"sequence_id","alias","species","description","type"
"100916","No alias","Selaginella moellendorffii ","mRNA capping enzyme family protein","protein_coding"
"101250","No alias","Selaginella moellendorffii ","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein","protein_coding"
"111409","No alias","Selaginella moellendorffii ","tRNAse Z4","protein_coding"
"115433","No alias","Selaginella moellendorffii ","translocase 11","protein_coding"
"118138","No alias","Selaginella moellendorffii ","protein affected trafficking 2","protein_coding"
"119068","No alias","Selaginella moellendorffii ","eukaryotic translation initiation factor 4E","protein_coding"
"124961","No alias","Selaginella moellendorffii ","golgin candidate 5","protein_coding"
"124989","No alias","Selaginella moellendorffii ","Auxin-responsive GH3 family protein","protein_coding"
"131641","No alias","Selaginella moellendorffii ","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"13694","No alias","Selaginella moellendorffii ","Pectin lyase-like superfamily protein","protein_coding"
"140093","No alias","Selaginella moellendorffii ","thioredoxin domain-containing protein 9 homolog","protein_coding"
"141704","No alias","Selaginella moellendorffii ","Protein of unknown function (DUF1068)","protein_coding"
"155312","No alias","Selaginella moellendorffii ","starch synthase 2","protein_coding"
"174745","No alias","Selaginella moellendorffii ","carotenoid isomerase","protein_coding"
"175848","No alias","Selaginella moellendorffii ","actin related protein 2","protein_coding"
"227218","No alias","Selaginella moellendorffii ","minichromosome instability 12 (mis12)-like","protein_coding"
"229823","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"230692","No alias","Selaginella moellendorffii ","serine racemase","protein_coding"
"231982","No alias","Selaginella moellendorffii ","Uroporphyrinogen decarboxylase","protein_coding"
"26351","No alias","Selaginella moellendorffii ","Protein phosphatase 2C family protein","protein_coding"
"30561","No alias","Selaginella moellendorffii ","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"402772","No alias","Selaginella moellendorffii ","peptide-N-glycanase 1","protein_coding"
"403194","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"403297","No alias","Selaginella moellendorffii ","Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein","protein_coding"
"404108","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"404512","No alias","Selaginella moellendorffii ","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"406464","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"407008","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"407063","No alias","Selaginella moellendorffii ","F-box family protein","protein_coding"
"407804","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"410320","No alias","Selaginella moellendorffii ","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding"
"410607","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"412678","No alias","Selaginella moellendorffii ","MAPK phosphatase 2","protein_coding"
"414636","No alias","Selaginella moellendorffii ","Nucleotide-diphospho-sugar transferase family protein","protein_coding"
"415456","No alias","Selaginella moellendorffii ","RmlC-like cupins superfamily protein","protein_coding"
"417703","No alias","Selaginella moellendorffii ","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding"
"418970","No alias","Selaginella moellendorffii ","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"419689","No alias","Selaginella moellendorffii ","centromere/kinetochore protein, putative (ZW10)","protein_coding"
"424827","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"426435","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"428997","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"430426","No alias","Selaginella moellendorffii ","SKP1-like 20","protein_coding"
"430671","No alias","Selaginella moellendorffii ","UDP-glucosyl transferase 85A7","protein_coding"
"432186","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"432432","No alias","Selaginella moellendorffii ","Cellulose-synthase-like C5","protein_coding"
"440990","No alias","Selaginella moellendorffii ","formate dehydrogenase","protein_coding"
"441552","No alias","Selaginella moellendorffii ","DNA polymerase delta small subunit","protein_coding"
"447335","No alias","Selaginella moellendorffii ","WWE protein-protein interaction domain protein family","protein_coding"
"45004","No alias","Selaginella moellendorffii ","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"54701","No alias","Selaginella moellendorffii ","Protein of unknown function (DUF1350)","protein_coding"
"64314","No alias","Selaginella moellendorffii ","root hair specific 8","protein_coding"
"69757","No alias","Selaginella moellendorffii ","Rab5-interacting family protein","protein_coding"
"69858","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"71836","No alias","Selaginella moellendorffii ","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"74096","No alias","Selaginella moellendorffii ","phosphoenolpyruvate carboxylase-related kinase 1","protein_coding"
"76972","No alias","Selaginella moellendorffii ","SPFH/Band 7/PHB domain-containing membrane-associated protein family","protein_coding"
"78743","No alias","Selaginella moellendorffii ","Spc97 / Spc98 family of spindle pole body (SBP) component","protein_coding"
"79311","No alias","Selaginella moellendorffii ","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"79960","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"80203","No alias","Selaginella moellendorffii ","hemoglobin 1","protein_coding"
"83946","No alias","Selaginella moellendorffii ","Protein kinase superfamily protein","protein_coding"
"85759","No alias","Selaginella moellendorffii ","sorting nexin 2A","protein_coding"
"89364","No alias","Selaginella moellendorffii ","Calcium-dependent phosphotriesterase superfamily protein","protein_coding"
"91138","No alias","Selaginella moellendorffii ","Polynucleotidyl transferase, ribonuclease H-like superfamily protein","protein_coding"
"91321","No alias","Selaginella moellendorffii ","ABC transporter family protein","protein_coding"
"91404","No alias","Selaginella moellendorffii ","DNAJ heat shock N-terminal domain-containing protein","protein_coding"
"92319","No alias","Selaginella moellendorffii ","Phosphatidylinositol 3- and 4-kinase family protein","protein_coding"
"92939","No alias","Selaginella moellendorffii ","Transducin family protein / WD-40 repeat family protein","protein_coding"
"93250","No alias","Selaginella moellendorffii ","Auxin-responsive GH3 family protein","protein_coding"
"97490","No alias","Selaginella moellendorffii ","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"98843","No alias","Selaginella moellendorffii ","Prolyl oligopeptidase family protein","protein_coding"
"98948","No alias","Selaginella moellendorffii ","cytochrome P450, family 77, subfamily A, polypeptide 5 pseudogene","protein_coding"
"99263","No alias","Selaginella moellendorffii ","Nucleotide/sugar transporter family protein","protein_coding"
"A4A49_13302","No alias","Nicotiana attenuata","centromerekinetochore protein zw10-like protein","protein_coding"
"A4A49_15488","No alias","Nicotiana attenuata","tpr repeat-containing protein zip4","protein_coding"
"A4A49_34954","No alias","Nicotiana attenuata","protein mis12-like protein","protein_coding"
"AC198787.3_FG004","No alias","Zea mays","Function unknown","protein_coding"
"AC207472.3_FG001","No alias","Zea mays","Function unknown","protein_coding"
"At1g01010","No alias","Arabidopsis thaliana","NAC domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q0WV96]","protein_coding"
"At1g02230","No alias","Arabidopsis thaliana","NAC domain-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:O81913]","protein_coding"
"At1g05560","No alias","Arabidopsis thaliana","UDP-glucosyltransferase 75B1 [Source:TAIR;Acc:AT1G05560]","protein_coding"
"At1g10680","No alias","Arabidopsis thaliana","ABC transporter B family member 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGY1]","protein_coding"
"At1g10710","No alias","Arabidopsis thaliana","Protein POOR HOMOLOGOUS SYNAPSIS 1 [Source:UniProtKB/Swiss-Prot;Acc:Q45GQ7]","protein_coding"
"At1g12600","No alias","Arabidopsis thaliana","UDP-galactose/UDP-glucose transporter 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDX3]","protein_coding"
"At1g12970","No alias","Arabidopsis thaliana","Plant intracellular Ras-group-related LRR protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4Q3]","protein_coding"
"At1g21210","No alias","Arabidopsis thaliana","Wall-associated receptor kinase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMN6]","protein_coding"
"At1g36095","No alias","Arabidopsis thaliana","DNA binding protein [Source:UniProtKB/TrEMBL;Acc:F4I1K8]","protein_coding"
"At1g46336","No alias","Arabidopsis thaliana","Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q9C634]","protein_coding"
"At1g47660","No alias","Arabidopsis thaliana","unknown protein; Has 5165 Blast hits to 2753 proteins in 450 species: Archae - 12; Bacteria - 1193; Metazoa - 731; Fungi - 361; Plants - 761; Viruses - 176; Other Eukaryotes - 1931 (source: NCBI BLink). [Source:TAIR;Acc:AT1G47660]","protein_coding"
"At1g47810","No alias","Arabidopsis thaliana","F-box protein At1g47810 [Source:UniProtKB/Swiss-Prot;Acc:Q4PT00]","protein_coding"
"At1g48470","No alias","Arabidopsis thaliana","Glutamine synthetase cytosolic isozyme 1-5 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXW5]","protein_coding"
"At1g49890","No alias","Arabidopsis thaliana","QWRF motif-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q94AI1]","protein_coding"
"At1g52060","No alias","Arabidopsis thaliana","Jacalin-related lectin 9 [Source:UniProtKB/Swiss-Prot;Acc:F4IB95]","protein_coding"
"At1g52570","No alias","Arabidopsis thaliana","Phospholipase D alpha 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSQ9]","protein_coding"
"At1g55800","No alias","Arabidopsis thaliana","Domain of unknown function (DUF2431) [Source:TAIR;Acc:AT1G55800]","protein_coding"
"At1g56430","No alias","Arabidopsis thaliana","Probable nicotianamine synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7X5]","protein_coding"
"At1g61940","No alias","Arabidopsis thaliana","Putative Tubby-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:O80699]","protein_coding"
"At1g62450","No alias","Arabidopsis thaliana","Immunoglobulin E-set superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HYS9]","protein_coding"
"At1g64260","No alias","Arabidopsis thaliana","MuDR family transposase [Source:UniProtKB/TrEMBL;Acc:Q9C7V1]","protein_coding"
"At1g65610","No alias","Arabidopsis thaliana","Endoglucanase 7 [Source:UniProtKB/Swiss-Prot;Acc:O04478]","protein_coding"
"At1g65990","No alias","Arabidopsis thaliana","Peroxiredoxin-2A [Source:UniProtKB/Swiss-Prot;Acc:Q7G959]","protein_coding"
"At1g73780","No alias","Arabidopsis thaliana","Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C9T4]","protein_coding"
"At1g73990","No alias","Arabidopsis thaliana","Serine protease SPPA, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9C9C0]","protein_coding"
"At1g77700","No alias","Arabidopsis thaliana","Pathogenesis-related thaumatin superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9CA24]","protein_coding"
"At1g80590","No alias","Arabidopsis thaliana","Probable WRKY transcription factor 66 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8M6]","protein_coding"
"At2g01200","No alias","Arabidopsis thaliana","Auxin-responsive protein IAA32 [Source:UniProtKB/Swiss-Prot;Acc:Q8RYC6]","protein_coding"
"At2g02250","No alias","Arabidopsis thaliana","Putative F-box protein PP2-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVR5]","protein_coding"
"At2g03710","No alias","Arabidopsis thaliana","Agamous-like MADS-box protein AGL3 [Source:UniProtKB/Swiss-Prot;Acc:P29383]","protein_coding"
"At2g03810","No alias","Arabidopsis thaliana","18S pre-ribosomal assembly protein gar2-like protein [Source:UniProtKB/TrEMBL;Acc:F4ITB8]","protein_coding"
"At2g17310","No alias","Arabidopsis thaliana","Protein SUPPRESSOR OF NIM1 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LL17]","protein_coding"
"At2g19010","No alias","Arabidopsis thaliana","GDSL-like Lipase/Acylhydrolase superfamily protein [Source:TAIR;Acc:AT2G19010]","protein_coding"
"At2g22940","No alias","Arabidopsis thaliana","Uncharacterized protein At2g22940 [Source:UniProtKB/TrEMBL;Acc:O81011]","protein_coding"
"At2g24130","No alias","Arabidopsis thaliana","Leucine-rich receptor-like protein kinase family protein [Source:TAIR;Acc:AT2G24130]","protein_coding"
"At2g24950","No alias","Arabidopsis thaliana","Transmembrane protein, putative (DUF239) [Source:UniProtKB/TrEMBL;Acc:Q9SK38]","protein_coding"
"At2g27220","No alias","Arabidopsis thaliana","BEL1-like homeodomain 5 [Source:TAIR;Acc:AT2G27220]","protein_coding"
"At2g27350","No alias","Arabidopsis thaliana","OTU-containing deubiquitinating enzyme OTU6 [Source:UniProtKB/TrEMBL;Acc:F4IFS7]","protein_coding"
"At2g27550","No alias","Arabidopsis thaliana","Protein CENTRORADIALIS-like [Source:UniProtKB/Swiss-Prot;Acc:Q9ZNV5]","protein_coding"
"At2g28670","No alias","Arabidopsis thaliana","Disease resistance-responsive (dirigent-like protein) family protein [Source:TAIR;Acc:AT2G28670]","protein_coding"
"At2g29770","No alias","Arabidopsis thaliana","F-box/LRR-repeat/kelch-repeat protein At2g29770 [Source:UniProtKB/Swiss-Prot;Acc:O82379]","protein_coding"
"At2g31050","No alias","Arabidopsis thaliana","Cupredoxin superfamily protein [Source:UniProtKB/TrEMBL;Acc:O82761]","protein_coding"
"At2g32900","No alias","Arabidopsis thaliana","Centromere/kinetochore protein zw10 homolog [Source:UniProtKB/Swiss-Prot;Acc:O48626]","protein_coding"
"At2g33020","No alias","Arabidopsis thaliana","Receptor like protein 24 [Source:UniProtKB/Swiss-Prot;Acc:O49329]","protein_coding"
"At2g34910","No alias","Arabidopsis thaliana","At2g34910 [Source:UniProtKB/TrEMBL;Acc:O64755]","protein_coding"
"At2g40580","No alias","Arabidopsis thaliana","At2g40580 [Source:UniProtKB/TrEMBL;Acc:O22877]","protein_coding"
"At2g41310","No alias","Arabidopsis thaliana","Two-component response regulator ARR8 [Source:UniProtKB/Swiss-Prot;Acc:O80365]","protein_coding"
"At2g44560","No alias","Arabidopsis thaliana","Endoglucanase 14 [Source:UniProtKB/Swiss-Prot;Acc:Q8S8Q4]","protein_coding"
"At3g03900","No alias","Arabidopsis thaliana","Adenylyl-sulfate kinase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRW7]","protein_coding"
"At3g06990","No alias","Arabidopsis thaliana","Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:Q9M900]","protein_coding"
"At3g07250","No alias","Arabidopsis thaliana","RNA-binding (RRM-RBD-RNP motif) domain nuclear transport factor 2 family protein [Source:UniProtKB/TrEMBL;Acc:F4JED3]","protein_coding"
"At3g07840","No alias","Arabidopsis thaliana","Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SFD0]","protein_coding"
"At3g08670","No alias","Arabidopsis thaliana","At3g08670 [Source:UniProtKB/TrEMBL;Acc:Q9C9Y9]","protein_coding"
"At3g12660","No alias","Arabidopsis thaliana","Fasciclin-like arabinogalactan protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTW9]","protein_coding"
"At3g15170","No alias","Arabidopsis thaliana","CUC1 [Source:UniProtKB/TrEMBL;Acc:A0A178V703]","protein_coding"
"At3g20450","No alias","Arabidopsis thaliana","At3g20450 [Source:UniProtKB/TrEMBL;Acc:Q9LTP7]","protein_coding"
"At3g22020","No alias","Arabidopsis thaliana","Receptor-like protein kinase-related family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LLU2]","protein_coding"
"At3g22870","No alias","Arabidopsis thaliana","Putative F-box/kelch-repeat protein At3g22870 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIL1]","protein_coding"
"At3g25080","No alias","Arabidopsis thaliana","UPF0725 protein At3g25080 [Source:UniProtKB/Swiss-Prot;Acc:Q6E244]","protein_coding"
"At3g27840","No alias","Arabidopsis thaliana","50S ribosomal protein L12-2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P36211]","protein_coding"
"At3g29020","No alias","Arabidopsis thaliana","Myb domain protein 110 [Source:UniProtKB/TrEMBL;Acc:F4J1R5]","protein_coding"
"At3g51300","No alias","Arabidopsis thaliana","Rac-like GTP-binding protein ARAC11 [Source:UniProtKB/Swiss-Prot;Acc:P92978]","protein_coding"
"At3g58860","No alias","Arabidopsis thaliana","Putative F-box protein At3g58860 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXR6]","protein_coding"
"At3g60700","No alias","Arabidopsis thaliana","Uncharacterized protein T4C21_110 [Source:UniProtKB/TrEMBL;Acc:Q9LZZ3]","protein_coding"
"At3g63360","No alias","Arabidopsis thaliana","Defensin-like protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1V4]","protein_coding"
"At4g01660","No alias","Arabidopsis thaliana","Protein ABC transporter 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SBB2]","protein_coding"
"At4g02070","No alias","Arabidopsis thaliana","DNA mismatch repair protein MSH6 [Source:UniProtKB/Swiss-Prot;Acc:O04716]","protein_coding"
"At4g02650","No alias","Arabidopsis thaliana","Putative clathrin assembly protein At4g02650 [Source:UniProtKB/Swiss-Prot;Acc:Q8GX47]","protein_coding"
"At4g05230","No alias","Arabidopsis thaliana","Ubiquitin-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9M0X2]","protein_coding"
"At4g05310","No alias","Arabidopsis thaliana","Ubiquitin-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9M0W4]","protein_coding"
"At4g10520","No alias","Arabidopsis thaliana","Subtilisin-like protease SBT3.9 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSB0]","protein_coding"
"At4g10700","No alias","Arabidopsis thaliana","F-box/kelch-repeat protein [Source:UniProtKB/TrEMBL;Acc:O82492]","protein_coding"
"At4g13320","No alias","Arabidopsis thaliana","At4g13320 [Source:UniProtKB/TrEMBL;Acc:Q9T0K3]","protein_coding"
"At4g15750","No alias","Arabidopsis thaliana","AT4g15750/dl3915c [Source:UniProtKB/TrEMBL;Acc:O23426]","protein_coding"
"At4g16460","No alias","Arabidopsis thaliana","Zinc finger CCCH domain protein [Source:UniProtKB/TrEMBL;Acc:Q1PE76]","protein_coding"
"At4g18810","No alias","Arabidopsis thaliana","NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JRN8]","protein_coding"
"At4g20080","No alias","Arabidopsis thaliana","Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:O49435]","protein_coding"
"At4g25120","No alias","Arabidopsis thaliana","ATP-dependent DNA helicase SRS2-like protein At4g25120 [Source:UniProtKB/Swiss-Prot;Acc:D1KF50]","protein_coding"
"At4g28380","No alias","Arabidopsis thaliana","Extensin-like protein [Source:UniProtKB/TrEMBL;Acc:O49448]","protein_coding"
"At4g28940","No alias","Arabidopsis thaliana","Phosphorylase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JM51]","protein_coding"
"At4g34138","No alias","Arabidopsis thaliana","Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8PUI6]","protein_coding"
"At5g04030","No alias","Arabidopsis thaliana","Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q9LZA7]","protein_coding"
"At5g06660","No alias","Arabidopsis thaliana","Calcium load-activated calcium channel [Source:UniProtKB/TrEMBL;Acc:Q9FG04]","protein_coding"
"At5g08560","No alias","Arabidopsis thaliana","WD repeat-containing protein 26 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9FNN2]","protein_coding"
"At5g10280","No alias","Arabidopsis thaliana","Transcription factor MYB92 [Source:UniProtKB/Swiss-Prot;Acc:Q9SBF3]","protein_coding"
"At5g13280","No alias","Arabidopsis thaliana","AK1 [Source:UniProtKB/TrEMBL;Acc:A0A178UUC2]","protein_coding"
"At5g14020","No alias","Arabidopsis thaliana","Endosomal targeting BRO1-like domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q0WSL5]","protein_coding"
"At5g14340","No alias","Arabidopsis thaliana","myb domain protein 40 [Source:TAIR;Acc:AT5G14340]","protein_coding"
"At5g14980","No alias","Arabidopsis thaliana","Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LFQ7]","protein_coding"
"At5g15725","No alias","Arabidopsis thaliana","Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:F4KB79]","protein_coding"
"At5g17680","No alias","Arabidopsis thaliana","Disease resistance protein (TIR-NBS-LRR class) [Source:UniProtKB/TrEMBL;Acc:Q9FN83]","protein_coding"
"At5g18220","No alias","Arabidopsis thaliana","Beta-1,3-glucanase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9FK49]","protein_coding"
"At5g22340","No alias","Arabidopsis thaliana","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 58 Blast hits to 58 proteins in 20 species: Archa /.../ Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). [Source:TAIR;Acc:AT5G22340]","protein_coding"
"At5g23650","No alias","Arabidopsis thaliana","Homeodomain-like transcriptional regulator [Source:UniProtKB/TrEMBL;Acc:Q9LT00]","protein_coding"
"At5g23710","No alias","Arabidopsis thaliana","DNA-directed RNA polymerase III subunit RPC6 [Source:UniProtKB/TrEMBL;Acc:Q9LSZ5]","protein_coding"
"At5g24130","No alias","Arabidopsis thaliana","At5g24130 [Source:UniProtKB/TrEMBL;Acc:Q9FL61]","protein_coding"
"At5g35520","No alias","Arabidopsis thaliana","MIS12 [Source:UniProtKB/TrEMBL;Acc:A0A178UCY0]","protein_coding"
"At5g35890","No alias","Arabidopsis thaliana","Beta-galactosidase related protein [Source:UniProtKB/TrEMBL;Acc:Q9FFL4]","protein_coding"
"At5g38970","No alias","Arabidopsis thaliana","Cytochrome P450 85A1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMA5]","protein_coding"
"At5g39910","No alias","Arabidopsis thaliana","Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4KFW5]","protein_coding"
"At5g41090","No alias","Arabidopsis thaliana","At5g41090 [Source:UniProtKB/TrEMBL;Acc:Q9FLM0]","protein_coding"
"At5g41890","No alias","Arabidopsis thaliana","GDSL-like Lipase/Acylhydrolase superfamily protein [Source:TAIR;Acc:AT5G41890]","protein_coding"
"At5g43590","No alias","Arabidopsis thaliana","Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein [Source:TAIR;Acc:AT5G43590]","protein_coding"
"At5g48390","No alias","Arabidopsis thaliana","TPR repeat-containing protein ZIP4 [Source:UniProtKB/Swiss-Prot;Acc:B0M1H3]","protein_coding"
"At5g48690","No alias","Arabidopsis thaliana","Ubiquitin-associated (UBA)/TS-N domain protein [Source:UniProtKB/TrEMBL;Acc:Q5XV09]","protein_coding"
"At5g50590","No alias","Arabidopsis thaliana","11-beta-hydroxysteroid dehydrogenase-like 4A [Source:UniProtKB/Swiss-Prot;Acc:P0DKC7]","protein_coding"
"At5g51980","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein [Source:TAIR;Acc:AT5G51980]","protein_coding"
"At5g52430","No alias","Arabidopsis thaliana","At5g52430 [Source:UniProtKB/TrEMBL;Acc:Q9FHB7]","protein_coding"
"At5g54230","No alias","Arabidopsis thaliana","Myb domain protein 49 [Source:UniProtKB/TrEMBL;Acc:Q9SPG6]","protein_coding"
"At5g58380","No alias","Arabidopsis thaliana","CBL-interacting serine/threonine-protein kinase 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9C562]","protein_coding"
"At5g60070","No alias","Arabidopsis thaliana","Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9LVG7]","protein_coding"
"At5g63920","No alias","Arabidopsis thaliana","DNA topoisomerase 3-alpha [Source:UniProtKB/Swiss-Prot;Acc:Q9LVP1]","protein_coding"
"At5g64990","No alias","Arabidopsis thaliana","RAB GTPase homolog H1A [Source:UniProtKB/TrEMBL;Acc:F4KGG4]","protein_coding"
"Bradi1g00847","No alias","Brachypodium distachyon","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"Bradi1g02645","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g05030","No alias","Brachypodium distachyon","vesicle-associated membrane protein 726","protein_coding"
"Bradi1g09200","No alias","Brachypodium distachyon","CwfJ-like family protein","protein_coding"
"Bradi1g10720","No alias","Brachypodium distachyon","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Bradi1g10880","No alias","Brachypodium distachyon","eukaryotic release factor 1-3","protein_coding"
"Bradi1g10900","No alias","Brachypodium distachyon","eukaryotic release factor 1-3","protein_coding"
"Bradi1g11340","No alias","Brachypodium distachyon","geminivirus rep interacting kinase 2","protein_coding"
"Bradi1g12030","No alias","Brachypodium distachyon","Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein","protein_coding"
"Bradi1g12750","No alias","Brachypodium distachyon","Pyruvate kinase family protein","protein_coding"
"Bradi1g13770","No alias","Brachypodium distachyon","NagB/RpiA/CoA transferase-like superfamily protein","protein_coding"
"Bradi1g15070","No alias","Brachypodium distachyon","Thioredoxin superfamily protein","protein_coding"
"Bradi1g18180","No alias","Brachypodium distachyon","protein arginine methyltransferase 4B","protein_coding"
"Bradi1g18305","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g19390","No alias","Brachypodium distachyon","BTB-POZ and MATH domain 2","protein_coding"
"Bradi1g19670","No alias","Brachypodium distachyon","cytochrome p450 78a9","protein_coding"
"Bradi1g20700","No alias","Brachypodium distachyon","translocase inner membrane subunit 44-2","protein_coding"
"Bradi1g22126","No alias","Brachypodium distachyon","Peptidase family M48 family protein","protein_coding"
"Bradi1g23100","No alias","Brachypodium distachyon","SUMO-activating enzyme 2","protein_coding"
"Bradi1g27050","No alias","Brachypodium distachyon","casein kinase II  beta subunit 4","protein_coding"
"Bradi1g29340","No alias","Brachypodium distachyon","Putative integral membrane protein conserved region (DUF2404)","protein_coding"
"Bradi1g29930","No alias","Brachypodium distachyon","RING/FYVE/PHD zinc finger superfamily protein","protein_coding"
"Bradi1g33310","No alias","Brachypodium distachyon","EPS15 homology domain 1","protein_coding"
"Bradi1g33457","No alias","Brachypodium distachyon","cysteine-rich RLK (RECEPTOR-like protein kinase) 10","protein_coding"
"Bradi1g35742","No alias","Brachypodium distachyon","NAD(P)-binding Rossmann-fold superfamily protein","protein_coding"
"Bradi1g42700","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g43430","No alias","Brachypodium distachyon","RPM1-interacting protein 4 (RIN4) family protein","protein_coding"
"Bradi1g47340","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g51430","No alias","Brachypodium distachyon","Transcription factor GTE6","protein_coding"
"Bradi1g51630","No alias","Brachypodium distachyon","Leucine-rich repeat protein kinase family protein","protein_coding"
"Bradi1g55000","No alias","Brachypodium distachyon","phosphate transporter traffic facilitator1","protein_coding"
"Bradi1g62210","No alias","Brachypodium distachyon","Adaptin family protein","protein_coding"
"Bradi1g63940","No alias","Brachypodium distachyon","Endoplasmic reticulum vesicle transporter protein","protein_coding"
"Bradi1g64410","No alias","Brachypodium distachyon","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Bradi1g65000","No alias","Brachypodium distachyon","U2 small nuclear ribonucleoprotein B","protein_coding"
"Bradi1g68520","No alias","Brachypodium distachyon","B-cell receptor-associated 31-like","protein_coding"
"Bradi1g71830","No alias","Brachypodium distachyon","ubiquitin-specific protease 3","protein_coding"
"Bradi1g74910","No alias","Brachypodium distachyon","Ras-related small GTP-binding family protein","protein_coding"
"Bradi1g75530","No alias","Brachypodium distachyon","Cysteinyl-tRNA synthetase, class Ia family protein","protein_coding"
"Bradi2g00570","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi2g03120","No alias","Brachypodium distachyon","Transcription elongation factor (TFIIS) family protein","protein_coding"
"Bradi2g03750","No alias","Brachypodium distachyon","Protein of unknown function (DUF1664)","protein_coding"
"Bradi2g04460","No alias","Brachypodium distachyon","DEAD box RNA helicase 1","protein_coding"
"Bradi2g05530","No alias","Brachypodium distachyon","AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein","protein_coding"
"Bradi2g13367","No alias","Brachypodium distachyon","Chaperone DnaJ-domain superfamily protein","protein_coding"
"Bradi2g13710","No alias","Brachypodium distachyon","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein","protein_coding"
"Bradi2g18330","No alias","Brachypodium distachyon","nucleosome assembly protein 1;2","protein_coding"
"Bradi2g21017","No alias","Brachypodium distachyon","protease-related","protein_coding"
"Bradi2g23730","No alias","Brachypodium distachyon","RNI-like superfamily protein","protein_coding"
"Bradi2g31070","No alias","Brachypodium distachyon","saposin B domain-containing protein","protein_coding"
"Bradi2g31830","No alias","Brachypodium distachyon","catalytics","protein_coding"
"Bradi2g33580","No alias","Brachypodium distachyon","high mobility group","protein_coding"
"Bradi2g35807","No alias","Brachypodium distachyon","tonneau 2 (TON2)","protein_coding"
"Bradi2g44070","No alias","Brachypodium distachyon","adaptin family protein","protein_coding"
"Bradi2g49760","No alias","Brachypodium distachyon","Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain","protein_coding"
"Bradi2g57415","No alias","Brachypodium distachyon","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Bradi2g57777","No alias","Brachypodium distachyon","SNF7 family protein","protein_coding"
"Bradi2g60740","No alias","Brachypodium distachyon","SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein","protein_coding"
"Bradi2g62270","No alias","Brachypodium distachyon","protein affected trafficking 2","protein_coding"
"Bradi3g02580","No alias","Brachypodium distachyon","basal transcription factor complex subunit-related","protein_coding"
"Bradi3g08370","No alias","Brachypodium distachyon","Calcium-binding EF hand family protein","protein_coding"
"Bradi3g11530","No alias","Brachypodium distachyon","translocation protein-related","protein_coding"
"Bradi3g16350","No alias","Brachypodium distachyon","Tho complex subunit 7/Mft1p","protein_coding"
"Bradi3g16990","No alias","Brachypodium distachyon","BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins)","protein_coding"
"Bradi3g19400","No alias","Brachypodium distachyon","SIN-like family protein","protein_coding"
"Bradi3g30250","No alias","Brachypodium distachyon","RNAhelicase-like 8","protein_coding"
"Bradi3g33900","No alias","Brachypodium distachyon","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding"
"Bradi3g34500","No alias","Brachypodium distachyon","Proteasome component (PCI) domain protein","protein_coding"
"Bradi3g37000","No alias","Brachypodium distachyon","Domain of unknown function (DUF298)","protein_coding"
"Bradi3g41393","No alias","Brachypodium distachyon","ARM repeat superfamily protein","protein_coding"
"Bradi3g45760","No alias","Brachypodium distachyon","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Bradi3g47640","No alias","Brachypodium distachyon","beta-1,4-N-acetylglucosaminyltransferase family protein","protein_coding"
"Bradi3g48930","No alias","Brachypodium distachyon","minichromosome instability 12 (mis12)-like","protein_coding"
"Bradi3g51340","No alias","Brachypodium distachyon","Protein of unknown function (DUF788)","protein_coding"
"Bradi3g60446","No alias","Brachypodium distachyon","NB-ARC domain-containing disease resistance protein","protein_coding"
"Bradi3g60820","No alias","Brachypodium distachyon","alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase, putative","protein_coding"
"Bradi4g05110","No alias","Brachypodium distachyon","CLUB","protein_coding"
"Bradi4g16820","No alias","Brachypodium distachyon","centromere/kinetochore protein, putative (ZW10)","protein_coding"
"Bradi4g34050","No alias","Brachypodium distachyon","methyl-CPG-binding domain protein 02","protein_coding"
"Bradi4g35750","No alias","Brachypodium distachyon","Ubiquitin carboxyl-terminal hydrolase family protein","protein_coding"
"Bradi4g36330","No alias","Brachypodium distachyon","XAP5 family protein","protein_coding"
"Bradi4g37120","No alias","Brachypodium distachyon","flavin-dependent monooxygenase 1","protein_coding"
"Bradi4g38750","No alias","Brachypodium distachyon","RING/U-box superfamily protein","protein_coding"
"Bradi4g39430","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi4g41210","No alias","Brachypodium distachyon","Eukaryotic aspartyl protease family protein","protein_coding"
"Bradi4g43257","No alias","Brachypodium distachyon","Saccharopine dehydrogenase","protein_coding"
"Bradi4g43990","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi5g01230","No alias","Brachypodium distachyon","UDP-Glycosyltransferase superfamily protein","protein_coding"
"Bradi5g04860","No alias","Brachypodium distachyon","RNA binding (RRM/RBD/RNP motifs) family protein","protein_coding"
"Bradi5g05170","No alias","Brachypodium distachyon","Protein of unknown function, DUF647","protein_coding"
"Bradi5g06695","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi5g07790","No alias","Brachypodium distachyon","vacuolar protein sorting 11","protein_coding"
"Bradi5g12000","No alias","Brachypodium distachyon","ubiquitin-specific protease 4","protein_coding"
"Bradi5g14550","No alias","Brachypodium distachyon","RNA binding (RRM/RBD/RNP motifs) family protein","protein_coding"
"Bradi5g17850","No alias","Brachypodium distachyon","Pectin lyase-like superfamily protein","protein_coding"
"Bradi5g21937","No alias","Brachypodium distachyon","gamma-soluble NSF attachment protein","protein_coding"
"Bradi5g24930","No alias","Brachypodium distachyon","molybdopterin biosynthesis CNX1 protein / molybdenum cofactor biosynthesis enzyme CNX1 (CNX1)","protein_coding"
"Bradi5g27367","No alias","Brachypodium distachyon","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Bradi5g27500","No alias","Brachypodium distachyon","transportin 1","protein_coding"
"Brara.A00487.1","No alias","Brassica rapa","glutaredoxin","protein_coding"
"Brara.A00527.1","No alias","Brassica rapa","E3 ubiquitin ligase component *(Doa10) of ER-associated protein degradation (ERAD) machinery","protein_coding"
"Brara.A00859.1","No alias","Brassica rapa","LRR-XI protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.A02188.1","No alias","Brassica rapa","EC_3.1 hydrolase acting on ester bond & pectin methylesterase","protein_coding"
"Brara.A02448.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A02891.1","No alias","Brassica rapa","substrate adaptor *(SKIP30) of SCF E3 ubiquitin ligase complex","protein_coding"
"Brara.A02944.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A02953.1","No alias","Brassica rapa","membrane anchor component *(PEX3) of PEX19 insertion system","protein_coding"
"Brara.A03550.1","No alias","Brassica rapa","E2 MUB ubiquitin-conjugating enzyme","protein_coding"
"Brara.B00185.1","No alias","Brassica rapa","steroid 3-dehydrogenase *(CPD) & EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen","protein_coding"
"Brara.B00478.1","No alias","Brassica rapa","regulatory protein (GILP) of programmed cell death","protein_coding"
"Brara.B00965.1","No alias","Brassica rapa","mitochondrial fission factor *(NETWORK/ELM1)","protein_coding"
"Brara.B01098.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B01111.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B01121.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B01927.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B02307.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B02747.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B02784.1","No alias","Brassica rapa","EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding"
"Brara.B03513.1","No alias","Brassica rapa","CrlRLK1 protein kinase & RALF-peptide receptor *(CrRLK1L) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.B03589.1","No alias","Brassica rapa","methylation reader Alfin of PRC1 complex","protein_coding"
"Brara.B03608.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B03642.1","No alias","Brassica rapa","ABC1 atypical protein kinase","protein_coding"
"Brara.B03941.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C00031.1","No alias","Brassica rapa","regulatory E3 ubiquitin ligase (APD) involved in gametogenesis","protein_coding"
"Brara.C00329.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C00770.1","No alias","Brassica rapa","pre-mRNA-processing protein *(LUC7)","protein_coding"
"Brara.C01255.1","No alias","Brassica rapa","RING-H2-class BTL-subclass E3 ubiquitin ligase","protein_coding"
"Brara.C01416.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C01686.1","No alias","Brassica rapa","component *(MIP1) of DSL1 (Depends-on-SLY1) complex","protein_coding"
"Brara.C01904.1","No alias","Brassica rapa","ULK protein kinase & kinase component *(ATG1) of ATG1-13 autophagosome assembly control complex & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.C02344.1","No alias","Brassica rapa","RAV/NGATHA-type transcription factor","protein_coding"
"Brara.D00425.1","No alias","Brassica rapa","EC_4.2 carbon-oxygen lyase","protein_coding"
"Brara.D00450.1","No alias","Brassica rapa","component *(GCN5/ADA4) of SAGA transcription co-activator complex","protein_coding"
"Brara.D00665.1","No alias","Brassica rapa","component *(ArpC4) of Arp2/3 actin polymerization initiation complex","protein_coding"
"Brara.D00822.1","No alias","Brassica rapa","component *(MIS12) of kinetochore MIS12 complex","protein_coding"
"Brara.D02632.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E00385.1","No alias","Brassica rapa","EC_2.4 glycosyltransferase","protein_coding"
"Brara.E01105.1","No alias","Brassica rapa","component *(MIP1) of DSL1 (Depends-on-SLY1) complex","protein_coding"
"Brara.E02390.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E02485.1","No alias","Brassica rapa","phospholipase-D *(PLD-zeta)","protein_coding"
"Brara.E02542.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E02687.1","No alias","Brassica rapa","lipase *(OBL)","protein_coding"
"Brara.E02982.1","No alias","Brassica rapa","component *(QCR8) of cytochrome c reductase complex","protein_coding"
"Brara.F00860.1","No alias","Brassica rapa","cell-plate-SNARE assembly protein *(KEULE)","protein_coding"
"Brara.F00883.1","No alias","Brassica rapa","1-aminocyclopropane-1-carboxylate (ACC) oxidase & EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen","protein_coding"
"Brara.F01024.1","No alias","Brassica rapa","signal transducer of abscisic acid perception *(RHA2)","protein_coding"
"Brara.F02731.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F02971.1","No alias","Brassica rapa","RNA editing factor *(LPA66)","protein_coding"
"Brara.F03009.1","No alias","Brassica rapa","meiotic crossover scaffold protein *(SPO22/ZIP4)","protein_coding"
"Brara.F03684.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G00130.1","No alias","Brassica rapa","substrate adaptor of SCF E3 ubiquitin ligase complex","protein_coding"
"Brara.G00307.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G00396.1","No alias","Brassica rapa","EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.G00502.1","No alias","Brassica rapa","chromatin-silencing modulator (BLI) of PRC2 histone methylation complex","protein_coding"
"Brara.G00811.1","No alias","Brassica rapa","transcriptional co-regulator *(ZPR)","protein_coding"
"Brara.G00969.1","No alias","Brassica rapa","beta-type carbonic anhydrase","protein_coding"
"Brara.G01108.1","No alias","Brassica rapa","glycolipid transfer protein *(GLTP)","protein_coding"
"Brara.G01902.1","No alias","Brassica rapa","transcriptional co-regulator *(ZPR)","protein_coding"
"Brara.G02134.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G02448.1","No alias","Brassica rapa","rRNA processing factor *(IRP1)","protein_coding"
"Brara.G03012.1","No alias","Brassica rapa","HD-ZIP I/II-type transcription factor","protein_coding"
"Brara.G03239.1","No alias","Brassica rapa","centromere maintenance factor *(GIP) & accessory component *(GIP1) of microtubule Tubulin heterodimer formation","protein_coding"
"Brara.H00010.1","No alias","Brassica rapa","LRR-VIII-2 protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.H00088.1","No alias","Brassica rapa","assembly factor (eIF1) of eIF1","protein_coding"
"Brara.H00091.1","No alias","Brassica rapa","proteasome assembly quality control factor *(ECM29)","protein_coding"
"Brara.H00185.1","No alias","Brassica rapa","nitrilespecifier protein","protein_coding"
"Brara.H00268.1","No alias","Brassica rapa","non-proteolytic core component *(ClpR) of chloroplast Clp-type protease complex","protein_coding"
"Brara.H00270.1","No alias","Brassica rapa","PRC2-recruiting factor (TRB) of PRC2 histone methylation complex","protein_coding"
"Brara.H00292.1","No alias","Brassica rapa","U-Box-group-III E3 ubiquitin ligase","protein_coding"
"Brara.H00373.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H02302.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I00281.1","No alias","Brassica rapa","transcriptional co-activator *(BET/GTE)","protein_coding"
"Brara.I00541.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I00661.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I00775.1","No alias","Brassica rapa","substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin ligase complex","protein_coding"
"Brara.I00915.1","No alias","Brassica rapa","regulatory protein *(CAP2) involved in anterograde trafficking","protein_coding"
"Brara.I00939.1","No alias","Brassica rapa","monogalactosyldiacylglycerol synthase & EC_2.4 glycosyltransferase","protein_coding"
"Brara.I01529.1","No alias","Brassica rapa","MADS/AGL-type transcription factor","protein_coding"
"Brara.I01546.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I01887.1","No alias","Brassica rapa","substrate adaptor of SCF E3 ubiquitin ligase complex","protein_coding"
"Brara.I02687.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I02708.1","No alias","Brassica rapa","amino acid transporter *(LAT)","protein_coding"
"Brara.I02718.1","No alias","Brassica rapa","UMF23-type solute transporter","protein_coding"
"Brara.I03037.1","No alias","Brassica rapa","EC_2.3 acyltransferase","protein_coding"
"Brara.I03154.1","No alias","Brassica rapa","substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase complex","protein_coding"
"Brara.I03421.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I03936.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I04872.1","No alias","Brassica rapa","EC_2.4 glycosyltransferase & beta-1,4-mannosyl-transferase *(ALG1)","protein_coding"
"Brara.J01108.1","No alias","Brassica rapa","MYB-RELATED transcription factor *(MYB-R-R)","protein_coding"
"Brara.J01228.1","No alias","Brassica rapa","regulatory factor SNX2 of Retromer protein recycling complex","protein_coding"
"Brara.J01673.1","No alias","Brassica rapa","A1-class (Pepsin) protease","protein_coding"
"Brara.J02534.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.K00446.1","No alias","Brassica rapa","component *(INB1) of INO80 chromatin remodeling complex","protein_coding"
"Brara.K00605.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.K01114.1","No alias","Brassica rapa","EC_5.1 racemase or epimerase","protein_coding"
"Brara.K01190.1","No alias","Brassica rapa","Golgin-type membrane tethering protein *(CASP)","protein_coding"
"Brara.K01215.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.K01334.1","No alias","Brassica rapa","small GTPase *(ROP)","protein_coding"
"Brara.K01563.1","No alias","Brassica rapa","Unknown function","protein_coding"
