRNA synthetase, class Ic, alpha-bundle domain (InterPro:IPR020061), Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain (InterPro:IPR020056), Glutamyl/glutaminyl-tRNA synthetase, class Ic, N-terminal (InterPro:IPR020060), Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain (InterPro:IPR011035), Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain (InterPro:IPR020058), Glutamyl/glutaminyl-tRNA synthetase, class Ic (InterPro:IPR000924), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutamyl-tRNA synthetase, class Ic, archaeal/eukaryotic cytosolic (InterPro:IPR004526), Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain (InterPro:IPR020059); BEST Arabidopsis thaliana protein match is: glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS, putative (TAIR:AT1G25350.1); Has 14411 Blast hits to 14402 proteins in 2977 species: Archae - 262; Bacteria - 9488; Metazoa - 657; Fungi - 449; Plants - 238; Viruses - 0; Other Eukaryotes - 3317 (source: NCBI BLink). & (p52780|syq_luplu : 259.0) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glutamine--tRNA ligase) (GlnRS) - Lupinus luteus (European yellow lupin) & (reliability: 1952.0) &  (original description: no original description)","protein_coding"
"PSME_00023828-RA","No alias","Pseudotsuga menziesii","(at5g61540 : 184.0) N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein; FUNCTIONS IN: asparaginase activity, hydrolase activity; INVOLVED IN: glycoprotein catabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase T2, asparaginase 2 (InterPro:IPR000246); BEST Arabidopsis thaliana protein match is: N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein (TAIR:AT3G16150.1); Has 2748 Blast hits to 2738 proteins in 812 species: Archae - 113; Bacteria - 1407; Metazoa - 453; Fungi - 78; Plants - 148; Viruses - 0; Other Eukaryotes - 549 (source: NCBI BLink). & (reliability: 368.0) &  (original description: no original description)","protein_coding"
"PSME_00024887-RA","No alias","Pseudotsuga menziesii","(at1g74600 : 602.0) pentatricopeptide (PPR) repeat-containing protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G13650.1); Has 58662 Blast hits to 14057 proteins in 256 species: Archae - 2; Bacteria - 61; Metazoa - 165; Fungi - 118; Plants - 57459; Viruses - 0; Other Eukaryotes - 857 (source: NCBI BLink). & (q76c99|rf1_orysa : 146.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1204.0) &  (original description: no original description)","protein_coding"
"PSME_00025197-RA","No alias","Pseudotsuga menziesii","(at2g46930 : 463.0) Pectinacetylesterase family protein; FUNCTIONS IN: carboxylesterase activity; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT3G62060.1); Has 557 Blast hits to 549 proteins in 96 species: Archae - 0; Bacteria - 48; Metazoa - 118; Fungi - 0; Plants - 302; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink). & (reliability: 926.0) &  (original description: no original description)","protein_coding"
"PSME_00026162-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00028592-RA","No alias","Pseudotsuga menziesii","(at1g12220 : 233.0) Resistance gene, mediates resistance against the bacterial pathogen Pseudomonas syringae. Contains a putative nucleotide binding site composed of kinase-1a (or P-loop), kinase-2a, and putative kinase-3a domains, 13 imperfect leucine-rich repeats, a potential leucine zipper, and two uncharacterized motifs that are well conserved in products of previously isolated R genes. Confers resistance to Pseudomonas syringae strains that express avrPphB.; RESISTANT TO P. SYRINGAE 5 (RPS5); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing protein (InterPro:IPR015766), NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT1G12280.1). & (reliability: 466.0) &  (original description: no original description)","protein_coding"
"PSME_00029478-RA","No alias","Pseudotsuga menziesii","(at1g58340 : 142.0) ZF14; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: response to nematode; LOCATED IN: membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT4G29140.1); Has 10543 Blast hits to 10463 proteins in 2002 species: Archae - 229; Bacteria - 7598; Metazoa - 148; Fungi - 324; Plants - 1321; Viruses - 0; Other Eukaryotes - 923 (source: NCBI BLink). & (reliability: 264.0) &  (original description: no original description)","protein_coding"
"PSME_00029786-RA","No alias","Pseudotsuga menziesii","(at1g69830 : 387.0) Encodes a plastid-localized α-amylase. Expression is reduced in the SEX4 mutant. Loss of function mutations show normal diurnal pattern of starch accumulation/degradation.  Expression follows circadian rhythms.; alpha-amylase-like 3 (AMY3); FUNCTIONS IN: alpha-amylase activity; INVOLVED IN: circadian rhythm, starch catabolic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047), Alpha-amylase, C-terminal beta-sheet (InterPro:IPR012850); BEST Arabidopsis thaliana protein match is: alpha-amylase-like 2 (TAIR:AT1G76130.1); Has 11240 Blast hits to 11194 proteins in 2094 species: Archae - 95; Bacteria - 8555; Metazoa - 677; Fungi - 729; Plants - 646; Viruses - 0; Other Eukaryotes - 538 (source: NCBI BLink). & (p27934|amy3e_orysa : 167.0) Alpha-amylase isozyme 3E precursor (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase) - Oryza sativa (Rice) & (reliability: 774.0) &  (original description: no original description)","protein_coding"
"PSME_00030405-RA","No alias","Pseudotsuga menziesii","(p42045|hemh_horvu : 390.0) Ferrochelatase-2, chloroplast precursor (EC 4.99.1.1) (Ferrochelatase II) (Protoheme ferro-lyase 2) (Heme synthetase 2) - Hordeum vulgare (Barley) & (at5g26030 : 313.0) encodes ferrochelatase I located in plastids. Involved in heme biosynthesis in non-photosynthetic tissues and induced by oxidative stress in photosynthetic tissues to supply heme for defensive hemoproteins; ferrochelatase 1 (FC1); FUNCTIONS IN: ferrochelatase activity; INVOLVED IN: response to oxidative stress, heme biosynthetic process, tetrapyrrole biosynthetic process; LOCATED IN: mitochondrion, chloroplast, plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ferrochelatase, active site (InterPro:IPR019772), Ferrochelatase (InterPro:IPR001015); BEST Arabidopsis thaliana protein match is: ferrochelatase 2 (TAIR:AT2G30390.1); Has 7391 Blast hits to 7389 proteins in 2072 species: Archae - 19; Bacteria - 4136; Metazoa - 176; Fungi - 140; Plants - 115; Viruses - 0; Other Eukaryotes - 2805 (source: NCBI BLink). & (reliability: 626.0) &  (original description: no original description)","protein_coding"
