"sequence_id","alias","species","description","type"
"101803","No alias","Selaginella moellendorffii ","homolog of RAD51 D","protein_coding"
"108734","No alias","Selaginella moellendorffii ","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"117801","No alias","Selaginella moellendorffii ","histidine kinase 3","protein_coding"
"121129","No alias","Selaginella moellendorffii ","glutathione synthetase 2","protein_coding"
"123932","No alias","Selaginella moellendorffii ","thiamin pyrophosphokinase1","protein_coding"
"126836","No alias","Selaginella moellendorffii ","Transmembrane amino acid transporter family protein","protein_coding"
"136248","No alias","Selaginella moellendorffii ","aldehyde dehydrogenase 5F1","protein_coding"
"137598","No alias","Selaginella moellendorffii ","calmodulin-binding protein","protein_coding"
"141330","No alias","Selaginella moellendorffii ","Clathrin adaptor complexes medium subunit family protein","protein_coding"
"15599","No alias","Selaginella moellendorffii ","calcium-dependent protein kinase 19","protein_coding"
"16635","No alias","Selaginella moellendorffii ","UDP-Glycosyltransferase superfamily protein","protein_coding"
"179372","No alias","Selaginella moellendorffii ","SPla/RYanodine receptor (SPRY) domain-containing protein","protein_coding"
"180600","No alias","Selaginella moellendorffii ","regulatory particle triple-A ATPase 3","protein_coding"
"18337","No alias","Selaginella moellendorffii ","cell division control 2","protein_coding"
"231534","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"231661","No alias","Selaginella moellendorffii ","tubulin beta chain 2","protein_coding"
"235152","No alias","Selaginella moellendorffii ","RNA polymerase Rpb7 N-terminal domain-containing protein","protein_coding"
"24195","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"268642","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"30531","No alias","Selaginella moellendorffii ","VPS54","protein_coding"
"3309","No alias","Selaginella moellendorffii ","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein","protein_coding"
"38123","No alias","Selaginella moellendorffii ","PLAC8 family protein","protein_coding"
"39369","No alias","Selaginella moellendorffii ","Plant protein of unknown function (DUF936)","protein_coding"
"402661","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"402699","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"402706","No alias","Selaginella moellendorffii ","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein","protein_coding"
"403061","No alias","Selaginella moellendorffii ","RNA-binding ASCH domain protein","protein_coding"
"403340","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"403691","No alias","Selaginella moellendorffii ","Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein","protein_coding"
"403771","No alias","Selaginella moellendorffii ","Chalcone and stilbene synthase family protein","protein_coding"
"404136","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"404580","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"404732","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"404961","No alias","Selaginella moellendorffii ","damaged DNA binding;exodeoxyribonuclease IIIs","protein_coding"
"404965","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"405303","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"406465","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"406640","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"406842","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"407240","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"409908","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"410323","No alias","Selaginella moellendorffii ","Mitochondrial substrate carrier family protein","protein_coding"
"410874","No alias","Selaginella moellendorffii ","GroES-like zinc-binding alcohol dehydrogenase family protein","protein_coding"
"411336","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"411576","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"412494","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"413427","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"416201","No alias","Selaginella moellendorffii ","Protein kinase superfamily protein","protein_coding"
"416338","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"416402","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"416938","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"417273","No alias","Selaginella moellendorffii ","radical SAM domain-containing protein / GCN5-related N-acetyltransferase (GNAT) family protein","protein_coding"
"417335","No alias","Selaginella moellendorffii ","histidinol dehydrogenase","protein_coding"
"417638","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"417909","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"418356","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"418581","No alias","Selaginella moellendorffii ","alpha/beta-Hydrolases superfamily protein","protein_coding"
"419106","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"419220","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"419407","No alias","Selaginella moellendorffii ","Serine carboxypeptidase S28 family protein","protein_coding"
"419750","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"420608","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"421161","No alias","Selaginella moellendorffii ","Transducin family protein / WD-40 repeat family protein","protein_coding"
"421328","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"421411","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"421620","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"421832","No alias","Selaginella moellendorffii ","Galactose oxidase/kelch repeat superfamily protein","protein_coding"
"421912","No alias","Selaginella moellendorffii ","cell division cycle 5","protein_coding"
"423093","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"424070","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"424595","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"425323","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"425332","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"425362","No alias","Selaginella moellendorffii ","glutathione synthetase 2","protein_coding"
"426724","No alias","Selaginella moellendorffii ","GDSL-like Lipase/Acylhydrolase superfamily protein","protein_coding"
"426981","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"427207","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"427260","No alias","Selaginella moellendorffii ","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"427361","No alias","Selaginella moellendorffii ","DNA topoisomerase, type IA, core","protein_coding"
"427525","No alias","Selaginella moellendorffii ","THUMP domain-containing protein","protein_coding"
"427535","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"428219","No alias","Selaginella moellendorffii ","lipase class 3 family protein","protein_coding"
"428769","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"429283","No alias","Selaginella moellendorffii ","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"429352","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"429412","No alias","Selaginella moellendorffii ","SET domain group 40","protein_coding"
"429772","No alias","Selaginella moellendorffii ","cytochrome P450, family 716, subfamily A, polypeptide 2","protein_coding"
"430642","No alias","Selaginella moellendorffii ","Galactose oxidase/kelch repeat superfamily protein","protein_coding"
"430936","No alias","Selaginella moellendorffii ","DNA/RNA helicase protein","protein_coding"
"431562","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"431931","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"432276","No alias","Selaginella moellendorffii ","chromatin remodeling factor CHD3 (PICKLE)","protein_coding"
"432424","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"437446","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"439163","No alias","Selaginella moellendorffii ","CLPC homologue 1","protein_coding"
"439227","No alias","Selaginella moellendorffii ","delta(3), delta(2)-enoyl CoA isomerase 1","protein_coding"
"440501","No alias","Selaginella moellendorffii ","SAUR-like auxin-responsive protein family","protein_coding"
"442708","No alias","Selaginella moellendorffii ","polyamine oxidase 1","protein_coding"
"448239","No alias","Selaginella moellendorffii ","histone deacetylase 14","protein_coding"
"48861","No alias","Selaginella moellendorffii ","NIFU-like protein 2","protein_coding"
"48869","No alias","Selaginella moellendorffii ","Expressed protein","protein_coding"
"57034","No alias","Selaginella moellendorffii ","Phosphoglycerate mutase family protein","protein_coding"
"57159","No alias","Selaginella moellendorffii ","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding"
"6228","No alias","Selaginella moellendorffii ","RNA cyclase family protein","protein_coding"
"65428","No alias","Selaginella moellendorffii ","GDSL-like Lipase/Acylhydrolase superfamily protein","protein_coding"
"72266","No alias","Selaginella moellendorffii ","pentatricopeptide (PPR) repeat-containing protein","protein_coding"
"72303","No alias","Selaginella moellendorffii ","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"73567","No alias","Selaginella moellendorffii ","Nucleotide-diphospho-sugar transferases superfamily protein","protein_coding"
"75347","No alias","Selaginella moellendorffii ","aldehyde dehydrogenase 11A3","protein_coding"
"77483","No alias","Selaginella moellendorffii ","polygalacturonase 2","protein_coding"
"78779","No alias","Selaginella moellendorffii ","wall-associated kinase, putative","protein_coding"
"78784","No alias","Selaginella moellendorffii ","Protein of unknown function (DUF1336)","protein_coding"
"81012","No alias","Selaginella moellendorffii ","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"82899","No alias","Selaginella moellendorffii ","cell division control 2","protein_coding"
"9116","No alias","Selaginella moellendorffii ","Heavy metal transport/detoxification superfamily protein","protein_coding"
"91529","No alias","Selaginella moellendorffii ","nine-cis-epoxycarotenoid dioxygenase 4","protein_coding"
"96586","No alias","Selaginella moellendorffii ","tRNA modification GTPase, putative","protein_coding"
"96946","No alias","Selaginella moellendorffii ","phosphoesterase","protein_coding"
"97195","No alias","Selaginella moellendorffii ","Gibberellin-regulated family protein","protein_coding"
"97475","No alias","Selaginella moellendorffii ","cell cycle checkpoint control protein family","protein_coding"
"97989","No alias","Selaginella moellendorffii ","Plant haem oxygenase (decyclizing) family protein","protein_coding"
"99379","No alias","Selaginella moellendorffii ","ARM repeat protein interacting with  ABF2","protein_coding"
"A4A49_03488","No alias","Nicotiana attenuata","hypothetical protein","protein_coding"
"A4A49_10438","No alias","Nicotiana attenuata","hypothetical protein","protein_coding"
"A4A49_23847","No alias","Nicotiana attenuata","hypothetical protein","protein_coding"
"AC206403.3_FG002","No alias","Zea mays","Function unknown","protein_coding"
"AC210013.4_FG010","No alias","Zea mays","Function unknown","protein_coding"
"AC216870.3_FG005","No alias","Zea mays","Function unknown","protein_coding"
"AC225718.2_FG005","No alias","Zea mays","homeobox protein 34","protein_coding"
"At1g01260","No alias","Arabidopsis thaliana","Transcription factor bHLH13 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNJ5]","protein_coding"
"At1g03320","No alias","Arabidopsis thaliana","F15K9.8 [Source:UniProtKB/TrEMBL;Acc:Q9ZVT3]","protein_coding"
"At1g04650","No alias","Arabidopsis thaliana","unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT1G04650]","protein_coding"
"At1g05950","No alias","Arabidopsis thaliana","unknown protein; Has 50 Blast hits to 45 proteins in 14 species: Archae - 5; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). [Source:TAIR;Acc:AT1G05950]","protein_coding"
"At1g08650","No alias","Arabidopsis thaliana","Phosphoenolpyruvate carboxylase kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SPK4]","protein_coding"
"At1g10710","No alias","Arabidopsis thaliana","Protein POOR HOMOLOGOUS SYNAPSIS 1 [Source:UniProtKB/Swiss-Prot;Acc:Q45GQ7]","protein_coding"
"At1g10890","No alias","Arabidopsis thaliana","unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: petal, flower, leaf; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expans /.../age; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13340.1); Has 11769 Blast hits to 8435 proteins in 698 species: Archae - 22; Bacteria - 971; Metazoa - 5937; Fungi - 1065; Plants - 592; Viruses - 101; Other Eukaryotes - 3081 (source: NCBI BLink). [Source:TAIR;Acc:AT1G10890]","protein_coding"
"At1g14000","No alias","Arabidopsis thaliana","At1g14000 [Source:UniProtKB/TrEMBL;Acc:Q9XI87]","protein_coding"
"At1g14100","No alias","Arabidopsis thaliana","Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8PVC8]","protein_coding"
"At1g14760","No alias","Arabidopsis thaliana","Protein KNATM [Source:UniProtKB/Swiss-Prot;Acc:F4HXU3]","protein_coding"
"At1g18560","No alias","Arabidopsis thaliana","BED zinc finger and hAT dimerization domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4ICA1]","protein_coding"
"At1g20100","No alias","Arabidopsis thaliana","DNA ligase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LNT6]","protein_coding"
"At1g20940","No alias","Arabidopsis thaliana","Putative F-box/kelch-repeat protein At1g20940 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYP3]","protein_coding"
"At1g24430","No alias","Arabidopsis thaliana","F21J9.9 [Source:UniProtKB/TrEMBL;Acc:Q9FYM0]","protein_coding"
"At1g28270","No alias","Arabidopsis thaliana","Protein RALF-like 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZA0]","protein_coding"
"At1g28430","No alias","Arabidopsis thaliana","Cytochrome P450 [Source:UniProtKB/TrEMBL;Acc:Q9SGP1]","protein_coding"
"At1g34410","No alias","Arabidopsis thaliana","Putative auxin response factor 21 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8N9]","protein_coding"
"At1g36000","No alias","Arabidopsis thaliana","LOB domain-containing protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8V8]","protein_coding"
"At1g50380","No alias","Arabidopsis thaliana","Prolyl oligopeptidase family protein [Source:TAIR;Acc:AT1G50380]","protein_coding"
"At1g50910","No alias","Arabidopsis thaliana","Uncharacterized protein At1g50910 [Source:UniProtKB/TrEMBL;Acc:Q56Y76]","protein_coding"
"At1g52530","No alias","Arabidopsis thaliana","Hus1 protein [Source:UniProtKB/TrEMBL;Acc:Q709F6]","protein_coding"
"At1g52920","No alias","Arabidopsis thaliana","LanC-like protein GCR2 [Source:UniProtKB/Swiss-Prot;Acc:F4IEM5]","protein_coding"
"At1g55870","No alias","Arabidopsis thaliana","Poly(A)-specific ribonuclease PARN [Source:UniProtKB/Swiss-Prot;Acc:Q9LG26]","protein_coding"
"At1g64260","No alias","Arabidopsis thaliana","MuDR family transposase [Source:UniProtKB/TrEMBL;Acc:Q9C7V1]","protein_coding"
"At1g65610","No alias","Arabidopsis thaliana","Endoglucanase 7 [Source:UniProtKB/Swiss-Prot;Acc:O04478]","protein_coding"
"At1g66640","No alias","Arabidopsis thaliana","RNI-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C6H1]","protein_coding"
"At1g66770","No alias","Arabidopsis thaliana","Bidirectional sugar transporter SWEET6 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9M9]","protein_coding"
"At1g67630","No alias","Arabidopsis thaliana","DNA polymerase alpha subunit B [Source:UniProtKB/TrEMBL;Acc:F4HTP2]","protein_coding"
"At1g69526","No alias","Arabidopsis thaliana","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I261]","protein_coding"
"At1g70770","No alias","Arabidopsis thaliana","AT1G70770 protein [Source:UniProtKB/TrEMBL;Acc:Q9S791]","protein_coding"
"At1g71430","No alias","Arabidopsis thaliana","At1g71430 [Source:UniProtKB/TrEMBL;Acc:Q9C9I0]","protein_coding"
"At1g72020","No alias","Arabidopsis thaliana","TonB-dependent heme receptor A [Source:UniProtKB/TrEMBL;Acc:Q9C7G5]","protein_coding"
"At1g72290","No alias","Arabidopsis thaliana","Cysteine protease inhibitor WSCP [Source:UniProtKB/Swiss-Prot;Acc:Q9C7S6]","protein_coding"
"At1g72370","No alias","Arabidopsis thaliana","40S ribosomal protein SA [Source:UniProtKB/TrEMBL;Acc:A0A178WNA1]","protein_coding"
"At1g73630","No alias","Arabidopsis thaliana","Probable calcium-binding protein CML26 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9U8]","protein_coding"
"At1g77310","No alias","Arabidopsis thaliana","BEST Arabidopsis thaliana protein match is: wound-responsive family protein (TAIR:AT1G21610.1); Has 493 Blast hits to 482 proteins in 163 species: Archae - 0; Bacteria - 100; Metazoa - 172; Fungi - 66; Plants - 65; Viruses - 7; Other Eukaryotes - 83 /.../ce: NCBI BLink). [Source:TAIR;Acc:AT1G77310]","protein_coding"
"At1g77610","No alias","Arabidopsis thaliana","UDP-galactose transporter 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C521]","protein_coding"
"At1g77960","No alias","Arabidopsis thaliana","Repressor ROX1-like protein [Source:UniProtKB/TrEMBL;Acc:Q5BPU6]","protein_coding"
"At2g04750","No alias","Arabidopsis thaliana","Fimbrin-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ84]","protein_coding"
"At2g18590","No alias","Arabidopsis thaliana","Major facilitator superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IQK9]","protein_coding"
"At2g18650","No alias","Arabidopsis thaliana","Putative RING-H2 finger protein ATL49 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZV53]","protein_coding"
"At2g18980","No alias","Arabidopsis thaliana","Peroxidase 16 [Source:UniProtKB/Swiss-Prot;Acc:Q96518]","protein_coding"
"At2g19290","No alias","Arabidopsis thaliana","Uncharacterized protein At2g19290 [Source:UniProtKB/TrEMBL;Acc:O64562]","protein_coding"
"At2g19810","No alias","Arabidopsis thaliana","TZF2 [Source:UniProtKB/TrEMBL;Acc:A0A178VX61]","protein_coding"
"At2g22900","No alias","Arabidopsis thaliana","Putative glycosyltransferase 7 [Source:UniProtKB/Swiss-Prot;Acc:O81007]","protein_coding"
"At2g24080","No alias","Arabidopsis thaliana","F-box protein (DUF295) [Source:UniProtKB/TrEMBL;Acc:O82236]","protein_coding"