"evm.model.contig_2029.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2033.2","No alias","Porphyridium purpureum","(at1g80480 : 142.0) plastid transcriptionally active 17 (PTAC17); LOCATED IN: plastid chromosome, chloroplast stroma, chloroplast, nucleoid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12) biosynthesis CobW-like (InterPro:IPR003495), Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal (InterPro:IPR011629); BEST Arabidopsis thaliana protein match is: Cobalamin biosynthesis CobW-like protein (TAIR:AT1G15730.1); Has 22612 Blast hits to 14499 proteins in 1972 species: Archae - 190; Bacteria - 10146; Metazoa - 2946; Fungi - 801; Plants - 655; Viruses - 16; Other Eukaryotes - 7858 (source: NCBI BLink). & (gnl|cdd|68872 : 117.0) no description available & (reliability: 284.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2033.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2039.11","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2040.6","No alias","Porphyridium purpureum","(at3g07810 : 181.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G47620.2); Has 54120 Blast hits to 30425 proteins in 1467 species: Archae - 38; Bacteria - 13586; Metazoa - 19029; Fungi - 4969; Plants - 7799; Viruses - 151; Other Eukaryotes - 8548 (source: NCBI BLink). & (gnl|cdd|68872 : 123.0) no description available & (q08935|roc1_nicsy : 85.5) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A) - Nicotiana sylvestris (Wood tobacco) & (reliability: 362.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2042.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2044.26","No alias","Porphyridium purpureum",""(at3g47930 : 432.0) L-Galactono-1,4-lactone dehydrogenase, catalyzes the final step of ascorbate biosynthesis; ""L-galactono-1,4-lactone dehydrogenase"" (GLDH); CONTAINS InterPro DOMAIN/s: D-arabinono-1,4-lactone oxidase (InterPro:IPR007173), FAD-binding, type 2 (InterPro:IPR016166), Galactonolactone dehydrogenase (InterPro:IPR010029), Actin-binding FH2 (InterPro:IPR015425), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: D-arabinono-1,4-lactone oxidase family protein (TAIR:AT5G56490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 864.0) &  (original description: no original description)"","protein_coding"
"evm.model.contig_2046.8","No alias","Porphyridium purpureum","(at5g63060 : 138.0) Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G08690.1); Has 1770 Blast hits to 1770 proteins in 221 species: Archae - 0; Bacteria - 0; Metazoa - 487; Fungi - 470; Plants - 671; Viruses - 0; Other Eukaryotes - 142 (source: NCBI BLink). & (reliability: 276.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2048.13","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2085.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2122.15","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2132.8","No alias","Porphyridium purpureum","(at5g04130 : 677.0) DNA GYRASE B2; FUNCTIONS IN: DNA topoisomerase activity, DNA topoisomerase (ATP-hydrolyzing) activity, DNA binding, ATP binding; INVOLVED IN: DNA topological change, DNA metabolic process; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), DNA topoisomerase, type IIA, subunit B, domain 2 (InterPro:IPR013506), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), ATPase-like, ATP-binding domain (InterPro:IPR003594), DNA topoisomerase, type IIA, subunit B (InterPro:IPR000565), DNA topoisomerase, type IIA, subunit B/N-terminal (InterPro:IPR001241); BEST Arabidopsis thaliana protein match is: DNA GYRASE B1 (TAIR:AT3G10270.1); Has 25944 Blast hits to 25881 proteins in 6578 species: Archae - 105; Bacteria - 19082; Metazoa - 171; Fungi - 228; Plants - 112; Viruses - 77; Other Eukaryotes - 6169 (source: NCBI BLink). & (q5nbj3|gyrb_orysa : 667.0) DNA gyrase subunit B, chloroplast/mitochondrial precursor (EC 5.99.1.3) - Oryza sativa (Rice) & (reliability: 1354.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2144.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2146.25","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding"
"evm.model.contig_2211.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2225.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2269.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2285.5","No alias","Porphyridium purpureum","(at1g31810 : 118.0) Encodes the Type II Arabidopsis formin14.  Interacts with microtubules and microfilaments to regulate cell division.; Formin Homology 14 (AFH14); FUNCTIONS IN: microtubule binding, actin binding, actin filament binding; INVOLVED IN: microsporogenesis; LOCATED IN: preprophase band, phragmoplast, spindle; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Actin-binding FH2 (InterPro:IPR015425), Tensin phosphatase, C2 domain (InterPro:IPR014020); BEST Arabidopsis thaliana protein match is: actin binding (TAIR:AT5G07740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 234.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2295.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2494.33","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2500.14","No alias","Porphyridium purpureum","(at3g19490 : 498.0) member of Na+/H+ antiporter-Putative family; sodium:hydrogen antiporter 1 (NHD1); FUNCTIONS IN: potassium:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: sodium ion transport; LOCATED IN: integral to membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Na+/H+ antiporter NhaD-like (InterPro:IPR018390), Divalent ion symporter (InterPro:IPR004680); BEST Arabidopsis thaliana protein match is: Na+/H+ antiporter 2 (TAIR:AT1G49810.1); Has 2659 Blast hits to 2653 proteins in 794 species: Archae - 96; Bacteria - 1787; Metazoa - 39; Fungi - 48; Plants - 76; Viruses - 0; Other Eukaryotes - 613 (source: NCBI BLink). & (reliability: 996.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3385.20","No alias","Porphyridium purpureum","(at5g50960 : 245.0) Highly similar to Saccharomyces cerevisiae NBP35, locus YGL091C.  Cytosolic protein that homodimerizes and can assemble both 4Fe-4S - type and 2Fe-2S - type clusters on its amino terminal and carboxy therminal respectively. Null mutants are embryo lethal.; nucleotide binding protein 35 (NBP35); CONTAINS InterPro DOMAIN/s: Mrp, conserved site (InterPro:IPR000808), ATPase-like, ParA/MinD (InterPro:IPR019591); BEST Arabidopsis thaliana protein match is: IND1(iron-sulfur protein required for NADH dehydrogenase)-like (TAIR:AT4G19540.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 490.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3419.10","No alias","Porphyridium purpureum","(at1g69220 : 139.0) Encodes a putative serine/threonine kinase (SIK1).; SIK1; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: mitochondrion, chromosome, centromeric region, chromosome, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G53165.2); Has 135073 Blast hits to 131353 proteins in 4820 species: Archae - 174; Bacteria - 17099; Metazoa - 50056; Fungi - 12728; Plants - 33057; Viruses - 559; Other Eukaryotes - 21400 (source: NCBI BLink). & (q5qn75|m2k1_orysa : 116.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 278.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3443.1","No alias","Porphyridium purpureum","(at1g76040 : 107.0) member of Calcium Dependent Protein Kinase; calcium-dependent protein kinase 29 (CPK29); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 21 (TAIR:AT4G04720.1); Has 142530 Blast hits to 132137 proteins in 3984 species: Archae - 133; Bacteria - 14530; Metazoa - 52901; Fungi - 18639; Plants - 31038; Viruses - 504; Other Eukaryotes - 24785 (source: NCBI BLink). & (p28582|cdpk_dauca : 100.0) Calcium-dependent protein kinase (EC 2.7.11.1) (CDPK) - Daucus carota (Carrot) & (reliability: 194.8) &  (original description: no original description)","protein_coding"
"evm.model.contig_3443.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3451.10","No alias","Porphyridium purpureum","(at3g18600 : 515.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G65900.1); Has 44310 Blast hits to 43105 proteins in 3082 species: Archae - 753; Bacteria - 22440; Metazoa - 6214; Fungi - 4682; Plants - 2500; Viruses - 12; Other Eukaryotes - 7709 (source: NCBI BLink). & (p46942|db10_nicsy : 185.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1030.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3494.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3506.4","No alias","Porphyridium purpureum","(at5g48030 : 218.0) encodes a mitochondrially targeted DNAJ protein involved in female gametophyte development.; gametophytic factor 2 (GFA2); FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: in 7 processes; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT1G28210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q04960|dnjh_cucsa : 151.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 436.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3620.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3661.2","No alias","Porphyridium purpureum","(at1g16540 : 136.0) Encodes molybdenum cofactor sulfurase. Involved in Moco biosynthesis. Involved in the conversion of ABA-aldehyde to ABA, the last step of abscisic acid (ABA) biosynthesis. <i>sir</i> loss-of-function mutants are resistant to sirtinol, a modulator of auxin signaling.N terminal domain is similar to bacterial NifS suggesting a common mechanism for sulphur mobilization and transfer.  Also involved in protein import into chloroplasts.; ABA DEFICIENT 3 (ABA3); CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), MOSC, N-terminal beta barrel (InterPro:IPR005303), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Molybdenum cofactor sulfurase, C-terminal (InterPro:IPR005302), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Molybdenum cofactor sulfurase family protein (TAIR:AT1G30910.1); Has 7940 Blast hits to 7904 proteins in 1914 species: Archae - 94; Bacteria - 5396; Metazoa - 390; Fungi - 394; Plants - 292; Viruses - 1; Other Eukaryotes - 1373 (source: NCBI BLink). & (q655r6|mocos_orysa : 125.0) Molybdenum cofactor sulfurase (EC 4.4.-.-) (MoCo sulfurase) (MOS) - Oryza sativa (Rice) & (reliability: 272.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_437.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4406.9","No alias","Porphyridium purpureum","(at5g46840 : 108.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G13224.2); Has 3214 Blast hits to 3009 proteins in 274 species: Archae - 0; Bacteria - 38; Metazoa - 1562; Fungi - 589; Plants - 622; Viruses - 0; Other Eukaryotes - 403 (source: NCBI BLink). & (reliability: 216.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4408.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_441.30","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4413.10","No alias","Porphyridium purpureum","(at3g15870 : 156.0) Fatty acid desaturase family protein; FUNCTIONS IN: oxidoreductase activity, oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water; INVOLVED IN: oxidation reduction, lipid metabolic process; EXPRESSED IN: sepal; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Fatty acid desaturase, type 1, core (InterPro:IPR015876), Fatty acid desaturase, type 1 (InterPro:IPR005804); BEST Arabidopsis thaliana protein match is: fatty acid desaturase 5 (TAIR:AT3G15850.1); Has 3450 Blast hits to 3450 proteins in 826 species: Archae - 0; Bacteria - 1558; Metazoa - 797; Fungi - 221; Plants - 106; Viruses - 4; Other Eukaryotes - 764 (source: NCBI BLink). & (reliability: 312.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4424.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4432.7","No alias","Porphyridium purpureum","(at2g03270 : 345.0) DNA-binding protein, putative; FUNCTIONS IN: hydrolase activity, nucleoside-triphosphatase activity, DNA binding, nucleotide binding, ATP binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), DNA helicase, putative (InterPro:IPR004483), DEAD-like helicase, N-terminal (InterPro:IPR014001); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G35970.1); Has 6736 Blast hits to 5857 proteins in 1106 species: Archae - 209; Bacteria - 2506; Metazoa - 1275; Fungi - 1034; Plants - 659; Viruses - 7; Other Eukaryotes - 1046 (source: NCBI BLink). & (reliability: 690.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_444.5","No alias","Porphyridium purpureum","(at4g15900 : 360.0) Mutations confer hypersensitivity to glucose and sucrose and augments sensitivity to cytokinin, ethylene, ABA and auxin. Encodes a nuclear  WD40 protein that is imported into the nucleus.  Essential for plant innate immunity.  Interacts with MOS4 and AtCDC5. It is also predicted to have two DWD motifs. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase, and may affect the stability of AKIN10.; pleiotropic regulatory locus 1 (PRL1); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G16650.1); Has 84704 Blast hits to 34179 proteins in 878 species: Archae - 64; Bacteria - 9610; Metazoa - 34201; Fungi - 18356; Plants - 10881; Viruses - 0; Other Eukaryotes - 11592 (source: NCBI BLink). & (p93107|pf20_chlre : 101.0) Flagellar WD repeat protein PF20 - Chlamydomonas reinhardtii & (reliability: 708.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4454.1","No alias","Porphyridium purpureum","(at5g58410 : 160.0) HEAT/U-box domain-containing protein; FUNCTIONS IN: binding, zinc ion binding; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Armadillo-type fold (InterPro:IPR016024); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 320.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4456.9","No alias","Porphyridium purpureum","(q6z2l5|kprs1_orysa : 350.0) Ribose-phosphate pyrophosphokinase 1 (EC 2.7.6.1) (Phosphoribosyl pyrophosphate synthetase 1) - Oryza sativa (Rice) & (at2g35390 : 339.0) Phosphoribosyltransferase family protein; FUNCTIONS IN: magnesium ion binding, ribose phosphate diphosphokinase activity; INVOLVED IN: cellular biosynthetic process, nucleotide biosynthetic process, nucleoside metabolic process, ribonucleoside monophosphate biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, LP.10 ten leaves visible, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836), Phosphoribosyl pyrophosphokinase (InterPro:IPR005946), Phosphoribosyl pyrophosphate synthetase, conserved site (InterPro:IPR000842); BEST Arabidopsis thaliana protein match is: phosphoribosyl pyrophosphate (PRPP) synthase 2 (TAIR:AT1G32380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 678.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4458.9","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4474.1","No alias","Porphyridium purpureum","(at3g12810 : 667.0) Encodes a protein similar to ATP-dependent, chromatin-remodeling proteins of the ISWI and SWI2/SNF2 family. Genetic analyses suggest that this gene is involved in multiple flowering pathways. Mutations in PIE1 results in suppression of FLC-mediated delay of flowering and causes early flowering in noninductive photoperiods independently of FLC. PIE1 is required for expression of FLC in the shoot apex but not in the root.Along with ARP6 forms a complex to deposit modified histone H2A.Z at several loci within the genome. This modification alters the expression of the target genes (i.e. FLC, MAF4, MAF6).; PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 (PIE1); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; INVOLVED IN: in 6 processes; LOCATED IN: SWI/SNF complex, cell wall, chromatin remodeling complex; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: HSA (InterPro:IPR006562), HAS subgroup (InterPro:IPR013999), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), SNF2-related (InterPro:IPR000330), MYB-like (InterPro:IPR017877), SANT, DNA-binding (InterPro:IPR001005), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: INO80 ortholog (TAIR:AT3G57300.1); Has 42311 Blast hits to 26312 proteins in 2357 species: Archae - 246; Bacteria - 10217; Metazoa - 11172; Fungi - 7336; Plants - 2916; Viruses - 500; Other Eukaryotes - 9924 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 232.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|68872 : 95.9) no description available & (reliability: 1334.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_448.15","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4501.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_467.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_481.11","No alias","Porphyridium purpureum","(at4g00840 : 131.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT3G60800.1); Has 5117 Blast hits to 5115 proteins in 251 species: Archae - 0; Bacteria - 0; Metazoa - 2189; Fungi - 766; Plants - 830; Viruses - 0; Other Eukaryotes - 1332 (source: NCBI BLink). & (reliability: 260.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_483.3","No alias","Porphyridium purpureum","(at5g18620 : 838.0) chromatin remodeling factor17 (CHR17); FUNCTIONS IN: in 7 functions; INVOLVED IN: ATP-dependent chromatin remodeling, chromatin remodeling; LOCATED IN: nucleus, chromatin remodeling complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, nucleosome remodelling ISWI, HAND domain (InterPro:IPR015194), SANT, eukarya (InterPro:IPR017884), SNF2-related (InterPro:IPR000330), SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), SLIDE (InterPro:IPR015195), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: chromatin-remodeling protein 11 (TAIR:AT3G06400.2); Has 25193 Blast hits to 20371 proteins in 2196 species: Archae - 142; Bacteria - 5974; Metazoa - 6066; Fungi - 4943; Plants - 1903; Viruses - 481; Other Eukaryotes - 5684 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 820.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1664.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_493.15","No alias","Porphyridium purpureum","(at5g17010 : 173.0) Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: vacuolar glucose transporter 1 (TAIR:AT3G03090.1). & (q41144|stc_ricco : 84.7) Sugar carrier protein C - Ricinus communis (Castor bean) & (reliability: 346.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_611.8","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_665.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_779.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_779.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_782.1","No alias","Porphyridium purpureum","(at3g47450 : 109.0) Encodes a protein with similarity to the bacterial YqeH GTPase required for proper ribosome assembly. In Arabidopsis, mutant analyses show that this protein regulates growth and hormonal signaling in plants. It also attenuates oxidative stress and reactive oxygen species (ROS). It also seems to be involved in regulating leaf senescence and cell death. This gene product is also involved in nitric oxide biosynthesis in response to ABA but not exogenous H2O2. This protein also appears to be required for proper plastid biogenesis. Levels of several plastid-localized proteins, including RBCL, ClpP1, and the MEP biosynthesis enzymes DXS and DXR are altered in rif1-1 mutants. This protein was originally characterized as a mitrochondrial-localized nitric oxide synthase, but, the synthase activity was later disproven. In addition, new studies with GFP fusion proteins and chloroplast import assays suggest that this protein is found in chloroplasts.; NO ASSOCIATED 1 (NOA1); FUNCTIONS IN: GTPase activity; INVOLVED IN: in 8 processes; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G57180.1); Has 1589 Blast hits to 1531 proteins in 754 species: Archae - 6; Bacteria - 1199; Metazoa - 159; Fungi - 35; Plants - 109; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (q6ypg5|nos_orysa : 102.0) Putative nitric-oxide synthase (EC 1.14.13.39) - Oryza sativa (Rice) & (reliability: 218.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_856.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000025.28","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000073.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000076.67","No alias","Cyanophora paradoxa","(at1g44110 : 156.0) Cyclin A1;1 (CYCA1;1); CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin (InterPro:IPR006670), G2/mitotic-specific cyclin A (InterPro:IPR015453), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400); BEST Arabidopsis thaliana protein match is: CYCLIN A1;2 (TAIR:AT1G77390.1); Has 4548 Blast hits to 4417 proteins in 376 species: Archae - 0; Bacteria - 4; Metazoa - 1999; Fungi - 561; Plants - 1168; Viruses - 34; Other Eukaryotes - 782 (source: NCBI BLink). & (p30278|ccnb2_medsa : 124.0) G2/mitotic-specific cyclin-2 (B-like cyclin) (CycMs2) (Fragment) - Medicago sativa (Alfalfa) & (reliability: 312.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000093.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000093.41","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000144.165","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000144.171","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000204.25","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000241.179","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000241.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000248.34","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000254.117","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000269.106","No alias","Cyanophora paradoxa","(at5g54670 : 378.0) Encodes a truncated KatC polypeptide (KatC(207-754)), which includes the carboxyl-terminal region of KatC. This was expressed in Escherichia coli and was shown to possess microtubule-stimulated ATPase activity.; kinesin 3 (ATK3); FUNCTIONS IN: microtubule binding, microtubule motor activity, ATPase activity; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: kinesin 2 (TAIR:AT4G27180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o23826|k125_tobac : 196.0) 125 kDa kinesin-related protein - Nicotiana tabacum (Common tobacco) & (reliability: 756.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000269.27","No alias","Cyanophora paradoxa","(p29618|cdc21_orysa : 455.0) Cell division control protein 2 homolog 1 (EC 2.7.11.22) - Oryza sativa (Rice) & (at3g48750 : 446.0) A-type cyclin-dependent kinase. Together with its specific inhibitor,  the Kip-related protein, KRP2 they regulate the mitosis-to-endocycle transition during  leaf development. Dominant negative mutations abolish cell division. Loss of function phenotype has reduced fertility with failure to transmit via pollen. Pollen development is arrested at the  second mitotic division. Expression is regulated by environmental and chemical signals. Part of the promoter is responsible for expression in trichomes. Functions as a positive regulator of cell proliferation during development of the male gametophyte, embryo and endosperm. Phosphorylation of threonine 161 is required for activation of its associated kinase.; cell division control 2 (CDC2); FUNCTIONS IN: protein binding, protein kinase activity, cyclin-dependent protein kinase activity, kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cyclin-dependent kinase B1;2 (TAIR:AT2G38620.2); Has 126125 Blast hits to 124135 proteins in 4221 species: Archae - 112; Bacteria - 14002; Metazoa - 46757; Fungi - 13170; Plants - 30525; Viruses - 484; Other Eukaryotes - 21075 (source: NCBI BLink). & (reliability: 892.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000310.83","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000342.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000383.118","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000402.43","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000403.64","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000404.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000455.19","No alias","Cyanophora paradoxa","(at4g17530 : 219.0) RAB GTPase homolog 1C (RAB1C); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog 1A (TAIR:AT5G47200.1); Has 29496 Blast hits to 29428 proteins in 784 species: Archae - 23; Bacteria - 169; Metazoa - 15486; Fungi - 4134; Plants - 3462; Viruses - 20; Other Eukaryotes - 6202 (source: NCBI BLink). & (q05737|yptm2_maize : 216.0) GTP-binding protein YPTM2 - Zea mays (Maize) & (reliability: 438.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000478.16","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000480.63","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000605.30","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000615.55","No alias","Cyanophora paradoxa","(at5g62410 : 590.0) SMC2-1 (SMC2); structural maintenance of chromosomes 2 (SMC2); FUNCTIONS IN: transporter activity; INVOLVED IN: chromosome organization; LOCATED IN: condensin complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SMCs flexible hinge (InterPro:IPR010935), RecF/RecN/SMC protein, N-terminal (InterPro:IPR003395); BEST Arabidopsis thaliana protein match is: Structural maintenance of chromosomes (SMC) family protein (TAIR:AT3G47460.1); Has 126046 Blast hits to 65003 proteins in 3391 species: Archae - 1784; Bacteria - 23628; Metazoa - 52968; Fungi - 10094; Plants - 6737; Viruses - 431; Other Eukaryotes - 30404 (source: NCBI BLink). & (reliability: 1180.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000663.58","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000704.65","No alias","Cyanophora paradoxa","(at1g61000 : 119.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: mitosis; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Kinetochore protein Nuf2 (InterPro:IPR005549); Has 50972 Blast hits to 29793 proteins in 2070 species: Archae - 902; Bacteria - 7404; Metazoa - 23628; Fungi - 4156; Plants - 2312; Viruses - 158; Other Eukaryotes - 12412 (source: NCBI BLink). & (reliability: 238.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000711.41","No alias","Cyanophora paradoxa","(at5g48600 : 304.0) member of SMC subfamily; structural maintenance of chromosome 3 (SMC3); FUNCTIONS IN: transporter activity, ATP binding; INVOLVED IN: chromosome segregation, chromosome organization; LOCATED IN: chromosome, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SMCs flexible hinge (InterPro:IPR010935), RecF/RecN/SMC protein, N-terminal (InterPro:IPR003395); BEST Arabidopsis thaliana protein match is: structural maintenance of chromosomes 2 (TAIR:AT5G62410.1). & (reliability: 608.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000789.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000836.22","No alias","Cyanophora paradoxa","(at5g18580 : 132.0) fass mutants have aberrant cell shapes due to defects in arrangement of cortical microtubules.  Encodes a protein highly conserved in higher plants and similar in its C-terminal part to B' regulatory subunits of type 2A protein phosphatases.  Interacts with an Arabidopsis type A  subunit of PP2A in the yeast two-hybrid system.; FASS 1 (FASS); CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT5G28850.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 264.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000865.41","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000903.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000944.18","No alias","Cyanophora paradoxa","(p16868|h2b4_volca : 122.0) Histone H2B.4 (H2B-IV) - Volvox carteri & (at3g53650 : 119.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT2G37470.1); Has 3251 Blast hits to 3245 proteins in 328 species: Archae - 0; Bacteria - 2; Metazoa - 2223; Fungi - 201; Plants - 465; Viruses - 0; Other Eukaryotes - 360 (source: NCBI BLink). & (reliability: 234.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001000.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001024.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001030.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001041.20","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001073.12","No alias","Cyanophora paradoxa"," (original description: no original description)","protein_coding"
"evm.model.tig00001093.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001130.30","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001154.37","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001163.2","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001206.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001206.14","No alias","Cyanophora paradoxa","(at5g67270 : 151.0) encodes a homolog of animal microtubule-end-binding protein. There are two other members of this family. EB1 forms foci at regions where the minus ends of microtubules are gathered during mitosis and early cytokinesis.; end binding protein 1C (EB1C); CONTAINS InterPro DOMAIN/s: Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715), EB1, C-terminal (InterPro:IPR004953); BEST Arabidopsis thaliana protein match is: microtubule end binding protein EB1A (TAIR:AT3G47690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 302.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001206.9","No alias","Cyanophora paradoxa","(at1g74150 : 110.0) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Kelch repeat type 1 (InterPro:IPR006652), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 2 (InterPro:IPR011498), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G18610.1); Has 11763 Blast hits to 5823 proteins in 445 species: Archae - 10; Bacteria - 555; Metazoa - 4461; Fungi - 1268; Plants - 2654; Viruses - 19; Other Eukaryotes - 2796 (source: NCBI BLink). & (q39610|dyha_chlre : 89.7) Dynein alpha chain, flagellar outer arm (DHC alpha) - Chlamydomonas reinhardtii & (reliability: 220.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001229.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001229.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001234.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001292.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001388.4","No alias","Cyanophora paradoxa","(p05434|catr_chlre : 177.0) Caltractin (Centrin) (20 kDa calcium-binding protein) - Chlamydomonas reinhardtii & (at3g50360 : 148.0) centrin2 (CEN2); FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: centrin 2 (TAIR:AT4G37010.2); Has 32825 Blast hits to 20606 proteins in 1695 species: Archae - 1; Bacteria - 190; Metazoa - 13563; Fungi - 7187; Plants - 7027; Viruses - 2; Other Eukaryotes - 4855 (source: NCBI BLink). & (reliability: 296.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020510.73","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020537.76","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020539.42","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020544.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020553.136","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020563.196","No alias","Cyanophora paradoxa"," (original description: no original description)","protein_coding"
"evm.model.tig00020610.68","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020610.76","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020629.30","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020629.88","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020629.92","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020684.34","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020710.34","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020734.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020780.5","No alias","Cyanophora paradoxa","(at2g27970 : 128.0) CDK-subunit 2 (CKS2); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity, cyclin-dependent protein kinase activity; INVOLVED IN: cell cycle; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin-dependent kinase, regulatory subunit (InterPro:IPR000789); BEST Arabidopsis thaliana protein match is: cyclin-dependent kinase-subunit 1 (TAIR:AT2G27960.1); Has 657 Blast hits to 657 proteins in 207 species: Archae - 0; Bacteria - 0; Metazoa - 305; Fungi - 139; Plants - 105; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). & (reliability: 256.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020780.71","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020786.5","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020801.34","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020801.75","No alias","Cyanophora paradoxa",""(at2g18040 : 117.0) phosphorylation-specific peptidyl prolyl cis/trans isomerase (PPIase) with specificity for phosphoserine-proline bonds; ""peptidylprolyl cis/trans isomerase, NIMA-interacting 1"" (PIN1AT); FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, PpiC-type (InterPro:IPR000297); BEST Arabidopsis thaliana protein match is: FKBP-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT1G26550.1); Has 6394 Blast hits to 6305 proteins in 1691 species: Archae - 14; Bacteria - 4880; Metazoa - 261; Fungi - 147; Plants - 126; Viruses - 0; Other Eukaryotes - 966 (source: NCBI BLink). & (q94g00|pin1_maldo : 116.0) Peptidyl-prolyl cis-trans isomerase 1 (EC 5.2.1.8) (Rotamase Pin1) (PPIase Pin1) (MdPin1) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 234.0) &  (original description: no original description)"","protein_coding"
"evm.model.tig00020828.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020848.77","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020904.112","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020961.73","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020961.96","No alias","Cyanophora paradoxa","(at5g03730 : 154.0) Homologous to the RAF family of serine/threonine protein kinases. Negative regulator in the ethylene signal transduction pathway. Interacts with the putative ethylene receptors ETR1 and ERS. Constitutively expressed.; CONSTITUTIVE TRIPLE RESPONSE 1 (CTR1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G24480.1); Has 126606 Blast hits to 124675 proteins in 4966 species: Archae - 112; Bacteria - 13843; Metazoa - 48138; Fungi - 11278; Plants - 33351; Viruses - 509; Other Eukaryotes - 19375 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 93.2) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 308.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020965.62","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021035.26","No alias","Cyanophora paradoxa","(at3g07960 : 154.0) Phosphatidylinositol-4-phosphate 5-kinase family protein; FUNCTIONS IN: 1-phosphatidylinositol-4-phosphate 5-kinase activity, phosphatidylinositol phosphate kinase activity, ATP binding; INVOLVED IN: phosphatidylinositol metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, plant (InterPro:IPR017163), MORN motif (InterPro:IPR003409), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: phosphatidylinositol- 4-phosphate 5-kinase 5 (TAIR:AT2G41210.1); Has 28977 Blast hits to 7880 proteins in 615 species: Archae - 0; Bacteria - 4479; Metazoa - 4240; Fungi - 468; Plants - 2497; Viruses - 0; Other Eukaryotes - 17293 (source: NCBI BLink). & (q6ex42|pi5k1_orysa : 145.0) Phosphatidylinositol-4-phosphate 5-kinase 1 precursor (EC 2.7.1.68) (1-phosphatidylinositol-4-phosphate kinase) (PIP5K) (PtdIns(4)P-5-kinase) (Diphosphoinositide kinase) - Oryza sativa (Rice) & (reliability: 308.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021037.55","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021037.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021070.118","No alias","Cyanophora paradoxa","(at3g57060 : 214.0) binding; FUNCTIONS IN: binding; INVOLVED IN: mitosis, chromosome condensation; LOCATED IN: nucleus, condensin complex; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Non-SMC condensin subunit, XCAP-D2/Cnd1 (InterPro:IPR007673), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: binding (TAIR:AT4G15890.1). & (reliability: 428.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021070.71","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021127.49","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021314.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021319.60","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021352.44","No alias","Cyanophora paradoxa","(at1g22300 : 279.0) Encodes a 14-3-3 protein. This protein is reported to interact with the BZR1 transcription factor involved in brassinosteroid signaling and may affect the nucleocytoplasmic shuttling of BZR1.; general regulatory factor 10 (GRF10); FUNCTIONS IN: protein phosphorylated amino acid binding, ATP binding; INVOLVED IN: brassinosteroid mediated signaling pathway; LOCATED IN: mitochondrion, chloroplast stroma, plasma membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: 14-3-3 protein (InterPro:IPR000308); BEST Arabidopsis thaliana protein match is: general regulatory factor 11 (TAIR:AT1G34760.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q41418|14331_soltu : 273.0) 14-3-3-like protein - Solanum tuberosum (Potato) & (reliability: 558.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021357.30","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021432.34","No alias","Cyanophora paradoxa","(at3g19240 : 88.2) Vacuolar import/degradation, Vid27-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Vacuolar import/degradation, Vid27-related (InterPro:IPR013863); BEST Arabidopsis thaliana protein match is: Vacuolar import/degradation, Vid27-related protein (TAIR:AT4G33400.1); Has 312 Blast hits to 307 proteins in 136 species: Archae - 0; Bacteria - 1; Metazoa - 11; Fungi - 168; Plants - 82; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (reliability: 176.4) &  (original description: no original description)","protein_coding"
"evm.model.tig00021432.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021434.59","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021493.23","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021501.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021531.17","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021582.41","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021616.22","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021621.13","No alias","Cyanophora paradoxa","(at3g54630 : 80.1) CONTAINS InterPro DOMAIN/s: Kinetochore protein Ndc80 (InterPro:IPR005550); Has 24780 Blast hits to 15608 proteins in 1321 species: Archae - 545; Bacteria - 2969; Metazoa - 12597; Fungi - 2181; Plants - 1581; Viruses - 39; Other Eukaryotes - 4868 (source: NCBI BLink). & (reliability: 160.2) &  (original description: no original description)","protein_coding"
"evm.model.tig00021621.14","No alias","Cyanophora paradoxa","(at3g55000 : 86.3) Encodes a protein of unknown function that is involved in cortical microtubule organization. Mutants exhibit abnormal cell growth and patterns of division. TON1A can functionally complement TON1B and their roles appear to be redundant in plants. Encodes a novel protein that is similar to human FOP and OFD1 centrosomal proteins. Localizes to the preprophase band, cytoplasm and cell cortex where it is probably associated with the cortical cytoskeleton. TON1A associates with plant centrins CEN1 and CEN2.; TONNEAU 1A (TON1A); INVOLVED IN: microtubule cytoskeleton organization; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: FGFR1 oncogene partner (FOP), N-terminal dimerisation domain (InterPro:IPR018993), LisH dimerisation motif (InterPro:IPR006594); BEST Arabidopsis thaliana protein match is: tonneau 1b (TON1b) (TAIR:AT3G55005.1); Has 229 Blast hits to 226 proteins in 73 species: Archae - 0; Bacteria - 3; Metazoa - 122; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (reliability: 172.6) &  (original description: no original description)","protein_coding"
"evm.model.tig00021680.33","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021720.13","No alias","Cyanophora paradoxa","(p05434|catr_chlre : 256.0) Caltractin (Centrin) (20 kDa calcium-binding protein) - Chlamydomonas reinhardtii & (at3g50360 : 203.0) centrin2 (CEN2); FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: centrin 2 (TAIR:AT4G37010.2); Has 32825 Blast hits to 20606 proteins in 1695 species: Archae - 1; Bacteria - 190; Metazoa - 13563; Fungi - 7187; Plants - 7027; Viruses - 2; Other Eukaryotes - 4855 (source: NCBI BLink). & (reliability: 406.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00022075.66","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00022075.88","No alias","Cyanophora paradoxa","(at2g25880 : 270.0) Encodes a member of a family of Ser/Thr kinases whose activities peak during cell division.  Transcripts are abundant in tissues rich in dividing cells like roots and flowers but are low or absent in fully expanded leaves and stems.  In interphase cells, the protein is predominantly nuclear.  During mitosis, the protein associates with plant-specific cytoskeletal structures (preprophase band, phragmoplast, nascent cell plate) that are necessary for cytokinesis as well as with the microtubule spindle.; ataurora2 (AUR2); CONTAINS InterPro DOMAIN/s: Spindle assembly checkpoint kinase (InterPro:IPR020663), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: ataurora1 (TAIR:AT4G32830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 138.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 538.0) &  (original description: no original description)","protein_coding"
"Glyma.01G030800","No alias","Glycine max","Nucleic acid-binding, OB-fold-like protein","protein_coding"
"Glyma.01G069300","No alias","Glycine max","basic leucine-zipper 42","protein_coding"
"Glyma.01G075300","No alias","Glycine max","Translation elongation factor EFG/EF2 protein","protein_coding"
"Glyma.01G144300","No alias","Glycine max","EF hand calcium-binding protein family","protein_coding"
"Glyma.01G182000","No alias","Glycine max","extra-large G-protein 1","protein_coding"
"Glyma.01G203200","No alias","Glycine max","Protein of unknown function (DUF581)","protein_coding"
"Glyma.02G002300","No alias","Glycine max","Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein","protein_coding"
"Glyma.02G035400","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.02G052300","No alias","Glycine max","alpha/beta-Hydrolases superfamily protein","protein_coding"
"Glyma.02G095000","No alias","Glycine max","ribosomal protein L23AB","protein_coding"
"Glyma.02G116000","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Glyma.02G145600","No alias","Glycine max","DNAse I-like superfamily protein","protein_coding"
"Glyma.02G151500","No alias","Glycine max","transducin family protein / WD-40 repeat family protein","protein_coding"
"Glyma.02G220000","No alias","Glycine max","Ribosomal protein L16p/L10e family protein","protein_coding"
"Glyma.02G247400","No alias","Glycine max","AAR2 protein family","protein_coding"
"Glyma.02G266800","No alias","Glycine max","centromere/kinetochore protein, putative (ZW10)","protein_coding"
"Glyma.03G026900","No alias","Glycine max","SEC6","protein_coding"
"Glyma.03G039901","No alias","Glycine max","tetratricopeptide repeat (TPR)-containing protein","protein_coding"
"Glyma.03G159900","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.03G170900","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.04G039100","No alias","Glycine max","Polyketide cyclase / dehydrase and lipid transport protein","protein_coding"
"Glyma.04G077000","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.04G119600","No alias","Glycine max","SKU5 similar 1","protein_coding"
"Glyma.04G149700","No alias","Glycine max","ARM repeat superfamily protein","protein_coding"
"Glyma.04G187500","No alias","Glycine max","Ribosomal protein L18e/L15 superfamily protein","protein_coding"
"Glyma.04G226800","No alias","Glycine max","Calcium-binding endonuclease/exonuclease/phosphatase family","protein_coding"
"Glyma.04G248700","No alias","Glycine max","Eukaryotic aspartyl protease family protein","protein_coding"
"Glyma.04G252900","No alias","Glycine max","holocarboxylase synthase 1","protein_coding"
"Glyma.05G013500","No alias","Glycine max","Transcription factor TFIIE, alpha subunit","protein_coding"
"Glyma.05G016300","No alias","Glycine max","minichromosome instability 12 (mis12)-like","protein_coding"
"Glyma.05G021400","No alias","Glycine max","histone deacetylase 5","protein_coding"
"Glyma.05G088300","No alias","Glycine max","DNA-binding storekeeper protein-related transcriptional regulator","protein_coding"
"Glyma.05G091150","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.05G131400","No alias","Glycine max","PYRIMIDINE B","protein_coding"
"Glyma.05G132500","No alias","Glycine max","Ribosomal protein L35Ae family protein","protein_coding"
"Glyma.05G180400","No alias","Glycine max","DNAse I-like superfamily protein","protein_coding"
"Glyma.05G212300","No alias","Glycine max","Protein of unknown function (DUF567)","protein_coding"
"Glyma.06G016200","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.06G022700","No alias","Glycine max","SGNH hydrolase-type esterase superfamily protein","protein_coding"
"Glyma.06G131900","No alias","Glycine max","cytochrome B5 isoform A","protein_coding"
"Glyma.06G158532","No alias","Glycine max","Regulator of chromosome condensation (RCC1) family protein","protein_coding"
"Glyma.06G187900","No alias","Glycine max","Protein of unknown function, DUF593","protein_coding"
"Glyma.06G238700","No alias","Glycine max","phytosylfokine-alpha receptor 2","protein_coding"
"Glyma.06G268600","No alias","Glycine max","disease resistance protein (TIR-NBS-LRR class), putative","protein_coding"
"Glyma.06G304100","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.07G000700","No alias","Glycine max","HXXXD-type acyl-transferase family protein","protein_coding"