"PSME_00030881-RA","No alias","Pseudotsuga menziesii","(at1g04850 : 130.0) ubiquitin-associated (UBA)/TS-N domain-containing protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), PUB domain (InterPro:IPR018997), PUG domain (InterPro:IPR006567), Zinc finger, C2H2-type (InterPro:IPR007087), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G48690.1); Has 9425 Blast hits to 9403 proteins in 278 species: Archae - 0; Bacteria - 0; Metazoa - 2591; Fungi - 765; Plants - 4746; Viruses - 72; Other Eukaryotes - 1251 (source: NCBI BLink). & (reliability: 260.0) &  (original description: no original description)","protein_coding"
"PSME_00031646-RA","No alias","Pseudotsuga menziesii","(at2g02370 : 226.0) SNARE associated Golgi protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: SNARE associated Golgi protein family (TAIR:AT1G12450.1); Has 2420 Blast hits to 2420 proteins in 703 species: Archae - 6; Bacteria - 1288; Metazoa - 120; Fungi - 130; Plants - 226; Viruses - 0; Other Eukaryotes - 650 (source: NCBI BLink). & (reliability: 452.0) &  (original description: no original description)","protein_coding"
"PSME_00032878-RA","No alias","Pseudotsuga menziesii","(p49249|in22_maize : 214.0) IN2-2 protein - Zea mays (Maize) & (at1g60710 : 210.0) Encodes ATB2.; ATB2; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G60730.1); Has 30719 Blast hits to 30695 proteins in 2595 species: Archae - 650; Bacteria - 20319; Metazoa - 1822; Fungi - 2308; Plants - 1286; Viruses - 0; Other Eukaryotes - 4334 (source: NCBI BLink). & (reliability: 420.0) &  (original description: no original description)","protein_coding"
"PSME_00033260-RA","No alias","Pseudotsuga menziesii","(o50044|kdsa_pea : 156.0) 2-dehydro-3-deoxyphosphooctonate aldolase (EC 2.5.1.55) (Phospho-2-dehydro-3-deoxyoctonate aldolase) (3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase) (KDO-8-phosphate synthetase) (KDO 8-P synthase) (KDOPS) - Pisum sativum (Garden & (at3g02280 : 154.0) Flavodoxin family protein; FUNCTIONS IN: oxidoreductase activity, FMN binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), FAD-binding, type 1 (InterPro:IPR003097), Flavodoxin/nitric oxide synthase (InterPro:IPR008254), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709); BEST Arabidopsis thaliana protein match is: P450 reductase 1 (TAIR:AT4G24520.1); Has 7053 Blast hits to 6598 proteins in 1587 species: Archae - 9; Bacteria - 3832; Metazoa - 1042; Fungi - 865; Plants - 492; Viruses - 0; Other Eukaryotes - 813 (source: NCBI BLink). & (reliability: 306.0) &  (original description: no original description)","protein_coding"
"PSME_00033902-RA","No alias","Pseudotsuga menziesii","(at3g09570 : 137.0) Lung seven transmembrane receptor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: Lung seven transmembrane receptor family protein (TAIR:AT5G18520.1); Has 534 Blast hits to 530 proteins in 110 species: Archae - 0; Bacteria - 2; Metazoa - 259; Fungi - 16; Plants - 218; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (reliability: 250.0) &  (original description: no original description)","protein_coding"
"PSME_00034011-RA","No alias","Pseudotsuga menziesii","(at1g61010 : 528.0) cleavage and polyadenylation specificity factor 73-I (CPSF73-I); CONTAINS InterPro DOMAIN/s: Beta-Casp domain (InterPro:IPR022712), RNA-metabolising metallo-beta-lactamase (InterPro:IPR011108), Beta-lactamase-like (InterPro:IPR001279), Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term (InterPro:IPR021718); BEST Arabidopsis thaliana protein match is: cleavage and polyadenylation specificity factor 73 kDa subunit-II (TAIR:AT2G01730.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1056.0) &  (original description: no original description)","protein_coding"
"PSME_00035705-RA","No alias","Pseudotsuga menziesii","(at2g37500 : 229.0) arginine biosynthesis protein ArgJ family; FUNCTIONS IN: glutamate N-acetyltransferase activity; INVOLVED IN: arginine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Arginine biosynthesis protein ArgJ (InterPro:IPR002813), Peptidase S58 DmpA/arginine biosynthesis protein ArgJ (InterPro:IPR016117); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 458.0) &  (original description: no original description)","protein_coding"
"PSME_00036730-RA","No alias","Pseudotsuga menziesii","(at5g18170 : 733.0) Encodes the 43 kDa alpha-subunit of the glutamate dehydrogenase with a putative mitochondrial transit polypeptide and NAD(H)- and alpha-ketoglutarate-binding domains. Mitochondrial localization confirmed by subcellular fractionation. Combines in several ratios with GDH2 protein (GDH-beta) to form seven isoenzymes. Catalyzes the cleavage of glycine residues. May be involved in ammonia assimilation under conditions of inorganic nitrogen excess. The enzyme is almost exclusively found in the mitochondria of stem and leaf companion cells.; glutamate dehydrogenase 1 (GDH1); FUNCTIONS IN: in 6 functions; INVOLVED IN: response to cadmium ion, response to salt stress, nitrogen compound metabolic process, response to absence of light; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamate/phenylalanine/leucine/valine dehydrogenase (InterPro:IPR006095), Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal (InterPro:IPR006096), NAD(P)-binding domain (InterPro:IPR016040), Glutamate dehydrogenase (InterPro:IPR014362), Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain (InterPro:IPR006097); BEST Arabidopsis thaliana protein match is: glutamate dehydrogenase 3 (TAIR:AT3G03910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q9lec8|dheb_nicpl : 723.0) Glutamate dehydrogenase B (EC 1.4.1.3) (GDH B) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 1466.0) &  (original description: no original description)","protein_coding"