"At2g24240","No alias","Arabidopsis thaliana","BTB/POZ domain-containing protein At2g24240 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUH1]","protein_coding"
"At2g26660","No alias","Arabidopsis thaliana","SPX domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O48781]","protein_coding"
"At2g26730","No alias","Arabidopsis thaliana","Probable inactive receptor kinase At2g26730 [Source:UniProtKB/Swiss-Prot;Acc:O48788]","protein_coding"
"At2g26940","No alias","Arabidopsis thaliana","C2H2-type zinc finger family protein [Source:UniProtKB/TrEMBL;Acc:O81013]","protein_coding"
"At2g27750","No alias","Arabidopsis thaliana","Nucleolar matrix protein-related [Source:UniProtKB/TrEMBL;Acc:Q9ZUX6]","protein_coding"
"At2g28360","No alias","Arabidopsis thaliana","SIT4 phosphatase-associated family protein [Source:UniProtKB/TrEMBL;Acc:F4IIN7]","protein_coding"
"At2g36070","No alias","Arabidopsis thaliana","Mitochondrial import inner membrane translocase subunit TIM44-2 [Source:UniProtKB/Swiss-Prot;Acc:Q5XF06]","protein_coding"
"At2g37860","No alias","Arabidopsis thaliana","Protein RETICULATA, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:B9DFK5]","protein_coding"
"At2g40370","No alias","Arabidopsis thaliana","Laccase-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIY8]","protein_coding"
"At2g41970","No alias","Arabidopsis thaliana","Probable protein kinase At2g41970 [Source:UniProtKB/Swiss-Prot;Acc:P93749]","protein_coding"
"At2g42430","No alias","Arabidopsis thaliana","LOB domain-containing protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLB7]","protein_coding"
"At2g43260","No alias","Arabidopsis thaliana","F-box and associated interaction domains-containing protein [Source:TAIR;Acc:AT2G43260]","protein_coding"
"At2g43270","No alias","Arabidopsis thaliana","F-box and associated interaction domains-containing protein [Source:UniProtKB/TrEMBL;Acc:F4IR26]","protein_coding"
"At2g45420","No alias","Arabidopsis thaliana","LBD18 [Source:UniProtKB/TrEMBL;Acc:A0A178VVX7]","protein_coding"
"At2g45570","No alias","Arabidopsis thaliana","Cytochrome P450 76C2 [Source:UniProtKB/Swiss-Prot;Acc:O64637]","protein_coding"
"At2g46960","No alias","Arabidopsis thaliana","Cytochrome P450 709B1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASR3]","protein_coding"
"At2g47260","No alias","Arabidopsis thaliana","Probable WRKY transcription factor 23 [Source:UniProtKB/Swiss-Prot;Acc:O22900]","protein_coding"
"At3g03440","No alias","Arabidopsis thaliana","ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J139]","protein_coding"
"At3g04830","No alias","Arabidopsis thaliana","Contains similarity to O-linked GlcNAc transferases [Source:UniProtKB/TrEMBL;Acc:Q9CAU9]","protein_coding"
"At3g05480","No alias","Arabidopsis thaliana","Cell cycle checkpoint control protein family [Source:UniProtKB/TrEMBL;Acc:F4J7B7]","protein_coding"
"At3g05690","No alias","Arabidopsis thaliana","Nuclear factor Y, subunit A2 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSX7]","protein_coding"
"At3g07450","No alias","Arabidopsis thaliana","Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SRS1]","protein_coding"
"At3g07900","No alias","Arabidopsis thaliana","O-fucosyltransferase 24 [Source:UniProtKB/Swiss-Prot;Acc:Q9SFC4]","protein_coding"
"At3g09370","No alias","Arabidopsis thaliana","Myb domain protein 3r-3 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSC6]","protein_coding"
"At3g09620","No alias","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRR1]","protein_coding"
"At3g12690","No alias","Arabidopsis thaliana","Serine/threonine-protein kinase AGC1-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTW5]","protein_coding"
"At3g13060","No alias","Arabidopsis thaliana","Evolutionarily conserved C-terminal region 5 [Source:UniProtKB/TrEMBL;Acc:Q0WR25]","protein_coding"
"At3g13310","No alias","Arabidopsis thaliana","At3g13310 [Source:UniProtKB/TrEMBL;Acc:Q9LTT7]","protein_coding"
"At3g13445","No alias","Arabidopsis thaliana","TATA-box-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P28147]","protein_coding"
"At3g15300","No alias","Arabidopsis thaliana","VQ motif-containing protein 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDZ1]","protein_coding"
"At3g15357","No alias","Arabidopsis thaliana","At3g15357 [Source:UniProtKB/TrEMBL;Acc:Q8LDR8]","protein_coding"
"At3g16160","No alias","Arabidopsis thaliana","Protein tesmin/TSO1-like CXC 8 [Source:UniProtKB/Swiss-Prot;Acc:Q700D0]","protein_coding"
"At3g18060","No alias","Arabidopsis thaliana","Actin-interacting protein 1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LV35]","protein_coding"
"At3g18165","No alias","Arabidopsis thaliana","Pre-mRNA-splicing factor SPF27 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q949S9]","protein_coding"
"At3g20050","No alias","Arabidopsis thaliana","T-complex protein 1 subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P28769]","protein_coding"
"At3g22640","No alias","Arabidopsis thaliana","Vicilin-like seed storage protein At3g22640 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUJ7]","protein_coding"
"At3g22970","No alias","Arabidopsis thaliana","At3g22970 [Source:UniProtKB/TrEMBL;Acc:Q9LIJ8]","protein_coding"
"At3g24830","No alias","Arabidopsis thaliana","60S ribosomal protein L13a-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRX8]","protein_coding"
"At3g26410","No alias","Arabidopsis thaliana","tRNA modification 11 protein [Source:UniProtKB/TrEMBL;Acc:Q9LIN4]","protein_coding"
"At3g26940","No alias","Arabidopsis thaliana","CDG1 [Source:UniProtKB/TrEMBL;Acc:A0A178VIM3]","protein_coding"
"At3g28840","No alias","Arabidopsis thaliana","At3g28840 [Source:UniProtKB/TrEMBL;Acc:Q058M7]","protein_coding"
"At3g49470","No alias","Arabidopsis thaliana","Nascent polypeptide-associated complex subunit alpha-like protein 2 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LR04]","protein_coding"
"At3g50430","No alias","Arabidopsis thaliana","Golgin [Source:UniProtKB/TrEMBL;Acc:Q84TJ4]","protein_coding"
"At3g51750","No alias","Arabidopsis thaliana","Uncharacterized protein At3g51750 [Source:UniProtKB/TrEMBL;Acc:Q9SCT3]","protein_coding"
"At3g52190","No alias","Arabidopsis thaliana","SEC12-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYE0]","protein_coding"
"At3g52710","No alias","Arabidopsis thaliana","Uncharacterized protein At3g52710 [Source:UniProtKB/TrEMBL;Acc:Q9LXJ3]","protein_coding"
"At3g53940","No alias","Arabidopsis thaliana","Mitochondrial substrate carrier family protein [Source:UniProtKB/TrEMBL;Acc:Q8W4M2]","protein_coding"
"At3g57440","No alias","Arabidopsis thaliana","Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q6DYC0]","protein_coding"
"At3g59300","No alias","Arabidopsis thaliana","Pentatricopeptide repeat (PPR) superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LM77]","protein_coding"
"At3g61950","No alias","Arabidopsis thaliana","Transcription factor bHLH67 [Source:UniProtKB/Swiss-Prot;Acc:Q700E4]","protein_coding"
"At3g62090","No alias","Arabidopsis thaliana","PIL2 [Source:UniProtKB/TrEMBL;Acc:A0A178VFI3]","protein_coding"
"At3g62270","No alias","Arabidopsis thaliana","Probable boron transporter 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1P7]","protein_coding"
"At4g00910","No alias","Arabidopsis thaliana","Aluminium activated malate transporter family protein [Source:TAIR;Acc:AT4G00910]","protein_coding"
"At4g02270","No alias","Arabidopsis thaliana","At4g02270 [Source:UniProtKB/TrEMBL;Acc:O81417]","protein_coding"
"At4g04650","No alias","Arabidopsis thaliana","AT4g04650 protein [Source:UniProtKB/TrEMBL;Acc:Q9S9V5]","protein_coding"
"At4g08270","No alias","Arabidopsis thaliana","Glutathione S-transferase T3-like protein [Source:UniProtKB/TrEMBL;Acc:Q9SUF3]","protein_coding"
"At4g09510","No alias","Arabidopsis thaliana","Alkaline/neutral invertase CINV2 [Source:UniProtKB/Swiss-Prot;Acc:Q67XD9]","protein_coding"
"At4g11440","No alias","Arabidopsis thaliana","Mitochondrial substrate carrier family protein [Source:UniProtKB/TrEMBL;Acc:F4JP07]","protein_coding"
"At4g11760","No alias","Arabidopsis thaliana","Defensin-like protein 151 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0E3]","protein_coding"
"At4g15410","No alias","Arabidopsis thaliana","Plant UBX domain-containing protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q7Y175]","protein_coding"
"At4g16120","No alias","Arabidopsis thaliana","COBRA-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZ17]","protein_coding"
"At4g17760","No alias","Arabidopsis thaliana","At4g17760 [Source:UniProtKB/TrEMBL;Acc:Q8L7G8]","protein_coding"
"At4g18980","No alias","Arabidopsis thaliana","AtS40-3 [Source:UniProtKB/TrEMBL;Acc:A0A178UY13]","protein_coding"
"At4g22590","No alias","Arabidopsis thaliana","Trehalose 6-phosphate phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178UWC3]","protein_coding"
"At4g22620","No alias","Arabidopsis thaliana","Auxin-responsive family protein [Source:UniProtKB/TrEMBL;Acc:O49643]","protein_coding"
"At4g26730","No alias","Arabidopsis thaliana","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SZ14]","protein_coding"
"At4g27420","No alias","Arabidopsis thaliana","ABCG9 [Source:UniProtKB/TrEMBL;Acc:A0A178V178]","protein_coding"
"At4g29180","No alias","Arabidopsis thaliana","RHS16 [Source:UniProtKB/TrEMBL;Acc:A0A178V2M3]","protein_coding"
"At4g31600","No alias","Arabidopsis thaliana","UDP-galactose/UDP-glucose transporter 7 [Source:UniProtKB/Swiss-Prot;Acc:Q94B65]","protein_coding"
"At5g01080","No alias","Arabidopsis thaliana","Beta-galactosidase related protein [Source:UniProtKB/TrEMBL;Acc:F4K7X9]","protein_coding"
"At5g03740","No alias","Arabidopsis thaliana","HDT3 [Source:UniProtKB/TrEMBL;Acc:A0A178UP12]","protein_coding"
"At5g05160","No alias","Arabidopsis thaliana","Probable leucine-rich repeat receptor-like protein kinase At5g05160 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHK7]","protein_coding"
"At5g06810","No alias","Arabidopsis thaliana","Mitochondrial transcription termination factor family protein [Source:TAIR;Acc:AT5G06810]","protein_coding"
"At5g06820","No alias","Arabidopsis thaliana","Protein STRUBBELIG-RECEPTOR FAMILY 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG24]","protein_coding"
"At5g06940","No alias","Arabidopsis thaliana","Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 [Source:UniProtKB/Swiss-Prot;Acc:Q9FL51]","protein_coding"
"At5g07700","No alias","Arabidopsis thaliana","MYB76 [Source:UniProtKB/TrEMBL;Acc:A0A178UB51]","protein_coding"
"At5g07930","No alias","Arabidopsis thaliana","MEI2 C-terminal RRM only like 2 [Source:UniProtKB/TrEMBL;Acc:F4K9I2]","protein_coding"
"At5g13480","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein [Source:TAIR;Acc:AT5G13480]","protein_coding"
"At5g14600","No alias","Arabidopsis thaliana","tRNA (adenine(58)-N(1))-methyltransferase [Source:UniProtKB/TrEMBL;Acc:Q84K50]","protein_coding"
"At5g15000","No alias","Arabidopsis thaliana","ECA1 gametogenesis family protein [Source:UniProtKB/TrEMBL;Acc:F4K8A7]","protein_coding"
"At5g18550","No alias","Arabidopsis thaliana","Zinc finger CCCH domain-containing protein 58 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPN3]","protein_coding"
"At5g18560","No alias","Arabidopsis thaliana","PUCHI [Source:UniProtKB/TrEMBL;Acc:A0A178URC3]","protein_coding"
"At5g20450","No alias","Arabidopsis thaliana","CONTAINS InterPro DOMAIN/s: Dilute (InterPro:IPR002710); BEST Arabidopsis thaliana protein match is: Myosin family protein with Dil domain (TAIR:AT5G20490.2); Has 1723 Blast hits to 1458 proteins in 355 species: Archae - 28; Bacteria - 353; Metazoa  /.../ Fungi - 121; Plants - 353; Viruses - 3; Other Eukaryotes - 412 (source: NCBI BLink). [Source:TAIR;Acc:AT5G20450]","protein_coding"
"At5g24560","No alias","Arabidopsis thaliana","phloem protein 2-B12 [Source:TAIR;Acc:AT5G24560]","protein_coding"
"At5g26180","No alias","Arabidopsis thaliana","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8GYE8]","protein_coding"
"At5g27490","No alias","Arabidopsis thaliana","Protein YIPF [Source:UniProtKB/TrEMBL;Acc:F4K4B8]","protein_coding"
"At5g28610","No alias","Arabidopsis thaliana","LOW protein: ATP-dependent RNA helicase DRS1-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LKU5]","protein_coding"
"At5g37050","No alias","Arabidopsis thaliana","FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: sorting nexin 2A (TAIR:AT5G58440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archa /.../; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT5G37050]","protein_coding"
"At5g39850","No alias","Arabidopsis thaliana","40S ribosomal protein S9-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLF0]","protein_coding"
"At5g41620","No alias","Arabidopsis thaliana","Uncharacterized protein At5g41620 [Source:UniProtKB/Swiss-Prot;Acc:Q66GQ2]","protein_coding"
"At5g42330","No alias","Arabidopsis thaliana","At5g42330 [Source:UniProtKB/TrEMBL;Acc:Q6GKX1]","protein_coding"
"At5g43080","No alias","Arabidopsis thaliana","Putative cyclin-A3-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMH5]","protein_coding"
"At5g43230","No alias","Arabidopsis thaliana","unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01810.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eu /.../es - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT5G43230]","protein_coding"
"At5g44780","No alias","Arabidopsis thaliana","Multiple organellar RNA editing factor 4, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O48582]","protein_coding"
"At5g44920","No alias","Arabidopsis thaliana","TIR domain-containing protein [Source:UniProtKB/Swiss-Prot;Acc:Q0WSX8]","protein_coding"
"At5g50010","No alias","Arabidopsis thaliana","Transcription factor bHLH145 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGB0]","protein_coding"
"At5g50590","No alias","Arabidopsis thaliana","11-beta-hydroxysteroid dehydrogenase-like 4A [Source:UniProtKB/Swiss-Prot;Acc:P0DKC7]","protein_coding"
"At5g51280","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 35 [Source:UniProtKB/Swiss-Prot;Acc:Q9LU46]","protein_coding"
"At5g55070","No alias","Arabidopsis thaliana","Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FLQ4]","protein_coding"
"At5g57970","No alias","Arabidopsis thaliana","At5g57970 [Source:UniProtKB/TrEMBL;Acc:Q9FJL9]","protein_coding"
"At5g60670","No alias","Arabidopsis thaliana","60S ribosomal protein L12-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FF52]","protein_coding"
"At5g60730","No alias","Arabidopsis thaliana","Anion-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:Q5XF80]","protein_coding"
"At5g62040","No alias","Arabidopsis thaliana","Protein BROTHER of FT and TFL 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIT4]","protein_coding"
"At5g62230","No alias","Arabidopsis thaliana","LRR receptor-like serine/threonine-protein kinase ERL1 [Source:UniProtKB/Swiss-Prot;Acc:C0LGW6]","protein_coding"
"At5g62500","No alias","Arabidopsis thaliana","Microtubule-associated protein RP/EB family member 1B [Source:UniProtKB/Swiss-Prot;Acc:Q9FJJ5]","protein_coding"
"At5g63560","No alias","Arabidopsis thaliana","Fatty alcohol:caffeoyl-CoA acyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9FFQ7]","protein_coding"
"Bradi1g02505","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g04450","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g06766","No alias","Brachypodium distachyon","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Bradi1g12851","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g45220","No alias","Brachypodium distachyon","TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14","protein_coding"
"Bradi1g47017","No alias","Brachypodium distachyon","O-methyltransferase family protein","protein_coding"
"Bradi1g50020","No alias","Brachypodium distachyon","damaged DNA binding;exodeoxyribonuclease IIIs","protein_coding"
"Bradi1g62600","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi1g62700","No alias","Brachypodium distachyon","cell cycle checkpoint control protein family","protein_coding"
"Bradi1g69290","No alias","Brachypodium distachyon","Protein kinase superfamily protein","protein_coding"
"Bradi1g71240","No alias","Brachypodium distachyon","Protein of unknown function (DUF677)","protein_coding"
"Bradi1g74135","No alias","Brachypodium distachyon","Protein of unknown function, DUF593","protein_coding"
"Bradi1g78821","No alias","Brachypodium distachyon","Leucine-rich repeat protein kinase family protein","protein_coding"
"Bradi2g04040","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi2g11646","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi2g23341","No alias","Brachypodium distachyon","myb domain protein 3r-5","protein_coding"
"Bradi2g25250","No alias","Brachypodium distachyon","Thioredoxin superfamily protein","protein_coding"
"Bradi2g27440","No alias","Brachypodium distachyon","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"Bradi2g37140","No alias","Brachypodium distachyon","embryo defective 2735","protein_coding"
"Bradi2g38490","No alias","Brachypodium distachyon","AMP-dependent synthetase and ligase family protein","protein_coding"
"Bradi2g40000","No alias","Brachypodium distachyon","Zinc finger (C3HC4-type RING finger) family protein","protein_coding"
"Bradi2g40670","No alias","Brachypodium distachyon","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"Bradi2g42250","No alias","Brachypodium distachyon","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Bradi2g44870","No alias","Brachypodium distachyon","beta carbonic anhydrase 4","protein_coding"
"Bradi2g50160","No alias","Brachypodium distachyon","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"Bradi2g54704","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi2g56090","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi2g58475","No alias","Brachypodium distachyon","RNA-binding (RRM/RBD/RNP motifs) family protein","protein_coding"
"Bradi2g62320","No alias","Brachypodium distachyon","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"Bradi3g14390","No alias","Brachypodium distachyon","cytochrome P450, family 703, subfamily A, polypeptide 2","protein_coding"
"Bradi3g16980","No alias","Brachypodium distachyon","XH/XS domain-containing protein","protein_coding"
"Bradi3g18765","No alias","Brachypodium distachyon","zinc ion binding;transcription regulators","protein_coding"