"Glyma.07G023900","No alias","Glycine max","Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein","protein_coding"
"Glyma.07G054000","No alias","Glycine max","myb domain protein 111","protein_coding"
"Glyma.07G066700","No alias","Glycine max","coenzyme Q biosynthesis Coq4 family protein / ubiquinone biosynthesis Coq4 family protein","protein_coding"
"Glyma.07G094051","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.07G198600","No alias","Glycine max","Ribosomal protein S6e","protein_coding"
"Glyma.07G227100","No alias","Glycine max","Plant protein of unknown function (DUF863)","protein_coding"
"Glyma.07G245500","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Glyma.08G058600","No alias","Glycine max","Calmodulin-binding protein","protein_coding"
"Glyma.08G102800","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.08G127700","No alias","Glycine max","Phosphatidylinositol-4-phosphate 5-kinase family protein","protein_coding"
"Glyma.08G144367","No alias","Glycine max","Acyl-CoA N-acyltransferases (NAT) superfamily protein","protein_coding"
"Glyma.08G184300","No alias","Glycine max","Ribosomal protein L10 family protein","protein_coding"
"Glyma.08G332500","No alias","Glycine max","UDP-Glycosyltransferase superfamily protein","protein_coding"
"Glyma.08G354800","No alias","Glycine max","EamA-like transporter family","protein_coding"
"Glyma.09G042700","No alias","Glycine max","MATE efflux family protein","protein_coding"
"Glyma.09G092700","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.09G125400","No alias","Glycine max","RING/FYVE/PHD zinc finger superfamily protein","protein_coding"
"Glyma.09G173700","No alias","Glycine max","Zinc-finger domain of monoamine-oxidase A repressor R1","protein_coding"
"Glyma.09G186800","No alias","Glycine max","C-8,7 sterol isomerase","protein_coding"
"Glyma.09G216700","No alias","Glycine max","DNAse I-like superfamily protein","protein_coding"
"Glyma.09G248700","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.10G022000","No alias","Glycine max","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"Glyma.10G032800","No alias","Glycine max","Signal recognition particle, SRP9/SRP14 subunit","protein_coding"
"Glyma.10G136700","No alias","Glycine max","F-box/RNI-like/FBD-like domains-containing protein","protein_coding"
"Glyma.10G150800","No alias","Glycine max","ribosomal protein L18","protein_coding"
"Glyma.11G004000","No alias","Glycine max","kinase associated protein phosphatase","protein_coding"
"Glyma.11G008000","No alias","Glycine max","Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein","protein_coding"
"Glyma.11G023500","No alias","Glycine max","bromo-adjacent homology (BAH) domain-containing protein","protein_coding"
"Glyma.11G045900","No alias","Glycine max","basic leucine-zipper 5","protein_coding"
"Glyma.11G048432","No alias","Glycine max","ARM repeat superfamily protein","protein_coding"
"Glyma.11G072300","No alias","Glycine max","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding"
"Glyma.11G109202","No alias","Glycine max","anaphase-promoting complex subunit 8","protein_coding"
"Glyma.11G119100","No alias","Glycine max","unknown seed protein like 1","protein_coding"
"Glyma.11G125567","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.11G141600","No alias","Glycine max","Histone superfamily protein","protein_coding"
"Glyma.11G154100","No alias","Glycine max","Calcium-dependent ARF-type GTPase activating protein family","protein_coding"
"Glyma.11G171004","No alias","Glycine max","cleavage and polyadenylation specificity factor 100","protein_coding"
"Glyma.11G177900","No alias","Glycine max","Histone superfamily protein","protein_coding"
"Glyma.11G235800","No alias","Glycine max","gamma-glutamyl transpeptidase 1","protein_coding"
"Glyma.11G256600","No alias","Glycine max","ubiquitin-specific protease 2","protein_coding"
"Glyma.12G030800","No alias","Glycine max","glycine-rich protein 2B","protein_coding"
"Glyma.12G066700","No alias","Glycine max","ribosomal protein L23AB","protein_coding"
"Glyma.12G164300","No alias","Glycine max","Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein","protein_coding"
"Glyma.12G182300","No alias","Glycine max","Stress responsive A/B Barrel Domain","protein_coding"
"Glyma.12G216000","No alias","Glycine max","Protein kinase superfamily protein","protein_coding"
"Glyma.13G025800","No alias","Glycine max","Thymidine kinase","protein_coding"
"Glyma.13G032700","No alias","Glycine max","Protein kinase superfamily protein","protein_coding"
"Glyma.13G177800","No alias","Glycine max","Ribosomal protein S6e","protein_coding"
"Glyma.13G182100","No alias","Glycine max","alpha/beta-Hydrolases superfamily protein","protein_coding"
"Glyma.13G198800","No alias","Glycine max","Protein with RING/U-box and TRAF-like domains","protein_coding"
"Glyma.13G272700","No alias","Glycine max","RING/U-box superfamily protein","protein_coding"
"Glyma.13G314800","No alias","Glycine max","Leucine-rich repeat (LRR) family protein","protein_coding"
"Glyma.13G326000","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.13G356400","No alias","Glycine max","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"Glyma.14G050700","No alias","Glycine max","centromere/kinetochore protein, putative (ZW10)","protein_coding"
"Glyma.14G123400","No alias","Glycine max","Acyl-CoA N-acyltransferases (NAT) superfamily protein","protein_coding"
"Glyma.14G182900","No alias","Glycine max","HVA22 homologue A","protein_coding"
"Glyma.14G208600","No alias","Glycine max","Ribosomal protein S26e family protein","protein_coding"
"Glyma.14G218300","No alias","Glycine max","Pyridine nucleotide-disulphide oxidoreductase family protein","protein_coding"
"Glyma.15G029700","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.15G044000","No alias","Glycine max","hydrolase family protein / HAD-superfamily protein","protein_coding"
"Glyma.15G054600","No alias","Glycine max","EXORDIUM like 2","protein_coding"
"Glyma.15G063300","No alias","Glycine max","DNA-binding storekeeper protein-related transcriptional regulator","protein_coding"
"Glyma.15G075600","No alias","Glycine max","Ribosomal protein S6e","protein_coding"
"Glyma.15G083700","No alias","Glycine max","Protein of unknown function (DUF1637)","protein_coding"
"Glyma.15G114900","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.15G165600","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.15G179300","No alias","Glycine max","Leucine-rich repeat protein kinase family protein","protein_coding"
"Glyma.16G023300","No alias","Glycine max","transducin family protein / WD-40 repeat family protein","protein_coding"
"Glyma.16G068100","No alias","Glycine max","cytochrome P450, family 724, subfamily A, polypeptide 1","protein_coding"
"Glyma.16G095900","No alias","Glycine max","Granulin repeat cysteine protease family protein","protein_coding"
"Glyma.16G105000","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.17G008400","No alias","Glycine max","ubiquitin protein ligase 5","protein_coding"
"Glyma.17G083800","No alias","Glycine max","minichromosome instability 12 (mis12)-like","protein_coding"
"Glyma.17G105600","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.17G111100","No alias","Glycine max","Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein","protein_coding"
"Glyma.17G188800","No alias","Glycine max","Protein of unknown function, DUF599","protein_coding"
"Glyma.17G196500","No alias","Glycine max","DNA topoisomerase, type IA, core","protein_coding"
"Glyma.17G218500","No alias","Glycine max","Concanavalin A-like lectin protein kinase family protein","protein_coding"
"Glyma.17G229700","No alias","Glycine max","K+ efflux antiporter 6","protein_coding"
"Glyma.17G232210","No alias","Glycine max","Homeobox-leucine zipper protein family","protein_coding"
"Glyma.18G035800","No alias","Glycine max","sec7 domain-containing protein","protein_coding"
"Glyma.18G049100","No alias","Glycine max","FRAGILE HISTIDINE TRIAD","protein_coding"
"Glyma.18G094900","No alias","Glycine max","Pyridoxal phosphate (PLP)-dependent transferases superfamily protein","protein_coding"
"Glyma.18G234400","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.18G246600","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Glyma.18G254500","No alias","Glycine max","Leucine-rich repeat receptor-like protein kinase family protein","protein_coding"
"Glyma.18G295000","No alias","Glycine max","ortholog of maize chloroplast splicing factor CRS1","protein_coding"
"Glyma.19G036600","No alias","Glycine max","Protein kinase superfamily protein","protein_coding"
"Glyma.19G076000","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.19G170600","No alias","Glycine max","pfkB-like carbohydrate kinase family protein","protein_coding"
"Glyma.19G240800","No alias","Glycine max","cytochrome P450, family 78, subfamily A, polypeptide 5","protein_coding"
"Glyma.20G076700","No alias","Glycine max","RING/U-box superfamily protein","protein_coding"
"Glyma.20G095900","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.20G102100","No alias","Glycine max","GRAM domain-containing protein / ABA-responsive protein-related","protein_coding"
"Glyma.20G135700","No alias","Glycine max","phytosulfokine 4 precursor","protein_coding"
"Glyma.20G173300","No alias","Glycine max","Trm112p-like protein","protein_coding"
"GRMZM2G004949","No alias","Zea mays","Arabidopsis Inositol phosphorylceramide synthase 1","protein_coding"
"GRMZM2G018099","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G023755","No alias","Zea mays","RING/FYVE/PHD zinc finger superfamily protein","protein_coding"
"GRMZM2G037655","No alias","Zea mays","ER lumen protein retaining receptor family protein","protein_coding"
"GRMZM2G042323","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G044358","No alias","Zea mays","gibberellin 3-oxidase 4","protein_coding"
"GRMZM2G045452","No alias","Zea mays","vacuolar protein sorting 41","protein_coding"
"GRMZM2G047777","No alias","Zea mays","F-box family protein","protein_coding"
"GRMZM2G059785","No alias","Zea mays","expansin B2","protein_coding"
"GRMZM2G063756","No alias","Zea mays","cytochrome P450, family 71, subfamily A, polypeptide 25","protein_coding"
"GRMZM2G065154","No alias","Zea mays","MATE efflux family protein","protein_coding"
"GRMZM2G084496","No alias","Zea mays","terpene synthase 21","protein_coding"
"GRMZM2G089598","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G089936","No alias","Zea mays","ATP binding;nucleic acid binding;helicases","protein_coding"
"GRMZM2G094602","No alias","Zea mays","Zinc finger (C3HC4-type RING finger) family protein","protein_coding"
"GRMZM2G100484","No alias","Zea mays","Xanthine/uracil permease family protein","protein_coding"
"GRMZM2G104092","No alias","Zea mays","cellulose synthase 1","protein_coding"
"GRMZM2G111666","No alias","Zea mays","basic helix-loop-helix (bHLH) DNA-binding superfamily protein","protein_coding"
"GRMZM2G121826","No alias","Zea mays","Protein kinase protein with tetratricopeptide repeat domain","protein_coding"
"GRMZM2G123094","No alias","Zea mays","C2H2-like zinc finger protein","protein_coding"
"GRMZM2G123843","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G126913","No alias","Zea mays","Cytosol aminopeptidase family protein","protein_coding"
"GRMZM2G131946","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G135387","No alias","Zea mays","cytochrome P450, family 71, subfamily B, polypeptide 34","protein_coding"
"GRMZM2G136465","No alias","Zea mays","hydroxy methylglutaryl CoA reductase 1","protein_coding"
"GRMZM2G140996","No alias","Zea mays","O-methyltransferase family protein","protein_coding"
"GRMZM2G141864","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G142437","No alias","Zea mays","D-alanine--D-alanine ligase family","protein_coding"
"GRMZM2G148374","No alias","Zea mays","H(+)-ATPase 8","protein_coding"
"GRMZM2G148702","No alias","Zea mays","Leucine-rich receptor-like protein kinase family protein","protein_coding"
"GRMZM2G150952","No alias","Zea mays","OBP3-responsive gene 1","protein_coding"
"GRMZM2G163761","No alias","Zea mays","BEL1-like homeodomain 11","protein_coding"
"GRMZM2G167220","No alias","Zea mays","cytokinin oxidase/dehydrogenase 1","protein_coding"
"GRMZM2G169121","No alias","Zea mays","Protein of unknown function (DUF789)","protein_coding"
"GRMZM2G171781","No alias","Zea mays","myb domain protein 61","protein_coding"
"GRMZM2G172664","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G173660","No alias","Zea mays","minichromosome instability 12 (mis12)-like","protein_coding"
"GRMZM2G175082","No alias","Zea mays","hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase","protein_coding"
"GRMZM2G175250","No alias","Zea mays","cytochrome P450, family 709, subfamily B, polypeptide 2","protein_coding"
"GRMZM2G314110","No alias","Zea mays","Protein of unknown function (DUF567)","protein_coding"
"GRMZM2G316778","No alias","Zea mays","Nucleotide-diphospho-sugar transferases superfamily protein","protein_coding"
"GRMZM2G328780","No alias","Zea mays","Flavin-binding monooxygenase family protein","protein_coding"
"GRMZM2G328795","No alias","Zea mays","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"GRMZM2G333619","No alias","Zea mays","cellulose synthase 1","protein_coding"
"GRMZM2G339122","No alias","Zea mays","expansin A1","protein_coding"
"GRMZM2G341934","No alias","Zea mays","Peroxidase superfamily protein","protein_coding"
"GRMZM2G347027","No alias","Zea mays","co-factor for nitrate, reductase and xanthine dehydrogenase 5","protein_coding"
"GRMZM2G366698","No alias","Zea mays","Endonuclease/exonuclease/phosphatase family protein","protein_coding"
"GRMZM2G369018","No alias","Zea mays","Brassinosteroid signalling positive regulator (BZR1) family protein","protein_coding"
"GRMZM2G369799","No alias","Zea mays","myb domain protein 73","protein_coding"
"GRMZM2G376085","No alias","Zea mays","ARM repeat superfamily protein","protein_coding"
"GRMZM2G378949","No alias","Zea mays","CDPK-related kinase 3","protein_coding"
"GRMZM2G413055","No alias","Zea mays","adenosine kinase","protein_coding"
"GRMZM2G427672","No alias","Zea mays","RNA-binding KH domain-containing protein","protein_coding"
"GRMZM2G460096","No alias","Zea mays","cytochrome P450, family 94, subfamily B, polypeptide 3","protein_coding"
"GRMZM2G462417","No alias","Zea mays","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"GRMZM2G538218","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM5G802646","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM5G823750","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM5G823891","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM5G847216","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM5G860905","No alias","Zea mays","structural molecules","protein_coding"
"GRMZM5G873277","No alias","Zea mays","Protein kinase superfamily protein","protein_coding"
"GRMZM5G878541","No alias","Zea mays","WEE1 kinase homolog","protein_coding"
"GRMZM5G894568","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM6G570512","No alias","Zea mays","RNA-binding (RRM/RBD/RNP motifs) family protein","protein_coding"
"HORVU0Hr1G010590.6","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G046020.1","No alias","Hordeum vulgare","DDX6-type mRNA helicase *(RH12/RH8)","protein_coding"
"HORVU1Hr1G051190.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G091420.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G073110.11","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G084740.2","No alias","Hordeum vulgare","nucleotide sugar transporter *(UTR6)","protein_coding"
"HORVU2Hr1G096070.9","No alias","Hordeum vulgare","regulatory protein *(CYCB) of cell cycle","protein_coding"
"HORVU3Hr1G052650.9","No alias","Hordeum vulgare","PERK-related protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"HORVU3Hr1G075220.5","No alias","Hordeum vulgare","deubiquitinase *(UBP12-13) & deubiquitinase *(UBP12-13)","protein_coding"
"HORVU3Hr1G075250.1","No alias","Hordeum vulgare","deubiquitinase *(UBP12-13) & deubiquitinase *(UBP12-13)","protein_coding"
"HORVU3Hr1G095420.3","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G029940.6","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G017890.8","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G076560.1","No alias","Hordeum vulgare","RanGDP-specific nuclear import factor *(NTF2)","protein_coding"
"HORVU5Hr1G103600.19","No alias","Hordeum vulgare","component *(TRS85) of TRAPP-III complex-specific components","protein_coding"
"HORVU5Hr1G115240.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G119480.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G021170.1","No alias","Hordeum vulgare","accessory component *(MIDGET) of meiotic topoisomerase-VI complex","protein_coding"
"HORVU6Hr1G055740.1","No alias","Hordeum vulgare","FRS/FRF-type transcription factor","protein_coding"
"HORVU7Hr1G029460.4","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G075150.4","No alias","Hordeum vulgare","component *(CSN3) of COP9 signalosome complex","protein_coding"
"HORVU7Hr1G091900.1","No alias","Hordeum vulgare","component *(MIP1) of DSL1 (Depends-on-SLY1) complex","protein_coding"
"Kfl00001_0140","kfl00001_0140_v1.1","Klebsormidium nitens","(at1g70330 : 164.0) encodes an adenosine transporter that catalyze a proton-dependent adenosine transport.; equilibrative nucleotide transporter 1 (ENT1); FUNCTIONS IN: nucleoside transmembrane transporter activity, against a concentration gradient, nucleoside transmembrane transporter activity; INVOLVED IN: transport; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Delayed-early response protein/equilibrative nucleoside transporter (InterPro:IPR002259); BEST Arabidopsis thaliana protein match is: Nucleoside transporter family protein (TAIR:AT1G02630.1); Has 1134 Blast hits to 1048 proteins in 199 species: Archae - 0; Bacteria - 3; Metazoa - 554; Fungi - 118; Plants - 203; Viruses - 3; Other Eukaryotes - 253 (source: NCBI BLink). & (reliability: 328.0) &  (original description: no original description)","protein_coding"
"Kfl00001_0600","kfl00001_0600_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00002_0340","kfl00002_0340_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00003_0770","kfl00003_0770_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00004_0160","kfl00004_0160_v1.1","Klebsormidium nitens","(at3g54650 : 149.0) FBL17; FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: generative cell mitosis, seed development, embryo development, ubiquitin-dependent protein catabolic process, pollen development; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810); Has 1738 Blast hits to 1195 proteins in 149 species: Archae - 0; Bacteria - 27; Metazoa - 733; Fungi - 89; Plants - 663; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink). & (reliability: 298.0) &  (original description: no original description)","protein_coding"
"Kfl00009_0580","kfl00009_0580_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00019_0370","kfl00019_0370_v1.1","Klebsormidium nitens","(at2g45280 : 300.0) Encodes a protein similar to RAD51C involved in double stranded break repair via homologous recombination. Sensitive to DSB induced by Mitomycin C and gamma irradiation, interacts with Atxrcc3 in yeast two-hybrid assay.  Required for female meiosis but not critical for mitosis under normal conditions.; RAS associated with diabetes protein 51C (RAD51C); CONTAINS InterPro DOMAIN/s: DNA recombination/repair protein RecA/RadB, ATP-binding domain (InterPro:IPR020588), DNA recombination and repair protein, RecA-like (InterPro:IPR016467), DNA recombination and repair protein Rad51, C-terminal (InterPro:IPR013632); BEST Arabidopsis thaliana protein match is: DNA repair (Rad51) family protein (TAIR:AT3G22880.1). & (p37384|dmc1_lillo : 110.0) Meiotic recombination protein DMC1 homolog - Lilium longiflorum (Trumpet lily) & (reliability: 600.0) &  (original description: no original description)","protein_coding"
"Kfl00022_0250","kfl00022_0250_v1.1","Klebsormidium nitens","(at1g21690 : 472.0) embryo defective 1968 (EMB1968); FUNCTIONS IN: in 6 functions; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: DNA replication factor C complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921), Replication factor C (InterPro:IPR013748); BEST Arabidopsis thaliana protein match is: replication factor C 2 (TAIR:AT1G63160.1). & (reliability: 944.0) &  (original description: no original description)","protein_coding"
"Kfl00024_0170","kfl00024_0170_v1.1","Klebsormidium nitens","(at1g52920 : 342.0) Encodes a plasma membraneñlocalized ABA receptor, which interacts with  the G&#945;&#946;&#947; complex. It has been postulated that the binding of ABA to GCR2 results in the release of the G protein and dissociation of the heterotrimeric complex into G&#945; and the G&#946;&#947; dimer to activate downstream ABA effectors and to trigger the ABA responses.; G protein coupled receptor (GPCR); CONTAINS InterPro DOMAIN/s: LanC-like protein, eukaryotic (InterPro:IPR020464), Six-hairpin glycosidase-like (InterPro:IPR008928), Lanthionine synthetase C-like (InterPro:IPR007822); BEST Arabidopsis thaliana protein match is: GCR2-like 2 (TAIR:AT2G20770.1); Has 681 Blast hits to 670 proteins in 211 species: Archae - 0; Bacteria - 184; Metazoa - 280; Fungi - 66; Plants - 112; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (reliability: 684.0) &  (original description: no original description)","protein_coding"
"Kfl00028_0260","kfl00028_0260_v1.1","Klebsormidium nitens","(at2g44580 : 266.0) zinc ion binding; CONTAINS InterPro DOMAIN/s: Sister chromatid cohesion protein DCC1 (InterPro:IPR019128); Has 214 Blast hits to 211 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 115; Fungi - 49; Plants - 36; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 532.0) &  (original description: no original description)","protein_coding"
"Kfl00029_0270","kfl00029_0270_v1.1","Klebsormidium nitens","(at5g44635 : 779.0) MINICHROMOSOME MAINTENANCE 6 (MCM6); FUNCTIONS IN: DNA-dependent ATPase activity, DNA binding, ATP binding; INVOLVED IN: cell proliferation, DNA-dependent DNA replication initiation, DNA unwinding involved in replication; LOCATED IN: nuclear chromatin; EXPRESSED IN: shoot apex; EXPRESSED DURING: IL.00 inflorescence just visible; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 6 (InterPro:IPR008049); BEST Arabidopsis thaliana protein match is: Minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT2G16440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q43704|mcm3_maize : 281.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 1558.0) &  (original description: no original description)","protein_coding"
"Kfl00030_0270","kfl00030_0270_v1.1","Klebsormidium nitens","(at5g66750 : 640.0) Protein is similar to SWI2/SNF2 chromatin remodeling proteins. DDM1 is appears to act as a chromatin-remodeling ATPase involved in cytosine methylation in CG and non-CG contexts. Involved in gene silencing and maintenance of DNA methylation and histone methylation. Hypomethylation of many genomic regions occurs in ddm1 mutants, and can cause several phenotypic abnormalities, but some loci, such as BONSAI (At1g73177) can be hypermethylated in ddm1 mutants after several generations, leading to different phenotypes. DDM1 might be involved in establishing a heterochromain boundary. A line expressing an RNAi targeted against DDM1  shows some resistance to agrobacterium-mediated root transformation.; chromatin remodeling 1 (CHR1); FUNCTIONS IN: helicase activity, ATPase activity; INVOLVED IN: methylation-dependent chromatin silencing, DNA mediated transformation, transposition, RNA-mediated; LOCATED IN: nucleosome; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor17 (TAIR:AT5G18620.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 439.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1280.0) &  (original description: no original description)","protein_coding"
"Kfl00031_0280","kfl00031_0280_v1.1","Klebsormidium nitens","(at5g26680 : 491.0) 5'-3' exonuclease family protein; FUNCTIONS IN: 5'-3' exonuclease activity, DNA binding, catalytic activity, nuclease activity; INVOLVED IN: DNA repair; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: XPG conserved site (InterPro:IPR019974), XPG N-terminal (InterPro:IPR006085), DNA repair protein (XPGC)/yeast Rad (InterPro:IPR006084), 5'-3' exonuclease, N-terminal (InterPro:IPR002421), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), Helix-hairpin-helix motif, class 2 (InterPro:IPR008918), XPG/RAD2 endonuclease (InterPro:IPR006086); BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT1G29630.2); Has 3563 Blast hits to 3243 proteins in 839 species: Archae - 284; Bacteria - 855; Metazoa - 643; Fungi - 727; Plants - 266; Viruses - 42; Other Eukaryotes - 746 (source: NCBI BLink). & (q9sxq6|fen1a_orysa : 477.0) Flap endonuclease 1a (EC 3.1.-.-) (OsFEN-1a) - Oryza sativa (Rice) & (reliability: 982.0) &  (original description: no original description)","protein_coding"
"Kfl00031_0330","kfl00031_0330_v1.1","Klebsormidium nitens","(at5g59960 : 289.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 578.0) &  (original description: no original description)","protein_coding"
"Kfl00033_0310","kfl00033_0310_v1.1","Klebsormidium nitens","(at2g16440 : 825.0) MINICHROMOSOME MAINTENANCE 4 (MCM4); FUNCTIONS IN: nucleoside-triphosphatase activity, DNA-dependent ATPase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: cell proliferation, DNA-dependent DNA replication initiation, DNA unwinding involved in replication; LOCATED IN: nuclear chromatin; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), ATPase, AAA+ type, core (InterPro:IPR003593), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 4 (InterPro:IPR008047); BEST Arabidopsis thaliana protein match is: minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT5G44635.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q43704|mcm3_maize : 290.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 1650.0) &  (original description: no original description)","protein_coding"
"Kfl00035_0100","kfl00035_0100_v1.1","Klebsormidium nitens","(q8vyx2|akt1_orysa : 116.0) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (at4g22200 : 110.0) Encodes AKT2, a photosynthate- and light-dependent inward rectifying potassium channel with unique gating properties that are regulated by phosphorylation.  Expressed in guard cell protoplasts and in the phloem and xylem of aerial portions of the plant.  The channel can coassemble with another K+ channel, KAT1, in vitro.  In guard cells, AKT2/3 is responsible for the Ca2+ sensitivity of the K+ uptake channel.  In the phloem, it regulates the sucrose/H+ symporters via the phloem potential.  AKT2 belongs to the Shaker family K+ channels which include the following groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500).; potassium transport 2/3 (KT2/3); FUNCTIONS IN: inward rectifier potassium channel activity, protein binding, cyclic nucleotide binding; INVOLVED IN: regulation of membrane potential, response to abscisic acid stimulus; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), Protein of unknown function DUF3354 (InterPro:IPR021789), Ankyrin repeat-containing domain (InterPro:IPR020683), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: K+ transporter 1 (TAIR:AT2G26650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 220.0) &  (original description: no original description)","protein_coding"
"Kfl00038_0200","kfl00038_0200_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00038_0280","kfl00038_0280_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00040_0160","kfl00040_0160_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00042_0220","kfl00042_0220_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00045_0200","kfl00045_0200_v1.1","Klebsormidium nitens","(at3g05480 : 323.0) Involved in the regulation of DNA damage repair and homologous recombination.; RAD9; CONTAINS InterPro DOMAIN/s: Rad9 (InterPro:IPR007268), Cell cycle checkpoint, RAD9 (InterPro:IPR016552). & (reliability: 646.0) &  (original description: no original description)","protein_coding"
"Kfl00045_0340","kfl00045_0340_v1.1","Klebsormidium nitens","(at5g48390 : 362.0) Defective in meiotic chromosome segregation. It is involved in crossover formation and involved in both male and female meiosis.; ATZIP4; FUNCTIONS IN: binding; INVOLVED IN: female meiosis, resolution of meiotic recombination intermediates, male meiosis; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Meiosis specific protein SPO22 (InterPro:IPR013940), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 724.0) &  (original description: no original description)","protein_coding"
"Kfl00046_0010","kfl00046_0010_v1.1","Klebsormidium nitens","(at2g29680 : 209.0) Encodes cell division control protein 6 (CDC6).; cell division control 6 (CDC6); FUNCTIONS IN: ATP binding; INVOLVED IN: regulation of cell cycle, DNA replication; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), CDC6, C-terminal (InterPro:IPR015163), Cell division control, Cdc6 (InterPro:IPR016314); BEST Arabidopsis thaliana protein match is: Cell division control, Cdc6 (TAIR:AT1G07270.1); Has 1385 Blast hits to 1377 proteins in 339 species: Archae - 397; Bacteria - 0; Metazoa - 348; Fungi - 289; Plants - 116; Viruses - 0; Other Eukaryotes - 235 (source: NCBI BLink). & (reliability: 418.0) &  (original description: no original description)","protein_coding"
"Kfl00051_0100","kfl00051_0100_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00052_0290","kfl00052_0290_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00053_0050","kfl00053_0050_v1.1","Klebsormidium nitens","(p08437|h3_volca : 147.0) Histone H3 - Volvox carteri & (at5g10980 : 146.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleosome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3 (InterPro:IPR000164), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT4G40030.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 292.0) &  (original description: no original description)","protein_coding"
"Kfl00062_0110","kfl00062_0110_v1.1","Klebsormidium nitens","(at4g01160 : 99.8) BTB/POZ/Kelch-associated protein; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), BTB/Kelch-associated (InterPro:IPR011705), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: POZ/BTB containin G-protein 1 (TAIR:AT3G61600.2); Has 3481 Blast hits to 3463 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 3173; Fungi - 4; Plants - 136; Viruses - 49; Other Eukaryotes - 119 (source: NCBI BLink). & (reliability: 199.6) &  (original description: no original description)","protein_coding"
"Kfl00067_0060","kfl00067_0060_v1.1","Klebsormidium nitens","(at2g01120 : 291.0) Origin Recognition Complex subunit 4. Involved in the initiation of DNA replication. Regulated transcriptionally during cell cycle, peaking at G1/S-phase. Target of E2F/DF family of transcription factors. Interacts with all ORC subunits except ORC1b.; origin recognition complex subunit 4 (ORC4); CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), Origin recognition complex, subunit 4 (InterPro:IPR016527). & (reliability: 582.0) &  (original description: no original description)","protein_coding"
"Kfl00069_0160","kfl00069_0160_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00076_0270","kfl00076_0270_v1.1","Klebsormidium nitens","(at2g32240 : 110.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G05320.3); Has 470429 Blast hits to 168274 proteins in 4282 species: Archae - 6896; Bacteria - 131956; Metazoa - 175525; Fungi - 33166; Plants - 25441; Viruses - 2243; Other Eukaryotes - 95202 (source: NCBI BLink). & (reliability: 212.0) &  (original description: no original description)","protein_coding"
"Kfl00078_0250","kfl00078_0250_v1.1","Klebsormidium nitens","(at4g37210 : 149.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 298.0) &  (original description: no original description)","protein_coding"
"Kfl00090_0100","kfl00090_0100_v1.1","Klebsormidium nitens","(at1g12350 : 296.0) At1g12350 encodes phosphopantothenoylcysteine synthetase (phosphopantothenoylcysteine ligase). Its molecular function was shown to add cysteine forming (R)-4í-phospho-N-pantothenoylcysteine (PPC); 4-phospho-panto-thenoylcysteine synthetase (COAB); FUNCTIONS IN: phosphopantothenate--cysteine ligase activity, catalytic activity; INVOLVED IN: coenzyme A biosynthetic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: DNA/pantothenate metabolism flavoprotein, C-terminal (InterPro:IPR007085); BEST Arabidopsis thaliana protein match is: DNA / pantothenate metabolism flavoprotein (TAIR:AT5G02080.1); Has 721 Blast hits to 697 proteins in 349 species: Archae - 42; Bacteria - 251; Metazoa - 127; Fungi - 134; Plants - 66; Viruses - 4; Other Eukaryotes - 97 (source: NCBI BLink). & (reliability: 592.0) &  (original description: no original description)","protein_coding"
"Kfl00091_g1","kfl00091_g1_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00092_0250","kfl00092_0250_v1.1","Klebsormidium nitens","(at3g55260 : 566.0) Encodes a protein with &#946;-hexosaminidase activity (the enzyme is active with p-nitrophenyl-&#946;-N-acetylglucosaminide as substrate but displayed only a minor activity toward p-nitrophenyl-&#946;-N-acetylgalactosaminide). The enzyme displays no distinct preference for a specific terminal GlcNAc residue and indeed cleaved the asialoagalactodabsylglycopeptide GnGn to a mixture of products.; beta-hexosaminidase 1 (HEXO1); FUNCTIONS IN: hexosaminidase activity, beta-N-acetylhexosaminidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: vacuole, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 20, catalytic core (InterPro:IPR015883), Beta-N-acetylhexosaminidase, subunit a/b (InterPro:IPR015882), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 20 (InterPro:IPR001540), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-hexosaminidase 3 (TAIR:AT1G65590.1); Has 3779 Blast hits to 3705 proteins in 735 species: Archae - 2; Bacteria - 2420; Metazoa - 475; Fungi - 222; Plants - 128; Viruses - 0; Other Eukaryotes - 532 (source: NCBI BLink). & (reliability: 1132.0) &  (original description: no original description)","protein_coding"
"Kfl00110_0160","kfl00110_0160_v1.1","Klebsormidium nitens","(q43814|otc_pea : 464.0) Ornithine carbamoyltransferase, chloroplast precursor (EC 2.1.3.3) (OTCase) (Ornithine transcarbamylase) - Pisum sativum (Garden pea) & (at1g75330 : 438.0) ornithine carbamoyltransferase (OTC); FUNCTIONS IN: amino acid binding, ornithine carbamoyltransferase activity, carboxyl- or carbamoyltransferase activity; INVOLVED IN: cellular amino acid metabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding (InterPro:IPR006132), Aspartate/ornithine carbamoyltransferase (InterPro:IPR006130), Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain (InterPro:IPR006131), Ornithine carbamoyltransferase (InterPro:IPR002292); BEST Arabidopsis thaliana protein match is: PYRIMIDINE B (TAIR:AT3G20330.1); Has 16793 Blast hits to 16793 proteins in 2905 species: Archae - 534; Bacteria - 11079; Metazoa - 203; Fungi - 280; Plants - 150; Viruses - 6; Other Eukaryotes - 4541 (source: NCBI BLink). & (reliability: 876.0) &  (original description: no original description)","protein_coding"
"Kfl00111_0070","kfl00111_0070_v1.1","Klebsormidium nitens","(at1g02970 : 270.0) Protein kinase that negatively regulates the entry into mitosis.; WEE1 kinase homolog (WEE1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G19110.2); Has 100256 Blast hits to 98965 proteins in 4396 species: Archae - 165; Bacteria - 12308; Metazoa - 39873; Fungi - 10996; Plants - 18240; Viruses - 408; Other Eukaryotes - 18266 (source: NCBI BLink). & (q5qn75|m2k1_orysa : 92.8) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 540.0) &  (original description: no original description)","protein_coding"
"Kfl00121_0170","kfl00121_0170_v1.1","Klebsormidium nitens","(at5g54260 : 676.0) DNA repair and meiotic recombination protein, component of MRE11 complex with RAD50 and NBS1; MEIOTIC RECOMBINATION 11 (MRE11); FUNCTIONS IN: hydrolase activity, manganese ion binding, protein serine/threonine phosphatase activity, exonuclease activity, endonuclease activity; INVOLVED IN: double-strand break repair, DNA metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), DNA repair exonuclease (InterPro:IPR003701), Mre11, DNA-binding (InterPro:IPR007281); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1352.0) &  (original description: no original description)","protein_coding"
"Kfl00123_0030","kfl00123_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00125_0130","kfl00125_0130_v1.1","Klebsormidium nitens","(at1g63660 : 770.0) GMP synthase (glutamine-hydrolyzing), putative / glutamine amidotransferase, putative; FUNCTIONS IN: asparagine synthase (glutamine-hydrolyzing) activity, GMP synthase (glutamine-hydrolyzing) activity, catalytic activity, ATP binding; INVOLVED IN: GMP biosynthetic process, glutamine metabolic process, biosynthetic process, asparagine biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Glutamine amidotransferase superfamily (InterPro:IPR011702), GMP synthase, N-terminal (InterPro:IPR004739), Glutamine amidotransferase type 1 (InterPro:IPR017926), Asparagine synthase (InterPro:IPR001962), Anthranilate synthase component II/delta crystallin (InterPro:IPR006220); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1540.0) &  (original description: no original description)","protein_coding"
"Kfl00128_0120","kfl00128_0120_v1.1","Klebsormidium nitens","(at5g61060 : 353.0) Encodes a member of the histone deacetylase family.; histone deacetylase 5 (HDA05); FUNCTIONS IN: histone deacetylase activity; INVOLVED IN: histone deacetylation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase superfamily (InterPro:IPR000286); BEST Arabidopsis thaliana protein match is: histone deacetylase of the RPD3/HDA1 superfamily 18 (TAIR:AT5G61070.1). & (p56521|hdac_maize : 87.4) Probable histone deacetylase (RPD3 homolog) - Zea mays (Maize) & (reliability: 706.0) &  (original description: no original description)","protein_coding"
"Kfl00128_0270","kfl00128_0270_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00129_0010","kfl00129_0010_v1.1","Klebsormidium nitens","(at4g02480 : 322.0) AAA-type ATPase family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), SMAD/FHA domain (InterPro:IPR008984), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT1G02890.1); Has 36961 Blast hits to 32268 proteins in 3150 species: Archae - 1594; Bacteria - 13825; Metazoa - 4872; Fungi - 3636; Plants - 2887; Viruses - 35; Other Eukaryotes - 10112 (source: NCBI BLink). & (p54774|cdc48_soybn : 163.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 644.0) &  (original description: no original description)","protein_coding"
"Kfl00130_0130","kfl00130_0130_v1.1","Klebsormidium nitens","(at5g27740 : 530.0) A locus involved in embryogenesis. Mutations in this locus result in embryo lethality.; EMBRYO DEFECTIVE 2775 (EMB2775); FUNCTIONS IN: nucleoside-triphosphatase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), DNA polymerase III, clamp-loader complex, subunit E, C-terminal (InterPro:IPR019483), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921); BEST Arabidopsis thaliana protein match is: ATPase family associated with various cellular activities (AAA)  (TAIR:AT1G21690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1060.0) &  (original description: no original description)","protein_coding"
"Kfl00137_0060","kfl00137_0060_v1.1","Klebsormidium nitens","(at5g19740 : 575.0) Peptidase M28 family protein; FUNCTIONS IN: dipeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Transferrin receptor-like, dimerisation (InterPro:IPR007365), Peptidase M28 (InterPro:IPR007484); BEST Arabidopsis thaliana protein match is: Peptidase M28 family protein (TAIR:AT3G54720.1); Has 3567 Blast hits to 3525 proteins in 555 species: Archae - 24; Bacteria - 1302; Metazoa - 657; Fungi - 527; Plants - 315; Viruses - 0; Other Eukaryotes - 742 (source: NCBI BLink). & (reliability: 1150.0) &  (original description: no original description)","protein_coding"
"Kfl00151_0140","kfl00151_0140_v1.1","Klebsormidium nitens","(at2g30870 : 188.0) early dehydration-induced gene ERD13 homologous to tobacco and maize glutathione S-transferases.  Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002); glutathione S-transferase PHI 10 (GSTF10); FUNCTIONS IN: glutathione transferase activity, copper ion binding, glutathione binding; INVOLVED IN: response to cadmium ion, response to water deprivation, toxin catabolic process; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase PHI 9 (TAIR:AT2G30860.1); Has 19000 Blast hits to 18970 proteins in 1605 species: Archae - 0; Bacteria - 10344; Metazoa - 2591; Fungi - 970; Plants - 1495; Viruses - 0; Other Eukaryotes - 3600 (source: NCBI BLink). & (p04907|gstf3_maize : 163.0) Glutathione S-transferase III (EC 2.5.1.18) (GST-III) (GST class-phi) - Zea mays (Maize) & (reliability: 376.0) &  (original description: no original description)","protein_coding"
"Kfl00164_0030","kfl00164_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00165_0140","kfl00165_0140_v1.1","Klebsormidium nitens","(at4g29910 : 184.0) Origin Recognition Complex subunit 5. Involved in the initiation of DNA replication. Interacts strongly with all ORC subunits.; origin recognition complex protein 5 (ORC5); CONTAINS InterPro DOMAIN/s: Origin recognition complex, subunit 5 (InterPro:IPR020796); Has 287 Blast hits to 283 proteins in 127 species: Archae - 0; Bacteria - 0; Metazoa - 140; Fungi - 92; Plants - 43; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 368.0) &  (original description: no original description)","protein_coding"
"Kfl00184_0010","kfl00184_0010_v1.1","Klebsormidium nitens","(at2g07690 : 812.0) Member of the minichromosome maintenance complex, involved in DNA replication initiation. Abundant in proliferating and  endocycling tissues. Localized in the nucleus during G1, S and G2 phases of the  cell cycle, and are released into the cytoplasmic compartment during mitosis. Binds chromatin.; MINICHROMOSOME MAINTENANCE 5 (MCM5); FUNCTIONS IN: DNA-dependent ATPase activity, DNA binding, ATP binding; INVOLVED IN: cell proliferation, DNA-dependent DNA replication initiation, DNA unwinding involved in replication; LOCATED IN: nuclear chromatin, nucleus, cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 5 (InterPro:IPR008048); BEST Arabidopsis thaliana protein match is: Minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT2G16440.1). & (q43704|mcm3_maize : 306.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 1624.0) &  (original description: no original description)","protein_coding"
"Kfl00185_0040","kfl00185_0040_v1.1","Klebsormidium nitens","(at1g73970 : 80.1) unknown protein; Has 34 Blast hits to 33 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 160.2) &  (original description: no original description)","protein_coding"
"Kfl00185_0200","kfl00185_0200_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00191_0010","kfl00191_0010_v1.1","Klebsormidium nitens","(at2g44900 : 390.0) ARABIDILLO-1 and its homolog, ARABIDILLO -2, are unique among Arabidopsis Arm-repeat proteins in having an F-box motif and fall into a phylogenetically distinct subgroup from other plant Arm-repeat proteins Similar to arm repeat protein in rice and armadillo/beta-catenin repeat family protein / F-box family protein in Dictyostelium. ARABIDILLO-1 promote lateral root development. Mutant plants form fewer lateral roots, while ARABIDILLO-1-overexpressing lines produce more lateral roots than wild-type seedlings.; ARABIDILLO-1 (ARABIDILLO-1); FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: lateral root development; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARABIDILLO-2 (TAIR:AT3G60350.1); Has 10074 Blast hits to 5287 proteins in 284 species: Archae - 0; Bacteria - 24; Metazoa - 4121; Fungi - 736; Plants - 4117; Viruses - 0; Other Eukaryotes - 1076 (source: NCBI BLink). & (reliability: 780.0) &  (original description: no original description)","protein_coding"