"PSME_00036768-RA","No alias","Pseudotsuga menziesii","(at2g39220 : 385.0) PATATIN-like protein 6 (PLP6); FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: metabolic process, lipid metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: patatin-like protein 6 (TAIR:AT3G54950.1); Has 1294 Blast hits to 1292 proteins in 232 species: Archae - 0; Bacteria - 327; Metazoa - 139; Fungi - 43; Plants - 635; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). & (p15478|pat5_soltu : 128.0) Patatin T5 precursor (Potato tuber protein) - Solanum tuberosum (Potato) & (reliability: 770.0) &  (original description: no original description)","protein_coding"
"PSME_00039115-RA","No alias","Pseudotsuga menziesii","(at2g33680 : 572.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT2G13600.1); Has 49646 Blast hits to 13771 proteins in 238 species: Archae - 0; Bacteria - 6; Metazoa - 50; Fungi - 74; Plants - 48928; Viruses - 0; Other Eukaryotes - 588 (source: NCBI BLink). & (q76c99|rf1_orysa : 125.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1144.0) &  (original description: no original description)","protein_coding"
"PSME_00041061-RA","No alias","Pseudotsuga menziesii","(at5g07050 : 338.0) nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT2G40900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 676.0) &  (original description: no original description)","protein_coding"
"PSME_00045282-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00047755-RA","No alias","Pseudotsuga menziesii","(at2g37990 : 190.0) ribosome biogenesis regulatory protein (RRS1) family protein; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal biogenesis regulatory protein (InterPro:IPR007023); Has 425 Blast hits to 423 proteins in 207 species: Archae - 1; Bacteria - 2; Metazoa - 151; Fungi - 137; Plants - 58; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (reliability: 380.0) &  (original description: no original description)","protein_coding"
"PSME_00047879-RA","No alias","Pseudotsuga menziesii","(at1g15060 : 330.0) Uncharacterised conserved protein UCP031088, alpha/beta hydrolase; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP031088, alpha/beta hydrolase, At1g15070 (InterPro:IPR016969), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein UCP031088, alpha/beta hydrolase (TAIR:AT1G73750.1); Has 177 Blast hits to 156 proteins in 44 species: Archae - 2; Bacteria - 72; Metazoa - 2; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 660.0) &  (original description: no original description)","protein_coding"
"PSME_00048866-RA","No alias","Pseudotsuga menziesii","(at4g38220 : 560.0) Peptidase M20/M25/M40 family protein; FUNCTIONS IN: hydrolase activity, metallopeptidase activity, aminoacylase activity; INVOLVED IN: response to zinc ion; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ArgE/DapE/ACY1/CPG2/YscS, conserved site (InterPro:IPR001261), Peptidase M20 (InterPro:IPR002933), N-acyl-L-amino-acid amidohydrolase (InterPro:IPR010159), Peptidase M20, dimerisation (InterPro:IPR011650); BEST Arabidopsis thaliana protein match is: Peptidase M20/M25/M40 family protein (TAIR:AT1G44820.1); Has 7219 Blast hits to 7215 proteins in 1775 species: Archae - 179; Bacteria - 5225; Metazoa - 384; Fungi - 290; Plants - 80; Viruses - 2; Other Eukaryotes - 1059 (source: NCBI BLink). & (reliability: 1032.0) &  (original description: no original description)","protein_coding"
"PSME_00048919-RA","No alias","Pseudotsuga menziesii","(at1g61010 : 672.0) cleavage and polyadenylation specificity factor 73-I (CPSF73-I); CONTAINS InterPro DOMAIN/s: Beta-Casp domain (InterPro:IPR022712), RNA-metabolising metallo-beta-lactamase (InterPro:IPR011108), Beta-lactamase-like (InterPro:IPR001279), Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term (InterPro:IPR021718); BEST Arabidopsis thaliana protein match is: cleavage and polyadenylation specificity factor 73 kDa subunit-II (TAIR:AT2G01730.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q652p4|cpsf2_orysa : 110.0) Cleavage and polyadenylation specificity factor 100 kDa subunit (CPSF 100 kDa subunit) - Oryza sativa (Rice) & (reliability: 1344.0) &  (original description: no original description)","protein_coding"
"PSME_00049027-RA","No alias","Pseudotsuga menziesii","(at1g67900 : 575.0) Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ fold (InterPro:IPR011333); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT3G26490.1). & (q5ks50|nph3_orysa : 414.0) Coleoptile phototropism protein 1 (Non-phototropic hypocotyl 3-like protein) (NPH3-like protein) - Oryza sativa (Rice) & (reliability: 1150.0) &  (original description: no original description)","protein_coding"
"PSME_00051005-RA","No alias","Pseudotsuga menziesii","(at3g01980 : 125.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G55290.2); Has 52487 Blast hits to 52467 proteins in 3078 species: Archae - 436; Bacteria - 38325; Metazoa - 1234; Fungi - 2083; Plants - 1279; Viruses - 0; Other Eukaryotes - 9130 (source: NCBI BLink). & (reliability: 250.0) &  (original description: no original description)","protein_coding"
"PSME_00051289-RA","No alias","Pseudotsuga menziesii","(at2g26870 : 699.0) non-specific phospholipase C2 (NPC2); FUNCTIONS IN: hydrolase activity, acting on ester bonds; INVOLVED IN: triglyceride biosynthetic process, phospholipid biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoesterase (InterPro:IPR007312); BEST Arabidopsis thaliana protein match is: non-specific phospholipase C1 (TAIR:AT1G07230.1); Has 2169 Blast hits to 2123 proteins in 400 species: Archae - 32; Bacteria - 1806; Metazoa - 0; Fungi - 127; Plants - 155; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). & (reliability: 1398.0) &  (original description: no original description)","protein_coding"