"Bradi3g19760","No alias","Brachypodium distachyon","purple acid phosphatase 23","protein_coding"
"Bradi3g34295","No alias","Brachypodium distachyon","Plant protein of unknown function (DUF827)","protein_coding"
"Bradi3g38714","No alias","Brachypodium distachyon","F-box and associated interaction domains-containing protein","protein_coding"
"Bradi3g47510","No alias","Brachypodium distachyon","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Bradi3g53120","No alias","Brachypodium distachyon","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Bradi3g53290","No alias","Brachypodium distachyon","Phosphoribosyltransferase family protein","protein_coding"
"Bradi3g53710","No alias","Brachypodium distachyon","eukaryotic translation initiation factor 3G1","protein_coding"
"Bradi3g54380","No alias","Brachypodium distachyon","Calcium-binding EF-hand family protein","protein_coding"
"Bradi3g55220","No alias","Brachypodium distachyon","GroES-like zinc-binding dehydrogenase family protein","protein_coding"
"Bradi4g02767","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi4g06691","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi4g10453","No alias","Brachypodium distachyon","NB-ARC domain-containing disease resistance protein","protein_coding"
"Bradi4g20710","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi4g26380","No alias","Brachypodium distachyon","zinc induced facilitator-like 1","protein_coding"
"Bradi4g26510","No alias","Brachypodium distachyon","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"Bradi4g33060","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi4g37627","No alias","Brachypodium distachyon","trithorax-like protein 2","protein_coding"
"Bradi5g02740","No alias","Brachypodium distachyon","pentatricopeptide (PPR) repeat-containing protein","protein_coding"
"Bradi5g05210","No alias","Brachypodium distachyon","Methyltransferase family protein","protein_coding"
"Bradi5g08500","No alias","Brachypodium distachyon","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"Bradi5g09066","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi5g10610","No alias","Brachypodium distachyon","PDI-like 1-2","protein_coding"
"Bradi5g12610","No alias","Brachypodium distachyon","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"Bradi5g16410","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi5g18920","No alias","Brachypodium distachyon","cytochrome P450, family 704, subfamily A, polypeptide 2","protein_coding"
"Bradi5g19410","No alias","Brachypodium distachyon","Protein phosphatase 2C family protein","protein_coding"
"Bradi5g26560","No alias","Brachypodium distachyon","nudix hydrolase homolog 26","protein_coding"
"Brara.A00574.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A01137.1","No alias","Brassica rapa","miRNA/siRNA methyltransferase *(HEN1)","protein_coding"
"Brara.A01531.1","No alias","Brassica rapa","plastidial RNA splicing factor *(OTP70)","protein_coding"
"Brara.A01959.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A02407.1","No alias","Brassica rapa","E-class RAB GTPase","protein_coding"
"Brara.A03603.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A03800.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B01356.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B01941.1","No alias","Brassica rapa","HD-ZIP I/II-type transcription factor","protein_coding"
"Brara.B02191.1","No alias","Brassica rapa","gamete interaction factor *(EC1) & EC1 precursor polypeptide","protein_coding"
"Brara.B02320.1","No alias","Brassica rapa","E3 ubiquitin ligase *(DA2)","protein_coding"
"Brara.C01299.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C01361.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C03386.1","No alias","Brassica rapa","Qa-type SYP1-group component of SNARE membrane fusion complex","protein_coding"
"Brara.C03821.1","No alias","Brassica rapa","subunit epsilon of ATP synthase peripheral MF1 subcomplex","protein_coding"
"Brara.D00601.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.D02526.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.D02708.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E00869.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E00897.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E01520.1","No alias","Brassica rapa","Trihelix-type transcription factor","protein_coding"
"Brara.E01574.1","No alias","Brassica rapa","component *(HUS1) of 9-1-1 DNA damage sensor complex","protein_coding"
"Brara.E01814.1","No alias","Brassica rapa","component *(CA) of NADH dehydrogenase carbonic anhydrase module & component *(CAL) of NADH dehydrogenase carbonic anhydrase module","protein_coding"
"Brara.E02247.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E02504.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E02528.1","No alias","Brassica rapa","regulatory protein *(MTV1) of vesicle trafficking","protein_coding"
"Brara.E03363.1","No alias","Brassica rapa","component *(RAD9) of 9-1-1 DNA damage sensor complex","protein_coding"
"Brara.E03524.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F00490.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F00738.1","No alias","Brassica rapa","cohesin cofactor *(WAPL)","protein_coding"
"Brara.F02200.1","No alias","Brassica rapa","transcription factor *(DOF)","protein_coding"
"Brara.F03267.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G00493.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G00585.1","No alias","Brassica rapa","methylation reader component *(ING1)","protein_coding"
"Brara.G00886.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G01124.1","No alias","Brassica rapa","Kinesin-6-type motor protein","protein_coding"
"Brara.G02993.1","No alias","Brassica rapa","class-B endo-1,4-beta-glucanase","protein_coding"
"Brara.H01299.1","No alias","Brassica rapa","FRS/FRF-type transcription factor","protein_coding"
"Brara.H01907.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H02646.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H03008.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I01622.1","No alias","Brassica rapa","component *(p24-delta) of GPI-anchor protein cargo receptor complex","protein_coding"
"Brara.I03144.1","No alias","Brassica rapa","alpha-class expansin","protein_coding"
"Brara.I03530.1","No alias","Brassica rapa","SMARCI component *(BRD) of SWI/SNF chromatin remodeling complex","protein_coding"
"Brara.I03556.1","No alias","Brassica rapa","E3 ubiquitin ligase","protein_coding"
"Brara.I04039.1","No alias","Brassica rapa","Trihelix-type transcription factor","protein_coding"
"Brara.I04236.1","No alias","Brassica rapa","E3 ubiquitin ligase *(BRH)","protein_coding"
"Brara.I05622.1","No alias","Brassica rapa","Spliceophilin-type pre-mRNA splicing factor *(CYP18-1) & EC_5.2 cis-trans-isomerase","protein_coding"
"Brara.J00007.1","No alias","Brassica rapa","SBP-type transcription factor","protein_coding"
"Brara.J00796.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J01361.1","No alias","Brassica rapa","mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP trafficking complex","protein_coding"
"Brara.J01697.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J02169.1","No alias","Brassica rapa","subunit beta of RAB-GTPase geranylgeranyltransferase (RGT) complex","protein_coding"
"Brara.J02845.1","No alias","Brassica rapa","component *(Pam18) of inner mitochondrion membrane TIM translocation system","protein_coding"
"Brara.K00004.1","No alias","Brassica rapa","broad substrate-specificity aminopeptidase *(MPA1)","protein_coding"
"Brara.K00490.1","No alias","Brassica rapa","component *(RAD1-LIKE) of 9-1-1 DNA damage sensor complex","protein_coding"
"Brara.K00492.1","No alias","Brassica rapa","Qa-type SYP2-group component of SNARE membrane fusion complex","protein_coding"
"Brara.K00677.1","No alias","Brassica rapa","component *(NBA1) of BRCC regulatory deubiquination complex","protein_coding"
"Brara.K00795.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Cre01.g009731","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre01.g034650","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre01.g035800","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre01.g043300","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre01.g055966","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g082000","No alias","Chlamydomonas reinhardtii","HhH-GPD base excision DNA repair family protein","protein_coding"
"Cre02.g086100","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g089050","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g089311","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g089850","No alias","Chlamydomonas reinhardtii","high mobility group","protein_coding"
"Cre02.g095066","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g096050","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g096150","No alias","Chlamydomonas reinhardtii","manganese superoxide dismutase 1","protein_coding"
"Cre02.g117250","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g144005","No alias","Chlamydomonas reinhardtii","GDSL-like Lipase/Acylhydrolase superfamily protein","protein_coding"
"Cre03.g145607","No alias","Chlamydomonas reinhardtii","Transport protein particle (TRAPP) component","protein_coding"
"Cre03.g146687","No alias","Chlamydomonas reinhardtii","AMMECR1 family","protein_coding"
"Cre03.g154651","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g157650","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g162250","No alias","Chlamydomonas reinhardtii","damaged DNA binding;exodeoxyribonuclease IIIs","protein_coding"
"Cre03.g172500","No alias","Chlamydomonas reinhardtii","Alternative oxidase family protein","protein_coding"
"Cre03.g183700","No alias","Chlamydomonas reinhardtii","glucan synthase-like 3","protein_coding"
"Cre03.g186250","No alias","Chlamydomonas reinhardtii","ABC1 family protein","protein_coding"
"Cre03.g197500","No alias","Chlamydomonas reinhardtii","EF hand calcium-binding protein family","protein_coding"
"Cre03.g202150","No alias","Chlamydomonas reinhardtii","chromomethylase 2","protein_coding"
"Cre03.g203345","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g203451","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre04.g212700","No alias","Chlamydomonas reinhardtii","squamosa promoter binding protein-like 9","protein_coding"
"Cre04.g213652","No alias","Chlamydomonas reinhardtii","telomerase reverse transcriptase","protein_coding"
"Cre04.g215001","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre04.g218500","No alias","Chlamydomonas reinhardtii","NAD(P)-linked oxidoreductase superfamily protein","protein_coding"
"Cre04.g218600","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre04.g226200","No alias","Chlamydomonas reinhardtii","NIMA-related kinase 2","protein_coding"
"Cre05.g240500","No alias","Chlamydomonas reinhardtii","Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2","protein_coding"
"Cre06.g256650","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g258226","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g260650","No alias","Chlamydomonas reinhardtii","Protein of unknown function (DUF288)","protein_coding"
"Cre06.g260800","No alias","Chlamydomonas reinhardtii","protein binding","protein_coding"
"Cre06.g287550","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g295826","No alias","Chlamydomonas reinhardtii","Integral membrane HPP family protein","protein_coding"
"Cre06.g304500","No alias","Chlamydomonas reinhardtii","chloroplast signal recognition particle component (CAO)","protein_coding"
"Cre07.g325150","No alias","Chlamydomonas reinhardtii","alpha/beta-Hydrolases superfamily protein","protein_coding"
"Cre07.g331150","No alias","Chlamydomonas reinhardtii","Cupredoxin superfamily protein","protein_coding"
"Cre07.g339500","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre07.g347600","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre07.g350550","No alias","Chlamydomonas reinhardtii","endonuclease/exonuclease/phosphatase family protein","protein_coding"
"Cre08.g361900","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre08.g366750","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre08.g373916","No alias","Chlamydomonas reinhardtii","exoribonuclease 2","protein_coding"
"Cre08.g378000","No alias","Chlamydomonas reinhardtii","decapping 5-like","protein_coding"
"Cre08.g380151","No alias","Chlamydomonas reinhardtii","methyl-CPG-binding domain 9","protein_coding"
"Cre09.g386143","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g388949","No alias","Chlamydomonas reinhardtii","SET domain group 37","protein_coding"
"Cre09.g390000","No alias","Chlamydomonas reinhardtii","chromatin remodeling factor17","protein_coding"
"Cre09.g394436","No alias","Chlamydomonas reinhardtii","Inorganic H pyrophosphatase family protein","protein_coding"
"Cre09.g396994","No alias","Chlamydomonas reinhardtii","cytochrome P450, family 711, subfamily A, polypeptide 1","protein_coding"
"Cre09.g397845","No alias","Chlamydomonas reinhardtii","MUTS homolog 6","protein_coding"
"Cre09.g402182","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g406500","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g409500","No alias","Chlamydomonas reinhardtii","Alba DNA/RNA-binding protein","protein_coding"
"Cre09.g410100","No alias","Chlamydomonas reinhardtii","ER-type Ca2+-ATPase 1","protein_coding"
"Cre09.g415450","No alias","Chlamydomonas reinhardtii","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Cre09.g416700","No alias","Chlamydomonas reinhardtii","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding"
"Cre10.g423800","No alias","Chlamydomonas reinhardtii","Ku80 family protein","protein_coding"
"Cre10.g425251","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g426750","No alias","Chlamydomonas reinhardtii","cytochrome P450, family 707, subfamily A, polypeptide 1","protein_coding"
"Cre10.g434850","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g439800","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre10.g447500","No alias","Chlamydomonas reinhardtii","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Cre10.g465450","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre11.g478000","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre11.g481400","No alias","Chlamydomonas reinhardtii","Protein kinase superfamily protein","protein_coding"
"Cre11.g483301","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g489350","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g492851","No alias","Chlamydomonas reinhardtii","Glycosyl hydrolase superfamily protein","protein_coding"
"Cre12.g521200","No alias","Chlamydomonas reinhardtii","replication factor C1","protein_coding"
"Cre12.g521450","No alias","Chlamydomonas reinhardtii","nuclear-encoded CLP protease P7","protein_coding"
"Cre12.g521800","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g524350","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g531750","No alias","Chlamydomonas reinhardtii","Arabidopsis thaliana protein of unknown function (DUF821)","protein_coding"
"Cre12.g534750","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g546700","No alias","Chlamydomonas reinhardtii","EMBRYO DEFECTIVE 140","protein_coding"
"Cre12.g551550","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g553950","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g555550","No alias","Chlamydomonas reinhardtii","villin 3","protein_coding"
"Cre12.g555600","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g556650","No alias","Chlamydomonas reinhardtii","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"Cre12.g556911","No alias","Chlamydomonas reinhardtii","DNA repair and meiosis protein (Mre11)","protein_coding"
"Cre13.g562950","No alias","Chlamydomonas reinhardtii","anaphase promoting complex 6","protein_coding"
"Cre13.g568950","No alias","Chlamydomonas reinhardtii","Inosine triphosphate pyrophosphatase family protein","protein_coding"
"Cre13.g575950","No alias","Chlamydomonas reinhardtii","homolog of histone chaperone HIRA","protein_coding"
"Cre13.g576250","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre13.g576800","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre13.g578100","No alias","Chlamydomonas reinhardtii","Protein of unknown function (DUF3414)","protein_coding"
"Cre13.g578400","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre13.g578501","No alias","Chlamydomonas reinhardtii","RING/FYVE/PHD zinc finger superfamily protein","protein_coding"
"Cre13.g579100","No alias","Chlamydomonas reinhardtii","E3 ubiquitin ligase, putative","protein_coding"
"Cre13.g583100","No alias","Chlamydomonas reinhardtii","KDO transferase A","protein_coding"
"Cre13.g584600","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre13.g587750","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre13.g587800","No alias","Chlamydomonas reinhardtii","Protein of unknown function (DUF3414)","protein_coding"
"Cre14.g629880","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre14.g632501","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre14.g633903","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre15.g636250","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g670501","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g670550","No alias","Chlamydomonas reinhardtii","5\'-3\' exonuclease family protein","protein_coding"
"Cre16.g672850","No alias","Chlamydomonas reinhardtii","Cytochrome b561/ferric reductase transmembrane with DOMON related domain","protein_coding"
"Cre16.g675602","No alias","Chlamydomonas reinhardtii","Oligosaccharyltransferase complex/magnesium transporter family protein","protein_coding"
"Cre16.g681578","No alias","Chlamydomonas reinhardtii","anaphase-promoting complex subunit 8","protein_coding"
"Cre16.g682950","No alias","Chlamydomonas reinhardtii","cell cycle checkpoint control protein family","protein_coding"
"Cre16.g686552","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g686900","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g695851","No alias","Chlamydomonas reinhardtii","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein","protein_coding"
"Cre17.g711450","No alias","Chlamydomonas reinhardtii","syntaxin of plants 81","protein_coding"
"Cre17.g718600","No alias","Chlamydomonas reinhardtii","alpha/beta-Hydrolases superfamily protein","protein_coding"