"Kfl00194_0030","kfl00194_0030_v1.1","Klebsormidium nitens","(at3g61620 : 277.0) exonuclease RRP41 (RRP41); RRP41; FUNCTIONS IN: 3'-5'-exoribonuclease activity, RNA binding; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exoribonuclease, phosphorolytic domain 2 (InterPro:IPR015847), Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); BEST Arabidopsis thaliana protein match is: 3'-5'-exoribonuclease family protein (TAIR:AT4G27490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 554.0) &  (original description: no original description)","protein_coding"
"Kfl00201_0050","kfl00201_0050_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00217_0140","kfl00217_0140_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00221_0060","kfl00221_0060_v1.1","Klebsormidium nitens","(at3g19280 : 215.0) Encodes a protein with core &#945;1,3-fucosyltransferase activity.; fucosyltransferase 11 (FUT11); FUNCTIONS IN: 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase activity, transferase activity, transferring glycosyl groups, fucosyltransferase activity; INVOLVED IN: protein amino acid N-linked glycosylation; LOCATED IN: membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 10 (InterPro:IPR001503); BEST Arabidopsis thaliana protein match is: fucosyltransferase 12 (TAIR:AT1G49710.1); Has 1598 Blast hits to 1593 proteins in 204 species: Archae - 4; Bacteria - 180; Metazoa - 1025; Fungi - 0; Plants - 132; Viruses - 0; Other Eukaryotes - 257 (source: NCBI BLink). & (reliability: 430.0) &  (original description: no original description)","protein_coding"
"Kfl00240_0070","kfl00240_0070_v1.1","Klebsormidium nitens","(at5g55280 : 364.0) Encodes one of two FtsZ proteins, tubulin-like proteins, in Arabidopsis.  It is involved in chloroplast division.; homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1 (FTSZ1-1); FUNCTIONS IN: protein binding, structural molecule activity; INVOLVED IN: chloroplast fission, plastid fission; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cell division protein FtsZ, N-terminal (InterPro:IPR000158), Tubulin, conserved site (InterPro:IPR017975), Cell division protein FtsZ, conserved site (InterPro:IPR020805), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: Tubulin/FtsZ family protein (TAIR:AT3G52750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 728.0) &  (original description: no original description)","protein_coding"
"Kfl00244_0090","kfl00244_0090_v1.1","Klebsormidium nitens","(p55857|smt3_orysa : 150.0) Ubiquitin-like protein SMT3 - Oryza sativa (Rice) & (at4g26840 : 149.0) Encodes a small ubiquitin-like modifier (SUMO) polypeptide that becomes covalently attached to various intracellular protein targets, much like ubiquitination, leading to post-translational modification of those targets.; small ubiquitin-like modifier 1 (SUMO1); CONTAINS InterPro DOMAIN/s: Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: small ubiquitin-like modifier 2 (TAIR:AT5G55160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 298.0) &  (original description: no original description)","protein_coding"
"Kfl00261_0150","kfl00261_0150_v1.1","Klebsormidium nitens","(at5g51340 : 294.0) Tetratricopeptide repeat (TPR)-like superfamily protein; Has 214 Blast hits to 140 proteins in 56 species: Archae - 0; Bacteria - 4; Metazoa - 151; Fungi - 0; Plants - 55; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 588.0) &  (original description: no original description)","protein_coding"
"Kfl00262_0190","kfl00262_0190_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00279_0080","kfl00279_0080_v1.1","Klebsormidium nitens","(at4g35470 : 139.0) Encodes PIRL4, a member of the Plant Intracellular Ras-group-related LRRs (Leucine rich repeat proteins). PIRLs are a distinct, plant-specific class of intracellular LRRs that likely mediate protein interactions, possibly in the context of signal transduction.; plant intracellular ras group-related LRR 4 (PIRL4); INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: plant intracellular ras group-related LRR 5 (TAIR:AT2G17440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 278.0) &  (original description: no original description)","protein_coding"
"Kfl00299_0020","kfl00299_0020_v1.1","Klebsormidium nitens","(at5g45560 : 291.0) Pleckstrin homology (PH) domain-containing protein / lipid-binding START domain-containing protein; FUNCTIONS IN: lipid binding; LOCATED IN: mitochondrion; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1336 (InterPro:IPR009769), Lipid-binding START (InterPro:IPR002913), Pleckstrin homology-type (InterPro:IPR011993), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: ENHANCED DISEASE RESISTANCE 2 (TAIR:AT4G19040.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 566.0) &  (original description: no original description)","protein_coding"
"Kfl00307_0080","kfl00307_0080_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00307_0090","kfl00307_0090_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00319_0080","kfl00319_0080_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00322_0110","kfl00322_0110_v1.1","Klebsormidium nitens","(at4g01160 : 82.4) BTB/POZ/Kelch-associated protein; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), BTB/Kelch-associated (InterPro:IPR011705), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: POZ/BTB containin G-protein 1 (TAIR:AT3G61600.2); Has 3481 Blast hits to 3463 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 3173; Fungi - 4; Plants - 136; Viruses - 49; Other Eukaryotes - 119 (source: NCBI BLink). & (reliability: 164.8) &  (original description: no original description)","protein_coding"
"Kfl00336_0090","kfl00336_0090_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00345_0070","kfl00345_0070_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00364_0060","kfl00364_0060_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00376_0060","kfl00376_0060_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00388_0030","kfl00388_0030_v1.1","Klebsormidium nitens","(at1g26170 : 702.0) ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus, docking; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G59020.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1404.0) &  (original description: no original description)","protein_coding"
"Kfl00402_0050","kfl00402_0050_v1.1","Klebsormidium nitens","(at2g32900 : 174.0) homologous to Drosophila ZW10, a centromere/kinetochore protein involved in chromosome segregation; ATZW10; INVOLVED IN: chromosome segregation; LOCATED IN: chromosome, centromeric region, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Centromere/kinetochore protein Zw10 (InterPro:IPR009361); Has 272 Blast hits to 258 proteins in 128 species: Archae - 0; Bacteria - 2; Metazoa - 125; Fungi - 86; Plants - 38; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). & (reliability: 348.0) &  (original description: no original description)","protein_coding"
"Kfl00422_0010","kfl00422_0010_v1.1","Klebsormidium nitens","(at1g44900 : 989.0) Encodes MCM2 (MINICHROMOSOME MAINTENANCE 2), a protein essential to embryo development. Overexpression results in altered root meristem function.; MINICHROMOSOME MAINTENANCE 2 (MCM2); FUNCTIONS IN: DNA-dependent ATPase activity, DNA binding, ATP binding; INVOLVED IN: in 7 processes; LOCATED IN: nuclear chromatin; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 2 (InterPro:IPR008045), MCM protein 2, N-terminal (InterPro:IPR021092); BEST Arabidopsis thaliana protein match is: Minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT2G16440.1). & (q43704|mcm3_maize : 308.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 1978.0) &  (original description: no original description)","protein_coding"
"Kfl00425_0040","kfl00425_0040_v1.1","Klebsormidium nitens","(at1g80560 : 526.0) The AtIMD2 is one out of 3 genes encoding the enzyme 3-isopropylmalate dehydrogenase involved in leucine biosynthesis in Arabidopsis. Its subcellular location has been targeted to plastids.; isopropylmalate dehydrogenase 2 (IMD2); FUNCTIONS IN: 3-isopropylmalate dehydrogenase activity; INVOLVED IN: leucine biosynthetic process, metabolic process; LOCATED IN: chloroplast, chloroplast stroma, plastid, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Isopropylmalate dehydrogenase (InterPro:IPR004429), Isocitrate/isopropylmalate dehydrogenase (InterPro:IPR001804), Isocitrate/isopropylmalate dehydrogenase, conserved site (InterPro:IPR019818); BEST Arabidopsis thaliana protein match is: isopropylmalate dehydrogenase 3 (TAIR:AT1G31180.1); Has 15265 Blast hits to 15265 proteins in 2613 species: Archae - 395; Bacteria - 8292; Metazoa - 578; Fungi - 832; Plants - 243; Viruses - 0; Other Eukaryotes - 4925 (source: NCBI BLink). & (p29102|leu3_brana : 521.0) 3-isopropylmalate dehydrogenase, chloroplast precursor (EC 1.1.1.85) (Beta-IPM dehydrogenase) (IMDH) (3-IPM-DH) - Brassica napus (Rape) & (reliability: 1052.0) &  (original description: no original description)","protein_coding"
"Kfl00445_0100","kfl00445_0100_v1.1","Klebsormidium nitens","(at4g32180 : 979.0) Encodes a protein with pantothenate kinase activity.; pantothenate kinase 2 (PANK2); FUNCTIONS IN: protein binding, pantothenate kinase activity; INVOLVED IN: coenzyme A biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Fumble (InterPro:IPR011602), Domain of unknown function DUF89 (InterPro:IPR002791), Pantothenate kinase, acetyl-CoA regulated, two-domain type (InterPro:IPR015844), Eukaryotic pantothenate kinase (InterPro:IPR004567); BEST Arabidopsis thaliana protein match is: pantothenate kinase 1 (TAIR:AT1G60440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1958.0) &  (original description: no original description)","protein_coding"
"Kfl00456_0120","kfl00456_0120_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00481_0090","kfl00481_0090_v1.1","Klebsormidium nitens","(at4g02060 : 837.0) Member of the minichromosome maintenance complex, involved in DNA replication initiation. Abundant in proliferating and  endocycling tissues. Localized in the nucleus during G1, S and G2 phases of the  cell cycle, and are released into the cytoplasmic compartment during mitosis. Binds chromatin.; PROLIFERA (PRL); CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), ATPase, AAA+ type, core (InterPro:IPR003593), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 7 (InterPro:IPR008050); BEST Arabidopsis thaliana protein match is: minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT5G44635.1). & (q43704|mcm3_maize : 242.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 1674.0) &  (original description: no original description)","protein_coding"
"Kfl00502_0020","kfl00502_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00502_0080","kfl00502_0080_v1.1","Klebsormidium nitens","(at4g18465 : 521.0) RNA helicase family protein; FUNCTIONS IN: RNA helicase activity, helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase family protein (TAIR:AT1G32490.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1042.0) &  (original description: no original description)","protein_coding"
"Kfl00511_0080","kfl00511_0080_v1.1","Klebsormidium nitens","(at2g24580 : 319.0) FAD-dependent oxidoreductase family protein; FUNCTIONS IN: sarcosine oxidase activity; INVOLVED IN: tetrahydrofolate metabolic process, oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAD dependent oxidoreductase (InterPro:IPR006076), Sarcosine oxidase, monomeric (InterPro:IPR006281); Has 4031 Blast hits to 4005 proteins in 935 species: Archae - 135; Bacteria - 2670; Metazoa - 148; Fungi - 247; Plants - 60; Viruses - 0; Other Eukaryotes - 771 (source: NCBI BLink). & (reliability: 638.0) &  (original description: no original description)","protein_coding"
"Kfl00523_0070","kfl00523_0070_v1.1","Klebsormidium nitens","(at5g58230 : 676.0) Encodes a WD-40 repeat containing protein that functions in chromatin assembly as part of the CAF1 and FIE complex. Mutants exhibit parthenogenetic development that includes proliferation of unfertilized endosperm and embryos. In heterozygous plants 50% of embryos abort. Of the aborted embryos the early aborted class are homozygous and the later aborting lass are heterozygotes in which the defective allele is maternally transmitted. Other phenotypes include defects in ovule morphogenesis and organ initiation,as well as increased levels of heterochromatic DNA. MSI1 is needed for the transition to flowering. In Arabidopsis, the three CAF-1 subunits are encoded by FAS1, FAS2 and, most likely, MSI1, respectively. Mutations in FAS1 or FAS2 lead to increased frequency of homologous recombination and T-DNA integration in Arabidopsis. In the ovule, the MSI1 transcripts are accumulated at their highest level before fertilization and gradually decrease after fertilization. MSI is biallelically expressed, the paternall allele is expressed in the endosperm and embryo and is not imprinted. MSI1 forms a complex with RBR1 that is required for activation of the imprinted genes FIS2 and FWA. This activation is mediated by MSI1/RBR1 mediated repression of MET1.; MULTICOPY SUPRESSOR OF IRA1 (MSI1); FUNCTIONS IN: protein binding; INVOLVED IN: in 13 processes; LOCATED IN: nucleus, chloroplast, chromatin remodeling complex, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histone-binding protein RBBP4 (InterPro:IPR022052), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT2G16780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1352.0) &  (original description: no original description)","protein_coding"
"Kfl00545_0070","kfl00545_0070_v1.1","Klebsormidium nitens","(at3g02920 : 139.0) RPA32B; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Replication protein A, subunit RPA32 (InterPro:IPR014646), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Replication protein A, C-terminal (InterPro:IPR014892); BEST Arabidopsis thaliana protein match is: replicon protein A2 (TAIR:AT2G24490.2). & (reliability: 278.0) &  (original description: no original description)","protein_coding"
"Kfl00567_0050","kfl00567_0050_v1.1","Klebsormidium nitens","(at2g14050 : 705.0) minichromosome maintenance 9 (MCM9); FUNCTIONS IN: nucleoside-triphosphatase activity, DNA-dependent ATPase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: DNA-dependent DNA replication initiation, DNA replication; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), ATPase, AAA+ type, core (InterPro:IPR003593), DNA-dependent ATPase MCM (InterPro:IPR001208); BEST Arabidopsis thaliana protein match is: minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT1G44900.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q43704|mcm3_maize : 258.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 1410.0) &  (original description: no original description)","protein_coding"
"Kfl00579_0030","kfl00579_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00609_0010","kfl00609_0010_v1.1","Klebsormidium nitens","(p49310|grp1_sinal : 126.0) Glycine-rich RNA-binding protein GRP1A - Sinapis alba (White mustard) (Brassica hirta) & (at2g21660 : 124.0) Encodes a small glycine-rich RNA binding protein that is part of a negative-feedback loop through which AtGRP7 regulates the circadian oscillations of its own transcript.  Gene expression is induced by cold. GRP7 appears to promote stomatal opening and reduce tolerance under salt and dehydration stress conditions, but, promotes stomatal closing and thereby increases stress tolerance under conditions of cold tolerance. Loss of function mutations have increased susceptibility to pathogens suggesting a role in mediating innate immune response. Mutants are also late flowering in a non-photoperiodic manner and are responsive to vernalization suggesting an interaction with the autonomous flowering pathway.   There is a reduction of mRNA export from the nucleus in grp7 mutants. GRP7:GFP fusion proteins can be found in the cytosol and nucleus.  A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).; GLYCINE RICH PROTEIN 7 (ATGRP7); FUNCTIONS IN: double-stranded DNA binding, RNA binding, single-stranded DNA binding; INVOLVED IN: in 12 processes; LOCATED IN: nucleus, chloroplast, peroxisome, cytoplasm; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein (InterPro:IPR015465), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: cold, circadian rhythm, and RNA binding 1 (TAIR:AT4G39260.3); Has 381 Blast hits to 381 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 191; Fungi - 60; Plants - 124; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 248.0) &  (original description: no original description)","protein_coding"
"Kfl00635_0050","kfl00635_0050_v1.1","Klebsormidium nitens","(at1g63680 : 628.0) Encodes AtMurE, a homolog of the bacterial MurE that catalyze the ATP-dependent formation of UDP-N-acetylmuramic acid-tripeptide in bacterial peptidoglycan biosynthesis.  Localized to plastids.  AtMurE is involved in chloroplast biogenesis.; MURE; FUNCTIONS IN: acid-amino acid ligase activity, ATP binding, ligase activity; INVOLVED IN: chloroplast fission, chloroplast organization, biosynthetic process; LOCATED IN: chloroplast, nucleoid; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Mur ligase, central (InterPro:IPR013221), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (InterPro:IPR005761), Mur ligase, N-terminal (InterPro:IPR000713), Mur ligase, C-terminal (InterPro:IPR004101); Has 18234 Blast hits to 18170 proteins in 2587 species: Archae - 50; Bacteria - 13487; Metazoa - 59; Fungi - 43; Plants - 60; Viruses - 2; Other Eukaryotes - 4533 (source: NCBI BLink). & (reliability: 1256.0) &  (original description: no original description)","protein_coding"
"Kfl00639_0030","kfl00639_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00659_0070","kfl00659_0070_v1.1","Klebsormidium nitens","(at1g59520 : 282.0) Encodes CW7.; CW7; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2045 (InterPro:IPR019141); Has 145 Blast hits to 144 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 91; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 564.0) &  (original description: no original description)","protein_coding"
"Kfl00661_0060","kfl00661_0060_v1.1","Klebsormidium nitens","(at4g16440 : 554.0) Encodes a [FeFe]-hydrogenase-like protein named Gollum (for Growth in different Oxygen LeveLs in&#64258;Uences Morphogenesis).  Heterologous expression of Gollum in E. coli indicates that it probably contains two [Fe-S] clusters with different magnetic properties. Sequence alignment analysis indicates that these two clusters would be topologically equivalent to the mesial and proximal [Fe-S] centers of [FeFe]-hydrogenases. Knockdown mutants (RNAi) show a dwarf phenotype at the normal atmospheric partial oxygen pressure of 21 kPa.  This dwarf phenotype could be rescued by growing the plant under low oxygen pressure (5kPa), suggesting a role for this gene in oxygen sensing.; ferredoxin hydrogenases; CONTAINS InterPro DOMAIN/s: Iron hydrogenase, large subunit, C-terminal (InterPro:IPR004108), Iron hydrogenase (InterPro:IPR009016), Iron hydrogenase, small subunit-like (InterPro:IPR003149); Has 2574 Blast hits to 2544 proteins in 612 species: Archae - 1; Bacteria - 1826; Metazoa - 221; Fungi - 188; Plants - 72; Viruses - 0; Other Eukaryotes - 266 (source: NCBI BLink). & (reliability: 1108.0) &  (original description: no original description)","protein_coding"
"Kfl00662_0040","kfl00662_0040_v1.1","Klebsormidium nitens","(at1g16520 : 201.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G56080.1); Has 243 Blast hits to 234 proteins in 69 species: Archae - 2; Bacteria - 2; Metazoa - 61; Fungi - 9; Plants - 125; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (reliability: 402.0) &  (original description: no original description)","protein_coding"
"Kfl00729_0030","kfl00729_0030_v1.1","Klebsormidium nitens","(at5g40200 : 650.0) Encodes a putative DegP protease.; DegP protease 9 (DegP9); FUNCTIONS IN: serine-type peptidase activity, catalytic activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: nucleolus, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), Serine endopeptidase DegP2 (InterPro:IPR015724), Peptidase S1C, HrtA/DegP2/Q/S (InterPro:IPR001940), Peptidase S1/S6, chymotrypsin/Hap (InterPro:IPR001254), PDZ/DHR/GLGF (InterPro:IPR001478); BEST Arabidopsis thaliana protein match is: DEGP protease 2 (TAIR:AT2G47940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1300.0) &  (original description: no original description)","protein_coding"
"Kfl00771_0050","kfl00771_0050_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00788_0010","kfl00788_0010_v1.1","Klebsormidium nitens","(at5g46280 : 794.0) MINICHROMOSOME MAINTENANCE 3 (MCM3); FUNCTIONS IN: nucleoside-triphosphatase activity, DNA-dependent ATPase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: cell proliferation, DNA-dependent DNA replication initiation, DNA unwinding involved in replication; LOCATED IN: nuclear chromatin; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), ATPase, AAA+ type, core (InterPro:IPR003593), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 3 (InterPro:IPR008046); BEST Arabidopsis thaliana protein match is: Minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT4G02060.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43704|mcm3_maize : 643.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 1588.0) &  (original description: no original description)","protein_coding"
"Kfl00839_0060","kfl00839_0060_v1.1","Klebsormidium nitens","(at3g05420 : 80.1) Acyl-CoA binding protein with high affinity for   oleoyl-CoA. Expressed in all plant organs. Involved in fatty acid transport.; acyl-CoA binding protein 4 (ACBP4); FUNCTIONS IN: acyl-CoA binding; INVOLVED IN: lipid transport; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 2 (InterPro:IPR011498), Acyl-CoA-binding protein, ACBP (InterPro:IPR000582), Kelch-type beta propeller (InterPro:IPR015915), FERM/acyl-CoA-binding protein, 3-helical bundle (InterPro:IPR014352); BEST Arabidopsis thaliana protein match is: acyl-CoA binding protein 5 (TAIR:AT5G27630.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 160.2) &  (original description: no original description)","protein_coding"
"Kfl01033_0030","kfl01033_0030_v1.1","Klebsormidium nitens","(p42210|aspr_horvu : 539.0) Phytepsin precursor (EC 3.4.23.40) (Aspartic proteinase) [Contains: Phytepsin 32 kDa subunit; Phytepsin 29 kDa subunit; Phytepsin 16 kDa subunit; Phytepsin 11 kDa subunit] - Hordeum vulgare (Barley) & (at1g11910 : 532.0) Encodes an aspartic proteinase that forms a heterodimer and is stable over a broad pH range (ph 3-8).; aspartic proteinase A1 (APA1); FUNCTIONS IN: endopeptidase activity; INVOLVED IN: proteolysis, response to salt stress; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Saposin-like (InterPro:IPR011001), Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Saposin-like type B, 1 (InterPro:IPR007856), Saposin-like type B, 2 (InterPro:IPR008138), Saposin B (InterPro:IPR008139), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Saposin-like aspartyl protease family protein (TAIR:AT1G62290.2); Has 7443 Blast hits to 5200 proteins in 420 species: Archae - 0; Bacteria - 2; Metazoa - 4134; Fungi - 1703; Plants - 675; Viruses - 0; Other Eukaryotes - 929 (source: NCBI BLink). & (reliability: 1064.0) &  (original description: no original description)","protein_coding"
"Kfl01292_0010","kfl01292_0010_v1.1","Klebsormidium nitens","(at2g40550 : 368.0) Encodes a nuclear localized target of E2Fa-DPa, transcription factors controlling cell cycle progression. Required for sister chromatid cohesion and DNA repair.; E2F target gene 1 (ETG1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: sister chromatid cohesion, postreplication repair, DNA replication; LOCATED IN: nuclear replisome, nucleus, chloroplast envelope, MCM complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2044, membrane (InterPro:IPR019140); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 736.0) &  (original description: no original description)","protein_coding"
"Kfl01305_0010","kfl01305_0010_v1.1","Klebsormidium nitens","(at4g18270 : 152.0) Encodes protein similar to similar to bacterial translocase I (mra Y).  Expressed during flower bud development.; translocase 11 (TRANS11); CONTAINS InterPro DOMAIN/s: Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site (InterPro:IPR018480), Phospho-N-acetylmuramoyl-pentapeptide transferase (InterPro:IPR003524), Glycosyl transferase, family 4 (InterPro:IPR000715), Glycosyl transferase, family 4, conserved region (InterPro:IPR018481); Has 1367 Blast hits to 1365 proteins in 548 species: Archae - 16; Bacteria - 1334; Metazoa - 1; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 304.0) &  (original description: no original description)","protein_coding"
"LOC_Os01g05790","No alias","Oryza sativa","SLT1 protein, putative, expressed","protein_coding"
"LOC_Os01g07970","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g09220","No alias","Oryza sativa","transposon protein, putative, CACTA, En/Spm sub-class, expressed","protein_coding"
"LOC_Os01g13010","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g14310","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g16940","No alias","Oryza sativa","MazG nucleotide pyrophosphohydrolase domain containing protein, expressed","protein_coding"
"LOC_Os01g20800","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g27240","No alias","Oryza sativa","12-oxophytodienoate reductase, putative, expressed","protein_coding"
"LOC_Os01g35840","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g40940","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g49340","No alias","Oryza sativa","arginine/serine-rich coiled-coil protein 1, putative, expressed","protein_coding"
"LOC_Os01g53140","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g53710","No alias","Oryza sativa","dual specificity protein phosphatase, putative, expressed","protein_coding"
"LOC_Os01g57430","No alias","Oryza sativa","hypothetical protein","protein_coding"
"LOC_Os01g57910","No alias","Oryza sativa","KH domain containing protein, putative, expressed","protein_coding"
"LOC_Os01g62380","No alias","Oryza sativa","fasciclin-like arabinogalactan protein, putative, expressed","protein_coding"
"LOC_Os01g64250","No alias","Oryza sativa","hemerythrin family protein, expressed","protein_coding"
"LOC_Os01g66690","No alias","Oryza sativa","ZIP4/SPO22, putative, expressed","protein_coding"
"LOC_Os02g07240","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g09380","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g13670","No alias","Oryza sativa","helix-loop-helix DNA-binding domain containing protein, expressed","protein_coding"
"LOC_Os02g16290","No alias","Oryza sativa","transposon protein, putative, Mutator sub-class, expressed","protein_coding"
"LOC_Os02g18090","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g21660","No alias","Oryza sativa","L1P family of ribosomal proteins domain containing protein, expressed","protein_coding"
"LOC_Os02g26404","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g36030","No alias","Oryza sativa","cytochrome P450, putative, expressed","protein_coding"
"LOC_Os02g38970","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g40680","No alias","Oryza sativa","mis12 protein, expressed","protein_coding"
"LOC_Os02g49250","No alias","Oryza sativa","myb-like DNA-binding domain containing protein, expressed","protein_coding"
"LOC_Os02g56130","No alias","Oryza sativa","PCNA - Putative DNA replicative polymerase clamp, expressed","protein_coding"
"LOC_Os02g58510","No alias","Oryza sativa","GHMP kinases ATP-binding protein, putative, expressed","protein_coding"
"LOC_Os03g04640","No alias","Oryza sativa","cytochrome P450 protein, putative, expressed","protein_coding"
"LOC_Os03g06610","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g08300","No alias","Oryza sativa","glycosyl transferase, group 1 domain containing protein, expressed","protein_coding"
"LOC_Os03g13800","No alias","Oryza sativa","ribosomal protein L7Ae, putative, expressed","protein_coding"
"LOC_Os03g15940","No alias","Oryza sativa","OsWLIM2 - LIM domain protein, putative actin-binding protein and transcription factor, expressed","protein_coding"
"LOC_Os03g19462","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g51580","No alias","Oryza sativa","helix-loop-helix DNA-binding domain containing protein, expressed","protein_coding"
"LOC_Os03g52960","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g60810","No alias","Oryza sativa","lectin-like receptor kinase, putative, expressed","protein_coding"
"LOC_Os03g61500","No alias","Oryza sativa","uncharacterized Cys-rich domain containing protein, putative, expressed","protein_coding"
"LOC_Os03g61970","No alias","Oryza sativa","actin, putative, expressed","protein_coding"
"LOC_Os03g63410","No alias","Oryza sativa","elongation factor Tu, putative, expressed","protein_coding"
"LOC_Os04g02510","No alias","Oryza sativa","ZOS4-01 - C2H2 zinc finger protein, expressed","protein_coding"
"LOC_Os04g10140","No alias","Oryza sativa","hypothetical protein","protein_coding"
"LOC_Os04g22360","No alias","Oryza sativa","DUF647 domain containing protein, putative, expressed","protein_coding"
"LOC_Os04g32710","No alias","Oryza sativa","40S ribosomal protein S27, putative, expressed","protein_coding"
"LOC_Os04g33030","No alias","Oryza sativa","protein binding protein, putative, expressed","protein_coding"
"LOC_Os04g33220","No alias","Oryza sativa","SAM domain family protein, expressed","protein_coding"
"LOC_Os04g48060","No alias","Oryza sativa","RFC2 - Putative clamp loader of PCNA, replication factor C subunit 2, expressed","protein_coding"
"LOC_Os04g51140","No alias","Oryza sativa","E2F-related protein, putative, expressed","protein_coding"
"LOC_Os04g51760","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os04g56520","No alias","Oryza sativa","alpha-1,4-glucan-protein synthase, putative, expressed","protein_coding"
"LOC_Os05g02990","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os05g13830","No alias","Oryza sativa","TsetseEP precursor, putative, expressed","protein_coding"
"LOC_Os05g31230","No alias","Oryza sativa","N-acetyltransferase ESCO1, putative, expressed","protein_coding"
"LOC_Os05g35650","No alias","Oryza sativa","peptide transporter PTR2, putative, expressed","protein_coding"
"LOC_Os05g38500","No alias","Oryza sativa","fasciclin-like arabinogalactan protein, putative, expressed","protein_coding"
"LOC_Os05g43170","No alias","Oryza sativa","calreticulin precursor protein, putative, expressed","protein_coding"
"LOC_Os06g06000","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os06g06450","No alias","Oryza sativa","heat shock protein STI, putative, expressed","protein_coding"
"LOC_Os06g12720","No alias","Oryza sativa","retrotransposon protein, putative, unclassified, expressed","protein_coding"
"LOC_Os06g17300","No alias","Oryza sativa","hypothetical protein","protein_coding"
"LOC_Os06g23310","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os06g32290","No alias","Oryza sativa","THION10 - Plant thionin family protein precursor","protein_coding"
"LOC_Os06g35470","No alias","Oryza sativa","L1P family of ribosomal proteins domain containing protein, expressed","protein_coding"
"LOC_Os06g37510","No alias","Oryza sativa","tetraspanin family protein, putative, expressed","protein_coding"
"LOC_Os06g46160","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os06g46410","No alias","Oryza sativa","auxin response factor, putative, expressed","protein_coding"
"LOC_Os06g47290","No alias","Oryza sativa","growth regulator related protein, putative, expressed","protein_coding"
"LOC_Os07g08470","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os07g13234","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os07g14930","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os07g38430","No alias","Oryza sativa","WD domain, G-beta repeat domain containing protein, expressed","protein_coding"
"LOC_Os07g42950","No alias","Oryza sativa","40S ribosomal protein S6, putative, expressed","protein_coding"
"LOC_Os08g01220","No alias","Oryza sativa","harpin-induced protein 1 domain containing protein, expressed","protein_coding"
"LOC_Os08g03002","No alias","Oryza sativa","lectin-like receptor kinase 1, putative, expressed","protein_coding"
"LOC_Os08g17140","No alias","Oryza sativa","retrotransposon protein, putative, unclassified, expressed","protein_coding"
"LOC_Os08g23110","No alias","Oryza sativa","tRNA synthetase, putative, expressed","protein_coding"
"LOC_Os08g28110","No alias","Oryza sativa","hypothetical protein","protein_coding"
"LOC_Os08g44110","No alias","Oryza sativa","retrotransposon protein, putative, unclassified, expressed","protein_coding"
"LOC_Os08g44790","No alias","Oryza sativa","expansin precursor, putative, expressed","protein_coding"
"LOC_Os09g17680","No alias","Oryza sativa","NAD kinase, putative, expressed","protein_coding"
"LOC_Os09g27650","No alias","Oryza sativa","ZOS9-14 - C2H2 zinc finger protein, expressed","protein_coding"
"LOC_Os09g27700","No alias","Oryza sativa","microtubule associated protein, putative, expressed","protein_coding"
"LOC_Os09g28710","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os09g30160","No alias","Oryza sativa","zinc finger, C3HC4 type domain containing protein, expressed","protein_coding"
"LOC_Os09g34000","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os09g34290","No alias","Oryza sativa","transposon protein, putative, CACTA, En/Spm sub-class, expressed","protein_coding"
"LOC_Os09g37040","No alias","Oryza sativa","DUF630/DUF632 domains containing protein, putative, expressed","protein_coding"
"LOC_Os10g02380","No alias","Oryza sativa","oxidoreductase, aldo/keto reductase family protein, putative, expressed","protein_coding"
"LOC_Os10g03540","No alias","Oryza sativa","ribosomal protein L7Ae, putative, expressed","protein_coding"
"LOC_Os10g16930","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os10g26460","No alias","Oryza sativa","bHLH family protein, putative, expressed","protein_coding"
"LOC_Os10g27180","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os10g30310","No alias","Oryza sativa","zinc finger, C3HC4 type domain containing protein, expressed","protein_coding"
"LOC_Os10g34795","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os10g35680","No alias","Oryza sativa","acetyltransferase, GNAT family, putative, expressed","protein_coding"
"LOC_Os10g40740","No alias","Oryza sativa","helix-loop-helix DNA-binding domain containing protein, expressed","protein_coding"
"LOC_Os11g02470","No alias","Oryza sativa","WRKY52, expressed","protein_coding"
"LOC_Os11g06780","No alias","Oryza sativa","serine/threonine-protein kinase BRI1-like 1 precursor, putative, expressed","protein_coding"
"LOC_Os11g07550","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os11g09684","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os11g09710","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os11g12590","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os11g24610","No alias","Oryza sativa","60S ribosomal protein L38, putative, expressed","protein_coding"
"LOC_Os11g28070","No alias","Oryza sativa","retrotransposon protein, putative, unclassified","protein_coding"
"LOC_Os11g29290","No alias","Oryza sativa","cytochrome P450, putative, expressed","protein_coding"
"LOC_Os11g37090","No alias","Oryza sativa","pumilio-family RNA binding repeat domain containing protein, expressed","protein_coding"
"LOC_Os11g47660","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os12g03780","No alias","Oryza sativa","hypothetical protein","protein_coding"
"LOC_Os12g06650","No alias","Oryza sativa","tetratricopeptide-like helical, putative, expressed","protein_coding"
"LOC_Os12g11270","No alias","Oryza sativa","retrotransposon protein, putative, Ty3-gypsy subclass","protein_coding"
"LOC_Os12g13320","No alias","Oryza sativa","argininosuccinate synthase, chloroplast precursor, putative, expressed","protein_coding"
"LOC_Os12g26470","No alias","Oryza sativa","aspartic proteinase nepenthesin-1 precursor, putative, expressed","protein_coding"
"LOC_Os12g29430","No alias","Oryza sativa","OsWAK125 - OsWAK receptor-like  protein OsWAK-RLP, expressed","protein_coding"
"LOC_Os12g32992","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os12g36930","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os12g37510","No alias","Oryza sativa","UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed","protein_coding"
"LOC_Os12g39070","No alias","Oryza sativa","TATA-binding protein, putative, expressed","protein_coding"
"LOC_Os12g43110","No alias","Oryza sativa","OsSAUR58 - Auxin-responsive SAUR gene family member, expressed","protein_coding"
"MA_10214098g0010","No alias","Picea abies","(at4g33170 : 616.0) Tetratricopeptide repeat (TPR)-like superfamily protein; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G09950.1); Has 55398 Blast hits to 13784 proteins in 253 species: Archae - 0; Bacteria - 15; Metazoa - 97; Fungi - 52; Plants - 54672; Viruses - 0; Other Eukaryotes - 562 (source: NCBI BLink). & (q76c99|rf1_orysa : 124.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1232.0) &  (original description: no original description)","protein_coding"
"MA_10326002g0010","No alias","Picea abies","(at4g05320 : 855.0) One of five polyubiquitin genes in A. thaliana.  These genes encode the highly conserved 76-amino acid protein ubiquitin that is covalently attached to substrate proteins targeting most for degradation. Polyubiquitin genes are characterized by the presence of tandem repeats of the 228 bp that encode a ubiquitin monomer. Induced by salicylic acid. Independent of NPR1 for their induction by salicylic acid.; polyubiquitin 10 (UBQ10); CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: ubiquitin 4 (TAIR:AT5G20620.1); Has 32669 Blast hits to 7219 proteins in 726 species: Archae - 0; Bacteria - 99; Metazoa - 15287; Fungi - 3767; Plants - 6623; Viruses - 815; Other Eukaryotes - 6078 (source: NCBI BLink). & (p69326|ubiq_wheat : 150.0) Ubiquitin - Triticum aestivum (Wheat) & (reliability: 1710.0) &  (original description: no original description)","protein_coding"
"MA_10425836g0010","No alias","Picea abies","(at5g42950 : 358.0) GYF domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GYF (InterPro:IPR003169); BEST Arabidopsis thaliana protein match is: GYF domain-containing protein (TAIR:AT1G24300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 716.0) &  (original description: no original description)","protein_coding"
"MA_10428704g0010","No alias","Picea abies","(at5g14540 : 206.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), UBA-like (InterPro:IPR009060), Protein of unknown function DUF1421 (InterPro:IPR010820); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1421) (TAIR:AT3G01560.1); Has 114087 Blast hits to 62694 proteins in 2427 species: Archae - 138; Bacteria - 16154; Metazoa - 45092; Fungi - 21109; Plants - 14949; Viruses - 2278; Other Eukaryotes - 14367 (source: NCBI BLink). & (reliability: 412.0) &  (original description: no original description)","protein_coding"
"MA_10433460g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_10435314g0010","No alias","Picea abies","(at2g43410 : 434.0) FPA  is a gene that regulates flowering time in Arabidopsis via a pathway that is independent of daylength (the autonomous  pathway). Mutations in  FPA  result in extremely delayed flowering. Double mutants with FCA have reduced fertility and single/double mutants have defects in siRNA mediated chromatin silencing.; FPA; CONTAINS InterPro DOMAIN/s: Spen paralogue and orthologue SPOC, C-terminal (InterPro:IPR012921), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA recognition motif (RRM)-containing protein (TAIR:AT4G12640.1); Has 504799 Blast hits to 501692 proteins in 22138 species: Archae - 10949; Bacteria - 306025; Metazoa - 96089; Fungi - 13914; Plants - 29775; Viruses - 36050; Other Eukaryotes - 11997 (source: NCBI BLink). & (reliability: 868.0) &  (original description: no original description)","protein_coding"
"MA_11233g0040","No alias","Picea abies","(at5g58040 : 113.0) Encodes a subunit of the polyadenylation apparatus that interacts with and stimulates the activity of poly(A) polymerase.  Additionally , it interacts with several polyadenylation factor subunits and is an RNA-binding protein.  It is suggested that this protein coordinates a number of polyadenylation factor subunits with PAP and with RNA.; homolog of yeast FIP1 [V] (FIP1[V]); FUNCTIONS IN: protein binding, RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Fip1 (InterPro:IPR007854); BEST Arabidopsis thaliana protein match is: fip1 motif-containing protein (TAIR:AT3G66652.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 226.0) &  (original description: no original description)","protein_coding"
"MA_112953g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_119405g0010","No alias","Picea abies","(at2g02040 : 772.0) Encodes a di- and tri-peptide transporter that recognizes a variety of different amino acid combinations. Expression of the transcripts for this gene can be detected in the embryo through in situ hybridization. This protein does not have nitrate transporter activity based on oocyte transport assays.; peptide transporter 2 (PTR2); FUNCTIONS IN: dipeptide transporter activity, high affinity oligopeptide transporter activity, tripeptide transporter activity, peptide transporter activity, transporter activity; INVOLVED IN: dipeptide transport, tripeptide transport, peptide transport; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G62200.1); Has 8080 Blast hits to 7668 proteins in 1494 species: Archae - 0; Bacteria - 3960; Metazoa - 799; Fungi - 488; Plants - 2224; Viruses - 0; Other Eukaryotes - 609 (source: NCBI BLink). & (reliability: 1406.0) &  (original description: no original description)","protein_coding"
"MA_121710g0010","No alias","Picea abies","(at5g01520 : 327.0) RING/U-box superfamily protein; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G47160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 654.0) &  (original description: no original description)","protein_coding"
"MA_126339g0010","No alias","Picea abies","(at2g36300 : 207.0) Integral membrane Yip1 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Yip1 domain (InterPro:IPR006977); BEST Arabidopsis thaliana protein match is: Integral membrane Yip1 family protein (TAIR:AT3G52760.1); Has 658 Blast hits to 658 proteins in 200 species: Archae - 0; Bacteria - 0; Metazoa - 333; Fungi - 123; Plants - 111; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). & (reliability: 414.0) &  (original description: no original description)","protein_coding"
"MA_140260g0010","No alias","Picea abies","(at1g54130 : 680.0) RELA/SPOT homolog 3 (RSH3); FUNCTIONS IN: GTP diphosphokinase activity; INVOLVED IN: guanosine tetraphosphate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Metal-dependent phosphohydrolase, HD subdomain (InterPro:IPR006674), Metal-dependent phosphohydrolase, HD domain (InterPro:IPR003607), RelA/SpoT (InterPro:IPR007685); BEST Arabidopsis thaliana protein match is: RELA/SPOT homolog 2 (TAIR:AT3G14050.1); Has 13036 Blast hits to 12330 proteins in 2448 species: Archae - 4; Bacteria - 8654; Metazoa - 208; Fungi - 27; Plants - 218; Viruses - 4; Other Eukaryotes - 3921 (source: NCBI BLink). & (reliability: 1360.0) &  (original description: no original description)","protein_coding"
"MA_14076g0010","No alias","Picea abies","(at1g22930 : 642.0) T-complex protein 11; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: T-complex 11 (InterPro:IPR008862); BEST Arabidopsis thaliana protein match is: T-complex protein 11 (TAIR:AT4G09150.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1284.0) &  (original description: no original description)","protein_coding"
"MA_17693g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_17746g0010","No alias","Picea abies","(at2g41900 : 491.0) CCCH-type zinc finger protein with ARM repeat domain; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: CCCH-type zinc finger protein with ARM repeat domain (TAIR:AT5G12850.1); Has 5399 Blast hits to 3519 proteins in 384 species: Archae - 10; Bacteria - 312; Metazoa - 2497; Fungi - 280; Plants - 489; Viruses - 8; Other Eukaryotes - 1803 (source: NCBI BLink). & (reliability: 982.0) &  (original description: no original description)","protein_coding"
"MA_182125g0010","No alias","Picea abies","(at1g03290 : 168.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02880.2). & (reliability: 336.0) &  (original description: no original description)","protein_coding"