"PSME_00051470-RA","No alias","Pseudotsuga menziesii","(at1g79870 : 193.0) D-isomer specific 2-hydroxyacid dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-isomer specific 2-hydroxyacid dehydrogenase family protein (TAIR:AT1G12550.1). & (reliability: 386.0) &  (original description: no original description)","protein_coding"
"PSME_00052028-RA","No alias","Pseudotsuga menziesii","(q43270|plda1_maize : 1102.0) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) - Zea mays (Maize) & (at3g15730 : 1035.0) Encodes phospholipase D alpha 1 (PLD alpha 1). Positive regulator of abscisic acid (ABA) mediated stomatal movements.  PLD alpha 1 plays an important role in seed deterioration and aging in Arabidopsis.; phospholipase D alpha 1 (PLDALPHA1); FUNCTIONS IN: phospholipase D activity, phosphatidylinositol-4,5-bisphosphate binding; INVOLVED IN: response to cadmium ion, fatty acid metabolic process, seed germination, regulation of stomatal movement, positive regulation of abscisic acid mediated signaling pathway; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase D (InterPro:IPR015679), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008), Phospholipase D, plant (InterPro:IPR011402); BEST Arabidopsis thaliana protein match is: phospholipase D alpha 2 (TAIR:AT1G52570.1); Has 2073 Blast hits to 1588 proteins in 412 species: Archae - 0; Bacteria - 593; Metazoa - 344; Fungi - 417; Plants - 575; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). & (reliability: 2070.0) &  (original description: no original description)","protein_coding"
"PSME_00052364-RA","No alias","Pseudotsuga menziesii","(at1g15060 : 146.0) Uncharacterised conserved protein UCP031088, alpha/beta hydrolase; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP031088, alpha/beta hydrolase, At1g15070 (InterPro:IPR016969), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein UCP031088, alpha/beta hydrolase (TAIR:AT1G73750.1); Has 177 Blast hits to 156 proteins in 44 species: Archae - 2; Bacteria - 72; Metazoa - 2; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (reliability: 292.0) &  (original description: no original description)","protein_coding"
"PSME_00053774-RA","No alias","Pseudotsuga menziesii","(at3g61880 : 567.0) Encodes a cytochrome p450 monooxygenase.  Overexpression of this gene allows fruit growth independently of fertilization.  The gene is normally expressed only in floral organs(during the Arabidopsis stage 14 flower) and in the funiculus at anthesis.; cytochrome p450 78a9 (CYP78A9); FUNCTIONS IN: monooxygenase activity, oxygen binding; INVOLVED IN: fruit development; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, flower development stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 78, subfamily A, polypeptide 6 (TAIR:AT2G46660.1). & (o48927|c78a3_soybn : 538.0) Cytochrome P450 78A3 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 1134.0) &  (original description: no original description)","protein_coding"
"PSME_00054430-RA","No alias","Pseudotsuga menziesii","(at3g25250 : 289.0) Arabidopsis protein kinase; AGC2-1; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root, stamen, pollen tube; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), AGC-kinase, C-terminal (InterPro:IPR000961), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein (TAIR:AT4G13000.1); Has 87313 Blast hits to 84259 proteins in 2947 species: Archae - 68; Bacteria - 13079; Metazoa - 33183; Fungi - 11494; Plants - 12113; Viruses - 235; Other Eukaryotes - 17141 (source: NCBI BLink). & (p15792|kpk1_phavu : 233.0) Protein kinase PVPK-1 (EC 2.7.11.1) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 578.0) &  (original description: no original description)","protein_coding"
"PSME_00056584-RA","No alias","Pseudotsuga menziesii","(q8lq36|atx3_orysa : 210.0) Putative ataxin-3 homolog (EC 3.4.22.-) - Oryza sativa (Rice) & (at3g54130 : 209.0) Josephin family protein; CONTAINS InterPro DOMAIN/s: Machado-Joseph disease protein MJD (InterPro:IPR006155); BEST Arabidopsis thaliana protein match is: JOSEPHIN-like protein (TAIR:AT2G29640.1); Has 590 Blast hits to 584 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 441; Fungi - 14; Plants - 76; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). & (reliability: 418.0) &  (original description: no original description)","protein_coding"
"Seita.1G025100.1","No alias","Setaria italica ","Nodulin-26-like intrinsic protein *(NIP)","protein_coding"
"Seita.1G113000.1","No alias","Setaria italica ","ligand-gated cation channel *(GLR)","protein_coding"
"Seita.1G167200.1","No alias","Setaria italica ","EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen & delta-9 stearoyl-ACP desaturase *(AAD)","protein_coding"
"Seita.1G222400.1","No alias","Setaria italica ","CDKG protein kinase & catalytic component *(CDKG) of cyclin-dependent kinase complex & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.1G246000.1","No alias","Setaria italica ","LRR-XII protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.1G267100.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G319000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G341400.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G018000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G240500.1","No alias","Setaria italica ","subfamily ABCG transporter","protein_coding"
"Seita.2G364500.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G414800.1","No alias","Setaria italica ","substrate adaptor *(BPM) of CUL3-BTB E3 ubiquitin ligase complex","protein_coding"
"Seita.2G436000.1","No alias","Setaria italica ","NAC-type transcription factor","protein_coding"
"Seita.2G436300.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G038500.1","No alias","Setaria italica ","class phi glutathione S-transferase","protein_coding"
"Seita.3G049600.1","No alias","Setaria italica ","regulatory factor *(TZF) of mRNA stress granule formation","protein_coding"