"Cre17.g718850","No alias","Chlamydomonas reinhardtii","replication protein A 1A","protein_coding"
"Cre17.g740550","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre17.g745447","No alias","Chlamydomonas reinhardtii","MAP kinase 15","protein_coding"
"Cre17.g746247","No alias","Chlamydomonas reinhardtii","SET domain-containing protein","protein_coding"
"evm.model.contig_2015.4","No alias","Porphyridium purpureum","(at2g20495 : 91.3) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Serine-threonine protein kinase 19 (InterPro:IPR018865); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 182.6) &  (original description: no original description)","protein_coding"
"evm.model.contig_2016.18","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2016.19","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2016.7","No alias","Porphyridium purpureum","(at3g30380 : 140.0) alpha/beta-Hydrolases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G01690.1); Has 4039 Blast hits to 4030 proteins in 818 species: Archae - 8; Bacteria - 1345; Metazoa - 714; Fungi - 203; Plants - 307; Viruses - 6; Other Eukaryotes - 1456 (source: NCBI BLink). & (reliability: 280.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2017.11","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2020.25","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2020.26","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2025.68","No alias","Porphyridium purpureum","(at4g26500 : 190.0) Sulfur acceptor that interacts with and activates the cysteine desulfurases, AtSufS in plastids and AtNifS1 in mitochondria, and both activations are vital during embryogenesis. Dual localization in mitochondria and chloroplasts. Involved in Fe-S cluster biogenesis in mitochondria and plastids. Expressed in all major tissues, with higher expression in green parts. Its expression is light-dependent and regulated at the mRNA level. Activates the cysteine  desulfurase activity of CpNifS for chloroplastic iron-sulfur cluster  biogenesis.; chloroplast sulfur E (CPSUFE); FUNCTIONS IN: enzyme activator activity, transcription regulator activity; INVOLVED IN: iron-sulfur cluster assembly, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fe-S metabolism associated SufE (InterPro:IPR003808), BolA-like protein (InterPro:IPR002634); BEST Arabidopsis thaliana protein match is: BolA-like family protein (TAIR:AT1G55805.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 380.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2030.12","No alias","Porphyridium purpureum","(at5g55630 : 111.0) Encodes AtTPK1 (KCO1), a member of the Arabidopsis thaliana K+ channel family of AtTPK/KCO proteins. AtTPK1 is targeted to the vacuolar membrane. Forms homomeric ion channels in vivo. Voltage-independent and Ca2+-activated K+ channel. Activated by 14-3-3 proteins.; TWO PORE K CHANNEL (KCO1); CONTAINS InterPro DOMAIN/s: Potassium channel, two pore-domain (InterPro:IPR003280), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Ion transport 2 (InterPro:IPR013099); BEST Arabidopsis thaliana protein match is: Ca2+ activated outward rectifying K+ channel 5 (TAIR:AT4G01840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 222.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2030.4","No alias","Porphyridium purpureum","(at1g15110 : 179.0) phosphatidyl serine synthase family protein; FUNCTIONS IN: CDP-diacylglycerol-serine O-phosphatidyltransferase activity; INVOLVED IN: phosphatidylserine biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidyl serine synthase (InterPro:IPR004277); Has 335 Blast hits to 331 proteins in 117 species: Archae - 0; Bacteria - 0; Metazoa - 175; Fungi - 10; Plants - 65; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (reliability: 358.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2032.30","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2032.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2033.24","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2033.29","No alias","Porphyridium purpureum","(at5g14460 : 109.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity, transporter activity; INVOLVED IN: pseudouridine synthesis, RNA modification, RNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase II, TruB, N-terminal, bacterial-type (InterPro:IPR014780), Pseudouridine synthase II, TruB, N-terminal (InterPro:IPR002501); BEST Arabidopsis thaliana protein match is: homologue of NAP57 (TAIR:AT3G57150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 218.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2039.5","No alias","Porphyridium purpureum","(at5g64840 : 251.0) member of GCN subfamily; general control non-repressible 5 (GCN5); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC transporter family protein (TAIR:AT5G09930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 502.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2044.26","No alias","Porphyridium purpureum",""(at3g47930 : 432.0) L-Galactono-1,4-lactone dehydrogenase, catalyzes the final step of ascorbate biosynthesis; ""L-galactono-1,4-lactone dehydrogenase"" (GLDH); CONTAINS InterPro DOMAIN/s: D-arabinono-1,4-lactone oxidase (InterPro:IPR007173), FAD-binding, type 2 (InterPro:IPR016166), Galactonolactone dehydrogenase (InterPro:IPR010029), Actin-binding FH2 (InterPro:IPR015425), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: D-arabinono-1,4-lactone oxidase family protein (TAIR:AT5G56490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 864.0) &  (original description: no original description)"","protein_coding"
"evm.model.contig_2046.1","No alias","Porphyridium purpureum","(at1g18260 : 96.7) HCP-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Sel1-like (InterPro:IPR006597); BEST Arabidopsis thaliana protein match is: HCP-like superfamily protein (TAIR:AT1G73570.1); Has 24350 Blast hits to 8436 proteins in 1359 species: Archae - 0; Bacteria - 17163; Metazoa - 848; Fungi - 960; Plants - 547; Viruses - 27; Other Eukaryotes - 4805 (source: NCBI BLink). & (reliability: 193.4) &  (original description: no original description)","protein_coding"
"evm.model.contig_2048.12","No alias","Porphyridium purpureum","(at1g15730 : 161.0) Cobalamin biosynthesis CobW-like protein; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12) biosynthesis CobW-like (InterPro:IPR003495), Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal (InterPro:IPR011629); BEST Arabidopsis thaliana protein match is: plastid transcriptionally active 17 (TAIR:AT1G80480.1); Has 16369 Blast hits to 11834 proteins in 1861 species: Archae - 128; Bacteria - 8189; Metazoa - 1729; Fungi - 553; Plants - 409; Viruses - 6; Other Eukaryotes - 5355 (source: NCBI BLink). & (reliability: 302.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2057.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2060.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2062.18","No alias","Porphyridium purpureum","(at3g18480 : 100.0) This gene is predicted to encode a protein that functions as a Golgi apparatus structural component, known as a golgin in mammals and yeast.  A fluorescently-tagged version of CASP co-localizes with Golgi markers, and this localization appears to require the C-terminal (565ñ689aa) portion of the protein. The protein is inserted into a membrane in a type II orientation.; CCAAT-displacement protein alternatively spliced product (CASP); INVOLVED IN: intra-Golgi vesicle-mediated transport; LOCATED IN: integral to membrane, Golgi apparatus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CASP, C-terminal (InterPro:IPR012955); Has 108439 Blast hits to 62245 proteins in 2877 species: Archae - 1242; Bacteria - 16953; Metazoa - 49041; Fungi - 8922; Plants - 5181; Viruses - 394; Other Eukaryotes - 26706 (source: NCBI BLink). & (reliability: 200.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2070.11","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2072.5","No alias","Porphyridium purpureum","(at3g06483 : 182.0) Pyruvate dehydrogenase kinase (PDK) specifically phosphorylates the E1α subunit of the pyruvate dehydrogenase complex (PDC) on a Ser residue using ATP as a phosphate donor.  PDK is a unique type of protein kinase having a His-kinase-like sequence but Ser-kinase activity. Site-directed mutagenesis and structural analysis indicate that PDK belongs to the GHKL superfamily.; pyruvate dehydrogenase kinase (PDK); FUNCTIONS IN: ATP binding, pyruvate dehydrogenase (acetyl-transferring) kinase activity, histidine phosphotransfer kinase activity; INVOLVED IN: signal transduction, peptidyl-histidine phosphorylation, phosphorylation; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, core (InterPro:IPR005467), Branched-chain alpha-ketoacid dehydrogenase kinase/Pyruvate dehydrogenase kinase, mitochondrial (InterPro:IPR018955), ATPase-like, ATP-binding domain (InterPro:IPR003594), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); Has 1925 Blast hits to 1799 proteins in 531 species: Archae - 0; Bacteria - 712; Metazoa - 467; Fungi - 468; Plants - 102; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink). & (reliability: 364.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2079.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2081.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2083.2","No alias","Porphyridium purpureum","(at5g01310 : 108.0) Encodes a protein that has adenylylsulfate sulfohydrolase activity (E.C. 3.6.2.1) in vitro.; APRATAXIN-like (APTX); FUNCTIONS IN: adenylylsulfatase activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: sulfur metabolic process, purine ribonucleotide metabolic process, regulation of transcription; LOCATED IN: intracellular, nucleus, chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Appr-1-p processing (InterPro:IPR002589), Histidine triad (HIT) protein (InterPro:IPR001310), Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Histidine triad motif (InterPro:IPR011151), Helix-loop-helix DNA-binding (InterPro:IPR011598), Histidine triad-like motif (InterPro:IPR011146), Histidine triad, conserved site (InterPro:IPR019808); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G21330.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 216.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2084.1","No alias","Porphyridium purpureum","(at1g65070 : 295.0) DNA mismatch repair protein MutS, type 2; FUNCTIONS IN: damaged DNA binding, mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair, maintenance of fidelity involved in DNA-dependent DNA replication; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein MutS, core (InterPro:IPR007696), DNA mismatch repair protein MutS, type 2 (InterPro:IPR005747), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), Smr protein/MutS2 C-terminal (InterPro:IPR002625); BEST Arabidopsis thaliana protein match is: DNA mismatch repair protein MutS, type 2 (TAIR:AT5G54090.1). & (reliability: 590.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2085.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2088.11","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2089.13","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2090.12","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2090.24","No alias","Porphyridium purpureum","(q8li34|myst1_orysa : 355.0) Putative MYST-like histone acetyltransferase 1 (EC 2.3.1.48) - Oryza sativa (Rice) & (at5g09740 : 342.0) Encodes an enzyme with histone acetyltransferase activity. HAM2 primarily acetylate histone H4, but also  display some ability to acetylate H3. Prior acetylation of lysine 5 on histone H4  reduces radioactive acetylation by either HAM2.; histone acetyltransferase of the MYST family 2 (HAM2); FUNCTIONS IN: histone acetyltransferase activity, zinc ion binding, nucleic acid binding; INVOLVED IN: chromatin assembly or disassembly, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Chromo domain (InterPro:IPR000953), Acyl-CoA N-acyltransferase (InterPro:IPR016181), MOZ/SAS-like protein (InterPro:IPR002717); BEST Arabidopsis thaliana protein match is: histone acetyltransferase of the MYST family 1 (TAIR:AT5G64610.1); Has 1870 Blast hits to 1533 proteins in 232 species: Archae - 0; Bacteria - 4; Metazoa - 1014; Fungi - 461; Plants - 151; Viruses - 0; Other Eukaryotes - 240 (source: NCBI BLink). & (reliability: 684.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2096.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2096.12","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2098.15","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2115.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2117.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2126.1","No alias","Porphyridium purpureum","(at1g69523 : 150.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G69526.2); Has 8414 Blast hits to 8405 proteins in 1811 species: Archae - 286; Bacteria - 5877; Metazoa - 213; Fungi - 292; Plants - 233; Viruses - 0; Other Eukaryotes - 1513 (source: NCBI BLink). & (reliability: 300.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2126.2","No alias","Porphyridium purpureum","(at1g35670 : 150.0) Encodes a Ca(2+)-dependent, calmodulin-independent protein kinase that is rapidly induced by drought and high-salt stress but not by low-temperature stress or heat stress. Positive regulator of ABA signaling. Phosphorylates ABA responsive transcription factors ABF1 and ABF4.; calcium-dependent protein kinase 2 (CDPK2); FUNCTIONS IN: calmodulin-dependent protein kinase activity, kinase activity; INVOLVED IN: response to water deprivation, response to salt stress, protein amino acid phosphorylation, positive regulation of abscisic acid mediated signaling pathway; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 4 (TAIR:AT4G09570.1); Has 134131 Blast hits to 125244 proteins in 4234 species: Archae - 175; Bacteria - 14420; Metazoa - 49980; Fungi - 18055; Plants - 27559; Viruses - 606; Other Eukaryotes - 23336 (source: NCBI BLink). & (p53684|cdpk3_orysa : 144.0) Calcium-dependent protein kinase, isoform 11 (EC 2.7.11.1) (CDPK 11) - Oryza sativa (Rice) & (reliability: 270.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2144.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2146.11","No alias","Porphyridium purpureum","(at5g60540 : 138.0) Encodes a protein predicted to function in tandem with PDX1 to form glutamine amidotransferase complex with involved in vitamin B6 biosynthesis. PDX2 is predicted to function as glutaminase within the complex.; pyridoxine biosynthesis 2 (PDX2); CONTAINS InterPro DOMAIN/s: PdxT/SNO family, conserved site (InterPro:IPR021196), SNO glutamine amidotransferase (InterPro:IPR002161); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 276.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2157.12","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding"
"evm.model.contig_2157.15","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2157.16","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2171.3","No alias","Porphyridium purpureum","(at1g03140 : 120.0) splicing factor Prp18 family protein; INVOLVED IN: RNA splicing; LOCATED IN: spliceosomal complex; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Pre-mRNA processing factor 4 (PRP4) like (InterPro:IPR014906), Splicing factor motif (InterPro:IPR003648), Prp18 (InterPro:IPR004098); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54590.1); Has 624 Blast hits to 613 proteins in 206 species: Archae - 0; Bacteria - 5; Metazoa - 235; Fungi - 175; Plants - 58; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink). & (reliability: 240.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2184.1","No alias","Porphyridium purpureum","(q53ni2|nadk2_orysa : 226.0) Probable NAD kinase 2, chloroplast precursor (EC 2.7.1.23) - Oryza sativa (Rice) & (at1g21640 : 224.0) Encodes a protein with NAD kinase activity. The protein was also shown to bind calmodulin.; NAD kinase 2 (NADK2); FUNCTIONS IN: NAD+ kinase activity, calmodulin binding; INVOLVED IN: pyridine nucleotide biosynthetic process, metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATP-NAD kinase, PpnK-type, alpha/beta (InterPro:IPR017438), ATP-NAD kinase, PpnK-type (InterPro:IPR016064), ATP-NAD/AcoX kinase (InterPro:IPR002504), ATP-NAD kinase, PpnK-type, all-beta (InterPro:IPR017437); BEST Arabidopsis thaliana protein match is: NAD kinase 1 (TAIR:AT3G21070.2). & (reliability: 410.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2209.2","No alias","Porphyridium purpureum","(at3g05480 : 92.0) Involved in the regulation of DNA damage repair and homologous recombination.; RAD9; CONTAINS InterPro DOMAIN/s: Rad9 (InterPro:IPR007268), Cell cycle checkpoint, RAD9 (InterPro:IPR016552). & (reliability: 184.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2211.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2225.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2244.2","No alias","Porphyridium purpureum","(at4g27745 : 132.0) Yippee family putative zinc-binding protein; CONTAINS InterPro DOMAIN/s: Yippee-like protein (InterPro:IPR004910); BEST Arabidopsis thaliana protein match is: Yippee family putative zinc-binding protein (TAIR:AT5G53940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p59234|yipl_soltu : 120.0) Protein yippee-like - Solanum tuberosum (Potato) & (reliability: 242.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2262.7","No alias","Porphyridium purpureum","(at4g27080 : 144.0) putative protein; PDI-like 5-4 (PDIL5-4); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), Thioredoxin domain (InterPro:IPR013766), Protein of unknown function DUF1692 (InterPro:IPR012936); BEST Arabidopsis thaliana protein match is: PDI-like 5-3 (TAIR:AT3G20560.1); Has 8490 Blast hits to 6181 proteins in 1071 species: Archae - 57; Bacteria - 1584; Metazoa - 3355; Fungi - 1092; Plants - 1073; Viruses - 5; Other Eukaryotes - 1324 (source: NCBI BLink). & (reliability: 288.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2275.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2281.3","No alias","Porphyridium purpureum","(at1g18260 : 118.0) HCP-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Sel1-like (InterPro:IPR006597); BEST Arabidopsis thaliana protein match is: HCP-like superfamily protein (TAIR:AT1G73570.1); Has 24350 Blast hits to 8436 proteins in 1359 species: Archae - 0; Bacteria - 17163; Metazoa - 848; Fungi - 960; Plants - 547; Viruses - 27; Other Eukaryotes - 4805 (source: NCBI BLink). & (gnl|cdd|68872 : 112.0) no description available & (reliability: 236.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2282.19","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2282.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2282.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2286.5","No alias","Porphyridium purpureum","(at5g03730 : 97.4) Homologous to the RAF family of serine/threonine protein kinases. Negative regulator in the ethylene signal transduction pathway. Interacts with the putative ethylene receptors ETR1 and ERS. Constitutively expressed.; CONSTITUTIVE TRIPLE RESPONSE 1 (CTR1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G24480.1); Has 126606 Blast hits to 124675 proteins in 4966 species: Archae - 112; Bacteria - 13843; Metazoa - 48138; Fungi - 11278; Plants - 33351; Viruses - 509; Other Eukaryotes - 19375 (source: NCBI BLink). & (q8l4h4|nork_medtr : 80.9) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 194.8) &  (original description: no original description)","protein_coding"