"MA_27769g0010","No alias","Picea abies","(at2g46500 : 598.0) Phosphoinositide  kinase which undergo autophosphorylation and phosphorylate serine/threonine  residues of protein substrates. Contains phosphoinositide 3/4-kinase and ubiquitin-like domains. Phosphorylates PUFD1 and RPN10 in vitro.; phosphoinositide 4-kinase gamma 4 (PI4K GAMMA 4); CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol 3- and 4-kinase ;Ubiquitin family protein (TAIR:AT5G24240.1). & (reliability: 1196.0) &  (original description: no original description)","protein_coding"
"MA_315374g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_34934g0010","No alias","Picea abies","(at1g67190 : 472.0) F-box/RNI-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT1G10780.1). & (reliability: 944.0) &  (original description: no original description)","protein_coding"
"MA_37588g0020","No alias","Picea abies","(at4g32620 : 187.0) Enhancer of polycomb-like transcription factor protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tudor domain (InterPro:IPR002999), Enhancer of polycomb-like (InterPro:IPR019542); BEST Arabidopsis thaliana protein match is: Enhancer of polycomb-like transcription factor protein (TAIR:AT5G04670.1); Has 578 Blast hits to 531 proteins in 105 species: Archae - 0; Bacteria - 30; Metazoa - 78; Fungi - 45; Plants - 268; Viruses - 0; Other Eukaryotes - 157 (source: NCBI BLink). & (reliability: 374.0) &  (original description: no original description)","protein_coding"
"MA_43386g0010","No alias","Picea abies","(at1g10170 : 696.0) Encodes AtNFXL1, a homologue of the putative human transcription repressor NF-X1.  Functions as a negative regulator of the trichothecene phytotoxin-induced defense response.; NF-X-like 1 (NFXL1); FUNCTIONS IN: zinc ion binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, NF-X1-type (InterPro:IPR000967), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;zinc ion binding;sequence-specific DNA binding transcription factors (TAIR:AT5G05660.1); Has 6781 Blast hits to 3735 proteins in 261 species: Archae - 0; Bacteria - 123; Metazoa - 4814; Fungi - 547; Plants - 327; Viruses - 10; Other Eukaryotes - 960 (source: NCBI BLink). & (reliability: 1392.0) &  (original description: no original description)","protein_coding"
"MA_55500g0010","No alias","Picea abies","(at5g04550 : 337.0) Protein of unknown function (DUF668); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF668 (InterPro:IPR007700), Protein of unknown function DUF3475 (InterPro:IPR021864); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF668) (TAIR:AT3G23160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 674.0) &  (original description: no original description)","protein_coding"
"MA_57875g0010","No alias","Picea abies","(at5g51300 : 630.0) splicing factor-related; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA splicing; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111), RNA recognition motif, RNP-1 (InterPro:IPR000504), K Homology, type 1 (InterPro:IPR004088), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT1G09660.1); Has 82686 Blast hits to 53020 proteins in 1818 species: Archae - 38; Bacteria - 8214; Metazoa - 37936; Fungi - 14163; Plants - 12444; Viruses - 1255; Other Eukaryotes - 8636 (source: NCBI BLink). & (reliability: 1260.0) &  (original description: no original description)","protein_coding"
"MA_646g0010","No alias","Picea abies","(at4g39420 : 917.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf; EXPRESSED DURING: LP.04 four leaves visible, LP.02 two leaves visible; Has 20 Blast hits to 19 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1834.0) &  (original description: no original description)","protein_coding"
"MA_7515g0010","No alias","Picea abies","(at5g20610 : 510.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26160.1); Has 918 Blast hits to 759 proteins in 180 species: Archae - 6; Bacteria - 105; Metazoa - 264; Fungi - 89; Plants - 167; Viruses - 5; Other Eukaryotes - 282 (source: NCBI BLink). & (reliability: 1020.0) &  (original description: no original description)","protein_coding"
"MA_76149g0010","No alias","Picea abies","(at1g19440 : 784.0) Encodes KCS4, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).; 3-ketoacyl-CoA synthase 4 (KCS4); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; INVOLVED IN: very long-chain fatty acid metabolic process, cuticle development; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 9 (TAIR:AT2G16280.1); Has 4090 Blast hits to 4073 proteins in 972 species: Archae - 0; Bacteria - 1351; Metazoa - 0; Fungi - 9; Plants - 2623; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (reliability: 1568.0) &  (original description: no original description)","protein_coding"
"MA_99496g0010","No alias","Picea abies","(at5g48390 : 641.0) Defective in meiotic chromosome segregation. It is involved in crossover formation and involved in both male and female meiosis.; ATZIP4; FUNCTIONS IN: binding; INVOLVED IN: female meiosis, resolution of meiotic recombination intermediates, male meiosis; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Meiosis specific protein SPO22 (InterPro:IPR013940), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1282.0) &  (original description: no original description)","protein_coding"
"Mp1g01420.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g04380.1","No alias","Marchantia polymorpha","p24-delta COPI trafficking regulator protein","protein_coding"
"Mp1g04800.1","No alias","Marchantia polymorpha","eIF2-regulatory factor (eIF5C)","protein_coding"
"Mp1g05920.1","No alias","Marchantia polymorpha","Hsp60-co-chaperone (Hsp10)","protein_coding"
"Mp1g21100.1","No alias","Marchantia polymorpha","component mtRPL22 of large ribosomal subunit proteome","protein_coding"
"Mp1g26630.1","No alias","Marchantia polymorpha","catalytic component of isocitrate dehydrogenase heterodimer","protein_coding"
"Mp2g00100.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp2g15410.1","No alias","Marchantia polymorpha","peptidyl-prolyl isomerase","protein_coding"
"Mp3g00060.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp3g05090.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp3g06090.1","No alias","Marchantia polymorpha","component PFD6 of Prefoldin co-chaperone complex","protein_coding"
"Mp3g07490.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp3g13470.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp3g13580.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp3g15640.1","No alias","Marchantia polymorpha","component MIP1 of DSL1 (Depends-on-SLY1) complex","protein_coding"
"Mp3g22790.1","No alias","Marchantia polymorpha","KDO-8-phosphate synthase","protein_coding"
"Mp3g24610.1","No alias","Marchantia polymorpha","ARL2 tubulin folding cofactor of post-CCT Tubulin folding pathway. ARF-GTPase","protein_coding"
"Mp3g24620.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp4g03900.1","No alias","Marchantia polymorpha","RNA helicase component MTR4/HEN2 of Nuclear Exosome Targeting (NEXT) activation complex","protein_coding"
"Mp4g05500.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp4g08820.1","No alias","Marchantia polymorpha","subunit G of V-type ATPase peripheral V1 subcomplex","protein_coding"
"Mp4g09120.1","No alias","Marchantia polymorpha","RUB ligase E3 protein (RBX1). UBQ-E2-recruiting component RBX1 of SKP1-CUL1-FBX (SCF) E3 ligase complexes","protein_coding"
"Mp4g10140.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp4g10380.1","No alias","Marchantia polymorpha","Protein FIP1 OS=Arabidopsis thaliana (sp|q8s8k9|frip1_arath : 248.0)","protein_coding"
"Mp4g11150.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp4g13870.1","No alias","Marchantia polymorpha","Peroxidase 39 OS=Arabidopsis thaliana (sp|q9sut2|per39_arath : 265.0)","protein_coding"
"Mp4g15020.1","No alias","Marchantia polymorpha","component NDUFA8 of NADH dehydrogenase alpha subcomplex","protein_coding"
"Mp4g20260.1","No alias","Marchantia polymorpha","catalytic component of Katanin ATP-dependent microtubule severing complex","protein_coding"
"Mp5g13420.1","No alias","Marchantia polymorpha","meiotic crossover accessory protein (SPO22/ZIP4)","protein_coding"
"Mp5g13520.1","No alias","Marchantia polymorpha","component Magoh of RNA quality control Exon Junction complex","protein_coding"
"Mp5g18070.1","No alias","Marchantia polymorpha","regulatory component RPN10 of 26S proteasome","protein_coding"
"Mp5g22270.1","No alias","Marchantia polymorpha","carrier protein CIA2/AE7 of cytosolic CIA system transfer phase","protein_coding"
"Mp5g24510.1","No alias","Marchantia polymorpha","ATP-dependent Clp protease proteolytic subunit 2, mitochondrial OS=Arabidopsis thaliana (sp|q9fn42|clpp2_arath : 288.0)","protein_coding"
"Mp6g02330.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp6g05780.1","No alias","Marchantia polymorpha","ATP-dependent DNA helicase Q-like 5 OS=Arabidopsis thaliana (sp|q0wvw7|rql5_arath : 606.0)","protein_coding"
"Mp6g09610.1","No alias","Marchantia polymorpha","small subunit sigma of AP-4 vacuole cargo adaptor complex","protein_coding"
"Mp6g14010.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp6g17750.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp7g02310.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp7g10530.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp7g17170.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp7g17490.1","No alias","Marchantia polymorpha","center kinetochore protein (Mis12)","protein_coding"
"Mp8g00070.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp8g09660.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Potri.002G223600","No alias","Populus trichocarpa","centromere/kinetochore protein, putative (ZW10)","protein_coding"
"Potri.014G175350","No alias","Populus trichocarpa","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Potri.015G055500","No alias","Populus trichocarpa","minichromosome instability 12 (mis12)-like","protein_coding"
"Pp1s102_150V6","No alias","Physcomitrella patens","set domain protein","protein_coding"
"Pp1s104_158V6","No alias","Physcomitrella patens","T27K22.22; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s114_23V6","No alias","Physcomitrella patens","MJK13.21; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s120_78V6","No alias","Physcomitrella patens","ankyrin repeat family protein","protein_coding"
"Pp1s127_45V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s130_202V6","No alias","Physcomitrella patens","dna repair protein","protein_coding"
"Pp1s132_178V6","No alias","Physcomitrella patens","pseudouridine synthase","protein_coding"
"Pp1s133_127V6","No alias","Physcomitrella patens","af410337_1 at2g25920","protein_coding"
"Pp1s13_123V6","No alias","Physcomitrella patens","T3F17.25; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s13_12V6","No alias","Physcomitrella patens","T16L4.30; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s149_14V6","No alias","Physcomitrella patens","mediator complex subunit soh1","protein_coding"
"Pp1s14_259V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s14_331V6","No alias","Physcomitrella patens","T16B24.14; patatin family protein [Arabidopsis thaliana]","protein_coding"
"Pp1s14_363V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s158_52V6","No alias","Physcomitrella patens","spotted leaf","protein_coding"
"Pp1s164_13V6","No alias","Physcomitrella patens","Uro-adherence factor A precursor [no tax name]","protein_coding"
"Pp1s164_9V6","No alias","Physcomitrella patens","T22P22.90; glycine-rich protein [Arabidopsis thaliana]","protein_coding"
"Pp1s172_17V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s177_40V6","No alias","Physcomitrella patens","atp binding","protein_coding"
"Pp1s180_118V6","No alias","Physcomitrella patens","FCAALL.334; tRNA-splicing endonuclease positive effector-related [Arabidopsis thaliana]","protein_coding"
"Pp1s185_102V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s188_47V6","No alias","Physcomitrella patens","sigma factor sigb regulation protein rsbq","protein_coding"
"Pp1s19_294V6","No alias","Physcomitrella patens","atp binding","protein_coding"
"Pp1s1_781V6","No alias","Physcomitrella patens","centromere kinetochore protein zw10","protein_coding"
"Pp1s20_106V6","No alias","Physcomitrella patens","hypothetical protein [Oryza sativa (japonica cultivar-group)]","protein_coding"
"Pp1s212_111V6","No alias","Physcomitrella patens","MBM17.11; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s213_28V6","No alias","Physcomitrella patens","trna 2 -phosphotransferase 1","protein_coding"
"Pp1s214_74V6","No alias","Physcomitrella patens","alpha beta hydrolase fold","protein_coding"
"Pp1s222_125V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s225_90V6","No alias","Physcomitrella patens","MZN14.22; protein kinase, putative [Arabidopsis thaliana]","protein_coding"
"Pp1s226_36V6","No alias","Physcomitrella patens","MJE7.2; tetratricopeptide repeat (TPR)-containing protein [Arabidopsis thaliana]","protein_coding"
"Pp1s233_64V6","No alias","Physcomitrella patens","MXC17.7; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s234_17V6","No alias","Physcomitrella patens","tubulin gamma chain","protein_coding"
"Pp1s249_6V6","No alias","Physcomitrella patens","yip1 domain family member 1","protein_coding"
"Pp1s24_79V6","No alias","Physcomitrella patens","sentrin sumo-specific","protein_coding"
"Pp1s252_49V6","No alias","Physcomitrella patens","histidine kinase cytokinin receptor","protein_coding"
"Pp1s30_96V6","No alias","Physcomitrella patens","MOK9.12; hypothetical protein [Arabidopsis thaliana]","protein_coding"
"Pp1s31_392V6","No alias","Physcomitrella patens","stress-induced protein sti1-like protein","protein_coding"
"Pp1s31_393V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s326_70V6","No alias","Physcomitrella patens","F18N11.160; exostosin family protein [Arabidopsis thaliana]","protein_coding"
"Pp1s33_315V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s34_90V6","No alias","Physcomitrella patens","M4E13.100; bZIP transcription factor family protein [Arabidopsis thaliana]","protein_coding"
"Pp1s36_177V6","No alias","Physcomitrella patens","contains ESTs C22366(C11876),C22365(C11876) [Oryza sativa (japonica cultivar-group)]","protein_coding"
"Pp1s3_117V6","No alias","Physcomitrella patens","Prp2; proline rich protein 2 [Mus musculus]","protein_coding"
"Pp1s41_55V6","No alias","Physcomitrella patens","tripartite motif-containing protein 16 (estrogen-responsive b box protein)","protein_coding"
"Pp1s425_16V6","No alias","Physcomitrella patens","acid phosphatase survival protein","protein_coding"
"Pp1s462_5V6","No alias","Physcomitrella patens","phospholipase d","protein_coding"
"Pp1s49_246V6","No alias","Physcomitrella patens","cystathionine gamma synthase","protein_coding"
"Pp1s49_40V6","No alias","Physcomitrella patens","plastid division regulator","protein_coding"
"Pp1s4_109V6","No alias","Physcomitrella patens","brassinosteroid insensitive 1-associated receptor kinase 1","protein_coding"
"Pp1s50_56V6","No alias","Physcomitrella patens","fad dependent oxidoreductase","protein_coding"
"Pp1s54_182V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s54_272V6","No alias","Physcomitrella patens","Qb-SNARE, Sec20-family","protein_coding"
"Pp1s55_244V6","No alias","Physcomitrella patens","F15G16.190; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s57_64V6","No alias","Physcomitrella patens","F24B22.250; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s5_196V6","No alias","Physcomitrella patens","F7F23.4; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s60_281V6","No alias","Physcomitrella patens","K2N11.1; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s66_284V6","No alias","Physcomitrella patens","haloacid dehalogenase-like hydrolase-like","protein_coding"
"Pp1s68_152V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s68_36V6","No alias","Physcomitrella patens","at5g13610 msh12_7","protein_coding"
"Pp1s70_213V6","No alias","Physcomitrella patens","F9P14.6; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s75_172V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s76_183V6","No alias","Physcomitrella patens","set domain protein","protein_coding"
"Pp1s78_6V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s794_2V6","No alias","Physcomitrella patens","serine threonine-protein kinase","protein_coding"
"Pp1s7_40V6","No alias","Physcomitrella patens","F7A10.13; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s7_472V6","No alias","Physcomitrella patens","ap2 erf domain-containing transcription factor","protein_coding"
"Pp1s7_53V6","No alias","Physcomitrella patens","T1P2.13; glycosyl hydrolase family 17 protein [Arabidopsis thaliana]","protein_coding"
"Pp1s83_118V6","No alias","Physcomitrella patens","vacuolar atp synthase subunit g","protein_coding"
"Pp1s84_199V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s84_49V6","No alias","Physcomitrella patens","protein phosphatases pp1 regulatory","protein_coding"
"Pp1s90_74V6","No alias","Physcomitrella patens","T24C20.80; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s93_58V6","No alias","Physcomitrella patens","F12A12.30; armadillo/beta-catenin repeat family protein / U-box domain-containing family protein [Arabidopsis thaliana]","protein_coding"
"Pp1s93_66V6","No alias","Physcomitrella patens","dna helicase","protein_coding"
"Pp1s94_20V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s96_127V6","No alias","Physcomitrella patens","esterase lipase thioesterase family protein","protein_coding"
"Pp1s98_44V6","No alias","Physcomitrella patens","F17L21.13; F-box family protein [Arabidopsis thaliana]","protein_coding"
"PSME_00000062-RA","No alias","Pseudotsuga menziesii","(at4g35550 : 90.1) Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. WOX13 is the only family member that does not contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box.; WUSCHEL related homeobox 13 (WOX13); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 14 (TAIR:AT1G20700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 180.2) &  (original description: no original description)","protein_coding"
"PSME_00000072-RA","No alias","Pseudotsuga menziesii","(at5g10480 : 294.0) Protein tyrosine phosphatase-like involved in cell division and differentiation. Interacts with CDKA;1 only in its phosphorylated form, preventing dephosphorylation. Overexpression slowed down cell division in suspension cell cultures at the G2-to-M transition and early  mitosis and inhibited Arabidopsis seedling growth. Localized in  the cytoplasm of dividing cells but moved into the nucleus upon cell differentiation. Based on complementation of yeast mutant PAS2 has acyl-CoA dehydratase activity. It interacts with CER10, a component of the microsomal fatty acid elongase complex, suggesting a role in synthesis of VLCFAs (very long chain fatty acids).; PASTICCINO 2 (PAS2); CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase-like, PTPLA (InterPro:IPR007482); BEST Arabidopsis thaliana protein match is: Protein-tyrosine phosphatase-like, PTPLA (TAIR:AT5G59770.1). & (reliability: 588.0) &  (original description: no original description)","protein_coding"
"PSME_00000317-RA","No alias","Pseudotsuga menziesii","(at1g55850 : 558.0) encodes a protein similar to cellulose synthase; cellulose synthase like E1 (CSLE1); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: plant-type cell wall biogenesis, cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase like G2 (TAIR:AT4G24000.1); Has 2588 Blast hits to 1976 proteins in 305 species: Archae - 7; Bacteria - 382; Metazoa - 5; Fungi - 13; Plants - 2129; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (reliability: 1116.0) &  (original description: no original description)","protein_coding"
"PSME_00000428-RA","No alias","Pseudotsuga menziesii","(at1g06340 : 90.9) Plant Tudor-like protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), Agenet (InterPro:IPR008395); BEST Arabidopsis thaliana protein match is: agenet domain-containing protein (TAIR:AT1G09320.1); Has 263 Blast hits to 216 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 260; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 181.8) &  (original description: no original description)","protein_coding"
"PSME_00000916-RA","No alias","Pseudotsuga menziesii","(at5g64200 : 128.0) encodes an SC35-like splicing factor of 35 kD localized to the nuclear specks.; ortholog of human splicing factor SC35 (SC35); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome, RNA splicing; LOCATED IN: cytosol, nuclear speck, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: SC35-like splicing factor 30A (TAIR:AT3G13570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 256.0) &  (original description: no original description)","protein_coding"
"PSME_00000955-RA","No alias","Pseudotsuga menziesii","(at4g24740 : 533.0) a LAMMER-type protein kinase that co-precipitates with serine/arginine-rich (SR) proteins in vitro, interaction modulated by phosphorylation of the proteins.; FUS3-complementing gene 2 (FC2); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: FUS3-complementing gene 1 (TAIR:AT3G53570.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q40353|mmk2_medsa : 102.0) Mitogen-activated protein kinase homolog MMK2 (EC 2.7.11.24) - Medicago sativa (Alfalfa) & (reliability: 1066.0) &  (original description: no original description)","protein_coding"
"PSME_00001055-RA","No alias","Pseudotsuga menziesii","(q43207|fkb70_wheat : 764.0) 70 kDa peptidyl-prolyl isomerase (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) - Triticum aestivum (Wheat) & (at3g25230 : 746.0) Encodes a a high molecular weight member of the FK506 binding protein (FKBP) family.  It has three FKBP12-like domains, tetratricopeptide repeats, and a putative calmodulin binding domain. Modulates thermotolerance by interacting with HSP90.1 and affecting the accumulation of HsfA2-regulated sHSPs.; rotamase FKBP 1 (ROF1); CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FKBP-type peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT5G48570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1492.0) &  (original description: no original description)","protein_coding"
"PSME_00001198-RA","No alias","Pseudotsuga menziesii",""(at5g36120 : 130.0) ""cofactor assembly, complex C (B6F)"" (CCB3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cytochrome b6f complex assembly; LOCATED IN: chloroplast thylakoid membrane, chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function YGGT (InterPro:IPR003425); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 260.0) &  (original description: no original description)"","protein_coding"
"PSME_00001676-RA","No alias","Pseudotsuga menziesii","(at4g16110 : 198.0) Encodes a pollen-specific transcription factor involved in the expression of nuclear genes for components of mitochondrial complex I in Arabidopsis. Acts in concert with other type-B ARRs in the cytokinin signaling pathway. AHK3 mediates cytokinin-induced phosphorylation of ARR2 on the Asp-80 residue. This phosphorylation plays a positive role of ARR2 in cytokinin-mediated control of leaf longevity.; response regulator 2 (RR2); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Signal transduction response regulator, receiver domain (InterPro:IPR001789), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: response regulator 1 (TAIR:AT3G16857.2); Has 95443 Blast hits to 94483 proteins in 2985 species: Archae - 623; Bacteria - 84652; Metazoa - 47; Fungi - 382; Plants - 2721; Viruses - 2; Other Eukaryotes - 7016 (source: NCBI BLink). & (reliability: 380.0) &  (original description: no original description)","protein_coding"
"PSME_00001953-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00002216-RA","No alias","Pseudotsuga menziesii","(at1g48920 : 154.0) Encodes ATNUC-L1 (NUCLEOLIN LIKE 1), the predominant form of the two nucleolin proteins found in Arabidopsis. This protein is involved in rRNA processing, ribosome biosynthesis, and vascular pattern formation. PARL1 localizes to the nucleolus and parl1 mutants accumulate elevated levels of the unspliced 35S pre-rRNA. parl1 mutants also have defects in cotyledon, leaf, sepal, and petal vein patterning and have reduced stature, reduced fertility, increased bushiness, and reduced root length. The sugar-induced expression of ribosome proteins is also reduced in parl1 mutants.; nucleolin like 1 (NUC-L1); FUNCTIONS IN: nucleotide binding, nucleic acid binding; INVOLVED IN: in 12 processes; LOCATED IN: nucleolus; EXPRESSED IN: 33 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: nucleolin like 2 (TAIR:AT3G18610.1); Has 233653 Blast hits to 109332 proteins in 3530 species: Archae - 628; Bacteria - 50205; Metazoa - 82232; Fungi - 34500; Plants - 18462; Viruses - 1662; Other Eukaryotes - 45964 (source: NCBI BLink). & (reliability: 308.0) &  (original description: no original description)","protein_coding"
"PSME_00002240-RA","No alias","Pseudotsuga menziesii","(at5g02050 : 153.0) Mitochondrial glycoprotein family protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, mitochondrial matrix; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial glycoprotein (InterPro:IPR003428); BEST Arabidopsis thaliana protein match is: Mitochondrial glycoprotein family protein (TAIR:AT3G55605.1); Has 498 Blast hits to 497 proteins in 162 species: Archae - 0; Bacteria - 2; Metazoa - 46; Fungi - 134; Plants - 219; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). & (reliability: 306.0) &  (original description: no original description)","protein_coding"
"PSME_00002336-RA","No alias","Pseudotsuga menziesii","(p48534|apx1_pea : 290.0) L-ascorbate peroxidase, cytosolic (EC 1.11.1.11) (AP) (PsAPx01) - Pisum sativum (Garden pea) & (at1g07890 : 279.0) Encodes a cytosolic ascorbate peroxidase APX1.  Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells.  Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms. At least part of the induction of heat shock proteins during light stress in Arabidopsis is mediated by H2O2 that is scavenged by APX1. Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.; ascorbate peroxidase 1 (APX1); FUNCTIONS IN: L-ascorbate peroxidase activity; INVOLVED IN: response to reactive oxygen species, response to salt stress, response to heat, hydrogen peroxide catabolic process, embryo development ending in seed dormancy; LOCATED IN: cytosol, chloroplast, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant ascorbate peroxidase (InterPro:IPR002207), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: ascorbate peroxidase 2 (TAIR:AT3G09640.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 558.0) &  (original description: no original description)","protein_coding"
"PSME_00002360-RA","No alias","Pseudotsuga menziesii","(at2g32090 : 168.0) Lactoylglutathione lyase / glyoxalase I family protein; BEST Arabidopsis thaliana protein match is: Lactoylglutathione lyase / glyoxalase I family protein (TAIR:AT2G28420.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 336.0) &  (original description: no original description)","protein_coding"
"PSME_00002367-RA","No alias","Pseudotsuga menziesii","(at3g14200 : 133.0) Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT1G72416.2); Has 21914 Blast hits to 21906 proteins in 3169 species: Archae - 155; Bacteria - 8965; Metazoa - 3686; Fungi - 1997; Plants - 2132; Viruses - 13; Other Eukaryotes - 4966 (source: NCBI BLink). & (reliability: 266.0) &  (original description: no original description)","protein_coding"
"PSME_00002374-RA","No alias","Pseudotsuga menziesii","(at4g16660 : 984.0) heat shock protein 70 (Hsp 70) family protein; FUNCTIONS IN: ATP binding; LOCATED IN: plasma membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 70 (Hsp 70) family protein (TAIR:AT1G11660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q03685|bip5_tobac : 220.0) Luminal-binding protein 5 precursor (BiP 5) (78 kDa glucose-regulated protein homolog 5) (GRP 78-5) - Nicotiana tabacum (Common tobacco) & (reliability: 1968.0) &  (original description: no original description)","protein_coding"
"PSME_00002395-RA","No alias","Pseudotsuga menziesii","(q40731|stad_orysa : 468.0) Acyl-[acyl-carrier-protein] desaturase, chloroplast precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) - Oryza sativa (Rice) & (at2g43710 : 461.0) Encodes a stearoyl-ACP desaturase, involved in fatty acid desaturation. The ssi2 mutants have increased 18:0 and reduced 18:1 fatty acids. Exogenous application of glycerol to wild type plants mimics the ssi2 mutant phenotype. The altered 18:1 fatty acid content in the ssi2 mutants has an impact on SA- and JA-mediated defense signaling. ssi2 mutants resulted in hyper-resistance to green peach aphid and antibiosis activity in petiole exudates.; SSI2; FUNCTIONS IN: acyl-[acyl-carrier-protein] desaturase activity, stearoyl-CoA 9-desaturase activity; INVOLVED IN: in 10 processes; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase-related (InterPro:IPR012348), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078), Fatty acid desaturase, type 2 (InterPro:IPR005067), Stearoyl-ACP desaturase, conserved site (InterPro:IPR005803); BEST Arabidopsis thaliana protein match is: Plant stearoyl-acyl-carrier-protein desaturase family protein (TAIR:AT3G02630.1); Has 946 Blast hits to 938 proteins in 221 species: Archae - 0; Bacteria - 436; Metazoa - 2; Fungi - 0; Plants - 450; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 922.0) &  (original description: no original description)","protein_coding"
"PSME_00002755-RA","No alias","Pseudotsuga menziesii","(at5g47520 : 316.0) RAB GTPase homolog A5A (RABA5a); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A5D (TAIR:AT2G31680.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q40193|rb11c_lotja : 246.0) Ras-related protein Rab11C - Lotus japonicus & (reliability: 632.0) &  (original description: no original description)","protein_coding"
"PSME_00003479-RA","No alias","Pseudotsuga menziesii","(at3g63400 : 242.0) Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding, RNA splicing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT2G21130.1). & (q39613|cyph_catro : 210.0) Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 484.0) &  (original description: no original description)","protein_coding"
"PSME_00003583-RA","No alias","Pseudotsuga menziesii","(at2g46225 : 164.0) Encodes a subunit of the WAVE complex. The WAVE complex is required for activation of ARP2/3 complex which functions in actin microfilament nucleation and branching.  One of four ABI-like proteins.; ABI-1-like 1 (ABIL1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: actin nucleation, trichome morphogenesis; LOCATED IN: SCAR complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: ABL interactor-like protein 3 (TAIR:AT5G24310.1). & (q9axa6|abil1_orysa : 153.0) Probable protein ABIL1 (Abl interactor-like protein 1) - Oryza sativa (Rice) & (reliability: 328.0) &  (original description: no original description)","protein_coding"
"PSME_00003911-RA","No alias","Pseudotsuga menziesii","(at3g59030 : 561.0) Encodes a proton antiporter. Involved in the transportation of proanthocyanidin precursors into the vacuole. In vitro transport experiments showed that cyanidin-3-O-glucoside (anthocyanin) was an effective substrate, whereas the proanthocyanidin precursor epicatechin was not transported. However catechin-3-O-glucoside inhibited anthocyanin transport in a dose-dependent manner suggesting that glycosylated epicatechin is the in vivo substrate. Recessive mutation has strong reduction of proanthocyanidin deposition in vacuoles and has reduced dormancy. Expressed in the endothelium of ovules and developing seeds.; TRANSPARENT TESTA 12 (TT12); CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT3G21690.1); Has 8592 Blast hits to 8553 proteins in 1935 species: Archae - 188; Bacteria - 5730; Metazoa - 144; Fungi - 324; Plants - 1347; Viruses - 0; Other Eukaryotes - 859 (source: NCBI BLink). & (reliability: 1122.0) &  (original description: no original description)","protein_coding"
"PSME_00004038-RA","No alias","Pseudotsuga menziesii","(at1g75660 : 1056.0) Encodes a protein with similarity to yeast 5'-3'exonucleases and can functionally complement the yeast mutations. In Arabidopsis XRN3 acts as a suppressor of posttranscriptional gene silencing. Mutants accumulate excised miRNA products suggesting that XRN3 is involved in degradation of these products.; 5'-3' exoribonuclease 3 (XRN3); CONTAINS InterPro DOMAIN/s: 5'-3' exoribonuclease 2 (InterPro:IPR017151), Zinc finger, CCHC-type (InterPro:IPR001878), Putative 5-3 exonuclease (InterPro:IPR004859); BEST Arabidopsis thaliana protein match is: exoribonuclease 2 (TAIR:AT5G42540.1); Has 4264 Blast hits to 3505 proteins in 442 species: Archae - 2; Bacteria - 295; Metazoa - 1361; Fungi - 725; Plants - 751; Viruses - 31; Other Eukaryotes - 1099 (source: NCBI BLink). & (reliability: 2112.0) &  (original description: no original description)","protein_coding"
"PSME_00004073-RA","No alias","Pseudotsuga menziesii","(at5g45030 : 429.0) Trypsin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003); BEST Arabidopsis thaliana protein match is: Trypsin family protein (TAIR:AT2G35155.1); Has 134 Blast hits to 134 proteins in 31 species: Archae - 0; Bacteria - 55; Metazoa - 0; Fungi - 0; Plants - 79; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 858.0) &  (original description: no original description)","protein_coding"
"PSME_00004225-RA","No alias","Pseudotsuga menziesii","(at3g62310 : 1190.0) RNA helicase family protein; FUNCTIONS IN: RNA helicase activity, helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase family protein (TAIR:AT2G47250.1); Has 10517 Blast hits to 9531 proteins in 1639 species: Archae - 4; Bacteria - 3473; Metazoa - 2472; Fungi - 1291; Plants - 883; Viruses - 640; Other Eukaryotes - 1754 (source: NCBI BLink). & (reliability: 2380.0) &  (original description: no original description)","protein_coding"
"PSME_00004770-RA","No alias","Pseudotsuga menziesii","(at5g01720 : 545.0) RNI-like superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT5G27920.1); Has 15959 Blast hits to 6468 proteins in 357 species: Archae - 0; Bacteria - 920; Metazoa - 6194; Fungi - 1434; Plants - 4975; Viruses - 16; Other Eukaryotes - 2420 (source: NCBI BLink). & (reliability: 1090.0) &  (original description: no original description)","protein_coding"
"PSME_00005243-RA","No alias","Pseudotsuga menziesii","(at5g58250 : 210.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2488 (InterPro:IPR019616); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 420.0) &  (original description: no original description)","protein_coding"
"PSME_00005878-RA","No alias","Pseudotsuga menziesii","(at1g32360 : 258.0) Zinc finger (CCCH-type) family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT2G35430.1); Has 13421 Blast hits to 5509 proteins in 634 species: Archae - 13; Bacteria - 2784; Metazoa - 4906; Fungi - 574; Plants - 3348; Viruses - 263; Other Eukaryotes - 1533 (source: NCBI BLink). & (reliability: 516.0) &  (original description: no original description)","protein_coding"
"PSME_00005939-RA","No alias","Pseudotsuga menziesii","(q39817|calx_soybn : 703.0) Calnexin homolog precursor - Glycine max (Soybean) & (at5g61790 : 685.0) calnexin 1 (CNX1); FUNCTIONS IN: unfolded protein binding, calcium ion binding; INVOLVED IN: protein folding; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Calreticulin/calnexin, P (InterPro:IPR009033), Calreticulin/calnexin (InterPro:IPR001580), Calreticulin/calnexin, conserved site (InterPro:IPR018124), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320); BEST Arabidopsis thaliana protein match is: Calreticulin family protein (TAIR:AT5G07340.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1370.0) &  (original description: no original description)","protein_coding"
"PSME_00006289-RA","No alias","Pseudotsuga menziesii","(at4g25550 : 93.6) Cleavage/polyadenylation specificity factor, 25kDa subunit; CONTAINS InterPro DOMAIN/s: Cleavage/polyadenylation specificity factor, 25kDa subunit (InterPro:IPR016706); BEST Arabidopsis thaliana protein match is: homolog of CFIM-25 (TAIR:AT4G29820.1); Has 397 Blast hits to 397 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 171; Fungi - 88; Plants - 70; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink). & (reliability: 187.2) &  (original description: no original description)","protein_coding"
"PSME_00008316-RA","No alias","Pseudotsuga menziesii","(at5g09760 : 465.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, chloroplast, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G64640.1); Has 2807 Blast hits to 2761 proteins in 473 species: Archae - 6; Bacteria - 874; Metazoa - 1; Fungi - 174; Plants - 1725; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (q43062|pme_prupe : 314.0) Pectinesterase PPE8B precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Prunus persica (Peach) & (reliability: 930.0) &  (original description: no original description)","protein_coding"
"PSME_00008379-RA","No alias","Pseudotsuga menziesii","(at2g34750 : 231.0) RNA polymerase I specific transcription initiation factor RRN3 protein; FUNCTIONS IN: RNA polymerase I transcription factor activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase I specific transcription initiation factor RRN3 (InterPro:IPR007991); BEST Arabidopsis thaliana protein match is: RNA polymerase I specific transcription initiation factor RRN3 protein (TAIR:AT1G30590.1); Has 368 Blast hits to 356 proteins in 164 species: Archae - 0; Bacteria - 0; Metazoa - 124; Fungi - 131; Plants - 69; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (reliability: 462.0) &  (original description: no original description)","protein_coding"
"PSME_00008710-RA","No alias","Pseudotsuga menziesii","(q05046|ch62_cucma : 823.0) Chaperonin CPN60-2, mitochondrial precursor (HSP60-2) - Cucurbita maxima (Pumpkin) (Winter squash) & (at3g23990 : 822.0) mitochondrial chaperonin HSP. assist in  rapid assembly of the oligomeric protein structures in the mitochondria.; heat shock protein 60 (HSP60); FUNCTIONS IN: copper ion binding, ATP binding; INVOLVED IN: response to cadmium ion, response to cyclopentenone, chaperone-mediated protein complex assembly, response to heat, mitochondrion organization; LOCATED IN: cytosol, cytosolic ribosome, mitochondrion, plasma membrane, mitochondrial matrix; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperonin Cpn60, conserved site (InterPro:IPR018370), Chaperonin Cpn60 (InterPro:IPR001844); BEST Arabidopsis thaliana protein match is: heat shock protein 60-2 (TAIR:AT2G33210.1); Has 33706 Blast hits to 33652 proteins in 8680 species: Archae - 676; Bacteria - 21745; Metazoa - 1618; Fungi - 1515; Plants - 790; Viruses - 2; Other Eukaryotes - 7360 (source: NCBI BLink). & (reliability: 1644.0) &  (original description: no original description)","protein_coding"
"PSME_00008880-RA","No alias","Pseudotsuga menziesii","(at1g18010 : 551.0) Major facilitator superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transmembrane transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G18000.1); Has 758 Blast hits to 750 proteins in 174 species: Archae - 0; Bacteria - 91; Metazoa - 141; Fungi - 422; Plants - 82; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 1102.0) &  (original description: no original description)","protein_coding"
"PSME_00009037-RA","No alias","Pseudotsuga menziesii","(at4g27220 : 177.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT4G27190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 354.0) &  (original description: no original description)","protein_coding"
"PSME_00009318-RA","No alias","Pseudotsuga menziesii","(at5g60700 : 1051.0) glycosyltransferase family protein 2; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G12260.1); Has 216 Blast hits to 215 proteins in 74 species: Archae - 0; Bacteria - 15; Metazoa - 2; Fungi - 65; Plants - 77; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). & (reliability: 2102.0) &  (original description: no original description)","protein_coding"
"PSME_00009479-RA","No alias","Pseudotsuga menziesii","(at1g10030 : 120.0) homolog of yeast ergosterol28 (ERG28); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Erg28-like (InterPro:IPR005352); Has 223 Blast hits to 223 proteins in 105 species: Archae - 0; Bacteria - 0; Metazoa - 67; Fungi - 94; Plants - 48; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 240.0) &  (original description: no original description)","protein_coding"
"PSME_00009583-RA","No alias","Pseudotsuga menziesii","(at5g15940 : 254.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: sperm cell, pollen tube; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G04070.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 508.0) &  (original description: no original description)","protein_coding"
"PSME_00009871-RA","No alias","Pseudotsuga menziesii","(at4g31990 : 700.0) Encodes a plastid-localized aspartate aminotransferase.  Does not display any PAT (glutamate/aspartate-prephenate aminotransferase) activity even in the presence of a high concentration of prephenate.; aspartate aminotransferase 5 (ASP5); CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Aspartate/other aminotransferase (InterPro:IPR000796), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: aspartate aminotransferase 3 (TAIR:AT5G11520.1). & (p37833|aatc_orysa : 444.0) Aspartate aminotransferase, cytoplasmic (EC 2.6.1.1) (Transaminase A) - Oryza sativa (Rice) & (reliability: 1400.0) &  (original description: no original description)","protein_coding"
"PSME_00009972-RA","No alias","Pseudotsuga menziesii","(p34924|g3pc_pinsy : 598.0) Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (EC 1.2.1.12) - Pinus sylvestris (Scots pine) & (at1g13440 : 549.0) glyceraldehyde-3-phosphate dehydrogenase C2 (GAPC2); FUNCTIONS IN: copper ion binding, glyceraldehyde-3-phosphate dehydrogenase activity, zinc ion binding; INVOLVED IN: response to oxidative stress, response to cadmium ion, gluconeogenesis, defense response to bacterium, glycolysis; LOCATED IN: cytosol, mitochondrion, chloroplast, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde 3-phosphate dehydrogenase family (InterPro:IPR020831), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828); BEST Arabidopsis thaliana protein match is: glyceraldehyde-3-phosphate dehydrogenase C subunit 1 (TAIR:AT3G04120.1); Has 25183 Blast hits to 25173 proteins in 6340 species: Archae - 41; Bacteria - 10793; Metazoa - 2402; Fungi - 2843; Plants - 3866; Viruses - 0; Other Eukaryotes - 5238 (source: NCBI BLink). & (reliability: 1098.0) &  (original description: no original description)","protein_coding"
"PSME_00010183-RA","No alias","Pseudotsuga menziesii","(at3g55440 : 186.0) Encodes triosephosphate isomerase.; triosephosphate isomerase (TPI); FUNCTIONS IN: triose-phosphate isomerase activity, copper ion binding; INVOLVED IN: in 7 processes; LOCATED IN: in 8 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Triosephosphate isomerase, active site (InterPro:IPR020861), Aldolase-type TIM barrel (InterPro:IPR013785), Triosephosphate isomerase (InterPro:IPR000652); BEST Arabidopsis thaliana protein match is: triosephosphate isomerase (TAIR:AT2G21170.1); Has 11466 Blast hits to 11464 proteins in 3595 species: Archae - 48; Bacteria - 6204; Metazoa - 1205; Fungi - 243; Plants - 477; Viruses - 0; Other Eukaryotes - 3289 (source: NCBI BLink). & (p48495|tpis_pethy : 184.0) Triosephosphate isomerase, cytosolic (EC 5.3.1.1) (TIM) (Triose-phosphate isomerase) - Petunia hybrida (Petunia) & (reliability: 372.0) &  (original description: no original description)","protein_coding"
"PSME_00010658-RA","No alias","Pseudotsuga menziesii","(at5g53480 : 1164.0) ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus, docking; LOCATED IN: nucleus, chloroplast, nuclear pore, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G08947.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 2328.0) &  (original description: no original description)","protein_coding"
"PSME_00010668-RA","No alias","Pseudotsuga menziesii","(at4g10620 : 556.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G57180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q6ypg5|nos_orysa : 95.1) Putative nitric-oxide synthase (EC 1.14.13.39) - Oryza sativa (Rice) & (reliability: 1112.0) &  (original description: no original description)","protein_coding"