"Seita.3G062000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G071200.1","No alias","Setaria italica ","pathogen polygalacturonase inhibitor *(PGIP)","protein_coding"
"Seita.3G077100.1","No alias","Setaria italica ","EC_2.4 glycosyltransferase","protein_coding"
"Seita.3G087100.1","No alias","Setaria italica ","transcriptional repressor *(AITR)","protein_coding"
"Seita.3G120000.1","No alias","Setaria italica ","AS2/LOB-type transcription factor","protein_coding"
"Seita.3G313700.1","No alias","Setaria italica ","ent-kaurene synthase & EC_4.2 carbon-oxygen lyase & mono-/sesquiterpene-/diterpene synthase","protein_coding"
"Seita.3G315100.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G337300.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G348900.1","No alias","Setaria italica ","glutathione synthetase *(GS) & EC_6.3 ligase forming carbon-nitrogen bond","protein_coding"
"Seita.3G368000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G396700.1","No alias","Setaria italica ","LRR-XII protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.4G042000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.4G063600.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.4G072300.1","No alias","Setaria italica ","ATP-dependent phosphofructokinase","protein_coding"
"Seita.4G078300.1","No alias","Setaria italica ","EC_1.3 oxidoreductase acting on CH-CH group of donor","protein_coding"
"Seita.4G242300.1","No alias","Setaria italica ","P1B-type heavy metal cation-transporting ATPase *(HMA)","protein_coding"
"Seita.4G290200.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G116300.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G135900.1","No alias","Setaria italica ","MYB-RELATED transcription factor *(MYB-R-R)","protein_coding"
"Seita.5G145900.1","No alias","Setaria italica ","SnRK3 SNF1-related protein kinase & CBL-dependent protein kinase *(CIPK) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.5G206700.1","No alias","Setaria italica ","solute transporter *(MTCC)","protein_coding"
"Seita.5G215800.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G224500.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G241100.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G248300.1","No alias","Setaria italica ","class-III histone methyltransferase *(Trx) & N-methyltransferase component *(ATX3/4/5) of COMPASS histone trimethylation complex","protein_coding"
"Seita.5G261400.1","No alias","Setaria italica ","subcluster B phosphatase & group-III RNA polymerase-II phosphatase","protein_coding"
"Seita.5G285500.1","No alias","Setaria italica ","phosphoinositide transfer protein *(SFH)","protein_coding"
"Seita.5G330700.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G379400.1","No alias","Setaria italica ","clade A phosphatase","protein_coding"
"Seita.5G385700.1","No alias","Setaria italica ","EC_2.3 acyltransferase","protein_coding"
"Seita.5G388900.1","No alias","Setaria italica ","beta-1,6-galactosyltransferase *(GALT29)","protein_coding"
"Seita.5G404800.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G415900.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G423600.1","No alias","Setaria italica ","regulatory RNA helicase *(RH20/RH30) of virus replication","protein_coding"
"Seita.5G438100.1","No alias","Setaria italica ","ARF-type transcription factor","protein_coding"
"Seita.5G439400.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.6G032700.1","No alias","Setaria italica ","NAC-type transcription factor","protein_coding"
"Seita.6G099000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.6G164000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.6G181000.1","No alias","Setaria italica ","phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase","protein_coding"
"Seita.6G229300.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.7G043600.1","No alias","Setaria italica ","subfamily ABCC transporter","protein_coding"
"Seita.7G115900.1","No alias","Setaria italica ","A1-class (Pepsin) protease & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding"
"Seita.7G124900.1","No alias","Setaria italica ","NAC-type transcription factor","protein_coding"
"Seita.7G181300.1","No alias","Setaria italica ","vacuolar acid beta-fructofuranosidase *(VIN) & EC_3.2 glycosylase","protein_coding"
"Seita.7G183500.1","No alias","Setaria italica ","Qc-type SYP5-group component of SNARE membrane fusion complex","protein_coding"
"Seita.7G194000.1","No alias","Setaria italica ","P1B-type heavy metal cation-transporting ATPase *(HMA)","protein_coding"
"Seita.7G203600.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.7G205800.1","No alias","Setaria italica ","phosphate transporter *(PHT5)","protein_coding"
"Seita.7G257600.1","No alias","Setaria italica ","EC_2.7 transferase transferring phosphorus-containing group & shikimate kinase","protein_coding"
"Seita.7G325000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.8G008100.1","No alias","Setaria italica ","NAC-type transcription factor","protein_coding"
"Seita.8G107500.1","No alias","Setaria italica ","solute transporter *(AAAP)","protein_coding"
"Seita.8G123800.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.8G138800.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.8G150700.1","No alias","Setaria italica ","tyrosine aminotransferase *(TAT) & EC_2.6 transferase transferring nitrogenous group","protein_coding"
"Seita.8G155600.1","No alias","Setaria italica ","EC_4.2 carbon-oxygen lyase & mono-/sesquiterpene-/diterpene synthase","protein_coding"
"Seita.8G164400.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.8G192000.1","No alias","Setaria italica ","EC_4.2 carbon-oxygen lyase & mono-/sesquiterpene-/diterpene synthase","protein_coding"