"evm.model.contig_2289.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2307.3","No alias","Porphyridium purpureum","(gnl|cdd|68872 : 110.0) no description available & (at5g22830 : 82.8) Transmembrane magnesium transporter. One of nine family members.; magnesium (Mg) transporter 10 (MGT10); FUNCTIONS IN: magnesium ion transmembrane transporter activity; INVOLVED IN: magnesium ion transport; LOCATED IN: chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mg2+ transporter protein, CorA-like (InterPro:IPR002523); BEST Arabidopsis thaliana protein match is: magnesium transporter 7 (TAIR:AT5G09690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 165.6) &  (original description: no original description)","protein_coding"
"evm.model.contig_2313.4","No alias","Porphyridium purpureum","(at5g58140 : 270.0) Membrane-bound protein serine/threonine kinase that functions as blue light photoreceptor in redundancy with PHO1. Involved in stomatal opening, chloroplast movement and phototropism. Mediates blue light-induced growth enhancements. PHOT1 and PHOT2 mediate blue light-dependent activation of the plasma membrane H+-ATPase in guard cell protoplasts. PHOT2 possesses two LOV (LOV1 and LOV2, for light-oxygen-voltage-sensing) domains involved in FMN-binding and a C-terminus forming a serine/threonine kinase domain. LOV2 acts as an inhibitor of phototropin kinase in the dark, and light cancels the inhibition through cysteine-FMN adduct formation. LOV1 in contrast acts as an attenuator of photoactivation.  Localized to the Golgi apparatus under the induction of blue light.; phototropin 2 (PHOT2); FUNCTIONS IN: protein serine/threonine kinase activity, FMN binding, kinase activity, blue light photoreceptor activity; INVOLVED IN: in 7 processes; LOCATED IN: Golgi apparatus, plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Protein kinase, ATP binding site (InterPro:IPR017441), PAS fold (InterPro:IPR013767), Serine/threonine-protein kinase domain (InterPro:IPR002290), PAS (InterPro:IPR000014), PAS-associated, C-terminal (InterPro:IPR000700), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: phototropin 1 (TAIR:AT3G45780.2); Has 25181 Blast hits to 21357 proteins in 1460 species: Archae - 236; Bacteria - 6754; Metazoa - 8411; Fungi - 2718; Plants - 3113; Viruses - 9; Other Eukaryotes - 3940 (source: NCBI BLink). & (p15792|kpk1_phavu : 259.0) Protein kinase PVPK-1 (EC 2.7.11.1) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 540.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2345.14","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2345.15","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2350.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2391.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2468.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2484.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2489.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2494.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2500.14","No alias","Porphyridium purpureum","(at3g19490 : 498.0) member of Na+/H+ antiporter-Putative family; sodium:hydrogen antiporter 1 (NHD1); FUNCTIONS IN: potassium:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: sodium ion transport; LOCATED IN: integral to membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Na+/H+ antiporter NhaD-like (InterPro:IPR018390), Divalent ion symporter (InterPro:IPR004680); BEST Arabidopsis thaliana protein match is: Na+/H+ antiporter 2 (TAIR:AT1G49810.1); Has 2659 Blast hits to 2653 proteins in 794 species: Archae - 96; Bacteria - 1787; Metazoa - 39; Fungi - 48; Plants - 76; Viruses - 0; Other Eukaryotes - 613 (source: NCBI BLink). & (reliability: 996.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2506.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2507.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2510.1","No alias","Porphyridium purpureum","(at5g46910 : 200.0) Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to chitin, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Zinc finger, C5HC2-type (InterPro:IPR004198), Transcription factor jumonji (InterPro:IPR013129), Transcription factor jumonji, JmjN (InterPro:IPR003349); BEST Arabidopsis thaliana protein match is: relative of early flowering 6 (TAIR:AT3G48430.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 400.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2706.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3388.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3397.26","No alias","Porphyridium purpureum","(at4g27040 : 188.0) VPS22; CONTAINS InterPro DOMAIN/s: ESCRT-2 complex, Snf8 (InterPro:IPR016689), EAP30 (InterPro:IPR007286); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 376.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3397.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3399.12","No alias","Porphyridium purpureum","(o23920|hppd_dauca : 176.0) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) (4HPPD) (HPD) (HPPDase) (4-hydroxyphenylpyruvic acid oxidase) - Daucus carota (Carrot) & (at1g06570 : 160.0) Mutation of the PDS1 locus disrupts the activity of p-hydroxyphenylpyruvate dioxygenase (HPPDase), the first committed step in the synthesis of both plastoquinone and tocopherols in plants.; phytoene desaturation 1 (PDS1); CONTAINS InterPro DOMAIN/s: 4-hydroxyphenylpyruvate dioxygenase (InterPro:IPR005956), Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360); Has 2393 Blast hits to 2392 proteins in 824 species: Archae - 3; Bacteria - 1672; Metazoa - 205; Fungi - 157; Plants - 91; Viruses - 0; Other Eukaryotes - 265 (source: NCBI BLink). & (reliability: 320.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3401.7","No alias","Porphyridium purpureum","(at1g54570 : 213.0) Esterase/lipase/thioesterase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; LOCATED IN: chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Diacylglycerol acyltransferase (InterPro:IPR007130); BEST Arabidopsis thaliana protein match is: Esterase/lipase/thioesterase family protein (TAIR:AT5G41130.1); Has 651 Blast hits to 637 proteins in 188 species: Archae - 0; Bacteria - 283; Metazoa - 139; Fungi - 19; Plants - 149; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). & (reliability: 426.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3404.4","No alias","Porphyridium purpureum","(at3g45090 : 176.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G60760.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 352.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3404.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3404.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3416.10","No alias","Porphyridium purpureum","(at5g19910 : 115.0) MED31; FUNCTIONS IN: RNA polymerase II transcription mediator activity; INVOLVED IN: regulation of transcription; LOCATED IN: mediator complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med31 (InterPro:IPR008831). & (reliability: 230.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3416.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3416.8","No alias","Porphyridium purpureum","(at1g08700 : 121.0) Encodes a protein similar to animal presenilin whose expression is increased in response to potassium (K+) deprivation.; Presenilin-1 (PS1); INVOLVED IN: intracellular signaling pathway; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase A22, presenilin signal peptide (InterPro:IPR006639), Peptidase A22A, presenilin (InterPro:IPR001108); BEST Arabidopsis thaliana protein match is: Presenilin-2 (TAIR:AT2G29900.1); Has 596 Blast hits to 445 proteins in 109 species: Archae - 4; Bacteria - 0; Metazoa - 417; Fungi - 0; Plants - 68; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (reliability: 242.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3419.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3419.8","No alias","Porphyridium purpureum","(at2g35920 : 336.0) RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G04895.1); Has 15667 Blast hits to 10761 proteins in 1709 species: Archae - 0; Bacteria - 5024; Metazoa - 4470; Fungi - 1848; Plants - 1329; Viruses - 777; Other Eukaryotes - 2219 (source: NCBI BLink). & (reliability: 672.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3423.13","No alias","Porphyridium purpureum","(at1g79720 : 82.0) Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: apoplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G10770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 160.2) &  (original description: no original description)","protein_coding"
"evm.model.contig_3423.25","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3427.9","No alias","Porphyridium purpureum","(at5g19500 : 271.0) Tryptophan/tyrosine permease; CONTAINS InterPro DOMAIN/s: Tryptophan/tyrosine permease (InterPro:IPR018227); BEST Arabidopsis thaliana protein match is: Tryptophan/tyrosine permease (TAIR:AT2G33260.1); Has 3446 Blast hits to 3440 proteins in 699 species: Archae - 29; Bacteria - 3077; Metazoa - 10; Fungi - 2; Plants - 199; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). & (reliability: 542.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3432.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3441.11","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3448.4","No alias","Porphyridium purpureum",""(at3g50000 : 369.0) casein kinase II catalytic subunit alpha; ""casein kinase II, alpha chain 2"" (CKA2); FUNCTIONS IN: protein binding, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: casein kinase alpha 1 (TAIR:AT5G67380.1); Has 86321 Blast hits to 85419 proteins in 2558 species: Archae - 72; Bacteria - 9686; Metazoa - 32978; Fungi - 11348; Plants - 15028; Viruses - 319; Other Eukaryotes - 16890 (source: NCBI BLink). & (p28523|csk2a_maize : 365.0) Casein kinase II subunit alpha (EC 2.7.11.1) (CK II) (CK2-alpha) - Zea mays (Maize) & (reliability: 738.0) &  (original description: no original description)"","protein_coding"
"evm.model.contig_3451.15","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3453.3","No alias","Porphyridium purpureum","(at2g28880 : 463.0) embryo defective 1997 (emb1997); FUNCTIONS IN: oxo-acid-lyase activity, catalytic activity, anthranilate synthase activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Glutamine amidotransferase superfamily (InterPro:IPR011702), Anthranilate synthase, glutamine amidotransferase domain (InterPro:IPR006221), Carbamoyl phosphate synthase, GATase domain (InterPro:IPR001317), Anthranilate synthase component I, N-terminal (InterPro:IPR006805), Chorismate binding, C-terminal (InterPro:IPR015890), ADC synthase (InterPro:IPR005801), Para-aminobenzoate synthase, component I (InterPro:IPR005802), Glutamine amidotransferase type 1 (InterPro:IPR017926), Anthranilate synthase component II/delta crystallin (InterPro:IPR006220); BEST Arabidopsis thaliana protein match is: anthranilate synthase 2 (TAIR:AT2G29690.1); Has 26955 Blast hits to 26481 proteins in 3128 species: Archae - 525; Bacteria - 17829; Metazoa - 510; Fungi - 766; Plants - 261; Viruses - 0; Other Eukaryotes - 7064 (source: NCBI BLink). & (reliability: 926.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3456.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3484.1","No alias","Porphyridium purpureum","(q7f0r1|png1_orysa : 221.0) Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase (EC 3.5.1.52) (Peptide:N-glycanase) - Oryza sativa (Rice) & (at5g49570 : 215.0) Encodes a protein that has peptide:N-glycanase activity in enzymatic assay in heterologous systems (although the activity was not detected in wild-type plants).; peptide-N-glycanase 1 (PNG1); CONTAINS InterPro DOMAIN/s: Transglutaminase-like (InterPro:IPR002931), DNA repair protein Rad4, transglutaminase-like domain (InterPro:IPR018325), Galactose-binding domain-like (InterPro:IPR008979); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 430.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3487.6","No alias","Porphyridium purpureum","(at2g04845 : 128.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), Acyl-CoA N-acyltransferase (InterPro:IPR016181); Has 393 Blast hits to 383 proteins in 188 species: Archae - 0; Bacteria - 98; Metazoa - 122; Fungi - 80; Plants - 36; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). & (reliability: 256.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3490.10","No alias","Porphyridium purpureum","(at5g64380 : 306.0) Inositol monophosphatase family protein; FUNCTIONS IN: phosphoric ester hydrolase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fructose-1,6-bisphosphatase (InterPro:IPR000146); BEST Arabidopsis thaliana protein match is: high cyclic electron flow 1 (TAIR:AT3G54050.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p46275|f16p1_pea : 248.0) Fructose-1,6-bisphosphatase, chloroplast precursor (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase) (FBPase) - Pisum sativum (Garden pea) & (reliability: 612.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3490.3","No alias","Porphyridium purpureum","(at4g38020 : 80.1) tRNA/rRNA methyltransferase (SpoU) family protein; FUNCTIONS IN: RNA binding, RNA methyltransferase activity; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA/rRNA methyltransferase, SpoU (InterPro:IPR001537); Has 12174 Blast hits to 12170 proteins in 2688 species: Archae - 7; Bacteria - 9680; Metazoa - 153; Fungi - 96; Plants - 106; Viruses - 0; Other Eukaryotes - 2132 (source: NCBI BLink). & (reliability: 160.2) &  (original description: no original description)","protein_coding"
"evm.model.contig_3510.7","No alias","Porphyridium purpureum","(at3g17000 : 173.0) ubiquitin-conjugating enzyme 32 (UBC32); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 34 (TAIR:AT1G17280.2); Has 7916 Blast hits to 7914 proteins in 379 species: Archae - 0; Bacteria - 0; Metazoa - 3544; Fungi - 1602; Plants - 1492; Viruses - 20; Other Eukaryotes - 1258 (source: NCBI BLink). & (reliability: 346.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3511.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3524.9","No alias","Porphyridium purpureum","(at1g80360 : 137.0) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: transferase activity, transferring nitrogenous groups, pyridoxal phosphate binding, transaminase activity, catalytic activity; INVOLVED IN: asparagine catabolic process, biosynthetic process, glutamate catabolic process to oxaloacetate, aspartate transamidation; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: aspartate aminotransferase (TAIR:AT2G22250.1); Has 39039 Blast hits to 39038 proteins in 3030 species: Archae - 1022; Bacteria - 27880; Metazoa - 604; Fungi - 771; Plants - 1310; Viruses - 0; Other Eukaryotes - 7452 (source: NCBI BLink). & (reliability: 274.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3532.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3553.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3555.2","No alias","Porphyridium purpureum","(at1g12350 : 132.0) At1g12350 encodes phosphopantothenoylcysteine synthetase (phosphopantothenoylcysteine ligase). Its molecular function was shown to add cysteine forming (R)-4í-phospho-N-pantothenoylcysteine (PPC); 4-phospho-panto-thenoylcysteine synthetase (COAB); FUNCTIONS IN: phosphopantothenate--cysteine ligase activity, catalytic activity; INVOLVED IN: coenzyme A biosynthetic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: DNA/pantothenate metabolism flavoprotein, C-terminal (InterPro:IPR007085); BEST Arabidopsis thaliana protein match is: DNA / pantothenate metabolism flavoprotein (TAIR:AT5G02080.1); Has 721 Blast hits to 697 proteins in 349 species: Archae - 42; Bacteria - 251; Metazoa - 127; Fungi - 134; Plants - 66; Viruses - 4; Other Eukaryotes - 97 (source: NCBI BLink). & (reliability: 264.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3573.10","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3601.9","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3618.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3646.2","No alias","Porphyridium purpureum","(at4g39910 : 324.0) Encodes a nuclear ubiquitin-specific protease.; ubiquitin-specific protease 3 (UBP3); CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 4 (TAIR:AT2G22310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 648.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3699.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3715.1","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding"