"PSME_00010732-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00010812-RA","No alias","Pseudotsuga menziesii","(p35016|enpl_catro : 974.0) Endoplasmin homolog precursor (GRP94 homolog) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at4g24190 : 949.0) encodes an ortholog of GRP94, an ER-resident HSP90-like protein and is involved in regulation of meristem size and organization. Single and double mutant analyses suggest that SHD may be required for the correct folding and/or complex formation of CLV proteins. Lines carrying recessive mutations in this locus exhibits expanded shoot meristems, disorganized root meristems, and defective pollen tube elongation. Transcript is detected in all tissues examined and is not induced by heat.  Endoplasmin supports the protein secretory pathway and has a role in proliferating tissues.; SHEPHERD (SHD); FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: in 8 processes; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Chaperone protein htpG (InterPro:IPR001404), Heat shock protein Hsp90, C-terminal (InterPro:IPR020576), Heat shock protein Hsp90, N-terminal (InterPro:IPR020575), Molecular chaperone, heat shock protein, endoplasmin (InterPro:IPR015566), ATPase-like, ATP-binding domain (InterPro:IPR003594), Heat shock protein Hsp90, conserved site (InterPro:IPR019805), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); BEST Arabidopsis thaliana protein match is: heat shock protein 90.1 (TAIR:AT5G52640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1898.0) &  (original description: no original description)","protein_coding"
"PSME_00010878-RA","No alias","Pseudotsuga menziesii","(at2g16850 : 428.0) plasma membrane intrinsic protein 2;8 (PIP2;8); FUNCTIONS IN: water channel activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: root, flower, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 3 (TAIR:AT4G35100.2); Has 11009 Blast hits to 10999 proteins in 2241 species: Archae - 81; Bacteria - 5232; Metazoa - 1475; Fungi - 457; Plants - 2523; Viruses - 2; Other Eukaryotes - 1239 (source: NCBI BLink). & (q8h5n9|pip21_orysa : 422.0) Probable aquaporin PIP2.1 (Plasma membrane intrinsic protein 2a) (PIP2a) (OsPIP2.1) - Oryza sativa (Rice) & (reliability: 856.0) &  (original description: no original description)","protein_coding"
"PSME_00011075-RA","No alias","Pseudotsuga menziesii","(q05046|ch62_cucma : 883.0) Chaperonin CPN60-2, mitochondrial precursor (HSP60-2) - Cucurbita maxima (Pumpkin) (Winter squash) & (at3g23990 : 876.0) mitochondrial chaperonin HSP. assist in  rapid assembly of the oligomeric protein structures in the mitochondria.; heat shock protein 60 (HSP60); FUNCTIONS IN: copper ion binding, ATP binding; INVOLVED IN: response to cadmium ion, response to cyclopentenone, chaperone-mediated protein complex assembly, response to heat, mitochondrion organization; LOCATED IN: cytosol, cytosolic ribosome, mitochondrion, plasma membrane, mitochondrial matrix; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperonin Cpn60, conserved site (InterPro:IPR018370), Chaperonin Cpn60 (InterPro:IPR001844); BEST Arabidopsis thaliana protein match is: heat shock protein 60-2 (TAIR:AT2G33210.1); Has 33706 Blast hits to 33652 proteins in 8680 species: Archae - 676; Bacteria - 21745; Metazoa - 1618; Fungi - 1515; Plants - 790; Viruses - 2; Other Eukaryotes - 7360 (source: NCBI BLink). & (reliability: 1752.0) &  (original description: no original description)","protein_coding"
"PSME_00011278-RA","No alias","Pseudotsuga menziesii","(p46285|s17p_wheat : 582.0) Sedoheptulose-1,7-bisphosphatase, chloroplast precursor (EC 3.1.3.37) (Sedoheptulose-bisphosphatase) (SBPase) (SED(1,7)P2ase) - Triticum aestivum (Wheat) & (at3g55800 : 581.0) Encodes the chloroplast enzyme sedoheptulose-1,7-bisphosphatase (SBPase), involved in the carbon reduction of the Calvin cycle. Increase in SBPase activity in transgenic lines accumulate up to 50% more sucrose and starch than wild-type.; sedoheptulose-bisphosphatase (SBPASE); FUNCTIONS IN: sedoheptulose-bisphosphatase activity, phosphoric ester hydrolase activity; INVOLVED IN: in 6 processes; LOCATED IN: thylakoid, apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Fructose-1,6-bisphosphatase, active site (InterPro:IPR020548), Fructose-1,6-bisphosphatase (InterPro:IPR000146); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT1G43670.1); Has 3745 Blast hits to 3741 proteins in 1296 species: Archae - 47; Bacteria - 2318; Metazoa - 373; Fungi - 154; Plants - 424; Viruses - 0; Other Eukaryotes - 429 (source: NCBI BLink). & (reliability: 1162.0) &  (original description: no original description)","protein_coding"
"PSME_00011491-RA","No alias","Pseudotsuga menziesii","(at1g78600 : 217.0) light-regulated zinc finger protein 1 (LZF1); CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box zinc finger family protein (TAIR:AT1G06040.1). & (reliability: 434.0) &  (original description: no original description)","protein_coding"
"PSME_00011559-RA","No alias","Pseudotsuga menziesii","(at1g25280 : 514.0) Member of TLP family; tubby like protein 10 (TLP10); FUNCTIONS IN: phosphoric diester hydrolase activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tubby, C-terminal, conserved site (InterPro:IPR018066), Tubby, C-terminal (InterPro:IPR000007); BEST Arabidopsis thaliana protein match is: tubby like protein 5 (TAIR:AT1G43640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1028.0) &  (original description: no original description)","protein_coding"
"PSME_00012816-RA","No alias","Pseudotsuga menziesii","(at4g35300 : 578.0) tonoplast monosaccharide transporter2 (TMT2); CONTAINS InterPro DOMAIN/s: Sugar/inositol transporter (InterPro:IPR003663), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: tonoplast monosaccharide transporter3 (TAIR:AT3G51490.2). & (q10710|sta_ricco : 90.1) Sugar carrier protein A - Ricinus communis (Castor bean) & (reliability: 1156.0) &  (original description: no original description)","protein_coding"
"PSME_00013990-RA","No alias","Pseudotsuga menziesii","(at4g39400 : 576.0) Encodes a plasma membrane localized leucine-rich repeat receptor kinase involved in brassinosteroid signal transduction. BRI1 ligand is brassinolide which binds at the extracellular domain. Binding results in phosphorylation of the kinase domain which activates the BRI1 protein leading to BR responses. Residue T-1049 and either S-1044 or T-1045 were essential for kinase function in vitro and normal BRI1 signaling in planta. Although BAK1 and BRI1 alone localize in the plasma membrane, when BAK1 and BRI1 are coexpressed, the heterodimer BAK1/BRI1 they form is localized in the endosome. BRI1 appears to be involved in the autonomous pathway that regulates the transition to flowering, primarily through its effects on FLC expression levels, as uncovered by double mutant analyses. This most likely occurs as a result of BRI1-dependent effects on histone acetylation, but not histone triMeH3K4 methylation, at the FLC locus.; BRASSINOSTEROID INSENSITIVE 1 (BRI1); FUNCTIONS IN: in 6 functions; INVOLVED IN: in 9 processes; LOCATED IN: endosome, plasma membrane, protein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: BRI1 like (TAIR:AT1G55610.2); Has 214988 Blast hits to 139206 proteins in 4645 species: Archae - 193; Bacteria - 21464; Metazoa - 65624; Fungi - 10774; Plants - 90532; Viruses - 410; Other Eukaryotes - 25991 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 289.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 1152.0) &  (original description: no original description)","protein_coding"
"PSME_00014265-RA","No alias","Pseudotsuga menziesii","(at3g62600 : 499.0) J domain protein localized in ER lumen. Can partially compensate for the growth defect in jem1 scj1 mutant yeast. Forms a complex SDF2-ERdj3B-BiP that is required for the proper accumulation of the surface-exposed leucine-rich repeat receptor kinases EFR.  EFR is involved in PAMP (pathogen associated molecular patterns) triggered immunity.; ATERDJ3B; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding, PAMP-induced immunity; LOCATED IN: plasma membrane, endoplasmic reticulum lumen; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT3G08910.1); Has 27934 Blast hits to 27869 proteins in 3473 species: Archae - 187; Bacteria - 10337; Metazoa - 4624; Fungi - 2578; Plants - 2760; Viruses - 17; Other Eukaryotes - 7431 (source: NCBI BLink). & (q04960|dnjh_cucsa : 183.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 998.0) &  (original description: no original description)","protein_coding"
"PSME_00014636-RA","No alias","Pseudotsuga menziesii","(at4g22910 : 610.0) FIZZY-related 2 (FZR2); FUNCTIONS IN: signal transducer activity; INVOLVED IN: trichome branching, signal transduction, DNA endoreduplication, cell growth; LOCATED IN: chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: cell cycle switch protein 52  A2 (TAIR:AT4G11920.1); Has 43458 Blast hits to 22953 proteins in 693 species: Archae - 46; Bacteria - 6865; Metazoa - 16440; Fungi - 9775; Plants - 5102; Viruses - 0; Other Eukaryotes - 5230 (source: NCBI BLink). & (reliability: 1206.0) &  (original description: no original description)","protein_coding"
"PSME_00014709-RA","No alias","Pseudotsuga menziesii","(at3g22660 : 204.0) rRNA processing protein-related; CONTAINS InterPro DOMAIN/s: Eukaryotic rRNA processing (InterPro:IPR008610); Has 1021 Blast hits to 939 proteins in 244 species: Archae - 0; Bacteria - 62; Metazoa - 355; Fungi - 209; Plants - 58; Viruses - 0; Other Eukaryotes - 337 (source: NCBI BLink). & (reliability: 408.0) &  (original description: no original description)","protein_coding"
"PSME_00014833-RA","No alias","Pseudotsuga menziesii","(at5g48390 : 619.0) Defective in meiotic chromosome segregation. It is involved in crossover formation and involved in both male and female meiosis.; ATZIP4; FUNCTIONS IN: binding; INVOLVED IN: female meiosis, resolution of meiotic recombination intermediates, male meiosis; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Meiosis specific protein SPO22 (InterPro:IPR013940), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1238.0) &  (original description: no original description)","protein_coding"
"PSME_00014954-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00015563-RA","No alias","Pseudotsuga menziesii","(at4g10110 : 132.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G18510.1); Has 3478 Blast hits to 3175 proteins in 382 species: Archae - 0; Bacteria - 389; Metazoa - 1438; Fungi - 566; Plants - 665; Viruses - 0; Other Eukaryotes - 420 (source: NCBI BLink). & (reliability: 264.0) &  (original description: no original description)","protein_coding"
"PSME_00015869-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00016281-RA","No alias","Pseudotsuga menziesii","(at5g37680 : 296.0) A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARL GTPases.; ADP-ribosylation factor-like A1A (ARLA1A); FUNCTIONS IN: GTP binding; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor-like A1D (TAIR:AT5G67560.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p51822|arf1_dauca : 109.0) ADP-ribosylation factor 1 - Daucus carota (Carrot) & (reliability: 592.0) &  (original description: no original description)","protein_coding"
"PSME_00016408-RA","No alias","Pseudotsuga menziesii","(at1g79930 : 1100.0) encodes high molecular weight heat shock protein 70 not a HSP90 homolog, mRNA is constitutively expressed but transiently induced after heat shock; heat shock protein 91 (HSP91); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to cadmium ion, response to heat; LOCATED IN: nucleus, plasma membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: Heat shock protein 70 (Hsp 70) family protein (TAIR:AT1G79920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p09189|hsp7c_pethy : 256.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (reliability: 2200.0) &  (original description: no original description)","protein_coding"
"PSME_00016865-RA","No alias","Pseudotsuga menziesii","(p22337|stad_ricco : 535.0) Acyl-[acyl-carrier-protein] desaturase, chloroplast precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) (Delta(9) stearoyl-acyl carrier protein desaturase) - Ricinus communis (Castor bean) & (at2g43710 : 530.0) Encodes a stearoyl-ACP desaturase, involved in fatty acid desaturation. The ssi2 mutants have increased 18:0 and reduced 18:1 fatty acids. Exogenous application of glycerol to wild type plants mimics the ssi2 mutant phenotype. The altered 18:1 fatty acid content in the ssi2 mutants has an impact on SA- and JA-mediated defense signaling. ssi2 mutants resulted in hyper-resistance to green peach aphid and antibiosis activity in petiole exudates.; SSI2; FUNCTIONS IN: acyl-[acyl-carrier-protein] desaturase activity, stearoyl-CoA 9-desaturase activity; INVOLVED IN: in 10 processes; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase-related (InterPro:IPR012348), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078), Fatty acid desaturase, type 2 (InterPro:IPR005067), Stearoyl-ACP desaturase, conserved site (InterPro:IPR005803); BEST Arabidopsis thaliana protein match is: Plant stearoyl-acyl-carrier-protein desaturase family protein (TAIR:AT3G02630.1); Has 946 Blast hits to 938 proteins in 221 species: Archae - 0; Bacteria - 436; Metazoa - 2; Fungi - 0; Plants - 450; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 1060.0) &  (original description: no original description)","protein_coding"
"PSME_00017039-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00017819-RA","No alias","Pseudotsuga menziesii","(at3g03580 : 689.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G18750.1); Has 54534 Blast hits to 14239 proteins in 270 species: Archae - 2; Bacteria - 13; Metazoa - 57; Fungi - 143; Plants - 53473; Viruses - 0; Other Eukaryotes - 846 (source: NCBI BLink). & (q76c99|rf1_orysa : 141.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1378.0) &  (original description: no original description)","protein_coding"
"PSME_00017878-RA","No alias","Pseudotsuga menziesii","(at4g26480 : 355.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT5G56140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 710.0) &  (original description: no original description)","protein_coding"
"PSME_00018097-RA","No alias","Pseudotsuga menziesii","(at4g35450 : 322.0) Involved in targeting of chloroplast outer membrane proteins to the chloroplast. Double mutants of AKR2A and the highly homologous AKR2B have yellow leaves, significantly reduced chloroplast proteins, and no thylakoid membranes.; ankyrin repeat-containing protein 2 (AKR2); CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat-containing 2B (TAIR:AT2G17390.1). & (reliability: 626.0) &  (original description: no original description)","protein_coding"
"PSME_00018215-RA","No alias","Pseudotsuga menziesii","(at2g20890 : 154.0) Chloroplast-localized Thylakoid formation1 gene product involved in vesicle-mediated formation of thylakoid membranes.  Thf1 antisense lines contain abnormal chloroplasts early in leaf development (chloroplasts have loosely stacked thylakoid membranes). Expression was induced in the light and decreased under dark conditions. G-alpha interaction partner that functions downstream of the plasma membraneñdelimited heterotrimeric G-protein (GPA1) in a D-glucose signaling pathway. Localized to both the outer plastid membrane and the stroma. Probably involved in the metabolic pathway that controls the assembly of the PS II complex.; photosystem II reaction center PSB29 protein (PSB29); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 6 processes; LOCATED IN: in 9 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II biogenesis protein Psp29 (InterPro:IPR017499); Has 330 Blast hits to 330 proteins in 95 species: Archae - 0; Bacteria - 141; Metazoa - 1; Fungi - 0; Plants - 61; Viruses - 6; Other Eukaryotes - 121 (source: NCBI BLink). & (q7xab8|thf1_soltu : 149.0) Protein THYLAKOID FORMATION1, chloroplast precursor - Solanum tuberosum (Potato) & (reliability: 308.0) &  (original description: no original description)","protein_coding"
"PSME_00018336-RA","No alias","Pseudotsuga menziesii","(at3g26380 : 511.0) Melibiase family protein; FUNCTIONS IN: alpha-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: N-terminal protein myristoylation, carbohydrate metabolic process, metabolic process, lactose catabolic process; LOCATED IN: cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 27 (InterPro:IPR002241), Aldolase-type TIM barrel (InterPro:IPR013785), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Melibiase family protein (TAIR:AT3G56310.1); Has 1323 Blast hits to 1316 proteins in 313 species: Archae - 2; Bacteria - 513; Metazoa - 306; Fungi - 224; Plants - 205; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (q9fxt4|agal_orysa : 92.0) Alpha-galactosidase precursor (EC 3.2.1.22) (Melibiase) (Alpha-D-galactoside galactohydrolase) - Oryza sativa (Rice) & (reliability: 1022.0) &  (original description: no original description)","protein_coding"
"PSME_00019077-RA","No alias","Pseudotsuga menziesii","(at1g19330 : 212.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G75060.1). & (reliability: 424.0) &  (original description: no original description)","protein_coding"
"PSME_00019330-RA","No alias","Pseudotsuga menziesii","(at4g11220 : 250.0) VIRB2-interacting protein 2 (BTI2); INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: VIRB2-interacting protein 1 (TAIR:AT4G23630.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 486.0) &  (original description: no original description)","protein_coding"
"PSME_00019484-RA","No alias","Pseudotsuga menziesii","(p55876|if5_maize : 447.0) Eukaryotic translation initiation factor 5 (eIF-5) - Zea mays (Maize) & (at1g36730 : 438.0) Translation initiation factor IF2/IF5; FUNCTIONS IN: binding, translation initiation factor activity; INVOLVED IN: translational initiation, regulation of translational initiation; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Translation initiation factor IF2/IF5, N-terminal (InterPro:IPR016189), Translation initiation factor IF2/IF5, zinc-binding (InterPro:IPR016190), eIF4-gamma/eIF5/eIF2-epsilon (InterPro:IPR003307), Translation initiation factor IF2/IF5 (InterPro:IPR002735), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Translation initiation factor IF2/IF5 (TAIR:AT1G77840.1); Has 6371 Blast hits to 4946 proteins in 714 species: Archae - 245; Bacteria - 804; Metazoa - 2020; Fungi - 758; Plants - 416; Viruses - 40; Other Eukaryotes - 2088 (source: NCBI BLink). & (reliability: 876.0) &  (original description: no original description)","protein_coding"
"PSME_00019833-RA","No alias","Pseudotsuga menziesii","(at3g02950 : 256.0) Encodes a component of the putative Arabidopsis THO/TREX complex: THO1 or HPR1 (At5g09860), THO2 (At1g24706), THO3 or TEX1 (At5g56130), THO5 (At5g42920, At1g45233), THO6 (At2g19430), and THO7 (At5g16790, At3g02950). THO/TREX complexes in animals have been implicated in the transport of mRNA precursors.  Mutants of THO3/TEX1, THO1, THO6 accumulate reduced amount of small interfering (si)RNA, suggesting a role of the putative Arabidopsis THO/TREX in siRNA biosynthesis.; THO7; CONTAINS InterPro DOMAIN/s: Tho complex subunit 7 (InterPro:IPR018018), Tho complex subunit 7/Mft1p (InterPro:IPR008501); BEST Arabidopsis thaliana protein match is: Tho complex subunit 7/Mft1p (TAIR:AT5G16790.1); Has 2509 Blast hits to 2230 proteins in 391 species: Archae - 54; Bacteria - 255; Metazoa - 1226; Fungi - 237; Plants - 121; Viruses - 25; Other Eukaryotes - 591 (source: NCBI BLink). & (reliability: 512.0) &  (original description: no original description)","protein_coding"
"PSME_00019922-RA","No alias","Pseudotsuga menziesii","(at2g44680 : 360.0) Encodes casein kinase II beta chain, a CK2 regulatory subunit. Nuclear-localized CKB4 protein exists in vivo as different isoforms, resulting from phosphorylation on serine residues. The phosphorylated isoforms are the preferred substrate for ubiquitination and degradation by the proteasome pathway. Involved in regulation of circadian clock.; casein kinase II  beta subunit 4 (CKB4); CONTAINS InterPro DOMAIN/s: Casein kinase II, regulatory subunit, alpha-helical (InterPro:IPR016149), Casein kinase II, regulatory subunit, beta-sheet (InterPro:IPR016150), Casein kinase II, regulatory subunit (InterPro:IPR000704); BEST Arabidopsis thaliana protein match is: casein kinase II  beta chain 3 (TAIR:AT3G60250.2); Has 1093 Blast hits to 1091 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 429; Fungi - 285; Plants - 156; Viruses - 0; Other Eukaryotes - 223 (source: NCBI BLink). & (reliability: 720.0) &  (original description: no original description)","protein_coding"
"PSME_00019929-RA","No alias","Pseudotsuga menziesii","(at3g46510 : 699.0) Encodes a protein containing a UND, a U-box, and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays.  Can be phosphorylated in vitro by MLPK, ARK1, and ARK2 but not by SD1-29.; plant U-box 13 (PUB13); CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: PLANT U-BOX 12 (TAIR:AT2G28830.1); Has 8308 Blast hits to 5676 proteins in 314 species: Archae - 6; Bacteria - 52; Metazoa - 2498; Fungi - 809; Plants - 4013; Viruses - 3; Other Eukaryotes - 927 (source: NCBI BLink). & (q64ha9|spl11_orysa : 659.0) Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice) & (reliability: 1398.0) &  (original description: no original description)","protein_coding"
"PSME_00019987-RA","No alias","Pseudotsuga menziesii","(at1g75560 : 301.0) zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878), Zinc finger, CCHC retroviral-type (InterPro:IPR013084); BEST Arabidopsis thaliana protein match is: cold shock domain protein 1 (TAIR:AT4G36020.1); Has 19425 Blast hits to 13089 proteins in 377 species: Archae - 0; Bacteria - 14; Metazoa - 2237; Fungi - 1342; Plants - 858; Viruses - 14254; Other Eukaryotes - 720 (source: NCBI BLink). & (reliability: 602.0) &  (original description: no original description)","protein_coding"
"PSME_00020333-RA","No alias","Pseudotsuga menziesii","(at1g06340 : 99.4) Plant Tudor-like protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), Agenet (InterPro:IPR008395); BEST Arabidopsis thaliana protein match is: agenet domain-containing protein (TAIR:AT1G09320.1); Has 263 Blast hits to 216 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 260; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 198.8) &  (original description: no original description)","protein_coding"
"PSME_00020478-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00021183-RA","No alias","Pseudotsuga menziesii","(at4g02750 : 513.0) Tetratricopeptide repeat (TPR)-like superfamily protein; LOCATED IN: mitochondrion; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G09410.1); Has 56089 Blast hits to 14902 proteins in 275 species: Archae - 0; Bacteria - 15; Metazoa - 173; Fungi - 123; Plants - 55165; Viruses - 0; Other Eukaryotes - 613 (source: NCBI BLink). & (q76c99|rf1_orysa : 104.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 926.0) &  (original description: no original description)","protein_coding"
"PSME_00021412-RA","No alias","Pseudotsuga menziesii","(at3g62470 : 474.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G62540.1); Has 39079 Blast hits to 12185 proteins in 290 species: Archae - 4; Bacteria - 32; Metazoa - 449; Fungi - 607; Plants - 36694; Viruses - 0; Other Eukaryotes - 1293 (source: NCBI BLink). & (q76c99|rf1_orysa : 130.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 948.0) &  (original description: no original description)","protein_coding"
"PSME_00021602-RA","No alias","Pseudotsuga menziesii","(p19242|hsp21_pea : 160.0) 17.1 kDa class II heat shock protein - Pisum sativum (Garden pea) & (at5g12020 : 148.0) 17.6 kDa class II heat shock protein (HSP17.6II); CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: heat shock protein 17.6A (TAIR:AT5G12030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 296.0) &  (original description: no original description)","protein_coding"
"PSME_00022375-RA","No alias","Pseudotsuga menziesii","(at1g33970 : 282.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding; INVOLVED IN: response to bacterium; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AIG1 (InterPro:IPR006703); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G09950.1). & (reliability: 564.0) &  (original description: no original description)","protein_coding"
"PSME_00022744-RA","No alias","Pseudotsuga menziesii","(at1g71120 : 185.0) Contains lipase signature motif and GDSL domain.; GDSL-motif lipase/hydrolase 6 (GLIP6); FUNCTIONS IN: lipase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-motif lipase 7 (TAIR:AT5G15720.1); Has 3560 Blast hits to 3519 proteins in 249 species: Archae - 0; Bacteria - 402; Metazoa - 0; Fungi - 22; Plants - 3125; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (q7y1x1|est_hevbr : 117.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 370.0) &  (original description: no original description)","protein_coding"
"PSME_00023020-RA","No alias","Pseudotsuga menziesii","(at1g79220 : 108.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT5G64950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 216.0) &  (original description: no original description)","protein_coding"
"PSME_00023021-RA","No alias","Pseudotsuga menziesii","(at1g79220 : 98.6) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT5G64950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 197.2) &  (original description: no original description)","protein_coding"
"PSME_00023181-RA","No alias","Pseudotsuga menziesii","(at2g30780 : 348.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT2G48000.1); Has 13236 Blast hits to 5853 proteins in 219 species: Archae - 0; Bacteria - 7; Metazoa - 110; Fungi - 117; Plants - 12711; Viruses - 0; Other Eukaryotes - 291 (source: NCBI BLink). & (reliability: 696.0) &  (original description: no original description)","protein_coding"
"PSME_00023562-RA","No alias","Pseudotsuga menziesii","(at4g30820 : 135.0) cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cdk-activating kinase assembly factor (MAT1) (InterPro:IPR004575), Cdk-activating kinase assembly factor, MAT1 (InterPro:IPR015877); Has 365 Blast hits to 365 proteins in 175 species: Archae - 0; Bacteria - 0; Metazoa - 129; Fungi - 145; Plants - 58; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). & (reliability: 270.0) &  (original description: no original description)","protein_coding"
"PSME_00023563-RA","No alias","Pseudotsuga menziesii","(at5g11730 : 448.0) Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G25970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 896.0) &  (original description: no original description)","protein_coding"
"PSME_00023622-RA","No alias","Pseudotsuga menziesii","(at1g70060 : 281.0) Encodes a homolog of the transcriptional repressor SIN3 (AT1G24190).; SIN3-like 4 (SNL4); INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase interacting (InterPro:IPR013194), Paired amphipathic helix (InterPro:IPR003822); BEST Arabidopsis thaliana protein match is: SIN3-like 3 (TAIR:AT1G24190.2); Has 2571 Blast hits to 1108 proteins in 232 species: Archae - 4; Bacteria - 56; Metazoa - 1028; Fungi - 808; Plants - 415; Viruses - 14; Other Eukaryotes - 246 (source: NCBI BLink). & (reliability: 546.0) &  (original description: no original description)","protein_coding"
"PSME_00023864-RA","No alias","Pseudotsuga menziesii","(at5g35520 : 125.0) encodes a homologue of the yeast (S. pombe) Mis12 (minichromosome instability) protein. MIS12 co-localizes with 180 bp repeats of centromeric DNA throughout the cell cycle with a similar pattern to AtCENH3/HTR12. Neither of these two proteins completely cover the 180 bp regions based on FISH analysis.; MINICHROMOSOME INSTABILITY 12 (MIS12)-LIKE (MIS12); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: mitosis, cell cycle; LOCATED IN: chromosome, centromeric region, nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Centromere protein Mis12 (InterPro:IPR008685); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 250.0) &  (original description: no original description)","protein_coding"
"PSME_00024426-RA","No alias","Pseudotsuga menziesii","(at1g22510 : 144.0) RING/U-box protein with domain of unknown function (DUF 1232); FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1232 (InterPro:IPR010652); BEST Arabidopsis thaliana protein match is: RING/U-box protein with domain of unknown function (DUF 1232) (TAIR:AT1G72175.1). & (reliability: 288.0) &  (original description: no original description)","protein_coding"
"PSME_00024642-RA","No alias","Pseudotsuga menziesii","(at5g18610 : 583.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G13160.1). & (q8lkz1|nork_pea : 242.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 1166.0) &  (original description: no original description)","protein_coding"
"PSME_00024744-RA","No alias","Pseudotsuga menziesii","(at1g05120 : 101.0) Helicase protein with RING/U-box domain; FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G02670.1); Has 29218 Blast hits to 14448 proteins in 1607 species: Archae - 124; Bacteria - 8622; Metazoa - 6656; Fungi - 6694; Plants - 2674; Viruses - 189; Other Eukaryotes - 4259 (source: NCBI BLink). & (reliability: 202.0) &  (original description: no original description)","protein_coding"
"PSME_00025265-RA","No alias","Pseudotsuga menziesii","(at4g35450 : 343.0) Involved in targeting of chloroplast outer membrane proteins to the chloroplast. Double mutants of AKR2A and the highly homologous AKR2B have yellow leaves, significantly reduced chloroplast proteins, and no thylakoid membranes.; ankyrin repeat-containing protein 2 (AKR2); CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat-containing 2B (TAIR:AT2G17390.1). & (reliability: 682.0) &  (original description: no original description)","protein_coding"
"PSME_00025641-RA","No alias","Pseudotsuga menziesii","(at4g29160 : 252.0) SNF7.1; CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT2G19830.1); Has 1847 Blast hits to 1847 proteins in 245 species: Archae - 2; Bacteria - 29; Metazoa - 703; Fungi - 444; Plants - 428; Viruses - 0; Other Eukaryotes - 241 (source: NCBI BLink). & (reliability: 504.0) &  (original description: no original description)","protein_coding"
"PSME_00025756-RA","No alias","Pseudotsuga menziesii","(at1g28140 : 194.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2301, transmembrane (InterPro:IPR019275); Has 140 Blast hits to 140 proteins in 72 species: Archae - 0; Bacteria - 86; Metazoa - 10; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 388.0) &  (original description: no original description)","protein_coding"
"PSME_00026560-RA","No alias","Pseudotsuga menziesii","(at5g23850 : 461.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipopolysaccharide-modifying protein (InterPro:IPR006598), Protein of unknown function DUF821, CAP10-like (InterPro:IPR008539); BEST Arabidopsis thaliana protein match is: Arabidopsis thaliana protein of unknown function (DUF821) (TAIR:AT3G48980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 922.0) &  (original description: no original description)","protein_coding"
"PSME_00026856-RA","No alias","Pseudotsuga menziesii","(at5g42150 : 221.0) Glutathione S-transferase family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutaredoxin active site (InterPro:IPR011767), Thioredoxin-like fold (InterPro:IPR012336); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 442.0) &  (original description: no original description)","protein_coding"
"PSME_00026886-RA","No alias","Pseudotsuga menziesii","(at5g47400 : 367.0) unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 734.0) &  (original description: no original description)","protein_coding"
"PSME_00026987-RA","No alias","Pseudotsuga menziesii","(at1g01060 : 116.0) LHY encodes a myb-related putative transcription factor involved in circadian rhythm along with another myb transcription factor CCA1; LATE ELONGATED HYPOCOTYL (LHY); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 11 processes; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: circadian clock associated 1 (TAIR:AT2G46830.1). & (reliability: 214.0) &  (original description: no original description)","protein_coding"
"PSME_00027052-RA","No alias","Pseudotsuga menziesii","(at2g25110 : 306.0) Encodes an endoplasmic reticulum protein SDF2 (stromal-derived factor-2).  Forms a complex SDF2-ERdj3B-BiP that is required for the proper accumulation of the surface-exposed leucine-rich repeat receptor kinases EFR.  EFR is involved in PAMP (pathogen associated molecular patterns) triggered immunity.; stromal cell-derived factor 2-like protein precursor (SDF2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response to bacterium, defense response to fungus, PAMP-induced immunity; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: MIR (InterPro:IPR003608), MIR motif (InterPro:IPR016093); Has 1035 Blast hits to 992 proteins in 196 species: Archae - 0; Bacteria - 0; Metazoa - 386; Fungi - 512; Plants - 64; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (reliability: 612.0) &  (original description: no original description)","protein_coding"
"PSME_00027119-RA","No alias","Pseudotsuga menziesii","(at5g05930 : 141.0) guanylyl cyclase 1 (GC1); CONTAINS InterPro DOMAIN/s: Guanylyl cyclase (InterPro:IPR018616); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 282.0) &  (original description: no original description)","protein_coding"
"PSME_00027172-RA","No alias","Pseudotsuga menziesii","(at5g42820 : 293.0) U2 auxiliary factor small subunit. The atU2AF35b protein and its homolog, atU2AF35a, contain most of the conserved domains of hsU2AF35, including the psiRRM, one RS domain, two zinc fingers, and the two regions for interacting with U2AF large subunit. Both proteins lack the stretch of glycines present in human U2AF35. The sequences are overall 83% identical, and each Arabidopsis homolog shows approximately 70% similarity to hsU2AF35.    U2AF(35) homologs were also identified from maize, rice and other plants with large-scale EST projects. Both genes are expressed in all major tissues, with atU2AF(35)a expressed at a higher level than atU2AF(35)b in most tissues. The expression patterns were different in roots: atU2AF(35)b expressed strongly in whole young roots and root tips and atU2AF(35)a limited to root vascular regions.; U2AF35B; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; INVOLVED IN: photoperiodism, flowering; LOCATED IN: nucleus; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), U2 auxiliary factor small subunit (InterPro:IPR009145); BEST Arabidopsis thaliana protein match is: U2 snRNP auxiliary factor small subunit, putative (TAIR:AT1G27650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 586.0) &  (original description: no original description)","protein_coding"
"PSME_00027493-RA","No alias","Pseudotsuga menziesii","(at5g19140 : 293.0) AILP1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus, response to aluminum ion; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Aluminium induced protein with YGL and LRDR motifs (TAIR:AT5G43830.1); Has 840 Blast hits to 840 proteins in 265 species: Archae - 8; Bacteria - 375; Metazoa - 14; Fungi - 0; Plants - 326; Viruses - 3; Other Eukaryotes - 114 (source: NCBI BLink). & (p24805|tsjt1_tobac : 116.0) Stem-specific protein TSJT1 - Nicotiana tabacum (Common tobacco) & (reliability: 586.0) &  (original description: no original description)","protein_coding"
"PSME_00027664-RA","No alias","Pseudotsuga menziesii","(q07204|f16p1_brana : 551.0) Fructose-1,6-bisphosphatase, chloroplast precursor (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase) (FBPase) - Brassica napus (Rape) & (at3g54050 : 550.0) Encodes HCEF1 (High Cyclic Electron Flow 1).  Mutant phenotype: constitutively elevated electron flow (CEFI).; high cyclic electron flow 1 (HCEF1); FUNCTIONS IN: fructose 1,6-bisphosphate 1-phosphatase activity, phosphoric ester hydrolase activity; INVOLVED IN: response to cold, photosynthetic electron transport in photosystem I, fructose metabolic process; LOCATED IN: stromule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fructose-1,6-bisphosphatase, active site (InterPro:IPR020548), Fructose-1,6-bisphosphatase (InterPro:IPR000146); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT1G43670.1). & (reliability: 1100.0) &  (original description: no original description)","protein_coding"
"PSME_00027729-RA","No alias","Pseudotsuga menziesii","(at1g22540 : 500.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G72140.1); Has 7676 Blast hits to 7510 proteins in 1439 species: Archae - 0; Bacteria - 3907; Metazoa - 586; Fungi - 484; Plants - 2183; Viruses - 0; Other Eukaryotes - 516 (source: NCBI BLink). & (reliability: 1000.0) &  (original description: no original description)","protein_coding"
"PSME_00028508-RA","No alias","Pseudotsuga menziesii","(at3g58970 : 248.0) Transmembrane magnesium transporter. One of nine family members.; magnesium transporter 6 (MGT6); FUNCTIONS IN: magnesium ion transmembrane transporter activity, metal ion transmembrane transporter activity; INVOLVED IN: transmembrane transport, metal ion transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mg2+ transporter protein, CorA-like (InterPro:IPR002523); BEST Arabidopsis thaliana protein match is: magnesium transport 5 (TAIR:AT4G28580.1); Has 803 Blast hits to 784 proteins in 174 species: Archae - 2; Bacteria - 26; Metazoa - 66; Fungi - 194; Plants - 407; Viruses - 2; Other Eukaryotes - 106 (source: NCBI BLink). & (reliability: 496.0) &  (original description: no original description)","protein_coding"
"PSME_00028641-RA","No alias","Pseudotsuga menziesii","(at1g12790 : 188.0) CONTAINS InterPro DOMAIN/s: RuvA domain 2-like (InterPro:IPR010994); Has 29 Blast hits to 29 proteins in 9 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 376.0) &  (original description: no original description)","protein_coding"
"PSME_00028884-RA","No alias","Pseudotsuga menziesii","(at2g32120 : 655.0) heat-shock protein 70T-2 (HSP70T-2); FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, response to high light intensity, response to hydrogen peroxide, response to heat; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 70 (TAIR:AT3G12580.1); Has 23745 Blast hits to 23668 proteins in 4473 species: Archae - 147; Bacteria - 10488; Metazoa - 3198; Fungi - 1451; Plants - 1078; Viruses - 114; Other Eukaryotes - 7269 (source: NCBI BLink). & (p09189|hsp7c_pethy : 265.0) Heat shock cognate 70 kDa protein - Petunia hybrida (Petunia) & (reliability: 1310.0) &  (original description: no original description)","protein_coding"
"PSME_00029071-RA","No alias","Pseudotsuga menziesii","(at2g05160 : 348.0) CCCH-type zinc fingerfamily protein with RNA-binding domain; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein (TAIR:AT3G52980.1); Has 286 Blast hits to 218 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 277; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 696.0) &  (original description: no original description)","protein_coding"
"PSME_00029682-RA","No alias","Pseudotsuga menziesii","(q9xer8|rab7_goshi : 302.0) Ras-related protein Rab7 - Gossypium hirsutum (Upland cotton) & (at3g16100 : 293.0) RAB GTPase homolog G3C (RABG3c); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog G3D (TAIR:AT1G52280.1); Has 25544 Blast hits to 25522 proteins in 774 species: Archae - 27; Bacteria - 219; Metazoa - 13379; Fungi - 3488; Plants - 2822; Viruses - 20; Other Eukaryotes - 5589 (source: NCBI BLink). & (reliability: 586.0) &  (original description: no original description)","protein_coding"
"PSME_00030126-RA","No alias","Pseudotsuga menziesii","(at3g03270 : 169.0) Adenine nucleotide alpha hydrolases-like superfamily protein; INVOLVED IN: response to stress; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G53990.1); Has 4449 Blast hits to 4366 proteins in 896 species: Archae - 444; Bacteria - 2981; Metazoa - 119; Fungi - 123; Plants - 700; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink). & (reliability: 338.0) &  (original description: no original description)","protein_coding"
"PSME_00030790-RA","No alias","Pseudotsuga menziesii","(at2g25280 : 335.0) CONTAINS InterPro DOMAIN/s: UPF0103/Mediator of ErbB2-driven cell motility (Memo), related (InterPro:IPR002737); Has 1074 Blast hits to 1072 proteins in 474 species: Archae - 213; Bacteria - 366; Metazoa - 159; Fungi - 135; Plants - 54; Viruses - 0; Other Eukaryotes - 147 (source: NCBI BLink). & (reliability: 670.0) &  (original description: no original description)","protein_coding"
"PSME_00030901-RA","No alias","Pseudotsuga menziesii","(at1g14560 : 364.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding, transporter activity; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: endomembrane system, mitochondrial inner membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Graves disease carrier protein (InterPro:IPR002167); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT4G26180.1); Has 25798 Blast hits to 13799 proteins in 460 species: Archae - 0; Bacteria - 2; Metazoa - 10868; Fungi - 7493; Plants - 4688; Viruses - 0; Other Eukaryotes - 2747 (source: NCBI BLink). & (p29518|bt1_maize : 116.0) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (reliability: 728.0) &  (original description: no original description)","protein_coding"
"PSME_00031013-RA","No alias","Pseudotsuga menziesii","(at5g10620 : 185.0) methyltransferases; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: rRNA processing; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: SPOUT methyltransferase, predicted (InterPro:IPR003742); BEST Arabidopsis thaliana protein match is: methyltransferases (TAIR:AT5G10605.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 370.0) &  (original description: no original description)","protein_coding"
"PSME_00031568-RA","No alias","Pseudotsuga menziesii","(at4g21580 : 259.0) oxidoreductase, zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity, zinc ion binding; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Quinone oxidoreductase putative, PIG3 (InterPro:IPR014189), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding alcohol dehydrogenase family protein (TAIR:AT5G61510.1); Has 44345 Blast hits to 44175 proteins in 2827 species: Archae - 637; Bacteria - 28883; Metazoa - 1910; Fungi - 3863; Plants - 1554; Viruses - 0; Other Eukaryotes - 7498 (source: NCBI BLink). & (reliability: 518.0) &  (original description: no original description)","protein_coding"
"PSME_00031712-RA","No alias","Pseudotsuga menziesii","(at3g07940 : 129.0) Calcium-dependent ARF-type GTPase activating protein family; FUNCTIONS IN: ARF GTPase activator activity, zinc ion binding; INVOLVED IN: regulation of ARF GTPase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164), C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent ARF-type GTPase activating protein family (TAIR:AT4G21160.4); Has 9376 Blast hits to 8361 proteins in 305 species: Archae - 0; Bacteria - 0; Metazoa - 5295; Fungi - 1386; Plants - 1701; Viruses - 0; Other Eukaryotes - 994 (source: NCBI BLink). & (reliability: 258.0) &  (original description: no original description)","protein_coding"
"PSME_00032224-RA","No alias","Pseudotsuga menziesii","(at1g76690 : 334.0) Encodes one of the closely related 12-oxophytodienoic acid reductases. This enzyme is not expected to participate in jasmonic acid biosynthesis because during in vitro assays, it shows very little activity with the naturally occurring OPDA isomer. Shows activity towards 2,4,6-trinitrotoluene.  Expressed predominately in root. Predicted to be a cytosolic protein.; 12-oxophytodienoate reductase 2 (OPR2); CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), NADH:flavin oxidoreductase/NADH oxidase, N-terminal (InterPro:IPR001155); BEST Arabidopsis thaliana protein match is: 12-oxophytodienoate reductase 1 (TAIR:AT1G76680.1); Has 13197 Blast hits to 13176 proteins in 2056 species: Archae - 127; Bacteria - 9811; Metazoa - 29; Fungi - 865; Plants - 452; Viruses - 0; Other Eukaryotes - 1913 (source: NCBI BLink). & (reliability: 668.0) &  (original description: no original description)","protein_coding"