"Seita.8G200400.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.8G202700.1","No alias","Setaria italica ","WAK/WAKL protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.8G203700.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.8G204800.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.8G213300.1","No alias","Setaria italica ","glutathione synthetase *(GS) & EC_6.3 ligase forming carbon-nitrogen bond","protein_coding"
"Seita.8G247900.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.8G249300.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.8G249900.1","No alias","Setaria italica ","protease *(RBL)","protein_coding"
"Seita.9G120700.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G120800.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G187400.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G200600.1","No alias","Setaria italica ","mitochondrial NAD-dependent malic enzyme & EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding"
"Seita.9G259200.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G302400.1","No alias","Setaria italica ","cationic amino acid transporter *(CAT)","protein_coding"
"Seita.9G331700.1","No alias","Setaria italica ","EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.9G338100.1","No alias","Setaria italica ","metal chelator transporter *(TCR) & metal chelator nicotianamine transporter *(TCR)","protein_coding"
"Seita.9G373600.1","No alias","Setaria italica ","LRR-V protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.9G417600.1","No alias","Setaria italica ","NAC-type transcription factor","protein_coding"
"Sobic.001G010400.1","No alias","Sorghum bicolor ","recombination mediator *(RAD52)","protein_coding"
"Sobic.001G091300.3","No alias","Sorghum bicolor ","associated plant-specific component *(PAWH) of E3 ubiquitin ligase complex","protein_coding"
"Sobic.001G201500.1","No alias","Sorghum bicolor ","DDX6-type mRNA helicase *(RH12/RH8)","protein_coding"
"Sobic.001G223200.1","No alias","Sorghum bicolor ","anion transporter *(NRT1/PTR)","protein_coding"
"Sobic.001G233700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G243300.2","No alias","Sorghum bicolor ","chlorophyllase *(CLH) & EC_3.1 hydrolase acting on ester bond","protein_coding"
"Sobic.001G318500.1","No alias","Sorghum bicolor ","class tau glutathione S-transferase","protein_coding"
"Sobic.001G325200.1","No alias","Sorghum bicolor ","xanthine dehydrogenase *(XDH) & xanthine dehydrogenase & EC_1.17 oxidoreductase acting on CH or CH2 group & EC_1.2 oxidoreductase acting on aldehyde or oxo group of donor","protein_coding"
"Sobic.001G383100.1","No alias","Sorghum bicolor ","EC_3.1 hydrolase acting on ester bond & hydroxy-acyl-glutathione hydrolase *(GLX2)","protein_coding"
"Sobic.001G414500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G452700.1","No alias","Sorghum bicolor ","EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.001G492900.4","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G518000.1","No alias","Sorghum bicolor ","RLCK-VIIa receptor-like protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.001G541500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G033400.1","No alias","Sorghum bicolor ","EC_1.18 oxidoreductase acting on iron-sulfur protein as donor","protein_coding"
"Sobic.002G153500.1","No alias","Sorghum bicolor ","A-class RAB GTPase","protein_coding"
"Sobic.002G210100.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G210200.1","No alias","Sorghum bicolor ","histone *(H2B)","protein_coding"
"Sobic.002G215700.1","No alias","Sorghum bicolor ","piperideine-6-carboxylate dehydrogenase & EC_1.2 oxidoreductase acting on aldehyde or oxo group of donor","protein_coding"
"Sobic.002G265300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G273700.1","No alias","Sorghum bicolor ","EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen","protein_coding"
"Sobic.002G277200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G316800.1","No alias","Sorghum bicolor ","exoribonuclease *(RRP6L)","protein_coding"
"Sobic.002G375800.1","No alias","Sorghum bicolor ","alanine aminotransferase & EC_2.6 transferase transferring nitrogenous group","protein_coding"
"Sobic.003G003700.1","No alias","Sorghum bicolor ","component *(ABIL) of SCAR/WAVE ARP2/3-activating complex","protein_coding"
"Sobic.003G039700.1","No alias","Sorghum bicolor ","EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen","protein_coding"
"Sobic.003G057366.1","No alias","Sorghum bicolor ","histone *(H4)","protein_coding"
"Sobic.003G077300.1","No alias","Sorghum bicolor ","component *(CGI121) of tRNA N6-threonylcarbamoylation KEOPS/EKC complex","protein_coding"
"Sobic.003G148800.1","No alias","Sorghum bicolor ","E2 lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex & EC_2.3 acyltransferase","protein_coding"
"Sobic.003G184900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G336700.1","No alias","Sorghum bicolor ","LRR-VIII-1 protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.003G354500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G414600.1","No alias","Sorghum bicolor ","thiamine diphosphokinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.003G415100.1","No alias","Sorghum bicolor ","substrate adaptor of CUL3-based E3 ubiquitin ligase complex","protein_coding"
"Sobic.003G434600.1","No alias","Sorghum bicolor ","EC_1.5 oxidoreductase acting on CH-NH group of donor & pipecolate oxidase *(SOX)","protein_coding"
"Sobic.003G439900.5","No alias","Sorghum bicolor ","component *(uS19) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Sobic.004G051900.1","No alias","Sorghum bicolor ","ARF-type transcription factor","protein_coding"
"Sobic.004G066500.1","No alias","Sorghum bicolor ","organellar chaperone *(Clp-p/Clp-m)","protein_coding"
"Sobic.004G069200.1","No alias","Sorghum bicolor ","RLCK-XV receptor-like protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.004G099300.2","No alias","Sorghum bicolor ","monosaccharide transporter *(AZT)","protein_coding"
"Sobic.004G134100.3","No alias","Sorghum bicolor ","xylan alpha-1,3-arabinosyltransferase","protein_coding"
"Sobic.004G180500.1","No alias","Sorghum bicolor ","EC_1.3 oxidoreductase acting on CH-CH group of donor","protein_coding"