"evm.model.contig_3800.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4398.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_440.1","No alias","Porphyridium purpureum","(at2g29940 : 522.0) pleiotropic drug resistance 3 (PDR3); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: drug transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 12 (TAIR:AT1G15520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q7fmw4|pdr15_orysa : 493.0) Pleiotropic drug resistance protein 15 - Oryza sativa (Rice) & (reliability: 1044.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4403.18","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4404.23","No alias","Porphyridium purpureum","(at2g04560 : 111.0) transferases, transferring glycosyl groups; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: lipid A biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 19 (InterPro:IPR003835); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 222.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4404.26","No alias","Porphyridium purpureum","(at3g15620 : 432.0) Required for photorepair of 6-4 photoproducts in Arabidopsis thaliana.; UV REPAIR DEFECTIVE 3 (UVR3); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), DNA photolyase, N-terminal (InterPro:IPR006050), DNA photolyase, FAD-binding/Cryptochrome, C-terminal (InterPro:IPR005101); BEST Arabidopsis thaliana protein match is: cryptochrome 3 (TAIR:AT5G24850.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q651u1|cryd_orysa : 135.0) Cryptochrome DASH, chloroplast/mitochondrial precursor - Oryza sativa (Rice) & (reliability: 864.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4405.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4406.2","No alias","Porphyridium purpureum","(at1g52590 : 110.0) Putative thiol-disulphide oxidoreductase DCC; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Putative thiol-disulphide oxidoreductase DCC (InterPro:IPR007263); BEST Arabidopsis thaliana protein match is: Putative thiol-disulphide oxidoreductase DCC (TAIR:AT1G24095.1); Has 955 Blast hits to 955 proteins in 365 species: Archae - 5; Bacteria - 640; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 232 (source: NCBI BLink). & (reliability: 220.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4408.2","No alias","Porphyridium purpureum","(at5g44000 : 192.0) Glutathione S-transferase family protein; FUNCTIONS IN: glutathione transferase activity; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutathione S-transferase family protein (TAIR:AT4G19880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 384.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_441.28","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4421.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4423.5","No alias","Porphyridium purpureum","(at1g59820 : 382.0) Encodes a phospholipid translocase. Involved in secretory vesicle formation from trans-Golgi in peripheral columella cells at the root tip. Mutants have short primary roots and grow slower.; aminophospholipid ATPase 3 (ALA3); FUNCTIONS IN: phospholipid transporter activity, ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: Golgi vesicle budding, shoot development, root development; LOCATED IN: Golgi apparatus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT1G17500.1); Has 12776 Blast hits to 11290 proteins in 1545 species: Archae - 148; Bacteria - 4231; Metazoa - 2905; Fungi - 2108; Plants - 937; Viruses - 1; Other Eukaryotes - 2446 (source: NCBI BLink). & (q2ras0|aca5_orysa : 96.7) Probable calcium-transporting ATPase 5, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 5) - Oryza sativa (Rice) & (reliability: 718.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4423.7","No alias","Porphyridium purpureum","(o22437|chld_pea : 332.0) Magnesium-chelatase subunit chlD, chloroplast precursor (EC 6.6.1.1) (Mg-protoporphyrin IX chelatase) (Mg-chelatase subunit D) - Pisum sativum (Garden pea) & (at1g08520 : 321.0) Encodes the CHLD subunit of the Mg-chelatase enzyme involved in chlorophyll biosynthesis. Lines carrying recessive mutations of this locus are white and seedling lethal.; ALBINA 1 (ALB1); FUNCTIONS IN: magnesium chelatase activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: chlorophyll biosynthetic process; LOCATED IN: magnesium chelatase complex, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Magnesium chelatase, ChlI subunit (InterPro:IPR000523), Magnesium chelatase, ATPase subunit D (InterPro:IPR011776), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G18480.1); Has 11508 Blast hits to 8193 proteins in 1580 species: Archae - 212; Bacteria - 4110; Metazoa - 3314; Fungi - 479; Plants - 476; Viruses - 191; Other Eukaryotes - 2726 (source: NCBI BLink). & (reliability: 642.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4425.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4437.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4438.21","No alias","Porphyridium purpureum","(at2g39970 : 173.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding; INVOLVED IN: transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, peroxisomal membrane, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: folate transporter 1 (TAIR:AT5G66380.1); Has 16603 Blast hits to 11434 proteins in 397 species: Archae - 0; Bacteria - 4; Metazoa - 7348; Fungi - 4678; Plants - 2931; Viruses - 0; Other Eukaryotes - 1642 (source: NCBI BLink). & (reliability: 346.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_444.30","No alias","Porphyridium purpureum","(at2g26000 : 191.0) BRAP2 RING ZnF UBP domain-containing protein 2 (BRIZ2); FUNCTIONS IN: catalytic activity, zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: BRCA1-associated 2 (InterPro:IPR011422), Zinc finger, UBP-type (InterPro:IPR001607), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: zinc finger (ubiquitin-hydrolase) domain-containing protein (TAIR:AT2G42160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 382.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4446.6","No alias","Porphyridium purpureum","(at1g63610 : 131.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G14910.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 262.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4455.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4456.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4456.7","No alias","Porphyridium purpureum","(at4g13550 : 89.0) triglyceride lipases;triglyceride lipases; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G18640.1); Has 2190 Blast hits to 2187 proteins in 383 species: Archae - 0; Bacteria - 476; Metazoa - 135; Fungi - 440; Plants - 705; Viruses - 12; Other Eukaryotes - 422 (source: NCBI BLink). & (reliability: 178.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4458.7","No alias","Porphyridium purpureum","(at1g55460 : 126.0) DNA/RNA-binding protein Kin17, conserved region; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), DNA/RNA-binding protein Kin17, conserved region (InterPro:IPR019447), KOW (InterPro:IPR005824); BEST Arabidopsis thaliana protein match is: DNA/RNA-binding protein Kin17, conserved region (TAIR:AT5G51795.1); Has 1885 Blast hits to 1561 proteins in 251 species: Archae - 4; Bacteria - 25; Metazoa - 715; Fungi - 242; Plants - 160; Viruses - 13; Other Eukaryotes - 726 (source: NCBI BLink). & (reliability: 252.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4458.9","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4461.4","No alias","Porphyridium purpureum","(at3g25040 : 227.0) Encodes ERD2b. a homolog of the yeast endoplasmic reticulum retention receptor ERD2.  Mutations in ERD2b compromise EFR but not FLS2 signaling.; endoplasmic reticulum retention defective 2B (ERD2B); FUNCTIONS IN: ER retention sequence binding, receptor activity; INVOLVED IN: defense response signaling pathway, resistance gene-independent, protein transport; LOCATED IN: integral to membrane, Golgi apparatus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ER lumen protein retaining receptor (InterPro:IPR000133); BEST Arabidopsis thaliana protein match is: ER lumen protein retaining receptor family protein (TAIR:AT1G29330.1); Has 912 Blast hits to 910 proteins in 230 species: Archae - 0; Bacteria - 0; Metazoa - 322; Fungi - 187; Plants - 229; Viruses - 0; Other Eukaryotes - 174 (source: NCBI BLink). & (q9ztn2|erd2_pethy : 221.0) ER lumen protein retaining receptor (HDEL receptor) (PGP169-12) - Petunia hybrida (Petunia) & (reliability: 454.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4461.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4467.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4476.15","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4478.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_448.16","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_448.22","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_448.4","No alias","Porphyridium purpureum","(at5g08420 : 325.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087); Has 2263 Blast hits to 1799 proteins in 332 species: Archae - 149; Bacteria - 48; Metazoa - 634; Fungi - 309; Plants - 96; Viruses - 0; Other Eukaryotes - 1027 (source: NCBI BLink). & (reliability: 650.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_448.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4487.6","No alias","Porphyridium purpureum","(at3g50530 : 187.0) CDPK-related kinase; CDPK-related kinase (CRK); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: CDPK-related kinase 1 (TAIR:AT2G41140.1). & (p53681|crk_dauca : 185.0) CDPK-related protein kinase (EC 2.7.11.1) (PK421) - Daucus carota (Carrot) & (reliability: 374.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_450.3","No alias","Porphyridium purpureum","(at3g62310 : 264.0) RNA helicase family protein; FUNCTIONS IN: RNA helicase activity, helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase family protein (TAIR:AT2G47250.1); Has 10517 Blast hits to 9531 proteins in 1639 species: Archae - 4; Bacteria - 3473; Metazoa - 2472; Fungi - 1291; Plants - 883; Viruses - 640; Other Eukaryotes - 1754 (source: NCBI BLink). & (gnl|cdd|68872 : 106.0) no description available & (reliability: 520.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4500.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4501.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4522.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_454.22","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4545.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_457.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_465.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_471.2","No alias","Porphyridium purpureum","(at3g11945 : 266.0) Encodes a protein involved in plastoquinone-9 biosynthesis. The enzyme possesses homogentisate prenyltransferase activity and was shown to use solanesyl diphosphate, farnesyl diphosphate and geranylgeranyldiphosphate as prenyl donors, but not phytyldiphosphate.  This gene At3g11945 derives from a split of At3g11950, publications Tian et al (2007) and Sadre et al (2006) refer to this gene as At3g11950.; homogentisate prenyltransferase (HST); CONTAINS InterPro DOMAIN/s: UbiA prenyltransferase (InterPro:IPR000537); BEST Arabidopsis thaliana protein match is: homogentisate phytyltransferase 1 (TAIR:AT2G18950.1); Has 1367 Blast hits to 1364 proteins in 371 species: Archae - 252; Bacteria - 598; Metazoa - 1; Fungi - 4; Plants - 199; Viruses - 0; Other Eukaryotes - 313 (source: NCBI BLink). & (reliability: 532.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_474.1","No alias","Porphyridium purpureum","(at3g56690 : 117.0) encodes a protein similar to ATPases and binds to calmodulin in vitro. This is a single-copy gene and is expressed in all tissues examined.; Cam interacting protein 111 (CIP111); FUNCTIONS IN: ATPase activity, calmodulin binding; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein (TAIR:AT5G03340.1); Has 63578 Blast hits to 32942 proteins in 3240 species: Archae - 2541; Bacteria - 24762; Metazoa - 9322; Fungi - 6853; Plants - 5967; Viruses - 72; Other Eukaryotes - 14061 (source: NCBI BLink). & (p54774|cdc48_soybn : 110.0) Cell division cycle protein 48 homolog (Valosin-containing protein homolog) (VCP) - Glycine max (Soybean) & (reliability: 234.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_474.5","No alias","Porphyridium purpureum","(at5g35980 : 192.0) yeast YAK1-related gene 1 (YAK1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G17750.1); Has 91682 Blast hits to 90157 proteins in 2771 species: Archae - 99; Bacteria - 7981; Metazoa - 36897; Fungi - 11192; Plants - 18283; Viruses - 359; Other Eukaryotes - 16871 (source: NCBI BLink). & (q5z9j0|mpk12_orysa : 109.0) Mitogen-activated protein kinase 12 (EC 2.7.11.24) (MAP kinase 12) (OsBWMK1) (Blast- and wound-induced MAP kinase 1) (MAP kinase 1) (OsMAPK1) - Oryza sativa (Rice) & (reliability: 384.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_484.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_488.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_490.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_494.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_497.6","No alias","Porphyridium purpureum","(at3g02060 : 382.0) DEAD/DEAH box helicase, putative; FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA repair, regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription-repair-coupling factor (InterPro:IPR005118), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Transcription factor CarD (InterPro:IPR003711), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box RNA helicase family protein  (TAIR:AT2G01440.1); Has 31156 Blast hits to 30938 proteins in 2896 species: Archae - 262; Bacteria - 19852; Metazoa - 1548; Fungi - 988; Plants - 649; Viruses - 13; Other Eukaryotes - 7844 (source: NCBI BLink). & (reliability: 764.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_497.7","No alias","Porphyridium purpureum","(at1g09300 : 224.0) Metallopeptidase M24 family protein; FUNCTIONS IN: metallopeptidase activity, manganese ion binding, metalloexopeptidase activity, aminopeptidase activity; INVOLVED IN: proteolysis, cellular process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M24B, X-Pro dipeptidase/aminopeptidase P  N-terminal (InterPro:IPR007865), Peptidase M24, structural domain (InterPro:IPR000994), Peptidase M24, methionine aminopeptidase (InterPro:IPR001714); BEST Arabidopsis thaliana protein match is: Metallopeptidase M24 family protein (TAIR:AT4G29490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 448.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_499.3","No alias","Porphyridium purpureum","(at1g62750 : 175.0) Nuclear encoded protein consists of the five domains conserved in EF-G proteins, with two GTP-binding sites in the first domain, and an additional transit peptide at the N-terminus. Localized in chloroplasts. Point mutation results in a delay in the onset of germination. At early developmental stage embryos still contain undifferentiated proplastids. The greening of cotyledons is severely impaired in light-grown mutant sco1 seedlings, whereas the following true leaves develop normally as in wild-type plants.; SNOWY COTYLEDON 1 (SCO1); FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, translation elongation factor activity, ATP binding; INVOLVED IN: post-embryonic development, chloroplast organization, seed germination; LOCATED IN: mitochondrion, apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation factor EFG/EF2, domain IV (InterPro:IPR005517), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFG/EF2 (InterPro:IPR004540), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EFG/EF2 protein (TAIR:AT2G45030.1); Has 79823 Blast hits to 67706 proteins in 7071 species: Archae - 929; Bacteria - 47320; Metazoa - 4453; Fungi - 5428; Plants - 1613; Viruses - 3; Other Eukaryotes - 20077 (source: NCBI BLink). & (p34811|efgc_soybn : 175.0) Elongation factor G, chloroplast precursor (EF-G) - Glycine max (Soybean) & (reliability: 350.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_503.12","No alias","Porphyridium purpureum","(at1g50250 : 579.0) encodes an FTSH protease that is localized to the chloroplast. Involved in the D1 repair cycle of Photosystem II. FtsH1 and FtsH5 are interchangeable in thylakoid membranes.; FTSH protease 1 (FTSH1); FUNCTIONS IN: metallopeptidase activity, protein binding, ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: photosystem II repair, PSII associated light-harvesting complex II catabolic process; LOCATED IN: thylakoid lumen, chloroplast thylakoid membrane, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642); BEST Arabidopsis thaliana protein match is: FtsH extracellular protease family (TAIR:AT5G42270.1); Has 39789 Blast hits to 37355 proteins in 3308 species: Archae - 1512; Bacteria - 16133; Metazoa - 4957; Fungi - 3666; Plants - 3305; Viruses - 34; Other Eukaryotes - 10182 (source: NCBI BLink). & (q5z974|ftsh_orysa : 578.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Oryza sativa (Rice) & (reliability: 1158.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_504.13","No alias","Porphyridium purpureum","(at3g26070 : 99.8) Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, plastoglobule; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); BEST Arabidopsis thaliana protein match is: plastid-lipid associated protein PAP / fibrillin family protein (TAIR:AT3G26080.1); Has 483 Blast hits to 479 proteins in 86 species: Archae - 0; Bacteria - 99; Metazoa - 0; Fungi - 0; Plants - 334; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (reliability: 199.6) &  (original description: no original description)","protein_coding"
"evm.model.contig_509.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_510.21","No alias","Porphyridium purpureum","(at2g17570 : 171.0) Undecaprenyl pyrophosphate synthetase family protein; FUNCTIONS IN: transferase activity, transferring alkyl or aryl (other than methyl) groups; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Di-trans-poly-cis-decaprenylcistransferase-like, conserved site (InterPro:IPR018520), Di-trans-poly-cis-decaprenylcistransferase-like (InterPro:IPR001441); BEST Arabidopsis thaliana protein match is: Undecaprenyl pyrophosphate synthetase family protein (TAIR:AT5G60510.1); Has 9017 Blast hits to 8995 proteins in 2779 species: Archae - 230; Bacteria - 5298; Metazoa - 197; Fungi - 223; Plants - 211; Viruses - 0; Other Eukaryotes - 2858 (source: NCBI BLink). & (reliability: 342.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_518.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_527.18","No alias","Porphyridium purpureum","(at2g28840 : 92.4) XB3 ortholog 1 in Arabidopsis thaliana (XBAT31); FUNCTIONS IN: zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 ortholog 3 in Arabidopsis thaliana (TAIR:AT5G07270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q8vyx2|akt1_orysa : 88.6) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (reliability: 177.2) &  (original description: no original description)","protein_coding"