"PSME_00033328-RA","No alias","Pseudotsuga menziesii","(at1g03350 : 238.0) BSD domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: BSD (InterPro:IPR005607); BEST Arabidopsis thaliana protein match is: BSD domain-containing protein (TAIR:AT4G13110.1); Has 10642 Blast hits to 5945 proteins in 665 species: Archae - 52; Bacteria - 3714; Metazoa - 2927; Fungi - 1314; Plants - 393; Viruses - 71; Other Eukaryotes - 2171 (source: NCBI BLink). & (reliability: 476.0) &  (original description: no original description)","protein_coding"
"PSME_00033713-RA","No alias","Pseudotsuga menziesii",""(at1g55670 : 177.0) Encodes subunit G of photosystem I, an 11-kDa membrane protein that plays an  important role in electron transport between plastocyanin and PSI and is involved in  the stability of the PSI complex. PSI-G subunit is bound to  PSI-B and is in contact with Lhca1. The protein inserts into thylakoids by  a direct or ""spontaneous"" pathway that does not involve the activities of  any known chloroplast protein-targeting machinery. PSI-G appears to be directly or indirectly involved in the interaction between Photosystem I and plastocyanin.; photosystem I subunit G (PSAG); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthetic NADP+ reduction, photosystem I stabilization, protein stabilization, photosynthetic electron transport in photosystem I, photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre, PsaG, plant (InterPro:IPR017494), Photosystem I PsaG/PsaK protein (InterPro:IPR000549), Photosystem I reaction centre, PsaG/PsaK, plant (InterPro:IPR016370); Has 117 Blast hits to 117 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 117; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (p12357|psag_spiol : 172.0) Photosystem I reaction center subunit V, chloroplast precursor (PSI-G) (Photosystem I 9 kDa protein) - Spinacia oleracea (Spinach) & (reliability: 354.0) &  (original description: no original description)"","protein_coding"
"PSME_00034312-RA","No alias","Pseudotsuga menziesii","(at5g06480 : 147.0) Immunoglobulin E-set superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin E-set (InterPro:IPR014756), MD-2-related lipid-recognition (InterPro:IPR003172); BEST Arabidopsis thaliana protein match is: MD-2-related lipid recognition domain-containing protein / ML domain-containing protein (TAIR:AT3G11780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 294.0) &  (original description: no original description)","protein_coding"
"PSME_00034627-RA","No alias","Pseudotsuga menziesii","(at4g10440 : 266.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G33170.1); Has 1162 Blast hits to 1152 proteins in 127 species: Archae - 5; Bacteria - 186; Metazoa - 0; Fungi - 2; Plants - 957; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 532.0) &  (original description: no original description)","protein_coding"
"PSME_00034676-RA","No alias","Pseudotsuga menziesii","(q40220|rac2_lotja : 318.0) Rac-like GTP-binding protein RAC2 - Lotus japonicus & (at3g51300 : 317.0) Encodes a pollen-specific Rop GTPase, member of the Rho family of small GTP binding proteins that interacts with RIC3 and RIC4 to control tip growth in pollen tubes. These three proteins promote the proper targeting of exocytic vesicles in the pollen tube tip. ROP1 activity is regulated by the REN1 GTPase activator protein.; RHO-related protein from plants 1 (ROP1); CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Ras (InterPro:IPR013753), Small GTPase, Rho type (InterPro:IPR003578); BEST Arabidopsis thaliana protein match is: Arabidopsis RAC-like 1 (TAIR:AT2G17800.2); Has 24331 Blast hits to 24300 proteins in 680 species: Archae - 9; Bacteria - 65; Metazoa - 12719; Fungi - 3503; Plants - 2700; Viruses - 20; Other Eukaryotes - 5315 (source: NCBI BLink). & (reliability: 634.0) &  (original description: no original description)","protein_coding"
"PSME_00034692-RA","No alias","Pseudotsuga menziesii","(at2g42520 : 731.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT3G58510.3); Has 140248 Blast hits to 67514 proteins in 3679 species: Archae - 1004; Bacteria - 58923; Metazoa - 37605; Fungi - 9665; Plants - 13202; Viruses - 1099; Other Eukaryotes - 18750 (source: NCBI BLink). & (p46942|db10_nicsy : 321.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1462.0) &  (original description: no original description)","protein_coding"
"PSME_00034714-RA","No alias","Pseudotsuga menziesii","(p41380|if4a3_nicpl : 604.0) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at3g19760 : 578.0) Encodes an RNA helicase that may be a component of the Exon Junction Complex. Subcellular localization is modulated by stress. Under normal conditions it is localized to the nuceloplasm but under hyopoxic conditions it localizes to the nucleolus and splicing speckles.; eukaryotic initiation factor 4A-III (EIF4A-III); FUNCTIONS IN: protein binding, ATP-dependent helicase activity; INVOLVED IN: mRNA processing, response to hypoxia; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G51380.1); Has 50040 Blast hits to 49280 proteins in 3163 species: Archae - 836; Bacteria - 27183; Metazoa - 6400; Fungi - 4843; Plants - 2693; Viruses - 42; Other Eukaryotes - 8043 (source: NCBI BLink). & (reliability: 1156.0) &  (original description: no original description)","protein_coding"
"PSME_00034925-RA","No alias","Pseudotsuga menziesii","(at3g57430 : 519.0) Encodes a chloroplast RNA editing factor.; ORGANELLE TRANSCRIPT PROCESSING 84 (OTP84); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G11290.1); Has 46517 Blast hits to 13331 proteins in 240 species: Archae - 0; Bacteria - 7; Metazoa - 55; Fungi - 91; Plants - 45789; Viruses - 0; Other Eukaryotes - 575 (source: NCBI BLink). & (reliability: 942.0) &  (original description: no original description)","protein_coding"
"PSME_00034947-RA","No alias","Pseudotsuga menziesii","(at1g72416 : 108.0) Chaperone DnaJ-domain superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT3G14200.1). & (reliability: 216.0) &  (original description: no original description)","protein_coding"
"PSME_00035297-RA","No alias","Pseudotsuga menziesii","(at2g33550 : 92.8) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT4G31270.1); Has 743 Blast hits to 735 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 25; Fungi - 8; Plants - 568; Viruses - 0; Other Eukaryotes - 142 (source: NCBI BLink). & (reliability: 185.6) &  (original description: no original description)","protein_coding"
"PSME_00035976-RA","No alias","Pseudotsuga menziesii","(at1g70530 : 338.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 3 (CRK3); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (TAIR:AT5G40380.1); Has 119727 Blast hits to 118238 proteins in 4920 species: Archae - 112; Bacteria - 13995; Metazoa - 44248; Fungi - 9864; Plants - 33587; Viruses - 452; Other Eukaryotes - 17469 (source: NCBI BLink). & (q8l4h4|nork_medtr : 203.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 610.0) &  (original description: no original description)","protein_coding"
"PSME_00036347-RA","No alias","Pseudotsuga menziesii","(at2g20560 : 396.0) DNAJ heat shock family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT4G28480.1); Has 27936 Blast hits to 27733 proteins in 3449 species: Archae - 187; Bacteria - 10270; Metazoa - 4781; Fungi - 2609; Plants - 2869; Viruses - 17; Other Eukaryotes - 7203 (source: NCBI BLink). & (q04960|dnjh_cucsa : 107.0) DnaJ protein homolog (DNAJ-1) - Cucumis sativus (Cucumber) & (reliability: 792.0) &  (original description: no original description)","protein_coding"
"PSME_00037034-RA","No alias","Pseudotsuga menziesii","(at1g43850 : 471.0) Encodes a transcriptional co-regulator of AGAMOUS, that functions with LEUNIG to repress AG in the outer floral whorls.; seuss (SEU); FUNCTIONS IN: protein binding, transcription cofactor activity, DNA binding, protein heterodimerization activity; INVOLVED IN: multicellular organismal development, gynoecium development, embryo development, ovule development, regulation of flower development; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: SEUSS-like 3 (TAIR:AT4G25515.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 942.0) &  (original description: no original description)","protein_coding"
"PSME_00038452-RA","No alias","Pseudotsuga menziesii","(p10053|rbs_pinth : 142.0) Ribulose bisphosphate carboxylase small chain, chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit) - Pinus thunbergii (Green pine) (Japanese black pine) & (at1g67090 : 108.0) ribulose bisphosphate carboxylase small chain 1A (RBCS1A); FUNCTIONS IN: ribulose-bisphosphate carboxylase activity, copper ion binding; INVOLVED IN: carbon fixation, response to cold, response to blue light, response to red light, response to far red light; LOCATED IN: in 7 components; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase, small chain (InterPro:IPR000894); BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase (small chain) family protein (TAIR:AT5G38430.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 216.0) &  (original description: no original description)","protein_coding"
"PSME_00038937-RA","No alias","Pseudotsuga menziesii","(at3g13770 : 505.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 37890 Blast hits to 13461 proteins in 236 species: Archae - 0; Bacteria - 8; Metazoa - 36; Fungi - 51; Plants - 37361; Viruses - 0; Other Eukaryotes - 434 (source: NCBI BLink). & (q76c99|rf1_orysa : 131.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 940.0) &  (original description: no original description)","protein_coding"
"PSME_00039275-RA","No alias","Pseudotsuga menziesii","(at3g28345 : 1459.0) ABC transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: shoot apex, inflorescence meristem, cotyledon, hypocotyl, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 17 (TAIR:AT3G28380.1); Has 822177 Blast hits to 385706 proteins in 4160 species: Archae - 14477; Bacteria - 641696; Metazoa - 17642; Fungi - 12086; Plants - 9535; Viruses - 48; Other Eukaryotes - 126693 (source: NCBI BLink). & (q6yuu5|mdr_orysa : 1443.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 2918.0) &  (original description: no original description)","protein_coding"
"PSME_00039446-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00039505-RA","No alias","Pseudotsuga menziesii","(at5g49650 : 670.0) Encodes a cytosolic protein capable of phosphorylating xylulose and deoxy-xylulose. It most likely plays a role in producing precursors for isoprenoid biosynthesis.; xylulose kinase-2 (XK-2); FUNCTIONS IN: xylulokinase activity; INVOLVED IN: xylulose metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate kinase, FGGY (InterPro:IPR000577), Carbohydrate kinase, FGGY, N-terminal (InterPro:IPR018484), Carbohydrate kinase, FGGY, C-terminal (InterPro:IPR018485); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1340.0) &  (original description: no original description)","protein_coding"
"PSME_00039551-RA","No alias","Pseudotsuga menziesii","(at2g25430 : 476.0) epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related; FUNCTIONS IN: phospholipid binding, clathrin binding, binding, phosphatidylinositol binding; INVOLVED IN: clathrin coat assembly; LOCATED IN: nucleus, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epsin-like, N-terminal (InterPro:IPR013809), Clathrin adaptor, phosphoinositide-binding, GAT-like (InterPro:IPR014712), ANTH (InterPro:IPR011417), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/ANTH/VHS superfamily protein (TAIR:AT4G32285.2); Has 1786 Blast hits to 1328 proteins in 221 species: Archae - 4; Bacteria - 135; Metazoa - 673; Fungi - 126; Plants - 678; Viruses - 2; Other Eukaryotes - 168 (source: NCBI BLink). & (reliability: 952.0) &  (original description: no original description)","protein_coding"
"PSME_00039910-RA","No alias","Pseudotsuga menziesii","(at1g15410 : 249.0) aspartate-glutamate racemase family; FUNCTIONS IN: racemase and epimerase activity, acting on amino acids and derivatives; INVOLVED IN: metabolic process, cellular amino acid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Asp/Glu/hydantoin racemase (InterPro:IPR015942), Aspartate racemase (InterPro:IPR004380), Asp/Glu racemase (InterPro:IPR001920); Has 2436 Blast hits to 2424 proteins in 674 species: Archae - 57; Bacteria - 1708; Metazoa - 0; Fungi - 2; Plants - 35; Viruses - 0; Other Eukaryotes - 634 (source: NCBI BLink). & (reliability: 498.0) &  (original description: no original description)","protein_coding"
"PSME_00040108-RA","No alias","Pseudotsuga menziesii","(at1g02680 : 157.0) TBP-associated factor 13 (TAF13); FUNCTIONS IN: RNA polymerase II transcription factor activity, DNA binding; INVOLVED IN: transcription initiation, transcription from RNA polymerase II promoter; LOCATED IN: transcription factor complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription initiation factor IID, 18kDa subunit (InterPro:IPR003195), Histone-fold (InterPro:IPR009072); Has 554 Blast hits to 554 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 207; Fungi - 284; Plants - 44; Viruses - 2; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 314.0) &  (original description: no original description)","protein_coding"
"PSME_00040213-RA","No alias","Pseudotsuga menziesii","(at1g01820 : 345.0) member of the peroxin11 (PEX11) gene family, integral to peroxisome membrane, controls peroxisome proliferation.; peroxin 11c (PEX11C); CONTAINS InterPro DOMAIN/s: Peroxisomal biogenesis factor 11 (InterPro:IPR008733); BEST Arabidopsis thaliana protein match is: peroxin 11D (TAIR:AT2G45740.3); Has 289 Blast hits to 289 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 46; Fungi - 41; Plants - 179; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). & (reliability: 684.0) &  (original description: no original description)","protein_coding"
"PSME_00040804-RA","No alias","Pseudotsuga menziesii","(at5g19160 : 478.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 11 (TBL11); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) (TAIR:AT3G06080.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 956.0) &  (original description: no original description)","protein_coding"
"PSME_00041019-RA","No alias","Pseudotsuga menziesii","(at4g32440 : 104.0) Plant Tudor-like RNA-binding protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), Agenet (InterPro:IPR008395); BEST Arabidopsis thaliana protein match is: Plant Tudor-like protein (TAIR:AT2G25590.1). & (reliability: 208.0) &  (original description: no original description)","protein_coding"
"PSME_00041288-RA","No alias","Pseudotsuga menziesii","(at1g14360 : 481.0) UDP-galactose transporter 3 (UTR3); FUNCTIONS IN: pyrimidine nucleotide sugar transmembrane transporter activity; INVOLVED IN: transmembrane transport; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: UAA transporter (InterPro:IPR013657); BEST Arabidopsis thaliana protein match is: UDP-galactose transporter 1 (TAIR:AT2G02810.1); Has 1048 Blast hits to 1040 proteins in 233 species: Archae - 0; Bacteria - 0; Metazoa - 487; Fungi - 154; Plants - 232; Viruses - 0; Other Eukaryotes - 175 (source: NCBI BLink). & (reliability: 962.0) &  (original description: no original description)","protein_coding"
"PSME_00042465-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00042813-RA","No alias","Pseudotsuga menziesii","(q689g9|prr1_orysa : 289.0) Two-component response regulator-like PRR1 (Pseudo-response regulator 1) (OsPRR1) - Oryza sativa (Rice) & (at5g61380 : 278.0) Pseudo response regulator involved in the generation of circadian rhythms. TOC1 appears to shorten the period of circumnutation speed.  TOC1 contributes to the plant fitness (carbon fixation, biomass) by influencing the circadian clock period. PRR3 may increase the stability of TOC1 by preventing interactions between TOC1 and the F-box protein ZTL. Expression of TOC1 is correlated with rhythmic changes in chromatin organization.; TIMING OF CAB EXPRESSION 1 (TOC1); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: pseudo-response regulator 3 (TAIR:AT5G60100.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 556.0) &  (original description: no original description)","protein_coding"
"PSME_00043091-RA","No alias","Pseudotsuga menziesii","(at1g07350 : 204.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: RNA splicing; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G35785.3); Has 999351 Blast hits to 998918 proteins in 36088 species: Archae - 21775; Bacteria - 603314; Metazoa - 202027; Fungi - 24253; Plants - 55487; Viruses - 69473; Other Eukaryotes - 23022 (source: NCBI BLink). & (reliability: 408.0) &  (original description: no original description)","protein_coding"
"PSME_00043525-RA","No alias","Pseudotsuga menziesii","(at2g39450 : 288.0) Encodes a Golgi-localized manganese transporter that is involved in Mn tolerance. When expressed into yeast cells, this gene confer Mn<sup>2+</sup> and Cu<sup>2+</sup> tolerance.; MTP11; CONTAINS InterPro DOMAIN/s: Cation efflux protein (InterPro:IPR002524); BEST Arabidopsis thaliana protein match is: Cation efflux family protein (TAIR:AT1G79520.1); Has 5154 Blast hits to 5150 proteins in 1777 species: Archae - 162; Bacteria - 4222; Metazoa - 44; Fungi - 292; Plants - 207; Viruses - 0; Other Eukaryotes - 227 (source: NCBI BLink). & (reliability: 576.0) &  (original description: no original description)","protein_coding"
"PSME_00043546-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00044235-RA","No alias","Pseudotsuga menziesii","(at1g70210 : 199.0) Encodes a D-type cyclin that physically interacts with CDC2A.  Its expression is upregulated early during germination.; CYCLIN D1;1 (CYCD1;1); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: G1 phase of mitotic cell cycle, regulation of cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin D2;1 (TAIR:AT2G22490.1); Has 3455 Blast hits to 3453 proteins in 343 species: Archae - 0; Bacteria - 0; Metazoa - 1586; Fungi - 382; Plants - 1073; Viruses - 13; Other Eukaryotes - 401 (source: NCBI BLink). & (reliability: 398.0) &  (original description: no original description)","protein_coding"
"PSME_00044359-RA","No alias","Pseudotsuga menziesii","(at1g08260 : 150.0) Similar to POL2A, DNA polymerase epsilon catalytic subunit. Essential for Arabidopsis growth. Null homozygotes are embryo lethal, partial loss of function alleles show embryo patterning defects such as root pole displacement. Delayed progression through cell cycle results in embryos with smaller numbers of larger cells.; TILTED 1 (TIL1); FUNCTIONS IN: DNA-directed DNA polymerase activity, DNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: positive regulation of S phase of mitotic cell cycle, negative regulation of long-day photoperiodism, flowering, embryo development ending in seed dormancy; LOCATED IN: apoplast, epsilon DNA polymerase complex; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase, family B (InterPro:IPR022762), DNA-directed DNA polymerase, family B, exonuclease domain (InterPro:IPR006133), Domain of unknown function DUF1744 (InterPro:IPR013697), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), DNA-directed DNA polymerase, family B, conserved region (InterPro:IPR006134); BEST Arabidopsis thaliana protein match is: DNA polymerase epsilon catalytic subunit (TAIR:AT2G27120.1); Has 2011 Blast hits to 1700 proteins in 652 species: Archae - 331; Bacteria - 603; Metazoa - 305; Fungi - 291; Plants - 83; Viruses - 58; Other Eukaryotes - 340 (source: NCBI BLink). & (reliability: 300.0) &  (original description: no original description)","protein_coding"
"PSME_00044616-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00044646-RA","No alias","Pseudotsuga menziesii","(at3g61260 : 92.0) Remorin family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Remorin, C-terminal (InterPro:IPR005516), Remorin, N-terminal (InterPro:IPR005518); BEST Arabidopsis thaliana protein match is: Remorin family protein (TAIR:AT2G45820.1); Has 8155 Blast hits to 5353 proteins in 884 species: Archae - 12; Bacteria - 2269; Metazoa - 1454; Fungi - 651; Plants - 718; Viruses - 174; Other Eukaryotes - 2877 (source: NCBI BLink). & (p93788|remo_soltu : 92.0) Remorin (pp34) - Solanum tuberosum (Potato) & (reliability: 184.0) &  (original description: no original description)","protein_coding"
"PSME_00045428-RA","No alias","Pseudotsuga menziesii","(at1g62200 : 207.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: peptide transporter 2 (TAIR:AT2G02040.1); Has 8090 Blast hits to 7669 proteins in 1476 species: Archae - 0; Bacteria - 3978; Metazoa - 789; Fungi - 491; Plants - 2227; Viruses - 0; Other Eukaryotes - 605 (source: NCBI BLink). & (reliability: 408.0) &  (original description: no original description)","protein_coding"
"PSME_00045974-RA","No alias","Pseudotsuga menziesii","(p35684|rl3_orysj : 681.0) 60S ribosomal protein L3 OS=Oryza sativa subsp. japonica GN=RPL3 PE=2 SV=2 & (at1g43170 : 669.0) Encodes a cytoplasmic ribosomal protein.; ribosomal protein 1 (RP1); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, embryo development ending in seed dormancy; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L3 (InterPro:IPR000597), Ribosomal protein L3, conserved site (InterPro:IPR019926), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: R-protein L3 B (TAIR:AT1G61580.1). & (reliability: 1338.0) &  (original description: no original description)","protein_coding"
"PSME_00046409-RA","No alias","Pseudotsuga menziesii","(at4g29670 : 220.0) Encodes a member of the thioredoxin family protein.  Located in the chloroplast.  Shows high activity towards the chloroplast 2-Cys peroxiredoxin A, and poor activity towards the chloroplast NADP-malate   dehydrogenase.; atypical CYS  HIS rich thioredoxin 2 (ACHT2); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937); BEST Arabidopsis thaliana protein match is: atypical CYS  HIS rich thioredoxin 1 (TAIR:AT4G26160.1); Has 5219 Blast hits to 5209 proteins in 1205 species: Archae - 70; Bacteria - 1917; Metazoa - 873; Fungi - 538; Plants - 961; Viruses - 3; Other Eukaryotes - 857 (source: NCBI BLink). & (reliability: 440.0) &  (original description: no original description)","protein_coding"
"PSME_00047055-RA","No alias","Pseudotsuga menziesii","(at3g21690 : 503.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT1G61890.1); Has 11325 Blast hits to 11232 proteins in 2038 species: Archae - 269; Bacteria - 8227; Metazoa - 142; Fungi - 332; Plants - 1357; Viruses - 0; Other Eukaryotes - 998 (source: NCBI BLink). & (reliability: 1006.0) &  (original description: no original description)","protein_coding"
"PSME_00047156-RA","No alias","Pseudotsuga menziesii","(at5g61990 : 541.0) Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G59900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q76c99|rf1_orysa : 373.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1082.0) &  (original description: no original description)","protein_coding"
"PSME_00048279-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00048646-RA","No alias","Pseudotsuga menziesii","(at4g17560 : 115.0) Ribosomal protein L19 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, chloroplast stroma, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L19 (InterPro:IPR001857); BEST Arabidopsis thaliana protein match is: Ribosomal protein L19 family protein (TAIR:AT5G47190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p82413|rk19_spiol : 109.0) 50S ribosomal protein L19, chloroplast precursor (CL19) - Spinacia oleracea (Spinach) & (reliability: 230.0) &  (original description: no original description)","protein_coding"
"PSME_00049617-RA","No alias","Pseudotsuga menziesii","(at5g27280 : 166.0) Zim17-type zinc finger protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, Zim17-type (InterPro:IPR007853); BEST Arabidopsis thaliana protein match is: Zim17-type zinc finger protein (TAIR:AT1G68730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 332.0) &  (original description: no original description)","protein_coding"
"PSME_00049784-RA","No alias","Pseudotsuga menziesii","(at3g26740 : 96.3) transcripts are  differentially regulated at the level of mRNA stability at different times of day controlled by the circadian clock. mRNAs are targets of the mRNA degradation pathway mediated by the downstream (DST) instability determinant.; CCR-like (CCL); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Light regulated Lir1 (InterPro:IPR009856); Has 69 Blast hits to 69 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 192.6) &  (original description: no original description)","protein_coding"
"PSME_00049908-RA","No alias","Pseudotsuga menziesii","(at3g57680 : 272.0) Peptidase S41 family protein; FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: proteolysis, intracellular signaling pathway; LOCATED IN: chloroplast thylakoid lumen, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S41 (InterPro:IPR005151), PDZ/DHR/GLGF (InterPro:IPR001478), Peptidase S41A, C-terminal peptidase (InterPro:IPR004447); BEST Arabidopsis thaliana protein match is: Peptidase S41 family protein (TAIR:AT4G17740.2); Has 8999 Blast hits to 8993 proteins in 1973 species: Archae - 1; Bacteria - 5400; Metazoa - 54; Fungi - 0; Plants - 152; Viruses - 0; Other Eukaryotes - 3392 (source: NCBI BLink). & (reliability: 544.0) &  (original description: no original description)","protein_coding"
"PSME_00051396-RA","No alias","Pseudotsuga menziesii","(at4g18160 : 279.0) Encodes AtTPK3 (KCO6), a member of the Arabidopsis thaliana K+ channel family of AtTPK/KCO proteins.AtTPK3 is targeted to the vacuolar membrane. May form homomeric ion channels in vivo.; Ca2+ activated outward rectifying K+ channel 6 (KCO6); FUNCTIONS IN: outward rectifier potassium channel activity; INVOLVED IN: potassium ion transport; LOCATED IN: plant-type vacuole membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Potassium channel, two pore-domain (InterPro:IPR003280), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Ion transport 2 (InterPro:IPR013099); BEST Arabidopsis thaliana protein match is: Ca2+ activated outward rectifying K+ channel 2 (TAIR:AT5G46370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 558.0) &  (original description: no original description)","protein_coding"
"PSME_00052595-RA","No alias","Pseudotsuga menziesii","(at1g17455 : 141.0) ELF4-like 4 (ELF4-L4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1313 (InterPro:IPR009741); BEST Arabidopsis thaliana protein match is: ELF4-like 2 (TAIR:AT1G72630.1); Has 149 Blast hits to 148 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 148; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 282.0) &  (original description: no original description)","protein_coding"
"PSME_00052976-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00053254-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00053862-RA","No alias","Pseudotsuga menziesii","(at5g18260 : 98.2) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G14180.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 196.4) &  (original description: no original description)","protein_coding"
"PSME_00054549-RA","No alias","Pseudotsuga menziesii","(at5g03560 : 171.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: nucleobase:cation symporter activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G38150.2); Has 33122 Blast hits to 10382 proteins in 236 species: Archae - 3; Bacteria - 11; Metazoa - 102; Fungi - 213; Plants - 32082; Viruses - 0; Other Eukaryotes - 711 (source: NCBI BLink). & (reliability: 342.0) &  (original description: no original description)","protein_coding"
"PSME_00054856-RA","No alias","Pseudotsuga menziesii","(at4g18160 : 286.0) Encodes AtTPK3 (KCO6), a member of the Arabidopsis thaliana K+ channel family of AtTPK/KCO proteins.AtTPK3 is targeted to the vacuolar membrane. May form homomeric ion channels in vivo.; Ca2+ activated outward rectifying K+ channel 6 (KCO6); FUNCTIONS IN: outward rectifier potassium channel activity; INVOLVED IN: potassium ion transport; LOCATED IN: plant-type vacuole membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Potassium channel, two pore-domain (InterPro:IPR003280), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Ion transport 2 (InterPro:IPR013099); BEST Arabidopsis thaliana protein match is: Ca2+ activated outward rectifying K+ channel 2 (TAIR:AT5G46370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 572.0) &  (original description: no original description)","protein_coding"
"PSME_00055002-RA","No alias","Pseudotsuga menziesii","(at2g29670 : 310.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G07280.3); Has 535 Blast hits to 340 proteins in 62 species: Archae - 10; Bacteria - 119; Metazoa - 2; Fungi - 0; Plants - 351; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (reliability: 620.0) &  (original description: no original description)","protein_coding"
"PSME_00055637-RA","No alias","Pseudotsuga menziesii","(p26413|hsp70_soybn : 1016.0) Heat shock 70 kDa protein - Glycine max (Soybean) & (at3g12580 : 1004.0) heat shock protein 70 (HSP70); FUNCTIONS IN: ATP binding; INVOLVED IN: in 9 processes; LOCATED IN: cytosol, mitochondrion, cell wall, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock cognate protein 70-1 (TAIR:AT5G02500.1); Has 34126 Blast hits to 33731 proteins in 4830 species: Archae - 159; Bacteria - 16481; Metazoa - 3906; Fungi - 1752; Plants - 1258; Viruses - 310; Other Eukaryotes - 10260 (source: NCBI BLink). & (reliability: 2008.0) &  (original description: no original description)","protein_coding"
"PSME_00056751-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"Seita.1G011400.1","No alias","Setaria italica ","endoribonuclease *(RNase Z)","protein_coding"
"Seita.1G048900.1","No alias","Setaria italica ","ketoacyl-ACP synthase *(mtKAS))","protein_coding"
"Seita.1G075400.1","No alias","Setaria italica ","urease accessory protein *(UreF)","protein_coding"
"Seita.1G137200.1","No alias","Setaria italica ","component *(MIS12) of kinetochore MIS12 complex","protein_coding"
"Seita.1G161300.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G253200.1","No alias","Setaria italica ","glutaredoxin","protein_coding"
"Seita.1G316100.1","No alias","Setaria italica ","alpha-1,2 exomannosidase *(MNL) & EC_3.2 glycosylase","protein_coding"
"Seita.1G316400.1","No alias","Setaria italica ","solute transporter *(NAT)","protein_coding"
"Seita.1G326300.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G326700.1","No alias","Setaria italica ","mTERF-type transcription factor","protein_coding"
"Seita.1G374900.1","No alias","Setaria italica ","sucrose transporter & sugar transporter *(SUT/SUC)","protein_coding"
"Seita.2G004800.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G047900.1","No alias","Setaria italica ","small solute transporter *(BT1)","protein_coding"
"Seita.2G054600.1","No alias","Setaria italica ","phosphopantetheine adenylyl transferase","protein_coding"
"Seita.2G215300.1","No alias","Setaria italica ","component *(ARID5) of ISWI chromatin remodeling complex","protein_coding"
"Seita.2G239600.1","No alias","Setaria italica ","class tau glutathione S-transferase","protein_coding"
"Seita.2G299000.1","No alias","Setaria italica ","SMARCI component *(BRD) of SWI/SNF chromatin remodeling complex","protein_coding"
"Seita.2G354500.1","No alias","Setaria italica ","mevalonate kinase *(MVK) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.2G356400.1","No alias","Setaria italica ","EC_2.4 glycosyltransferase","protein_coding"
"Seita.3G106600.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G108100.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G117100.1","No alias","Setaria italica ","component *(SNL) of histone deacetylase machineries","protein_coding"
"Seita.3G131600.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G182300.1","No alias","Setaria italica ","CLE precursor polypeptide","protein_coding"
"Seita.3G221200.1","No alias","Setaria italica ","component *(PSF1) of GINS DNA replication fork maintenance complex","protein_coding"
"Seita.3G325300.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G369800.1","No alias","Setaria italica ","regulatory protein *(ADR) of TNL-mediated effector-triggered immunity","protein_coding"
"Seita.4G238600.1","No alias","Setaria italica ","regulatory component B of PP2A phosphatase complexes","protein_coding"
"Seita.4G287700.1","No alias","Setaria italica ","component *(EH1/EH2) of TPLATE AP-2 co-adaptor complex","protein_coding"
"Seita.5G032700.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G064900.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G071500.1","No alias","Setaria italica ","component *(MED17) of head module of MEDIATOR transcription co-activator complex","protein_coding"
"Seita.5G121900.1","No alias","Setaria italica ","EC_3.1 hydrolase acting on ester bond & phospholipase-D *(PLD-alpha)","protein_coding"
"Seita.5G123500.1","No alias","Setaria italica ","glutaredoxin maturation factor (GRXS15) of iron-sulfur cluster assembly machinery","protein_coding"
"Seita.5G155100.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G377900.1","No alias","Setaria italica ","component *(Fts3/10) of FtsH3/10 matrix-AAA protease heterodimers","protein_coding"
"Seita.5G407700.1","No alias","Setaria italica ","NAC-type transcription factor","protein_coding"
"Seita.5G409300.1","No alias","Setaria italica ","meiotic crossover scaffold protein *(SPO22/ZIP4)","protein_coding"
"Seita.5G414800.1","No alias","Setaria italica ","mitotic-specific Kleisin-type component *(SCC1) of cohesin regulator complex","protein_coding"
"Seita.5G452000.1","No alias","Setaria italica ","class tau glutathione S-transferase","protein_coding"
"Seita.6G091100.1","No alias","Setaria italica ","phosphopantetheinyl transferase *(mtPPT))","protein_coding"
"Seita.6G117700.1","No alias","Setaria italica ","WAK/WAKL protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.6G133500.1","No alias","Setaria italica ","Golgin-type membrane tethering protein *(GC3/GC4)","protein_coding"
"Seita.6G231400.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.7G128900.1","No alias","Setaria italica ","URK-2 protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.7G179700.1","No alias","Setaria italica ","DDX6-type mRNA helicase *(RH12/RH8)","protein_coding"
"Seita.7G195100.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.7G223400.1","No alias","Setaria italica ","clathrin cargo adaptor *(Epsin)","protein_coding"
"Seita.8G113000.1","No alias","Setaria italica ","ribosome biogenesis GTPase *(SIN2)","protein_coding"
"Seita.8G145000.1","No alias","Setaria italica ","component *(MIP1) of DSL1 (Depends-on-SLY1) complex","protein_coding"
"Seita.8G244800.1","No alias","Setaria italica ","succinate dehydrogenase flavinylation factor *(SDHAF2)","protein_coding"
"Seita.9G031800.1","No alias","Setaria italica ","GRAS-type transcription factor","protein_coding"
"Seita.9G039500.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G043500.1","No alias","Setaria italica ","EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.9G054400.1","No alias","Setaria italica ","MYB class-R2R3 transcription factor","protein_coding"
"Seita.9G058100.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G138300.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G200400.1","No alias","Setaria italica ","DDX6-type mRNA helicase *(RH12/RH8)","protein_coding"
"Seita.9G210400.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G210500.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G248800.1","No alias","Setaria italica ","component *(eS7) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Seita.9G286700.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G396200.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G455100.1","No alias","Setaria italica ","RNA-cap-binding factor (4EHP)","protein_coding"
"Seita.9G481100.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G487900.1","No alias","Setaria italica ","alpha-Tubulin component *(TUA) of alpha-beta-Tubulin heterodimer","protein_coding"
"Seita.9G544900.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G552300.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G575100.1","No alias","Setaria italica ","valine/leucine/isoleucine aminotransferase & branched-chain aminotransferase *(BCAT) & valine/leucine/isoleucine aminotransferase & EC_2.6 transferase transferring nitrogenous group","protein_coding"
"Seita.J000100.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Sobic.001G048700.1","No alias","Sorghum bicolor ","Rab GTPase-activating protein","protein_coding"
"Sobic.001G081000.1","No alias","Sorghum bicolor ","assembly factor INDL of mitochondrial ISC system transfer phase","protein_coding"
"Sobic.001G090400.1","No alias","Sorghum bicolor ","methylation reader component *(ING1)","protein_coding"
"Sobic.001G136600.1","No alias","Sorghum bicolor ","regulatory component B1 of PP2A phosphatase complexes","protein_coding"
"Sobic.001G233532.1","No alias","Sorghum bicolor ","E2 ubiquitin-conjugating enzyme *(UBC4) & ubiquitin-conjugating component *(GID3) of GID ubiquitination complex","protein_coding"
"Sobic.001G277900.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G340000.3","No alias","Sorghum bicolor ","E3 ubiquitin ligase *(HUB)","protein_coding"
"Sobic.001G425800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G497500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G514900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G095700.2","No alias","Sorghum bicolor ","substrate adaptor of CUL3-based E3 ubiquitin ligase complex & substrate(LHP1) adaptor of CUL3-BTB E3 ubiquitin ligase","protein_coding"
"Sobic.002G203600.1","No alias","Sorghum bicolor ","plant-specific E3 ubiquitin ligase *(RSL/RFA)","protein_coding"
"Sobic.002G256200.1","No alias","Sorghum bicolor ","regulatory protein *(CYCC) of cell cycle & component *(CycC) of kinase module of MEDIATOR transcription co-activator complex","protein_coding"
"Sobic.002G306400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G330300.1","No alias","Sorghum bicolor ","GRAS-type transcription factor","protein_coding"
"Sobic.002G375300.1","No alias","Sorghum bicolor ","auxiliary VPS23-interacting component *(CFS1) of ESCRT-I complex","protein_coding"
"Sobic.002G396500.1","No alias","Sorghum bicolor ","SAGA complex assembly platform component *(TRA1) & component *(TRA1) of SAGA transcription co-activator complex","protein_coding"
"Sobic.002G399500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G048000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G093800.1","No alias","Sorghum bicolor ","component *(eIF3a) of eIF3 mRNA-to-PIC binding complex","protein_coding"
"Sobic.003G110400.1","No alias","Sorghum bicolor ","component *(NSH2) of NSH1-NSH2 nucleoside hydrolase heterodimer","protein_coding"
"Sobic.003G182300.2","No alias","Sorghum bicolor ","E3 ubiquitin ligase *(SIS3)","protein_coding"
"Sobic.003G188300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G190900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G255700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G361600.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G384100.1","No alias","Sorghum bicolor ","meiotic crossover scaffold protein *(SPO22/ZIP4)","protein_coding"
"Sobic.003G386500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G072100.1","No alias","Sorghum bicolor ","component *(MIP1) of DSL1 (Depends-on-SLY1) complex","protein_coding"
"Sobic.004G083700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G140600.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G156800.1","No alias","Sorghum bicolor ","RNA pseudouridine synthase *(PUS7)","protein_coding"
"Sobic.004G204000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G205600.1","No alias","Sorghum bicolor ","transcriptional co-activator *(BET/GTE)","protein_coding"
"Sobic.004G317100.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G338500.1","No alias","Sorghum bicolor ","histone demethylase *(PKDM7)","protein_coding"
"Sobic.004G357200.1","No alias","Sorghum bicolor ","regulatory protein *(ZC11A) of mRNA export","protein_coding"
"Sobic.005G007800.1","No alias","Sorghum bicolor ","substrate adaptor *(RAE1) of SCF E3 ubiquitin ligase complex","protein_coding"
"Sobic.005G025300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.005G036700.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.005G152000.1","No alias","Sorghum bicolor ","tyrosine aminotransferase *(TAT) & EC_2.6 transferase transferring nitrogenous group","protein_coding"
"Sobic.005G232000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G009400.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G110600.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G256200.5","No alias","Sorghum bicolor ","GARP subgroup PHL transcription factor","protein_coding"
"Sobic.006G271000.1","No alias","Sorghum bicolor ","component *(MIS12) of kinetochore MIS12 complex","protein_coding"
"Sobic.007G049800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.007G130300.1","No alias","Sorghum bicolor ","component *(SHL/EBS) of PRC1 complex","protein_coding"
"Sobic.007G130600.1","No alias","Sorghum bicolor ","subunit beta of methylcrotonoyl-CoA carboxylase complex","protein_coding"
"Sobic.007G146001.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.007G159200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.007G169300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.007G193700.1","No alias","Sorghum bicolor ","threonylcarbamoyl-AMP synthase","protein_coding"
"Sobic.007G227000.1","No alias","Sorghum bicolor ","bifunctional GTP cyclohydrolase II *(RibA) and DHBP synthase *(RibB) & EC_3.5 hydrolase acting on carbon-nitrogen bond, other than peptide bond","protein_coding"
"Sobic.008G066800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.008G106800.1","No alias","Sorghum bicolor ","pinoresinol/lariciresinol reductase *(PLR) & EC_1.3 oxidoreductase acting on CH-CH group of donor","protein_coding"
"Sobic.008G126200.1","No alias","Sorghum bicolor ","regulatory protein *(CBP60) of systemic acquired resistance","protein_coding"
"Sobic.009G054700.1","No alias","Sorghum bicolor ","component *(GID9) of GID ubiquitination complex","protein_coding"
"Sobic.009G079500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G103600.1","No alias","Sorghum bicolor ","transcription initiation factor *(CCG/MEE12)","protein_coding"
"Sobic.009G117900.3","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G194000.1","No alias","Sorghum bicolor ","mannosyltransferase-III *(PIG-B)","protein_coding"
"Sobic.009G237500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.010G037800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.010G072800.2","No alias","Sorghum bicolor ","nucleocytoplasmic export karyopherin *(XPO7)","protein_coding"
"Sobic.010G147600.1","No alias","Sorghum bicolor ","ER-tubule curvature-inducing protein *(Reticulon)","protein_coding"
"Sobic.010G151900.2","No alias","Sorghum bicolor ","component *(RPP29/POP4) of RNA-dependent RNase P complex","protein_coding"
"Sobic.010G226700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.010G245100.1","No alias","Sorghum bicolor ","L-lectin protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.010G271901.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.K042000.1","No alias","Sorghum bicolor ","EC_3.2 glycosylase & glucosylceramidase *(GCD)","protein_coding"
"Solyc01g006970","No alias","Solanum lycopersicum","RNA helicase family protein (AHRD V3.3 *** AT2G35920.2)","protein_coding"
"Solyc01g010650","No alias","Solanum lycopersicum","UDP-galactose transporter, putative (AHRD V3.3 *** B9S297_RICCO)","protein_coding"
"Solyc01g014560","No alias","Solanum lycopersicum","Serine/threonine-protein kinase (AHRD V3.3 *** K4ASL8_SOLLC)","protein_coding"
"Solyc01g016770","No alias","Solanum lycopersicum","Transcription factor Myb (AHRD V3.3 *-* Q71KV1_CAPAN)","protein_coding"
"Solyc01g020240","No alias","Solanum lycopersicum","THUMP domain-containing protein 1 (AHRD V3.3 *** A0A1D1ZBW7_9ARAE)","protein_coding"
"Solyc01g022790","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc01g056930","No alias","Solanum lycopersicum","LOW QUALITY:Ycf1 (AHRD V3.3 *-* A0A0C5C9W8_SOLLC)","protein_coding"
"Solyc01g057340","No alias","Solanum lycopersicum","WD-40 repeat family protein-2 (AHRD V3.3 --* A0A172CCS3_POPTO)","protein_coding"
"Solyc01g060490","No alias","Solanum lycopersicum","GATA transcription factor, putative (AHRD V3.3 *** B9RZK8_RICCO)","protein_coding"