"Sobic.004G213100.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G284600.1","No alias","Sorghum bicolor ","component *(LHW) of TMO5-LHW cytokinin control complex & LHW/LHL-type transcription factor","protein_coding"
"Sobic.004G324300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G345800.1","No alias","Sorghum bicolor ","3-ketoacyl-CoA thiolase *(KAT1/2/5) & 3-ketoacyl-CoA thiolase *(KAT1/2/5) & EC_2.3 acyltransferase","protein_coding"
"Sobic.004G345900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.005G113300.1","No alias","Sorghum bicolor ","serine hydroxymethyltransferase *(SHM) & EC_2.1 transferase transferring one-carbon group","protein_coding"
"Sobic.005G199400.1","No alias","Sorghum bicolor ","glutathione synthetase *(GS) & EC_6.3 ligase forming carbon-nitrogen bond","protein_coding"
"Sobic.006G002400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G012900.1","No alias","Sorghum bicolor ","UDP-glucose","protein_coding"
"Sobic.006G116200.1","No alias","Sorghum bicolor ","LRR-XI protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.006G163100.2","No alias","Sorghum bicolor ","BBX class-IV transcription factor","protein_coding"
"Sobic.006G258800.1","No alias","Sorghum bicolor ","non-heme diiron quinol oxidase *(PTOX)","protein_coding"
"Sobic.006G270400.1","No alias","Sorghum bicolor ","choline transporter *(CHER/CTL1)","protein_coding"
"Sobic.007G092600.2","No alias","Sorghum bicolor ","E3 ubiquitin ligase *(XBAT3)","protein_coding"
"Sobic.007G124400.1","No alias","Sorghum bicolor ","UMF15-type solute transporter","protein_coding"
"Sobic.008G052800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.008G113600.1","No alias","Sorghum bicolor ","glutathione synthetase *(GS) & EC_6.3 ligase forming carbon-nitrogen bond","protein_coding"
"Sobic.008G130400.1","No alias","Sorghum bicolor ","component *(PFD3) of Prefoldin co-chaperone complex","protein_coding"
"Sobic.009G019200.2","No alias","Sorghum bicolor ","SD-1 protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.009G030400.1","No alias","Sorghum bicolor ","phosphatase *(EYA)","protein_coding"
"Sobic.009G040900.2","No alias","Sorghum bicolor ","sucrose-phosphate phosphatase & EC_3.1 hydrolase acting on ester bond","protein_coding"
"Sobic.009G043500.1","No alias","Sorghum bicolor ","sulfite oxidase & EC_1.8 oxidoreductase acting on sulfur group of donor","protein_coding"
"Sobic.009G154900.1","No alias","Sorghum bicolor ","component *(FtsZ2) of plastid division FtsZ prokaryotic-tubulin filaments","protein_coding"
"Sobic.009G157300.1","No alias","Sorghum bicolor ","EC_3.2 glycosylase","protein_coding"
"Sobic.009G177400.1","No alias","Sorghum bicolor ","LRR-VIII-1 protein kinase & EC_2.7 transferase transferring phosphorus-containing group & hydrogen peroxide receptor kinase *(HPCA)","protein_coding"
"Sobic.009G222400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.010G021300.2","No alias","Sorghum bicolor ","linker histone *(H1)","protein_coding"
"Sobic.010G059200.1","No alias","Sorghum bicolor ","cystathionine beta-lyase & EC_4.4 carbon-sulfur lyase & EC_2.5 transferase transferring alkyl or aryl group, other than methyl group","protein_coding"
"Sobic.010G110500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.010G175100.1","No alias","Sorghum bicolor ","SD-2 protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.010G189800.1","No alias","Sorghum bicolor ","microtubule-associated protein *(MAP65-2)","protein_coding"
"Sobic.010G210700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.010G220200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.010G225201.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.010G262500.1","No alias","Sorghum bicolor ","NAD-dependent glyceraldehyde 3-phosphate dehydrogenase & EC_1.2 oxidoreductase acting on aldehyde or oxo group of donor","protein_coding"
"Sobic.010G277700.4","No alias","Sorghum bicolor ","EC_2.5 transferase transferring alkyl or aryl group, other than methyl group","protein_coding"
"Solyc01g005010","No alias","Solanum lycopersicum","XRI1-like protein (AHRD V3.3 *** AT2G01990.2)","protein_coding"
"Solyc01g010390","No alias","Solanum lycopersicum","Beta-glucosidase, putative (AHRD V3.3 *** B9REF8_RICCO)","protein_coding"
"Solyc01g056780","No alias","Solanum lycopersicum","50S ribosomal protein L34 (AHRD V3.3 *** W9QWL4_9ROSA)","protein_coding"
"Solyc01g067750","No alias","Solanum lycopersicum","dehydroquinate dehydratase/shikimate:NADP oxidoreductase","protein_coding"
"Solyc01g068470","No alias","Solanum lycopersicum","cytochrome C oxidase subunit (AHRD V3.3 *-* AT2G38780.4)","protein_coding"
"Solyc01g079870","No alias","Solanum lycopersicum","CONSTANS interacting protein 2b","protein_coding"
"Solyc01g091730","No alias","Solanum lycopersicum","Peroxisomal membrane protein 11-1 (AHRD V3.3 *** PX111_ORYSJ)","protein_coding"
"Solyc01g094720","No alias","Solanum lycopersicum","Phosphate transporter (AHRD V3.3 *** A0A0B5WYA8_MANES)","protein_coding"
"Solyc01g097820","No alias","Solanum lycopersicum","adenine phosphoribosyltransferase-like protein, putative (DUF2358) (AHRD V3.3 *** AT3G04890.1)","protein_coding"
"Solyc01g098080","No alias","Solanum lycopersicum","BY-2 kinesin-like protein 5 (AHRD V3.3 *** Q9AVP5_TOBAC)","protein_coding"
"Solyc01g098610","No alias","Solanum lycopersicum","glutathione synthetase 2","protein_coding"
"Solyc01g105170","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc01g109700","No alias","Solanum lycopersicum","bHLH transcription factor 010","protein_coding"
"Solyc01g111120","No alias","Solanum lycopersicum","triosephosphate isomerase (AHRD V3.3 *** AT2G21170.3)","protein_coding"
"Solyc02g066920","No alias","Solanum lycopersicum","chlororespiratory reduction 7 (AHRD V3.3 *** AT5G39210.1)","protein_coding"
"Solyc02g067460","No alias","Solanum lycopersicum","Mitochondrial outer membrane protein porin (AHRD V3.3 *** A0A1D1XW30_9ARAE)","protein_coding"