"evm.model.contig_527.21","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_527.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_538.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_538.7","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding"
"evm.model.contig_538.8","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_542.15","No alias","Porphyridium purpureum","(at4g27650 : 352.0) Encodes Arabidopsis homolog of Drosophila pelota protein.; PELOTA (PEL1); FUNCTIONS IN: translation release factor activity; INVOLVED IN: meiosis, translational termination, translation; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: eRF1 domain 2 (InterPro:IPR005141), eRF1 domain 3 (InterPro:IPR005142), eRF1 domain 1 (InterPro:IPR005140), Probable translation factor pelota (InterPro:IPR004405); BEST Arabidopsis thaliana protein match is: Eukaryotic release factor 1 (eRF1) family protein (TAIR:AT3G58390.1); Has 776 Blast hits to 774 proteins in 323 species: Archae - 255; Bacteria - 0; Metazoa - 140; Fungi - 159; Plants - 51; Viruses - 1; Other Eukaryotes - 170 (source: NCBI BLink). & (reliability: 704.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_542.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_544.4","No alias","Porphyridium purpureum","(at1g28060 : 160.0) Pre-mRNA-splicing factor 3; CONTAINS InterPro DOMAIN/s: Pre-mRNA-splicing factor 3 (InterPro:IPR013881); BEST Arabidopsis thaliana protein match is: Pre-mRNA-splicing factor 3 (TAIR:AT3G55930.1); Has 22923 Blast hits to 12760 proteins in 707 species: Archae - 18; Bacteria - 1085; Metazoa - 11525; Fungi - 3053; Plants - 1999; Viruses - 93; Other Eukaryotes - 5150 (source: NCBI BLink). & (reliability: 320.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_545.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_545.11","No alias","Porphyridium purpureum","(at3g56840 : 168.0) FAD-dependent oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAD dependent oxidoreductase (InterPro:IPR006076); Has 4748 Blast hits to 4741 proteins in 1463 species: Archae - 76; Bacteria - 3210; Metazoa - 112; Fungi - 136; Plants - 47; Viruses - 1; Other Eukaryotes - 1166 (source: NCBI BLink). & (reliability: 336.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_559.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_560.2","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding"
"evm.model.contig_565.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_592.1","No alias","Porphyridium purpureum","(at4g13550 : 86.3) triglyceride lipases;triglyceride lipases; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G18640.1); Has 2190 Blast hits to 2187 proteins in 383 species: Archae - 0; Bacteria - 476; Metazoa - 135; Fungi - 440; Plants - 705; Viruses - 12; Other Eukaryotes - 422 (source: NCBI BLink). & (reliability: 172.6) &  (original description: no original description)","protein_coding"
"evm.model.contig_594.2","No alias","Porphyridium purpureum","(at2g34630 : 189.0) Encodes a geranyl diphosphate synthase. RNAi lines are dwarf. T-DNA knock-out lines are embryo lethal.; geranyl diphosphate synthase 1 (GPS1); CONTAINS InterPro DOMAIN/s: Polyprenyl synthetase-related (InterPro:IPR017446), Terpenoid synthase (InterPro:IPR008949), Polyprenyl synthetase (InterPro:IPR000092); BEST Arabidopsis thaliana protein match is: solanesyl diphosphate synthase 2 (TAIR:AT1G17050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 378.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_596.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_602.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_604.6","No alias","Porphyridium purpureum","(q9g4f5|cysa_cucsa : 114.0) Sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) (Sulfate-transporting ATPase) - Cucumis sativus (Cucumber) & (at1g65410 : 108.0) Encodes a member of NAP subfamily of transporters.  Mutations in this gene suppress the low temperature-induced phenotype of Arabidopsis tocopherol-deficient mutant vte2.; non-intrinsic ABC protein 11 (NAP11); FUNCTIONS IN: transporter activity, ATPase activity; INVOLVED IN: lipid transport; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: non-intrinsic ABC protein 3 (TAIR:AT1G67940.1); Has 424474 Blast hits to 380294 proteins in 4085 species: Archae - 7338; Bacteria - 330543; Metazoa - 9238; Fungi - 6335; Plants - 5254; Viruses - 18; Other Eukaryotes - 65748 (source: NCBI BLink). & (reliability: 216.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_606.7","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_623.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_623.9","No alias","Porphyridium purpureum","(at1g08860 : 232.0) Encodes a copine-like protein, which is a member of a newly identified class of calcium-dependent, phospholipid binding proteins that are present in a wide range of organisms. Overexpression of this gene suppresses bon1-1 phenotypes. Double mutant analyses with bon1-1 suggest that BON1 and BON3 have overlapping functions in maintaining cellular homeostasis and inhibiting cell death.; BONZAI 3 (BON3); FUNCTIONS IN: calcium-dependent phospholipid binding; INVOLVED IN: N-terminal protein myristoylation, cellular homeostasis, positive regulation of cellular defense response, negative regulation of cell death; EXPRESSED IN: sperm cell, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Copine (InterPro:IPR010734), C2 calcium-dependent membrane targeting (InterPro:IPR000008), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT5G61910.4); Has 1559 Blast hits to 1479 proteins in 107 species: Archae - 0; Bacteria - 0; Metazoa - 903; Fungi - 12; Plants - 319; Viruses - 0; Other Eukaryotes - 325 (source: NCBI BLink). & (reliability: 464.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_659.1","No alias","Porphyridium purpureum","(at5g57040 : 125.0) Lactoylglutathione lyase / glyoxalase I family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360); BEST Arabidopsis thaliana protein match is: Lactoylglutathione lyase / glyoxalase I family protein (TAIR:AT1G80160.1); Has 1348 Blast hits to 1348 proteins in 501 species: Archae - 0; Bacteria - 1093; Metazoa - 6; Fungi - 0; Plants - 176; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (reliability: 250.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_667.6","No alias","Porphyridium purpureum","(at1g09760 : 110.0) U2 small nuclear ribonucleoprotein A (U2A'); INVOLVED IN: nuclear mRNA splicing, via spliceosome, response to cold; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: U2A'/phosphoprotein 32 family A, C-terminal (InterPro:IPR003603); Has 8109 Blast hits to 6297 proteins in 450 species: Archae - 0; Bacteria - 3635; Metazoa - 3194; Fungi - 303; Plants - 219; Viruses - 2; Other Eukaryotes - 756 (source: NCBI BLink). & (reliability: 220.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_676.1","No alias","Porphyridium purpureum","(at5g39440 : 165.0) SNF1-related protein kinase 1.3 (SnRK1.3); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Kinase-associated KA1 (InterPro:IPR001772), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Protein kinase, Snf1-like AMPK (InterPro:IPR015741), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: SNF1 kinase homolog 11 (TAIR:AT3G29160.2); Has 134559 Blast hits to 132128 proteins in 4775 species: Archae - 156; Bacteria - 15425; Metazoa - 49691; Fungi - 13625; Plants - 32691; Viruses - 538; Other Eukaryotes - 22433 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 155.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 330.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_724.7","No alias","Porphyridium purpureum","(at1g14790 : 350.0) Encodes RNA-dependent RNA polymerase.   While not required for virus-induced post-transcriptional gene silencing (PTGS), it can promote turnover of viral RNAs in infected plants. Nomenclature according to Xie, et al. (2004). Involved in the production of Cucumber Mosaic Virus siRNAs.; RNA-dependent RNA polymerase 1 (RDR1); CONTAINS InterPro DOMAIN/s: RNA-dependent RNA polymerase, eukaryotic-type (InterPro:IPR007855); BEST Arabidopsis thaliana protein match is: RNA-dependent RNA polymerase 2 (TAIR:AT4G11130.1); Has 638 Blast hits to 623 proteins in 115 species: Archae - 0; Bacteria - 2; Metazoa - 73; Fungi - 286; Plants - 205; Viruses - 2; Other Eukaryotes - 70 (source: NCBI BLink). & (reliability: 700.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_753.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_757.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_765.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_779.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_814.1","No alias","Porphyridium purpureum","(at5g27660 : 177.0) Trypsin family protein with PDZ domain; FUNCTIONS IN: serine-type peptidase activity, catalytic activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), Peptidase S1C, HrtA/DegP2/Q/S (InterPro:IPR001940), Peptidase S1/S6, chymotrypsin/Hap (InterPro:IPR001254), PDZ/DHR/GLGF (InterPro:IPR001478); BEST Arabidopsis thaliana protein match is: DegP protease 1 (TAIR:AT3G27925.1); Has 16463 Blast hits to 16423 proteins in 2614 species: Archae - 115; Bacteria - 10782; Metazoa - 377; Fungi - 151; Plants - 529; Viruses - 0; Other Eukaryotes - 4509 (source: NCBI BLink). & (reliability: 354.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_856.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_865.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000025.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000042.131","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000042.136","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000057.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000076.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000076.75","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000113.28","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000135.2","No alias","Cyanophora paradoxa","(at2g45990 : 133.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 266.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000144.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000144.149","No alias","Cyanophora paradoxa","(at4g04950 : 143.0) thioredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336), Glutaredoxin-related protein (InterPro:IPR004480); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT4G32580.1); Has 26535 Blast hits to 17137 proteins in 2757 species: Archae - 249; Bacteria - 14010; Metazoa - 1647; Fungi - 1426; Plants - 1759; Viruses - 3; Other Eukaryotes - 7441 (source: NCBI BLink). & (reliability: 286.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000144.65","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000144.83","No alias","Cyanophora paradoxa","(at2g29630 : 782.0) thiaminC (THIC); CONTAINS InterPro DOMAIN/s: Thiamine biosynthesis protein ThiC (InterPro:IPR002817). & (reliability: 1564.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000197.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000203.16","No alias","Cyanophora paradoxa","(at3g18140 : 236.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G22040.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 472.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000204.88","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000227.6","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000237.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000241.176","No alias","Cyanophora paradoxa","(at1g75660 : 219.0) Encodes a protein with similarity to yeast 5'-3'exonucleases and can functionally complement the yeast mutations. In Arabidopsis XRN3 acts as a suppressor of posttranscriptional gene silencing. Mutants accumulate excised miRNA products suggesting that XRN3 is involved in degradation of these products.; 5'-3' exoribonuclease 3 (XRN3); CONTAINS InterPro DOMAIN/s: 5'-3' exoribonuclease 2 (InterPro:IPR017151), Zinc finger, CCHC-type (InterPro:IPR001878), Putative 5-3 exonuclease (InterPro:IPR004859); BEST Arabidopsis thaliana protein match is: exoribonuclease 2 (TAIR:AT5G42540.1); Has 4264 Blast hits to 3505 proteins in 442 species: Archae - 2; Bacteria - 295; Metazoa - 1361; Fungi - 725; Plants - 751; Viruses - 31; Other Eukaryotes - 1099 (source: NCBI BLink). & (reliability: 438.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000262.28","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000319.20","No alias","Cyanophora paradoxa","(at1g73660 : 122.0) Encodes a protein with similarity to MAPKKKs. May function as a negative regulator of salt tolerance.; protein tyrosine kinase family protein; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Ubiquitin interacting motif (InterPro:IPR003903), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G18160.1); Has 126827 Blast hits to 124278 proteins in 4857 species: Archae - 98; Bacteria - 13376; Metazoa - 48156; Fungi - 11388; Plants - 33654; Viruses - 503; Other Eukaryotes - 19652 (source: NCBI BLink). & (reliability: 244.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000342.46","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000350.31","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000367.44","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000378.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000402.16","No alias","Cyanophora paradoxa","(at1g55310 : 108.0) Encodes a SR spliceosome protein that is localized to nuclear specks, interacts with SR45 and the U1-70K protein of the U1 snRNP, has sequence similar to human SC35 protein.; SC35-like splicing factor 33 (SR33); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: SC35-like splicing factor 30A (TAIR:AT3G13570.1). & (reliability: 216.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000402.35","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000402.47","No alias","Cyanophora paradoxa","(at3g62030 : 213.0) nuclear-encoded chloroplast stromal cyclophilin CYP20-3 (also known as ROC4). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.; rotamase CYP 4 (ROC4); CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: cyclophilin 20-2 (TAIR:AT5G13120.1). & (q41651|cypb_vicfa : 199.0) Peptidyl-prolyl cis-trans isomerase, chloroplast precursor (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) (CYP B) - Vicia faba (Broad bean) & (reliability: 426.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000404.27","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000404.42","No alias","Cyanophora paradoxa","(at5g40770 : 323.0) prohibitin 3; prohibitin 3 (PHB3); INVOLVED IN: in 8 processes; LOCATED IN: in 6 components; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Prohibitin (InterPro:IPR000163), Band 7 protein (InterPro:IPR001107); BEST Arabidopsis thaliana protein match is: prohibitin 4 (TAIR:AT3G27280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 646.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000444.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000459.18","No alias","Cyanophora paradoxa"," (original description: no original description)","protein_coding"
"evm.model.tig00000478.33","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000498.26","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000498.54","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000507.10","No alias","Cyanophora paradoxa","(at3g10850 : 81.6) glyoxalase II cytoplasmic isozyme (Glx2-2) mRNA, complete; GLY2; FUNCTIONS IN: hydroxyacylglutathione hydrolase activity; INVOLVED IN: methylglyoxal catabolic process to D-lactate; LOCATED IN: endomembrane system, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-lactamase-like (InterPro:IPR001279), Hydroxyacylglutathione hydrolase (InterPro:IPR017782); BEST Arabidopsis thaliana protein match is: glyoxalase 2-4 (TAIR:AT1G06130.2); Has 13211 Blast hits to 13207 proteins in 2289 species: Archae - 256; Bacteria - 8297; Metazoa - 430; Fungi - 311; Plants - 206; Viruses - 0; Other Eukaryotes - 3711 (source: NCBI BLink). & (reliability: 163.2) &  (original description: no original description)","protein_coding"