"Solyc01g067390","No alias","Solanum lycopersicum","RNA helicase DEAH-box1","protein_coding"
"Solyc01g067760","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc01g068360","No alias","Solanum lycopersicum","Protein kinase (AHRD V3.3 *** Q2HVC0_MEDTR)","protein_coding"
"Solyc01g073920","No alias","Solanum lycopersicum","Hydroxyproline-rich glycoprotein (AHRD V3.3 *** B9N6I3_POPTR)","protein_coding"
"Solyc01g079500","No alias","Solanum lycopersicum","Vps51/Vps67 family (components of vesicular transport) protein (AHRD V3.3 *** AT4G02030.1)","protein_coding"
"Solyc01g079520","No alias","Solanum lycopersicum","DNA mismatch repair protein (AHRD V3.3 *** Q6DQL6_PETHY)","protein_coding"
"Solyc01g080120","No alias","Solanum lycopersicum","cytochrome P450 family protein (AHRD V3.3 *** AT3G06150.1)","protein_coding"
"Solyc01g080850","No alias","Solanum lycopersicum","Protein transport protein SEC23 (AHRD V3.3 *** W9QYF9_9ROSA)","protein_coding"
"Solyc01g086690","No alias","Solanum lycopersicum","LOW QUALITY:Sister chromatid cohesion 1 protein 3 (AHRD V3.3 *** W9R9I5_9ROSA)","protein_coding"
"Solyc01g088380","No alias","Solanum lycopersicum","DNA replication helicase (AHRD V3.3 *** AT1G08840.4)","protein_coding"
"Solyc01g090840","No alias","Solanum lycopersicum","Zinc finger family protein (AHRD V3.3 *** B9GPC0_POPTR)","protein_coding"
"Solyc01g091340","No alias","Solanum lycopersicum","Peptidyl-prolyl cis-trans isomerase (AHRD V3.3 *-* A0A0K9P1Y7_ZOSMR)","protein_coding"
"Solyc01g094370","No alias","Solanum lycopersicum","remorin 2","protein_coding"
"Solyc01g094690","No alias","Solanum lycopersicum","plasma membrane intrinsic protein 1.2","protein_coding"
"Solyc01g095150","No alias","Solanum lycopersicum","late embryogenesis-like protein","protein_coding"
"Solyc01g096220","No alias","Solanum lycopersicum","Ras-related protein RABA3 (AHRD V3.3 *** A0A0B2Q7Y9_GLYSO)","protein_coding"
"Solyc01g096610","No alias","Solanum lycopersicum","UPF0468 protein CG5343 (AHRD V3.3 *** A0A0B2SV55_GLYSO)","protein_coding"
"Solyc01g097870","No alias","Solanum lycopersicum","40S ribosomal protein S24 (AHRD V3.3 *** K4B0H4_SOLLC)","protein_coding"
"Solyc01g099300","No alias","Solanum lycopersicum","MORC family CW-type zinc finger protein 4 (AHRD V3.3 *** A0A0B0PTV2_GOSAR)","protein_coding"
"Solyc01g100600","No alias","Solanum lycopersicum","Kelch repeat protein, putative (AHRD V3.3 *** B9RFJ9_RICCO)","protein_coding"
"Solyc01g101030","No alias","Solanum lycopersicum","FACT complex subunit SPT16 (AHRD V3.3 *** W9RSN6_9ROSA)","protein_coding"
"Solyc01g102560","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc01g103460","No alias","Solanum lycopersicum","LOW QUALITY:Werner Syndrome-like exonuclease (AHRD V3.3 *** W9SHU8_9ROSA)","protein_coding"
"Solyc01g104520","No alias","Solanum lycopersicum","At3g54630 (AHRD V3.3 *-* A4FVQ9_ARATH)","protein_coding"
"Solyc01g105520","No alias","Solanum lycopersicum","DNA helicase (AHRD V3.3 *** I1Q0P7_ORYGL)","protein_coding"
"Solyc01g106330","No alias","Solanum lycopersicum","fatty acid amide hydrolase (AHRD V3.3 *** AT5G64440.1)","protein_coding"
"Solyc01g107630","No alias","Solanum lycopersicum","Cell division cycle protein 123 like (AHRD V3.3 *** A0A0B2SWE7_GLYSO)","protein_coding"
"Solyc01g109030","No alias","Solanum lycopersicum","transcriptional factor B3 family protein (AHRD V3.3 *-* AT4G31640.1)","protein_coding"
"Solyc01g109290","No alias","Solanum lycopersicum","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding"
"Solyc01g109660","No alias","Solanum lycopersicum","meloidogyne-induced giant cell protein DB275","protein_coding"
"Solyc01g109960","No alias","Solanum lycopersicum","SUMO-activating enzyme 2 (AHRD V3.3 *** AT2G21470.1)","protein_coding"
"Solyc01g110380","No alias","Solanum lycopersicum","Kinesin-like protein (AHRD V3.3 *** K4B3Q1_SOLLC)","protein_coding"
"Solyc01g111060","No alias","Solanum lycopersicum","5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase (AHRD V3.3 *** G7J8G7_MEDTR)","protein_coding"
"Solyc01g112080","No alias","Solanum lycopersicum","LysM domain GPI-anchored protein (AHRD V3.3 *** G8A1U1_MEDTR)","protein_coding"
"Solyc02g021550","No alias","Solanum lycopersicum","Eukaryotic translation initiation factor 4E (AHRD V3.3 *** Q00LS7_NICBE)","protein_coding"
"Solyc02g036340","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc02g043850","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc02g055460","No alias","Solanum lycopersicum","Protein disulfide-isomerase (AHRD V3.3 *** A0A0B2RKB0_GLYSO)","protein_coding"
"Solyc02g063520","No alias","Solanum lycopersicum","Homeobox-leucine zipper protein family (AHRD V3.3 *** AT4G37790.1)","protein_coding"
"Solyc02g067560","No alias","Solanum lycopersicum","Receptor-like kinase (AHRD V3.3 *** A0A0K9P790_ZOSMR)","protein_coding"
"Solyc02g068760","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9SQ91_RICCO)","protein_coding"
"Solyc02g069820","No alias","Solanum lycopersicum","kxDL motif protein (AHRD V3.3 *** AT3G29130.2)","protein_coding"
"Solyc02g069940","No alias","Solanum lycopersicum","WPP domain associated protein","protein_coding"
"Solyc02g070040","No alias","Solanum lycopersicum","LOW QUALITY:Ethylene-responsive nuclear protein (AHRD V3.3 *** Q38MV1_SOLLC)","protein_coding"
"Solyc02g070590","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc02g070680","No alias","Solanum lycopersicum","Cytochrome b561-related family protein (AHRD V3.3 *** A9PIJ8_POPTR)","protein_coding"
"Solyc02g070780","No alias","Solanum lycopersicum","DNA helicase (AHRD V3.3 *** K4B859_SOLLC)","protein_coding"
"Solyc02g071880","No alias","Solanum lycopersicum","Receptor-like protein kinase (AHRD V3.3 *** B9I1R1_POPTR)","protein_coding"
"Solyc02g076720","No alias","Solanum lycopersicum","Phosphoribosylformylglycinamidine synthase family protein (AHRD V3.3 *** B9HT78_POPTR)","protein_coding"
"Solyc02g078300","No alias","Solanum lycopersicum","Transcription initiation factor TFIID subunit 13 (AHRD V3.3 *** A0A0B0MGR7_GOSAR)","protein_coding"
"Solyc02g078530","No alias","Solanum lycopersicum","Kinase family protein (AHRD V3.3 *** B9IG83_POPTR)","protein_coding"
"Solyc02g078780","No alias","Solanum lycopersicum","Kinase (AHRD V3.3 *** A0A0K9P5P6_ZOSMR)","protein_coding"
"Solyc02g079480","No alias","Solanum lycopersicum","FAD-binding Berberine family protein (AHRD V3.3 *** AT4G20860.1)","protein_coding"
"Solyc02g079540","No alias","Solanum lycopersicum","Serine/threonine-protein kinase (AHRD V3.3 *** E5D7E5_TOBAC)","protein_coding"
"Solyc02g080420","No alias","Solanum lycopersicum","RNA-binding family protein (AHRD V3.3 *** A0A061FD24_THECC)","protein_coding"
"Solyc02g082250","No alias","Solanum lycopersicum","Thioredoxin reductase (AHRD V3.3 *** K4BA95_SOLLC)","protein_coding"
"Solyc02g082340","No alias","Solanum lycopersicum","RNA polymerase I specific transcription initiation factor RRN3 protein (AHRD V3.3 *** AT2G34750.1)","protein_coding"
"Solyc02g083600","No alias","Solanum lycopersicum","Cell cycle checkpoint protein RAD17 (AHRD V3.3 *** W9SMX8_9ROSA)","protein_coding"
"Solyc02g084720","No alias","Solanum lycopersicum","beta-galactosidase 6","protein_coding"
"Solyc02g084980","No alias","Solanum lycopersicum","Hexosyltransferase (AHRD V3.3 *** K4BB12_SOLLC)","protein_coding"
"Solyc02g085310","No alias","Solanum lycopersicum","plant invertase/pectin methylesterase inhibitor superfamily protein (AHRD V3.3 --* AT3G17227.1)","protein_coding"
"Solyc02g085390","No alias","Solanum lycopersicum","chromatin remodeling 1 (AHRD V3.3 *** AT5G66750.1)","protein_coding"
"Solyc02g085750","No alias","Solanum lycopersicum","LuxR family transcriptional regulator, putative (AHRD V3.3 *** A0A072U7J6_MEDTR)","protein_coding"
"Solyc02g086470","No alias","Solanum lycopersicum","Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A061EDJ2_THECC)","protein_coding"
"Solyc02g086660","No alias","Solanum lycopersicum","RNA helicase DEAD10","protein_coding"
"Solyc02g086850","No alias","Solanum lycopersicum","RNA exonuclease-like protein (AHRD V3.3 *** A0A072VJ45_MEDTR)","protein_coding"
"Solyc02g087440","No alias","Solanum lycopersicum","DUF248-1 (AHRD V3.3 --* A0A161CGG5_POPTO)","protein_coding"
"Solyc02g087580","No alias","Solanum lycopersicum","Actin cross-linking (AHRD V3.3 *** A0A103Y4S4_CYNCS)","protein_coding"
"Solyc02g088340","No alias","Solanum lycopersicum","WRKY transcription factor 3","protein_coding"
"Solyc02g088660","No alias","Solanum lycopersicum","BAG family molecular chaperone regulator 8, chloroplastic (AHRD V3.3 *** A0A0B0MGC2_GOSAR)","protein_coding"
"Solyc02g090180","No alias","Solanum lycopersicum","Prolyl oligopeptidase family protein (AHRD V3.3 *** AT5G66960.1)","protein_coding"
"Solyc02g090960","No alias","Solanum lycopersicum","Rapid alkalinization factor 3 (AHRD V3.3 *** Q6TF27_SOLCH)","protein_coding"
"Solyc02g091960","No alias","Solanum lycopersicum","Nuclear matrix constituent-like protein, putative (AHRD V3.3 *** A0A072UNX6_MEDTR)","protein_coding"
"Solyc02g092920","No alias","Solanum lycopersicum","heavy metal atpase 1 (AHRD V3.3 *** AT4G37270.1)","protein_coding"
"Solyc02g093400","No alias","Solanum lycopersicum","Protein MurJ (AHRD V3.3 *-* A0A1D1XN27_9ARAE)","protein_coding"
"Solyc02g093490","No alias","Solanum lycopersicum","SGF29 tudor-like domain-containing protein (AHRD V3.3 *** AT3G27460.1)","protein_coding"
"Solyc02g093600","No alias","Solanum lycopersicum","Class I heat shock protein (AHRD V3.3 *** F4YBC5_SOLNI)","protein_coding"
"Solyc02g093920","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc03g005020","No alias","Solanum lycopersicum","Lipase (AHRD V3.3 *** K4BDS6_SOLLC)","protein_coding"
"Solyc03g005030","No alias","Solanum lycopersicum","DSR6 (AHRD V3.3 *** A0A076V4W1_CAPAN)","protein_coding"
"Solyc03g005380","No alias","Solanum lycopersicum","Protein transport protein sec23, putative (AHRD V3.3 *** B9RTF3_RICCO)","protein_coding"
"Solyc03g005460","No alias","Solanum lycopersicum","Helicase protein with RING/U-box domain-containing protein (AHRD V3.3 *** AT5G43530.1)","protein_coding"
"Solyc03g006310","No alias","Solanum lycopersicum","nuclear fusion defective 6 (AHRD V3.3 *** AT2G20585.7)","protein_coding"
"Solyc03g006770","No alias","Solanum lycopersicum","Serine/threonine-protein kinase (AHRD V3.3 *** M1A226_SOLTU)","protein_coding"
"Solyc03g007800","No alias","Solanum lycopersicum","Protein timeless like (AHRD V3.3 *** A0A0B2QAC2_GLYSO)","protein_coding"
"Solyc03g007860","No alias","Solanum lycopersicum","Protein PAM68, chloroplastic (AHRD V3.3 *-* PAM68_ARATH)","protein_coding"
"Solyc03g025490","No alias","Solanum lycopersicum","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT4G23340.1)","protein_coding"
"Solyc03g025930","No alias","Solanum lycopersicum","F-box family protein (AHRD V3.3 *** B9I4C3_POPTR)","protein_coding"
"Solyc03g026100","No alias","Solanum lycopersicum","LOW QUALITY:Cytidine/deoxycytidylate deaminase family protein (AHRD V3.3 *** AT5G24670.4)","protein_coding"
"Solyc03g033390","No alias","Solanum lycopersicum","F-box family protein (AHRD V3.3 *** A0A061DGH5_THECC)","protein_coding"
"Solyc03g046590","No alias","Solanum lycopersicum","AUGMIN subunit 5 (AHRD V3.3 *** AUG5_ARATH)","protein_coding"
"Solyc03g063110","No alias","Solanum lycopersicum","Acyl-[acyl-carrier-protein] desaturase (AHRD V3.3 *** K0A7N8_SOLAC)","protein_coding"
"Solyc03g071570","No alias","Solanum lycopersicum","Pectate lyase (AHRD V3.3 *** K4BHI7_SOLLC)","protein_coding"
"Solyc03g082860","No alias","Solanum lycopersicum","Histone-lysine N-methyltransferase (AHRD V3.3 *** W9S1W1_9ROSA)","protein_coding"
"Solyc03g083480","No alias","Solanum lycopersicum","Membrane receptor-like protein 1 (AHRD V3.3 *** B3TJG2_CAPAN)","protein_coding"
"Solyc03g083530","No alias","Solanum lycopersicum","40S ribosomal protein S13 (AHRD V3.3 *** RS13_SOYBN)","protein_coding"
"Solyc03g095210","No alias","Solanum lycopersicum","Transducin/WD40 repeat protein (AHRD V3.3 *** G7IJ01_MEDTR)","protein_coding"
"Solyc03g095450","No alias","Solanum lycopersicum","RING/U-box superfamily protein (AHRD V3.3 *** AT5G01960.1)","protein_coding"
"Solyc03g095960","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9RF13_RICCO)","protein_coding"
"Solyc03g096070","No alias","Solanum lycopersicum","Phosphoinositide phospholipase C (AHRD V3.3 *** K4BJ29_SOLLC)","protein_coding"
"Solyc03g096830","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9S1X8_RICCO)","protein_coding"
"Solyc03g097110","No alias","Solanum lycopersicum","RNA-binding family protein isoform 1 (AHRD V3.3 *** A0A061EZK4_THECC)","protein_coding"
"Solyc03g111150","No alias","Solanum lycopersicum","Extracellular ligand-gated ion channel protein (AHRD V3.3 *** A0A072U3Z3_MEDTR)","protein_coding"
"Solyc03g111580","No alias","Solanum lycopersicum","Zinc finger transcription factor 27","protein_coding"
"Solyc03g112440","No alias","Solanum lycopersicum","Oleosin (AHRD V3.3 *** K4BK98_SOLLC)","protein_coding"
"Solyc03g112780","No alias","Solanum lycopersicum","LOW QUALITY:F-box family protein (AHRD V3.3 *-* B9H429_POPTR)","protein_coding"
"Solyc03g114270","No alias","Solanum lycopersicum","LOW QUALITY:DNA binding protein (AHRD V3.3 *** E5GC39_CUCME)","protein_coding"
"Solyc03g114520","No alias","Solanum lycopersicum","Kinetochore protein (AHRD V3.3 *** D0FYH3_NICTO)","protein_coding"
"Solyc03g114690","No alias","Solanum lycopersicum","WD-repeat protein, putative (AHRD V3.3 *** B9RVD7_RICCO)","protein_coding"
"Solyc03g115050","No alias","Solanum lycopersicum","Replication A 70 kDa DNA-binding subunit (AHRD V3.3 *** A0A0B0N129_GOSAR)","protein_coding"
"Solyc03g115390","No alias","Solanum lycopersicum","RNA helicase DEAH-box10","protein_coding"
"Solyc03g117440","No alias","Solanum lycopersicum","RNA helicase DEAD14","protein_coding"
"Solyc03g118770","No alias","Solanum lycopersicum","WUSCHEL-related homeobox 1-like protein (AHRD V3.3 *** A0A0B0P6I0_GOSAR)","protein_coding"
"Solyc03g119320","No alias","Solanum lycopersicum","LOW QUALITY:membrane-associated kinase regulator (AHRD V3.3 *** AT1G67050.1)","protein_coding"
"Solyc03g121310","No alias","Solanum lycopersicum","RWD domain-containing protein (AHRD V3.3 *** Q38HU0_SOLTU)","protein_coding"
"Solyc03g121440","No alias","Solanum lycopersicum","Kinase family protein (AHRD V3.3 *** U5GQI1_POPTR)","protein_coding"
"Solyc03g121790","No alias","Solanum lycopersicum","Epidermal patterning factor-like protein (AHRD V3.3 *** G7LI49_MEDTR)","protein_coding"
"Solyc03g122240","No alias","Solanum lycopersicum","Exocyst subunit EXO70 family protein (AHRD V3.3 *** B9N7F2_POPTR)","protein_coding"
"Solyc03g122260","No alias","Solanum lycopersicum","Small nuclear ribonucleoprotein family protein (AHRD V3.3 *** AT3G14080.2)","protein_coding"
"Solyc03g123840","No alias","Solanum lycopersicum","RNA-binding family protein (AHRD V3.3 *** A0A061GFC4_THECC)","protein_coding"
"Solyc04g005270","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc04g005290","No alias","Solanum lycopersicum","18S pre-ribosomal assembly protein gar2-like protein (AHRD V3.3 *-* AT2G03810.7)","protein_coding"
"Solyc04g005430","No alias","Solanum lycopersicum","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** AT1G78240.2)","protein_coding"
"Solyc04g005480","No alias","Solanum lycopersicum","LOW QUALITY:Nodulin-related protein 1, putative (AHRD V3.3 *** A0A061EHK7_THECC)","protein_coding"
"Solyc04g007700","No alias","Solanum lycopersicum","transmembrane protein (AHRD V3.3 *** AT1G14990.1)","protein_coding"
"Solyc04g007860","No alias","Solanum lycopersicum","ENTH/ANTH/VHS superfamily protein (AHRD V3.3 *** A0A061E7Q5_THECC)","protein_coding"
"Solyc04g008010","No alias","Solanum lycopersicum","Protein VAC14 like (AHRD V3.3 *** A0A0B2Q990_GLYSO)","protein_coding"
"Solyc04g008600","No alias","Solanum lycopersicum","Zinc knuckle family protein (AHRD V3.3 *** B9HVL9_POPTR)","protein_coding"
"Solyc04g008870","No alias","Solanum lycopersicum","Myb family transcription factor family protein (AHRD V3.3 *** B9H5N1_POPTR)","protein_coding"
"Solyc04g011580","No alias","Solanum lycopersicum","Pumilio, putative (AHRD V3.3 *** B9SDY2_RICCO)","protein_coding"
"Solyc04g014390","No alias","Solanum lycopersicum","60S ribosomal protein L51, mitochondrial (AHRD V3.3 *** A0A0B2SGQ7_GLYSO)","protein_coding"
"Solyc04g015180","No alias","Solanum lycopersicum","DNA-directed RNA polymerase II subunit rpb4 (AHRD V3.3 *** A0A151T6X0_CAJCA)","protein_coding"
"Solyc04g017610","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc04g045530","No alias","Solanum lycopersicum","DNA primase large subunit (AHRD V3.3 *** K4BRI2_SOLLC)","protein_coding"
"Solyc04g051700","No alias","Solanum lycopersicum","Ras-related small GTP-binding family protein (AHRD V3.3 *** AT5G64813.3)","protein_coding"
"Solyc04g054430","No alias","Solanum lycopersicum","Retrovirus-related Pol polyprotein from transposon 17.6 (AHRD V3.3 --* A0A151SX10_CAJCA)","protein_coding"
"Solyc04g054690","No alias","Solanum lycopersicum","ascorbate oxidase","protein_coding"
"Solyc04g054790","No alias","Solanum lycopersicum","Domain of Uncharacterized protein function, putative (AHRD V3.3 *-* A0A061GWB6_THECC)","protein_coding"
"Solyc04g055110","No alias","Solanum lycopersicum","ARM-repeat/Tetratricopeptide repeat (TPR)-containing protein","protein_coding"
"Solyc04g056410","No alias","Solanum lycopersicum","DNA repair/recombination protein (AHRD V3.3 *** AT3G19210.1)","protein_coding"
"Solyc04g064830","No alias","Solanum lycopersicum","transcriptional factor B3 family protein (AHRD V3.3 *** AT4G31690.1)","protein_coding"
"Solyc04g071280","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing family protein (AHRD V3.3 *** U5GR08_POPTR)","protein_coding"
"Solyc04g071310","No alias","Solanum lycopersicum","CDK-activating kinase assembly factor-related","protein_coding"
"Solyc04g072120","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc04g075000","No alias","Solanum lycopersicum","Kinase family protein (AHRD V3.3 *** D7KCW3_ARALL)","protein_coding"
"Solyc04g076060","No alias","Solanum lycopersicum","tft10","protein_coding"
"Solyc04g076320","No alias","Solanum lycopersicum","argininosuccinate lyase","protein_coding"
"Solyc04g078550","No alias","Solanum lycopersicum","WRKY transcription factor 7","protein_coding"
"Solyc04g078820","No alias","Solanum lycopersicum","annexin 7","protein_coding"
"Solyc04g079270","No alias","Solanum lycopersicum","Sorting and assembly machinery component 50 like (AHRD V3.3 *** A0A0B2S280_GLYSO)","protein_coding"
"Solyc04g080360","No alias","Solanum lycopersicum","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** AT1G19430.3)","protein_coding"
"Solyc04g082450","No alias","Solanum lycopersicum","integral membrane hemolysin-III-like protein (AHRD V3.3 *-* AT2G45250.1)","protein_coding"
"Solyc05g005770","No alias","Solanum lycopersicum","NHL repeat-containing protein (AHRD V3.3 *** D7KNK1_ARALL)","protein_coding"
"Solyc05g007150","No alias","Solanum lycopersicum","UDP-galactose transporter, putative (AHRD V3.3 *** B9S297_RICCO)","protein_coding"
"Solyc05g007290","No alias","Solanum lycopersicum","Regulator of chromosome condensation (RCC1) family protein (AHRD V3.3 *** G7K368_MEDTR)","protein_coding"
"Solyc05g007450","No alias","Solanum lycopersicum","Origin recognition complex, subunit 6 (AHRD V3.3 *** A0A118K386_CYNCS)","protein_coding"
"Solyc05g007930","No alias","Solanum lycopersicum","Beta-1,3-galactosyltransferase-like protein (AHRD V3.3 *** G7KFC0_MEDTR)","protein_coding"
"Solyc05g007960","No alias","Solanum lycopersicum","O-fucosyltransferase family protein (AHRD V3.3 *** AT2G01480.1)","protein_coding"
"Solyc05g008610","No alias","Solanum lycopersicum","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT3G18210.2)","protein_coding"
"Solyc05g008780","No alias","Solanum lycopersicum","PROTON PUMP INTERACTOR 1 family protein (AHRD V3.3 *-* U5GXF2_POPTR)","protein_coding"
"Solyc05g008860","No alias","Solanum lycopersicum","Non-specific serine/threonine protein kinase (AHRD V3.3 *** K4BX60_SOLLC)","protein_coding"
"Solyc05g009160","No alias","Solanum lycopersicum","Chaperone protein dnaJ 15 (AHRD V3.3 *** DNJ15_ARATH)","protein_coding"
"Solyc05g009660","No alias","Solanum lycopersicum","Transcription factor PERIANTHIA-like protein (AHRD V3.3 *** A0A0B0NQX8_GOSAR)","protein_coding"
"Solyc05g012060","No alias","Solanum lycopersicum","Histone-lysine N-methyltransferase ATX1, putative isoform 2 (AHRD V3.3 *-* A0A061E9H7_THECC)","protein_coding"
"Solyc05g013290","No alias","Solanum lycopersicum","Fenthion sensitivity","protein_coding"
"Solyc05g013650","No alias","Solanum lycopersicum","LOW QUALITY:lysine ketoglutarate reductase trans-splicing protein (DUF707) (AHRD V3.3 *** AT1G67850.7)","protein_coding"
"Solyc05g014240","No alias","Solanum lycopersicum","Leucine-rich repeat protein kinase family protein (AHRD V3.3 *** AT1G67720.1)","protein_coding"
"Solyc05g014540","No alias","Solanum lycopersicum","DNA polymerase alpha subunit B (AHRD V3.3 *** K4BYH3_SOLLC)","protein_coding"
"Solyc05g014690","No alias","Solanum lycopersicum","RNA helicase DEAH-box14","protein_coding"
"Solyc05g014710","No alias","Solanum lycopersicum","Remorin family protein (AHRD V3.3 *** A0A061E752_THECC)","protein_coding"
"Solyc05g018320","No alias","Solanum lycopersicum","arabinogalactan","protein_coding"
"Solyc05g032880","No alias","Solanum lycopersicum","50S ribosomal protein L9 (AHRD V3.3 *** A0A0B2PT62_GLYSO)","protein_coding"
"Solyc05g050930","No alias","Solanum lycopersicum","LOW QUALITY:DUF641 family protein (DUF641) (AHRD V3.3 *** AT3G60680.1)","protein_coding"
"Solyc05g056350","No alias","Solanum lycopersicum","Cleft lip and palate transmembrane protein, putative (AHRD V3.3 *** B9RW92_RICCO)","protein_coding"
"Solyc06g005200","No alias","Solanum lycopersicum","Ribonuclease P subunit p30 (AHRD V3.3 *-* A0A0B0MN27_GOSAR)","protein_coding"
"Solyc06g005980","No alias","Solanum lycopersicum","Anthranilate synthase (AHRD V3.3 *** A0A0K9NQE9_ZOSMR)","protein_coding"
"Solyc06g008010","No alias","Solanum lycopersicum","Mediator of RNA polymerase II transcription subunit 18 (AHRD V3.3 *** A0A0S2LKM0_REHGL)","protein_coding"
"Solyc06g008100","No alias","Solanum lycopersicum","Unknown protein (AHRD V3.3 )","protein_coding"
"Solyc06g008210","No alias","Solanum lycopersicum","breast cancer associated RING 1 (AHRD V3.3 *** AT1G04020.1)","protein_coding"
"Solyc06g008600","No alias","Solanum lycopersicum","E3 ubiquitin protein ligase DRIP2 (AHRD V3.3 *** W9RBR4_9ROSA)","protein_coding"
"Solyc06g011490","No alias","Solanum lycopersicum","Unknown protein (AHRD V3.3 )","protein_coding"
"Solyc06g030470","No alias","Solanum lycopersicum","Domain of Uncharacterized protein function, putative (AHRD V3.3 *** A0A061GWB6_THECC)","protein_coding"
"Solyc06g048460","No alias","Solanum lycopersicum","Anaphase-promoting complex subunit 1 (AHRD V3.3 *** W9RQW6_9ROSA)","protein_coding"
"Solyc06g051510","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc06g060290","No alias","Solanum lycopersicum","Protein disulfide-isomerase (AHRD V3.3 *** A0A0V0IRM2_SOLCH)","protein_coding"
"Solyc06g060550","No alias","Solanum lycopersicum","Cornichon family protein (AHRD V3.3 *** AT1G12390.1)","protein_coding"
"Solyc06g060680","No alias","Solanum lycopersicum","Kinase family protein (AHRD V3.3 *** B9GPM5_POPTR)","protein_coding"
"Solyc06g065580","No alias","Solanum lycopersicum","Uridine kinase (AHRD V3.3 *** K4C7I7_SOLLC)","protein_coding"
"Solyc06g066750","No alias","Solanum lycopersicum","thionin-like protein (AHRD V3.3 *** AT1G12663.1)","protein_coding"
"Solyc06g069790","No alias","Solanum lycopersicum","Gibberellin-regulated protein (AHRD V3.3 *** B4UW77_ARAHY)","protein_coding"
"Solyc06g071490","No alias","Solanum lycopersicum","Serine/threonine-protein kinase ATM (AHRD V3.3 *-* A0A0B0NJM8_GOSAR)","protein_coding"
"Solyc06g072310","No alias","Solanum lycopersicum","Homeobox-leucine zipper family protein (AHRD V3.3 *** B9N3B2_POPTR)","protein_coding"
"Solyc06g072660","No alias","Solanum lycopersicum","Protein DEK (AHRD V3.3 *** A0A0B2QBX5_GLYSO)","protein_coding"
"Solyc06g072770","No alias","Solanum lycopersicum","RNA-binding family protein isoform 1 (AHRD V3.3 *** A0A061G6K6_THECC)","protein_coding"
"Solyc06g074020","No alias","Solanum lycopersicum","LOW QUALITY:ovate family protein12","protein_coding"
"Solyc06g074690","No alias","Solanum lycopersicum","ARM repeat superfamily protein (AHRD V3.3 *** AT5G22820.3)","protein_coding"
"Solyc06g076660","No alias","Solanum lycopersicum","proliferating cell nuclear antigen","protein_coding"
"Solyc06g076940","No alias","Solanum lycopersicum","NudC domain-containing protein 2 (AHRD V3.3 *** A0A0B2PF32_GLYSO)","protein_coding"
"Solyc06g082500","No alias","Solanum lycopersicum","Nucleotide/sugar transporter family protein (AHRD V3.3 *** AT2G30460.2)","protein_coding"
"Solyc06g083710","No alias","Solanum lycopersicum","DENN domain-containing protein 5B (AHRD V3.3 *** A0A0B2PJ42_GLYSO)","protein_coding"
"Solyc07g005010","No alias","Solanum lycopersicum","Non-specific serine/threonine protein kinase (AHRD V3.3 *** A0A068USB4_COFCA)","protein_coding"
"Solyc07g005020","No alias","Solanum lycopersicum","DNA helicase (AHRD V3.3 *** K4CAX4_SOLLC)","protein_coding"
"Solyc07g007130","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc07g007670","No alias","Solanum lycopersicum","Purple acid phosphatase (AHRD V3.3 *** K4CBN7_SOLLC)","protein_coding"
"Solyc07g007690","No alias","Solanum lycopersicum","Chloride channel protein (AHRD V3.3 *** M1D0Y1_SOLTU)","protein_coding"
"Solyc07g007820","No alias","Solanum lycopersicum","ENTH/ANTH/VHS superfamily protein (AHRD V3.3 *** AT5G35200.2)","protein_coding"
"Solyc07g007860","No alias","Solanum lycopersicum","Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (AHRD V3.3 *-* AT2G10940.2)","protein_coding"
"Solyc07g016210","No alias","Solanum lycopersicum","Specific tissue protein (AHRD V3.3 *** G7IZL4_MEDTR)","protein_coding"
"Solyc07g018250","No alias","Solanum lycopersicum","LOW QUALITY:GNS1/SUR4 membrane protein family (AHRD V3.3 *** AT3G06470.1)","protein_coding"
"Solyc07g040740","No alias","Solanum lycopersicum","O-acyltransferase (AHRD V3.3 *** K4CDV1_SOLLC)","protein_coding"
"Solyc07g042980","No alias","Solanum lycopersicum","Regulator of chromosome condensation (RCC1) family protein (AHRD V3.3 *** AT5G60870.3)","protein_coding"
"Solyc07g044880","No alias","Solanum lycopersicum","Reticulon-like protein (AHRD V3.3 *** A0A0V0HSB2_SOLCH)","protein_coding"
"Solyc07g048070","No alias","Solanum lycopersicum","Auxin induced-like protein (AHRD V3.3 *** A0A0K9NX81_ZOSMR)","protein_coding"
"Solyc07g049370","No alias","Solanum lycopersicum","Glucan endo-1,3-beta-glucosidase, putative (AHRD V3.3 *** B9SH66_RICCO)","protein_coding"
"Solyc07g053930","No alias","Solanum lycopersicum","LOW QUALITY:pyrroline-5-carboxylate reductase (AHRD V3.3 *** AT4G03600.1)","protein_coding"
"Solyc07g053980","No alias","Solanum lycopersicum","Callose synthase-like protein (AHRD V3.3 *** G7JSU8_MEDTR)","protein_coding"
"Solyc07g055140","No alias","Solanum lycopersicum","DUF688 family protein (AHRD V3.3 *** G7JCM3_MEDTR)","protein_coding"
"Solyc07g056390","No alias","Solanum lycopersicum","Endoplasmic oxidoreductin-1, putative (AHRD V3.3 *** B9T812_RICCO)","protein_coding"
"Solyc07g061770","No alias","Solanum lycopersicum","Ankyrin repeat-containing-like protein (AHRD V3.3 *-* A0A061FUD1_THECC)","protein_coding"
"Solyc07g062820","No alias","Solanum lycopersicum","Pentatricopeptide repeat (PPR) superfamily protein (AHRD V3.3 *** AT4G18520.1)","protein_coding"
"Solyc07g065130","No alias","Solanum lycopersicum","Calcium-binding protein, putative (AHRD V3.3 *** B9T038_RICCO)","protein_coding"
"Solyc08g005430","No alias","Solanum lycopersicum","Growth-regulating factor (AHRD V3.3 *** A0A072TW62_MEDTR)","protein_coding"
"Solyc08g006270","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc08g006380","No alias","Solanum lycopersicum","Glycosyltransferase (AHRD V3.3 *** K4CIC2_SOLLC)","protein_coding"
"Solyc08g006700","No alias","Solanum lycopersicum","Enhancer of rudimentary homolog (AHRD V3.3 *** M1CHJ6_SOLTU)","protein_coding"
"Solyc08g007370","No alias","Solanum lycopersicum","RNA binding protein, putative (AHRD V3.3 *-* B9RNB1_RICCO)","protein_coding"
"Solyc08g008290","No alias","Solanum lycopersicum","UDP-Glycosyltransferase superfamily protein (AHRD V3.3 --* AT5G65685.2)","protein_coding"
"Solyc08g013880","No alias","Solanum lycopersicum","GPI-anchored protein (AHRD V3.3 *** AT2G30700.1)","protein_coding"
"Solyc08g014040","No alias","Solanum lycopersicum","Methyltransferase family protein (AHRD V3.3 *** G7KPC6_MEDTR)","protein_coding"
"Solyc08g061260","No alias","Solanum lycopersicum","G-protein coupled receptor 1 (AHRD V3.3 *** A0A097PPA8_SOLLC)","protein_coding"
"Solyc08g062820","No alias","Solanum lycopersicum","Cytokinin riboside 5'-monophosphate phosphoribohydrolase (AHRD V3.3 *** K4CL66_SOLLC)","protein_coding"
"Solyc08g066680","No alias","Solanum lycopersicum","Exostosin family protein (AHRD V3.3 *** AT5G25820.1)","protein_coding"
"Solyc08g067480","No alias","Solanum lycopersicum","V-type proton ATPase proteolipid subunit (AHRD V3.3 *** A0A1D1XX18_9ARAE)","protein_coding"
"Solyc08g067880","No alias","Solanum lycopersicum","Copper ion binding protein (AHRD V3.3 *** A0A0K9PL91_ZOSMR)","protein_coding"
"Solyc08g075190","No alias","Solanum lycopersicum","LOW QUALITY:C2 and GRAM domain-containing protein At1g03370 (AHRD V3.3 --* C2GR1_ARATH)","protein_coding"
"Solyc08g075920","No alias","Solanum lycopersicum","Protein BREVIS RADIX (AHRD V3.3 *** A0A0B2R5Q1_GLYSO)","protein_coding"
"Solyc08g076520","No alias","Solanum lycopersicum","Transmembrane protein, putative (AHRD V3.3 *** G7KCF0_MEDTR)","protein_coding"
"Solyc08g076870","No alias","Solanum lycopersicum","LOW QUALITY:DUF740 family protein (AHRD V3.3 *** G7KDT4_MEDTR)","protein_coding"
"Solyc08g077990","No alias","Solanum lycopersicum","Kinase like protein (AHRD V3.3 *-* Q0WPK0_ARATH)","protein_coding"
"Solyc08g078520","No alias","Solanum lycopersicum","electron transporter, putative (Protein of unknown function, DUF547) (AHRD V3.3 *** AT5G47380.4)","protein_coding"
"Solyc08g078750","No alias","Solanum lycopersicum","Leukocyte receptor cluster member 1 (AHRD V3.3 *** A0A0B0N472_GOSAR)","protein_coding"
"Solyc08g079050","No alias","Solanum lycopersicum","transcription factor (AHRD V3.3 *** AT4G22600.1)","protein_coding"
"Solyc08g079840","No alias","Solanum lycopersicum","subtilisin-like endoprotease","protein_coding"
"Solyc08g079850","No alias","Solanum lycopersicum","P69F P69D protein","protein_coding"
"Solyc08g080280","No alias","Solanum lycopersicum","FAM91 carboxy-terminus protein (AHRD V3.3 --* AT1G35220.6)","protein_coding"
"Solyc08g082200","No alias","Solanum lycopersicum","DNA primase (AHRD V3.3 *** K4CPL6_SOLLC)","protein_coding"
"Solyc08g082960","No alias","Solanum lycopersicum","HIT zinc finger protein (AHRD V3.3 *** A0A072VFL0_MEDTR)","protein_coding"
"Solyc09g005720","No alias","Solanum lycopersicum","60S ribosomal protein L23A (AHRD V3.3 *** A0A0B2RCV3_GLYSO)","protein_coding"
"Solyc09g007290","No alias","Solanum lycopersicum","Nuclear transcription factor Y subunit B (AHRD V3.3 *** G7L1Q2_MEDTR)","protein_coding"
"Solyc09g007330","No alias","Solanum lycopersicum","minichromosome maintenance 8 (AHRD V3.3 *** AT3G09660.3)","protein_coding"
"Solyc09g008970","No alias","Solanum lycopersicum","LOW QUALITY:AT3g10020/T22K18_16 (AHRD V3.3 *** Q9SR67_ARATH)","protein_coding"
"Solyc09g009260","No alias","Solanum lycopersicum","fructose-1,6-bisphosphate aldolase","protein_coding"
"Solyc09g009380","No alias","Solanum lycopersicum","Protein kinase (AHRD V3.3 *-* A0A0K9NMI8_ZOSMR)","protein_coding"
"Solyc09g010680","No alias","Solanum lycopersicum","Dof zinc finger protein (AHRD V3.3 *** W9S882_9ROSA)","protein_coding"
"Solyc09g011340","No alias","Solanum lycopersicum","reticulata-like protein, putative (DUF3411) (AHRD V3.3 *** AT2G37860.4)","protein_coding"
"Solyc09g011370","No alias","Solanum lycopersicum","F-box family protein (AHRD V3.3 *** B9IJF9_POPTR)","protein_coding"
"Solyc09g011580","No alias","Solanum lycopersicum","Glutathione S-transferase-like protein (AHRD V3.3 *** F8UX80_SOLHA)","protein_coding"
"Solyc09g011910","No alias","Solanum lycopersicum","DUF674 family protein (AHRD V3.3 *** G7JS94_MEDTR)","protein_coding"
"Solyc09g011980","No alias","Solanum lycopersicum","receptor lectin kinase (AHRD V3.3 *-* AT2G37710.1)","protein_coding"
"Solyc09g014860","No alias","Solanum lycopersicum","LURP-one-like protein (AHRD V3.3 *** G7KW19_MEDTR)","protein_coding"
"Solyc09g018670","No alias","Solanum lycopersicum","TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein (AHRD V3.3 *** AT4G10360.3)","protein_coding"
"Solyc09g042760","No alias","Solanum lycopersicum","Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *** AT5G48390.1)","protein_coding"
"Solyc09g062970","No alias","Solanum lycopersicum","GDSL-like Lipase/Acylhydrolase superfamily protein (AHRD V3.3 --* AT3G53100.1)","protein_coding"
"Solyc09g064720","No alias","Solanum lycopersicum","Endo-1,3-1,4-beta-d-glucanase, putative (AHRD V3.3 *** B9SFP3_RICCO)","protein_coding"
"Solyc09g065400","No alias","Solanum lycopersicum","Kelch repeat-containing F-box family protein (AHRD V3.3 *** B9GSL6_POPTR)","protein_coding"
"Solyc09g075360","No alias","Solanum lycopersicum","endo-1,4-beta-glucanase precursor","protein_coding"
"Solyc09g075450","No alias","Solanum lycopersicum","Fumarate hydratase (AHRD V3.3 *** G7IEJ2_MEDTR)","protein_coding"
"Solyc09g076050","No alias","Solanum lycopersicum","FRIGIDA-like protein (AHRD V3.3 *** AT3G22440.1)","protein_coding"
"Solyc09g082770","No alias","Solanum lycopersicum","Transmembrane emp24 domain-containing protein p24beta3 (AHRD V3.3 *** P24B3_ARATH)","protein_coding"
"Solyc09g089740","No alias","Solanum lycopersicum","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT1G06620.1)","protein_coding"
"Solyc09g090560","No alias","Solanum lycopersicum","Transmembrane protein, putative (AHRD V3.3 *** G7I6L6_MEDTR)","protein_coding"
"Solyc09g091650","No alias","Solanum lycopersicum","P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** AT1G04730.1)","protein_coding"
"Solyc09g092510","No alias","Solanum lycopersicum","Pyrroline-5-carboxylate reductase (AHRD V3.3 *-* A0A1D1ZGA1_9ARAE)","protein_coding"
"Solyc09g098360","No alias","Solanum lycopersicum","RNA polymerase II transcription mediator (AHRD V3.3 --* AT1G55325.4)","protein_coding"
"Solyc10g005280","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A118JXF7_CYNCS)","protein_coding"
"Solyc10g007400","No alias","Solanum lycopersicum","DNA polymerase delta subunit 3 (AHRD V3.3 *** A0A0B0NMF9_GOSAR)","protein_coding"
"Solyc10g008320","No alias","Solanum lycopersicum","LOW QUALITY:phosphatidic acid phosphatase 1 (AHRD V3.3 --* AT2G01180.6)","protein_coding"
"Solyc10g009330","No alias","Solanum lycopersicum","Arginine/serine-rich splicing factor, putative (AHRD V3.3 *** B9SBD0_RICCO)","protein_coding"
"Solyc10g011760","No alias","Solanum lycopersicum","Aldose 1-epimerase, putative (AHRD V3.3 *** B9RE17_RICCO)","protein_coding"
"Solyc10g011810","No alias","Solanum lycopersicum","Fatty acid/sphingolipid desaturase (AHRD V3.3 *-* AT2G46210.1)","protein_coding"
"Solyc10g012070","No alias","Solanum lycopersicum","Protein BPS1, chloroplastic (AHRD V3.3 *** A0A0B2RBR1_GLYSO)","protein_coding"
"Solyc10g044640","No alias","Solanum lycopersicum","magnesium transporter NIPA (DUF803) (AHRD V3.3 *** AT4G13800.8)","protein_coding"
"Solyc10g051390","No alias","Solanum lycopersicum","RNA-binding glycine-rich protein (AHRD V3.3 *** D6PZY6_TOBAC)","protein_coding"
"Solyc10g052750","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc10g076760","No alias","Solanum lycopersicum","Kinase family protein (AHRD V3.3 *** B9IG83_POPTR)","protein_coding"
"Solyc10g076810","No alias","Solanum lycopersicum","LOW QUALITY:Polynucleotidyl transferase, ribonuclease H-like superfamily protein (AHRD V3.3 -** AT2G36110.1)","protein_coding"
"Solyc10g077050","No alias","Solanum lycopersicum","S-acyltransferase (AHRD V3.3 *** K4D247_SOLLC)","protein_coding"
"Solyc10g078680","No alias","Solanum lycopersicum","C2 calcium/lipid-binding and GRAM domain protein (AHRD V3.3 *** A0A072TGP1_MEDTR)","protein_coding"
"Solyc10g078970","No alias","Solanum lycopersicum","LOW QUALITY:Zinc finger family protein (AHRD V3.3 *** B9HA00_POPTR)","protein_coding"
"Solyc10g079090","No alias","Solanum lycopersicum","Chaperone protein dnaJ, putative (AHRD V3.3 *** B9SL79_RICCO)","protein_coding"
"Solyc10g079500","No alias","Solanum lycopersicum","Inosine-5'-monophosphate dehydrogenase (AHRD V3.3 *** K4D2J1_SOLLC)","protein_coding"
"Solyc10g079510","No alias","Solanum lycopersicum","RAD3-like DNA-binding helicase protein (AHRD V3.3 *** AT1G20720.2)","protein_coding"
"Solyc10g079830","No alias","Solanum lycopersicum","7,8-dihydroneopterin aldolase (AHRD V3.3 *** A0A068UQN4_COFCA)","protein_coding"
"Solyc10g081260","No alias","Solanum lycopersicum","Protein DETOXIFICATION (AHRD V3.3 *** K4D313_SOLLC)","protein_coding"
"Solyc10g081730","No alias","Solanum lycopersicum","TPX2 (targeting protein for Xklp2) protein family (AHRD V3.3 *** AT2G35880.3)","protein_coding"
"Solyc10g083500","No alias","Solanum lycopersicum","Protein kinase family protein (AHRD V3.3 *-* Q9LZS4_ARATH)","protein_coding"
"Solyc10g083710","No alias","Solanum lycopersicum","3-deoxy-D-manno-octulosonic-acid transferase (AHRD V3.3 *** A0A151U3D0_CAJCA)","protein_coding"
"Solyc10g084880","No alias","Solanum lycopersicum","LOW QUALITY:Avr9/Cf-9 rapidly elicited protein 137 (AHRD V3.3 *** Q9FQZ2_TOBAC)","protein_coding"
"Solyc11g005150","No alias","Solanum lycopersicum","entensin X55687","protein_coding"
"Solyc11g005440","No alias","Solanum lycopersicum","Endonuclease or glycosyl hydrolase, putative isoform 1 (AHRD V3.3 *** A0A061DIG3_THECC)","protein_coding"
"Solyc11g005680","No alias","Solanum lycopersicum","Ribosomal protein S13 (AHRD V3.3 *** A0A103XPA4_CYNCS)","protein_coding"
"Solyc11g005690","No alias","Solanum lycopersicum","TONSOKU protein (AHRD V3.3 *** Q4W7J1_TOBAC)","protein_coding"
"Solyc11g005800","No alias","Solanum lycopersicum","Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** AT5G64630.2)","protein_coding"
"Solyc11g006200","No alias","Solanum lycopersicum","Homeodomain-like transcriptional regulator (AHRD V3.3 *** AT4G12750.1)","protein_coding"
"Solyc11g007310","No alias","Solanum lycopersicum","Suppressor of gene silencing 3, putative (AHRD V3.3 *** A0A061FQZ7_THECC)","protein_coding"
"Solyc11g008670","No alias","Solanum lycopersicum","Chromatin assembly factor 1, subunit A, putative (AHRD V3.3 *** B9RM13_RICCO)","protein_coding"
"Solyc11g008830","No alias","Solanum lycopersicum","Asymmetric leaves 2 (AHRD V3.3 *** A7L4B2_CARPA)","protein_coding"
"Solyc11g009060","No alias","Solanum lycopersicum","ATP synthase subunit B (AHRD V3.3 *** AT5G10320.5)","protein_coding"
"Solyc11g010690","No alias","Solanum lycopersicum","Nucleobase-ascorbate transporter-like protein (AHRD V3.3 *-* A0A072TRH3_MEDTR)","protein_coding"
"Solyc11g018620","No alias","Solanum lycopersicum","SNARE associated Golgi protein family (AHRD V3.3 *** AT4G09580.1)","protein_coding"
"Solyc11g018710","No alias","Solanum lycopersicum","LOW QUALITY:DUF688 family protein (AHRD V3.3 *** A0A072VNH4_MEDTR)","protein_coding"
"Solyc11g021260","No alias","Solanum lycopersicum","Ycf1 (AHRD V3.3 *-* A0A0U1ZG15_SOLCE)","protein_coding"
"Solyc11g030710","No alias","Solanum lycopersicum","UPF0301 protein (AHRD V3.3 *** A0A0B2QLB9_GLYSO)","protein_coding"
"Solyc11g045470","No alias","Solanum lycopersicum","zein-binding protein (Protein of unknown function%2C DUF593) (AHRD V3.3 *-* AT3G54740.8)","protein_coding"
"Solyc11g062260","No alias","Solanum lycopersicum","E3 ubiquitin ligase BIG brother-like protein (AHRD V3.3 *** G7JDP3_MEDTR)","protein_coding"
"Solyc11g064950","No alias","Solanum lycopersicum","BZIP transcription factor (AHRD V3.3 *** Q9SQK1_TOBAC)","protein_coding"
"Solyc11g065530","No alias","Solanum lycopersicum","alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** AT1G51440.1)","protein_coding"
"Solyc11g066330","No alias","Solanum lycopersicum","Major facilitator superfamily protein (AHRD V3.3 *** AT2G28120.1)","protein_coding"
"Solyc11g066770","No alias","Solanum lycopersicum","AP-2 complex subunit alpha (AHRD V3.3 *-* A0A151RV94_CAJCA)","protein_coding"
"Solyc11g066830","No alias","Solanum lycopersicum","Zinc finger transcription factor 68","protein_coding"
"Solyc11g067110","No alias","Solanum lycopersicum","DNA polymerase epsilon catalytic subunit (AHRD V3.3 *-* AT1G08260.2)","protein_coding"
"Solyc11g067130","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc11g068710","No alias","Solanum lycopersicum","F-box family protein (AHRD V3.3 *** B9MYU0_POPTR)","protein_coding"
"Solyc11g068950","No alias","Solanum lycopersicum","BEL1-related homeotic protein 11 (AHRD V3.3 *** Q8LLE3_SOLTU)","protein_coding"
"Solyc11g069070","No alias","Solanum lycopersicum","Heavy metal transport/detoxification superfamily protein (AHRD V3.3 *** AT2G36950.1)","protein_coding"
"Solyc11g069550","No alias","Solanum lycopersicum","lysine ketoglutarate reductase trans-splicing protein (DUF707) (AHRD V3.3 *** AT1G67850.7)","protein_coding"
"Solyc11g069730","No alias","Solanum lycopersicum","LOW QUALITY:SH2 domain protein A (AHRD V3.3 --* AT1G17040.3)","protein_coding"
"Solyc11g069910","No alias","Solanum lycopersicum","DNA-directed RNA polymerase II subunit RPB11-like protein (AHRD V3.3 *** A0A0B0P734_GOSAR)","protein_coding"
"Solyc11g072580","No alias","Solanum lycopersicum","Major facilitator superfamily protein (AHRD V3.3 *** AT3G45660.3)","protein_coding"
"Solyc12g009380","No alias","Solanum lycopersicum","Ribosomal protein S17 (AHRD V3.3 *** U5FIK1_POPTR)","protein_coding"
"Solyc12g010540","No alias","Solanum lycopersicum","UDP-glucuronate 4-epimerase 4 (AHRD V3.3 *** GAE4_ARATH)","protein_coding"
"Solyc12g019980","No alias","Solanum lycopersicum","Telomerase activating protein Est1 (AHRD V3.3 --* AT5G19400.5)","protein_coding"
"Solyc12g036140","No alias","Solanum lycopersicum","Multidrug resistance protein ABC transporter family protein (AHRD V3.3 *-* A0A072V4E0_MEDTR)","protein_coding"
"Solyc12g036490","No alias","Solanum lycopersicum","Phospholipase A1 (AHRD V3.3 *** A5YW95_CAPAN)","protein_coding"
"Solyc12g042770","No alias","Solanum lycopersicum","post-illumination chlorophyll fluorescence increase (AHRD V3.3 *** AT3G15840.1)","protein_coding"
"Solyc12g049580","No alias","Solanum lycopersicum","translation initiation factor eIF-2B subunit alpha (AHRD V3.3 *** AT1G53880.1)","protein_coding"
"Solyc12g056200","No alias","Solanum lycopersicum","transferring glycosyl group transferase (DUF604) (AHRD V3.3 *** AT4G11350.1)","protein_coding"
"Solyc12g089330","No alias","Solanum lycopersicum","Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *** AT1G20080.5)","protein_coding"
"Solyc12g094480","No alias","Solanum lycopersicum","Pantothenate synthetase (AHRD V3.3 *** A0A1D1ZM39_9ARAE)","protein_coding"
"Solyc12g094540","No alias","Solanum lycopersicum","LOW QUALITY:Werner Syndrome-like exonuclease (AHRD V3.3 *** W9SHV7_9ROSA)","protein_coding"
"Solyc12g095800","No alias","Solanum lycopersicum","DnaJ protein family-like (AHRD V3.3 *** Q7F1J8_ORYSJ)","protein_coding"
"Solyc12g098380","No alias","Solanum lycopersicum","zein-binding protein (Protein of unknown function, DUF593) (AHRD V3.3 *-* AT4G13630.2)","protein_coding"
"Solyc12g098400","No alias","Solanum lycopersicum","O-fucosyltransferase family protein (AHRD V3.3 *** AT1G76270.1)","protein_coding"
"Solyc12g098810","No alias","Solanum lycopersicum","Chitinase family protein (AHRD V3.3 *** AT1G05850.2)","protein_coding"
"Solyc12g099090","No alias","Solanum lycopersicum","evolutionarily conserved C-terminal region 2 (AHRD V3.3 *-* AT3G13460.4)","protein_coding"
"Solyc12g099660","No alias","Solanum lycopersicum","Glucosidase 2 subunit beta (AHRD V3.3 *** A0A0B2SD07_GLYSO)","protein_coding"
"Sopen03g033610","No alias","Solanum pennellii","Mis12 protein","protein_coding"
"Sopen05g026560","No alias","Solanum pennellii","Centromere/kinetochore Zw10","protein_coding"
"Sopen09g015810","No alias","Solanum pennellii","Meiosis protein SPO22/ZIP4 like","protein_coding"