"Solyc02g068080","No alias","Solanum lycopersicum","Chloride channel protein (AHRD V3.3 *** M1A9T9_SOLTU)","protein_coding"
"Solyc02g069240","No alias","Solanum lycopersicum","LOW QUALITY:O-fucosyltransferase family protein (AHRD V3.3 *** AT3G05320.3)","protein_coding"
"Solyc02g086710","No alias","Solanum lycopersicum","Monodehydroascorbate reductase (NADH)-like protein","protein_coding"
"Solyc02g093170","No alias","Solanum lycopersicum","cyclin delta-3 (AHRD V3.3 *** AT4G34090.1)","protein_coding"
"Solyc03g007480","No alias","Solanum lycopersicum","myosin heavy chain-like protein (AHRD V3.3 *** AT5G53310.1)","protein_coding"
"Solyc03g013160","No alias","Solanum lycopersicum","Amino acid transporter, putative (AHRD V3.3 *** B9T0U1_RICCO)","protein_coding"
"Solyc03g019770","No alias","Solanum lycopersicum","Testis-expressed sequence 2 protein (AHRD V3.3 *** A0A0B2Q462_GLYSO)","protein_coding"
"Solyc03g062720","No alias","Solanum lycopersicum","Photosynthetic NDH subcomplex B 2 (AHRD V3.3 *** A0A0F7GZL7_9ROSI)","protein_coding"
"Solyc03g116790","No alias","Solanum lycopersicum","Chaperone protein dnaJ (AHRD V3.3 *** A0A151SPS5_CAJCA)","protein_coding"
"Solyc04g009420","No alias","Solanum lycopersicum","PsbP domain protein (AHRD V3.3 *** G7JC63_MEDTR)","protein_coding"
"Solyc04g050930","No alias","Solanum lycopersicum","violaxanthin de-epoxidase","protein_coding"
"Solyc04g076830","No alias","Solanum lycopersicum","Phosphoglycerate mutase family protein (AHRD V3.3 *** AT1G58280.2)","protein_coding"
"Solyc04g080310","No alias","Solanum lycopersicum","DNA repair metallo-beta-lactamase family protein (AHRD V3.3 --* AT3G26680.4)","protein_coding"
"Solyc04g080870","No alias","Solanum lycopersicum","ATP-dependent protease La (LON) domain protein (AHRD V3.3 *-* AT1G75460.1)","protein_coding"
"Solyc04g081870","No alias","Solanum lycopersicum","Expansin A11","protein_coding"
"Solyc05g006050","No alias","Solanum lycopersicum","cyclinD1_1","protein_coding"
"Solyc05g009370","No alias","Solanum lycopersicum","50S ribosomal protein L15 (AHRD V3.3 *** A0A072VRA4_MEDTR)","protein_coding"
"Solyc05g054620","No alias","Solanum lycopersicum","ACT domain-containing protein (AHRD V3.3 *** AT2G39570.1)","protein_coding"
"Solyc06g007170","No alias","Solanum lycopersicum","Trichome birefringence-like protein (AHRD V3.3 *** G7IKB9_MEDTR)","protein_coding"
"Solyc06g059800","No alias","Solanum lycopersicum","ACT domain-containing protein","protein_coding"
"Solyc06g071430","No alias","Solanum lycopersicum","Protein EXECUTER 1, chloroplastic (AHRD V3.3 *** A0A1D1XJU0_9ARAE)","protein_coding"
"Solyc06g084610","No alias","Solanum lycopersicum","cotton fiber protein (AHRD V3.3 -** AT5G61710.1)","protein_coding"
"Solyc07g007280","No alias","Solanum lycopersicum","chlororespiratory reduction 6 (AHRD V3.3 *** AT2G47910.2)","protein_coding"
"Solyc07g017780","No alias","Solanum lycopersicum","(DB226) meloidogyne-induced giant cell protein","protein_coding"
"Solyc07g047710","No alias","Solanum lycopersicum","Glucan endo-1,3-beta-glucosidase-like protein (AHRD V3.3 *** G7JMV2_MEDTR)","protein_coding"
"Solyc07g065900","No alias","Solanum lycopersicum","fructose-bisphosphate aldolase, cytoplasmic isozyme 1","protein_coding"
"Solyc07g066430","No alias","Solanum lycopersicum","Obg-like ATPase 1 (AHRD V3.3 *** K4CHW8_SOLLC)","protein_coding"
"Solyc08g066800","No alias","Solanum lycopersicum","phospholipase D","protein_coding"
"Solyc08g079240","No alias","Solanum lycopersicum","(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (AHRD V3.3 *** A0A0B0NEC9_GOSAR)","protein_coding"
"Solyc08g081250","No alias","Solanum lycopersicum","Peptidase M1 family aminopeptidase N (AHRD V3.3 *** A0A072TU77_MEDTR)","protein_coding"
"Solyc08g082430","No alias","Solanum lycopersicum","Nucleoside diphosphate kinase (AHRD V3.3 *** K4CPN9_SOLLC)","protein_coding"
"Solyc08g083140","No alias","Solanum lycopersicum","Embryogenesis-associated EMB8 (AHRD V3.3 *** A0A0B0P518_GOSAR)","protein_coding"
"Solyc09g075590","No alias","Solanum lycopersicum","LOW QUALITY:BnaA01g17710D protein (AHRD V3.3 *** A0A078H5Y0_BRANA)","protein_coding"
"Solyc09g091980","No alias","Solanum lycopersicum","N-acetyltransferase mak3, putative (AHRD V3.3 *** B9RGX2_RICCO)","protein_coding"
"Solyc09g092130","No alias","Solanum lycopersicum","Sucrose-phosphate synthase (AHRD V3.3 *** A0A0U1ZVB4_LYCBA)","protein_coding"
"Solyc10g037900","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc10g051020","No alias","Solanum lycopersicum","Cytochrome P450 (AHRD V3.3 *** A9ZT56_COPJA)","protein_coding"
"Solyc10g081650","No alias","Solanum lycopersicum","carotenoid isomerase","protein_coding"
"Solyc10g081660","No alias","Solanum lycopersicum","sucrose phosphatase AF493563","protein_coding"
"Solyc10g083350","No alias","Solanum lycopersicum","SOUL heme-binding family protein (AHRD V3.3 *** AT3G10130.1)","protein_coding"
"Solyc10g085680","No alias","Solanum lycopersicum","Protein kinase superfamily protein (AHRD V3.3 *** AT5G01920.2)","protein_coding"
"Solyc10g086220","No alias","Solanum lycopersicum","12-oxophytodienoate reductase","protein_coding"
"Solyc12g009470","No alias","Solanum lycopersicum","yellow-green-2","protein_coding"
"Solyc12g010910","No alias","Solanum lycopersicum","alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** AT2G42690.1)","protein_coding"
"Solyc12g014380","No alias","Solanum lycopersicum","glucose-6-phosphate isomerase DQ451687","protein_coding"
"Solyc12g049280","No alias","Solanum lycopersicum","NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** A0A061GJI8_THECC)","protein_coding"
"Solyc12g055970","No alias","Solanum lycopersicum","Endoglucanase (AHRD V3.3 *** Q93WY9_TOBAC)","protein_coding"
"Solyc12g055980","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc12g099900","No alias","Solanum lycopersicum","SCL3 (scarecrow-like 3)","protein_coding"
"Sopen01g042160","No alias","Solanum pennellii","Eukaryotic glutathione synthase, ATP binding domain","protein_coding"