"evm.model.tig00000545.18","No alias","Cyanophora paradoxa","(at1g64520 : 194.0) regulatory particle non-ATPase 12A (RPN12a); FUNCTIONS IN: peptidase activity; INVOLVED IN: in 14 processes; LOCATED IN: proteasome complex, nucleus, proteasome regulatory particle, lid subcomplex, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 26S proteasome non-ATPase regulatory subunit Rpn12 (InterPro:IPR006746), SAC3/GANP/Nin1/mts3/eIF-3 p25 (InterPro:IPR005062); BEST Arabidopsis thaliana protein match is: regulatory particle non-ATPase 12B (TAIR:AT5G42040.1); Has 474 Blast hits to 474 proteins in 207 species: Archae - 0; Bacteria - 0; Metazoa - 195; Fungi - 129; Plants - 70; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 388.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000553.26","No alias","Cyanophora paradoxa","(at1g17720 : 219.0) type 2A protein serine/threonine phosphatase 55 kDa B; ATB BETA; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Protein phosphatase 2A, regulatory subunit PR55 (InterPro:IPR000009), Protein phosphatase 2A, regulatory subunit PR55, conserved site (InterPro:IPR018067), WD40 repeat, conserved site (InterPro:IPR019775), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform (TAIR:AT1G51690.3); Has 1042 Blast hits to 998 proteins in 278 species: Archae - 0; Bacteria - 71; Metazoa - 509; Fungi - 214; Plants - 122; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink). & (q6z8b7|2abb_orysa : 216.0) Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform (PP2A, subunit B, beta isoform) - Oryza sativa (Rice) & (reliability: 438.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000605.3","No alias","Cyanophora paradoxa","(at4g27420 : 167.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: membrane; EXPRESSED IN: petal, leaf whorl, sepal, flower, egg cell; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 389492 Blast hits to 355855 proteins in 4126 species: Archae - 7031; Bacteria - 309319; Metazoa - 8330; Fungi - 6395; Plants - 5225; Viruses - 7; Other Eukaryotes - 53185 (source: NCBI BLink). & (q5z9s8|pdr12_orysa : 134.0) Pleiotropic drug resistance protein 12 - Oryza sativa (Rice) & (reliability: 334.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000615.75","No alias","Cyanophora paradoxa","(at4g24820 : 445.0) 26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein catabolic process, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome complex, nucleus, plasma membrane, proteasome regulatory particle, lid subcomplex, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717), 26S proteasome, regulatory subunit Rpn7 (InterPro:IPR019585); BEST Arabidopsis thaliana protein match is: 26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain (TAIR:AT3G61140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8w425|psmd6_orysa : 426.0) 26S proteasome non-ATPase regulatory subunit 6 (26S proteasome regulatory particle non-ATPase subunit 7) (OsRPN7) - Oryza sativa (Rice) & (reliability: 890.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000655.36","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000655.63","No alias","Cyanophora paradoxa","(at5g58370 : 142.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding; INVOLVED IN: barrier septum formation; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP-binding protein, HSR1-related (InterPro:IPR002917), GTP-binding protein, ribosome biogenesis,  YsxC (InterPro:IPR019987); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G22870.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 284.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000692.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000692.82","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000704.58","No alias","Cyanophora paradoxa","(at1g62430 : 297.0) Encodes a CDP-diacylglycerol synthase, involved in phospholipid biosynthesis.; CDP-diacylglycerol synthase 1 (CDS1); CONTAINS InterPro DOMAIN/s: Phosphatidate cytidylyltransferase (InterPro:IPR000374), Phosphatidate cytidylyltransferase, eukaryota (InterPro:IPR016720); BEST Arabidopsis thaliana protein match is: cytidinediphosphate diacylglycerol synthase 2 (TAIR:AT4G22340.1); Has 7098 Blast hits to 7086 proteins in 2534 species: Archae - 0; Bacteria - 4982; Metazoa - 186; Fungi - 135; Plants - 138; Viruses - 0; Other Eukaryotes - 1657 (source: NCBI BLink). & (o04940|cds1_soltu : 285.0) Phosphatidate cytidylyltransferase (EC 2.7.7.41) (CDP-diglyceride synthetase) (CDP-diglyceride pyrophosphorylase) (CDP-diacylglycerol synthase) (CDS) (CTP:phosphatidate cytidylyltransferase) (CDP-DAG synthase) (CDP-DG synthetase) - Sola & (reliability: 594.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000718.4","No alias","Cyanophora paradoxa","(at1g73110 : 198.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATPase activity, ATP binding; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959); BEST Arabidopsis thaliana protein match is: rubisco activase (TAIR:AT2G39730.1); Has 469 Blast hits to 469 proteins in 170 species: Archae - 27; Bacteria - 71; Metazoa - 17; Fungi - 60; Plants - 256; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (o64981|rca_phavu : 187.0) Ribulose bisphosphate carboxylase/oxygenase activase, chloroplast precursor (RuBisCO activase) (RA) - Phaseolus vulgaris (Kidney bean) (French bean) & (reliability: 396.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000718.6","No alias","Cyanophora paradoxa","(at1g45000 : 537.0) AAA-type ATPase family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: proteasome complex, plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593); BEST Arabidopsis thaliana protein match is: regulatory particle triple-A ATPase 4A (TAIR:AT5G43010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p46466|prs4_orysa : 293.0) 26S protease regulatory subunit 4 homolog (TAT-binding protein homolog 2) - Oryza sativa (Rice) & (reliability: 1074.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000737.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000741.17","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000741.18","No alias","Cyanophora paradoxa","(at5g25760 : 213.0) mutant displays sucrose-dependent seedling development and reduced lateral root production. PEX4 interacts with PEX22 in a yeast two-hybrid. Necessary for peroxisome biogenesis. The PEX4 and PEX22 pair may be important during the remodeling of peroxisome matrix contents as glyoxysomes transition to leaf peroxisomes.; peroxin4 (PEX4); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 29 (TAIR:AT2G16740.1); Has 10357 Blast hits to 10353 proteins in 397 species: Archae - 0; Bacteria - 2; Metazoa - 4640; Fungi - 2157; Plants - 1900; Viruses - 24; Other Eukaryotes - 1634 (source: NCBI BLink). & (p35130|ubc2_medsa : 111.0) Ubiquitin-conjugating enzyme E2-17 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) - Medicago sativa (Alfalfa) & (reliability: 426.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000767.5","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000789.31","No alias","Cyanophora paradoxa","(at1g79260 : 104.0) CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1794 (InterPro:IPR014878); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 208.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000792.49","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000823.31","No alias","Cyanophora paradoxa","(at3g10400 : 157.0) RNA recognition motif and CCHC-type zinc finger domains containing protein; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Ribonucleoprotein, BRUNO-like (InterPro:IPR015903), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: ortholog of human splicing factor SC35 (TAIR:AT5G64200.2); Has 867 Blast hits to 867 proteins in 310 species: Archae - 0; Bacteria - 0; Metazoa - 452; Fungi - 160; Plants - 158; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). & (reliability: 314.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000826.22","No alias","Cyanophora paradoxa","(q9lst7|psb3_orysa : 263.0) Proteasome subunit beta type 3 (EC 3.4.25.1) (20S proteasome alpha subunit C) (20S proteasome subunit beta-3) - Oryza sativa (Rice) & (at1g21720 : 259.0) 20S proteasome beta subunit PBC1 truncated protein (PBC1); proteasome beta subunit C1 (PBC1); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, beta-type subunit, conserved site (InterPro:IPR016050), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: 20S proteasome beta subunit C2 (TAIR:AT1G77440.2); Has 3309 Blast hits to 3309 proteins in 436 species: Archae - 498; Bacteria - 34; Metazoa - 1257; Fungi - 828; Plants - 282; Viruses - 0; Other Eukaryotes - 410 (source: NCBI BLink). & (reliability: 518.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000829.12","No alias","Cyanophora paradoxa","(at4g37190 : 85.1) LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Misato Segment II, myosin-like (InterPro:IPR019605), Tubulin/FtsZ, N-terminal (InterPro:IPR019746); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 170.2) &  (original description: no original description)","protein_coding"
"evm.model.tig00000842.4","No alias","Cyanophora paradoxa","(at5g66020 : 348.0) Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do.  non-consensus AT donor splice site at exon 7, TA donor splice site at exon 10, AT acceptor splice at exon 13.; SUPPRESSOR OF ACTIN 1B (ATSAC1B); CONTAINS InterPro DOMAIN/s: Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT3G51460.1); Has 1740 Blast hits to 1632 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 569; Fungi - 574; Plants - 290; Viruses - 0; Other Eukaryotes - 307 (source: NCBI BLink). & (reliability: 690.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000842.55","No alias","Cyanophora paradoxa","(at1g20220 : 193.0) Alba DNA/RNA-binding protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alba, DNA/RNA-binding protein (InterPro:IPR002775); BEST Arabidopsis thaliana protein match is: Alba DNA/RNA-binding protein (TAIR:AT1G76010.1); Has 46942 Blast hits to 19054 proteins in 1334 species: Archae - 23; Bacteria - 15382; Metazoa - 15943; Fungi - 3395; Plants - 5072; Viruses - 633; Other Eukaryotes - 6494 (source: NCBI BLink). & (reliability: 386.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000865.61","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000880.19","No alias","Cyanophora paradoxa","(at4g03430 : 278.0) Encodes a nuclear protein similar to the human U5 small ribonucleoprotein-associated 102-kD protein and to the yeast pre-mRNA splicing factors Prp1p and Prp6p. STA1 expression is upregulated by cold stress, and the sta1-1 mutant is defective in the splicing of the cold-induced COR15A gene. Luciferase imaging was used to isolate a recessive mutant, sta1-1, with enhanced stability of the normally unstable luciferase transcript. This mutation also causes the stabilization of some endogenous gene transcripts and has a range of developmental and stress response phenotypes.; EMBRYO DEFECTIVE 2770 (EMB2770); FUNCTIONS IN: binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome, response to cold, response to abiotic stimulus; LOCATED IN: nucleus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix (InterPro:IPR003107), Tetratricopeptide-like helical (InterPro:IPR011990), PRP1 splicing factor, N-terminal (InterPro:IPR010491), Ubiquitin supergroup (InterPro:IPR019955), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: beta-galactosidase 14 (TAIR:AT4G38590.1); Has 3874 Blast hits to 2098 proteins in 386 species: Archae - 98; Bacteria - 366; Metazoa - 1194; Fungi - 916; Plants - 656; Viruses - 0; Other Eukaryotes - 644 (source: NCBI BLink). & (reliability: 556.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000881.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000912.20","No alias","Cyanophora paradoxa","(at2g31260 : 341.0) Involved in autophagy, the process of vacuolar bulk degradation of cytoplasmic components.  Mutant shows accelerated bolting and senescence.; autophagy 9 (APG9); CONTAINS InterPro DOMAIN/s: Autophagy-related protein 9 (InterPro:IPR007241); Has 489 Blast hits to 477 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 214; Fungi - 166; Plants - 51; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 682.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000944.2","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000944.32","No alias","Cyanophora paradoxa","(at5g67530 : 121.0) plant U-box 49 (PUB49); FUNCTIONS IN: ubiquitin-protein ligase activity, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding, protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), U box domain (InterPro:IPR003613), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT1G01940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 242.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000970.27","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000970.32","No alias","Cyanophora paradoxa","(p35017|sodm_hevbr : 268.0) Superoxide dismutase [Mn], mitochondrial precursor (EC 1.15.1.1) - Hevea brasiliensis (Para rubber tree) & (at3g10920 : 265.0) manganese superoxide dismutase (MSD1); manganese superoxide dismutase 1 (MSD1); FUNCTIONS IN: superoxide dismutase activity, copper ion binding, metal ion binding; INVOLVED IN: response to zinc ion, response to salt stress, defense response to bacterium, removal of superoxide radicals, embryo development ending in seed dormancy; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Manganese/iron superoxide dismutase, N-terminal (InterPro:IPR019831), Manganese/iron superoxide dismutase (InterPro:IPR001189), Manganese/iron superoxide dismutase, C-terminal (InterPro:IPR019832), Manganese/iron superoxide dismutase, binding site (InterPro:IPR019833); BEST Arabidopsis thaliana protein match is: Iron/manganese superoxide dismutase family protein (TAIR:AT3G56350.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 530.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001003.6","No alias","Cyanophora paradoxa","(at1g71270 : 429.0) Encodes a homolog of the yeast Vps52p/SAC2.  Involved in pollen tube germination and growth. Located in multiple endomembrane organelles including the golgi. The yeast protein has been shown to be located at the late Golgi and to function in a complex involved in retrograde trafficking of vesicles between the early endosomal compartment and the trans-Golgi network.; POKY POLLEN TUBE (POK); CONTAINS InterPro DOMAIN/s: Vps52/Sac2 (InterPro:IPR007258); BEST Arabidopsis thaliana protein match is: Vps52 / Sac2 family  (TAIR:AT1G71300.1); Has 820 Blast hits to 773 proteins in 240 species: Archae - 10; Bacteria - 70; Metazoa - 261; Fungi - 156; Plants - 82; Viruses - 2; Other Eukaryotes - 239 (source: NCBI BLink). & (reliability: 858.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001029.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001030.23","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001042.6","No alias","Cyanophora paradoxa","(at4g29040 : 713.0) 26S proteasome AAA-ATPase subunit RPT2a (RPT2a) mRNA,; regulatory particle AAA-ATPase 2A (RPT2a); FUNCTIONS IN: ATPase activity; INVOLVED IN: in 17 processes; LOCATED IN: proteasome regulatory particle, base subcomplex, proteasome complex, nucleus, membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), 26S proteasome subunit P45 (InterPro:IPR005937); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT2G20140.1); Has 31112 Blast hits to 28760 proteins in 3112 species: Archae - 1431; Bacteria - 10308; Metazoa - 4877; Fungi - 3744; Plants - 3214; Viruses - 41; Other Eukaryotes - 7497 (source: NCBI BLink). & (p46466|prs4_orysa : 696.0) 26S protease regulatory subunit 4 homolog (TAT-binding protein homolog 2) - Oryza sativa (Rice) & (reliability: 1426.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001093.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001126.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001155.28","No alias","Cyanophora paradoxa","(at3g01320 : 124.0) Encodes SIN3-like 1, a homolog of the transcriptional repressor SIN3 (AT1G24190).; SIN3-like 1 (SNL1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histone deacetylase interacting (InterPro:IPR013194), Paired amphipathic helix (InterPro:IPR003822); BEST Arabidopsis thaliana protein match is: SIN3-like 2 (TAIR:AT5G15020.2). & (reliability: 248.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001229.23","No alias","Cyanophora paradoxa","(at1g80350 : 151.0) encodes a p60 katanin protein that is expressed throughout  the plant.  Required for the specification of cell fates from early in development (in the meristem)  through differentiation and for normal postmitotic organization of cortical microtubules into transverse arrays in root epidermis cells. Mutants display cytoskeletal defects.; ECTOPIC ROOT HAIR 3 (ERH3); FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: trichome branching, cortical microtubule organization, multidimensional cell growth, plant-type cell wall biogenesis, microtubule cytoskeleton organization; LOCATED IN: katanin complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960), Vps4 oligomerisation, C-terminal (InterPro:IPR015415); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G34560.1); Has 31677 Blast hits to 29370 proteins in 3124 species: Archae - 1478; Bacteria - 12054; Metazoa - 4742; Fungi - 3292; Plants - 2928; Viruses - 23; Other Eukaryotes - 7160 (source: NCBI BLink). & (reliability: 302.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001234.12","No alias","Cyanophora paradoxa","(at4g17760 : 106.0) damaged DNA binding;exodeoxyribonuclease IIIs; FUNCTIONS IN: damaged DNA binding, exodeoxyribonuclease III activity; INVOLVED IN: DNA repair; LOCATED IN: nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Repair protein Rad1/Rec1 (InterPro:IPR003021); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 212.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001269.5","No alias","Cyanophora paradoxa","(at2g17440 : 100.0) Encodes PIRL5, a member of the Plant Intracellular Ras-group-related LRRs (Leucine rich repeat proteins). PIRLs are a distinct, plant-specific class of intracellular LRRs that likely mediate protein interactions, possibly in the context of signal transduction.; plant intracellular ras group-related LRR 5 (PIRL5); LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: plant intracellular ras group-related LRR 4 (TAIR:AT4G35470.1); Has 100264 Blast hits to 38283 proteins in 1358 species: Archae - 22; Bacteria - 10106; Metazoa - 37622; Fungi - 3439; Plants - 42778; Viruses - 28; Other Eukaryotes - 6269 (source: NCBI BLink). & (reliability: 188.8) &  (original description: no original description)","protein_coding"
"evm.model.tig00001286.3","No alias","Cyanophora paradoxa","(at1g65540 : 284.0) LETM1-like protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), LETM1-like (InterPro:IPR011685); BEST Arabidopsis thaliana protein match is: LETM1-like protein (TAIR:AT3G59820.1); Has 7253 Blast hits to 6279 proteins in 764 species: Archae - 76; Bacteria - 1084; Metazoa - 3311; Fungi - 589; Plants - 471; Viruses - 24; Other Eukaryotes - 1698 (source: NCBI BLink). & (reliability: 568.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001302.7","No alias","Cyanophora paradoxa","(at4g15940 : 226.0) Fumarylacetoacetate (FAA) hydrolase family; FUNCTIONS IN: copper ion binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Fumarylacetoacetase, C-terminal-like (InterPro:IPR002529), Fumarylacetoacetase, C-terminal-related (InterPro:IPR011234); BEST Arabidopsis thaliana protein match is: Fumarylacetoacetate (FAA) hydrolase family (TAIR:AT3G16700.1); Has 10822 Blast hits to 10670 proteins in 1907 species: Archae - 249; Bacteria - 6730; Metazoa - 306; Fungi - 435; Plants - 75; Viruses - 0; Other Eukaryotes - 3027 (source: NCBI BLink). & (reliability: 452.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001331.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001339.3","No alias","Cyanophora paradoxa","(p46870|klp1_chlre : 257.0) Kinesin-like protein KLP1 - Chlamydomonas reinhardtii & (at2g28620 : 205.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G45850.2); Has 49289 Blast hits to 35260 proteins in 1950 species: Archae - 481; Bacteria - 7561; Metazoa - 22029; Fungi - 4505; Plants - 3473; Viruses - 125; Other Eukaryotes - 11115 (source: NCBI BLink). & (reliability: 410.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001343.2","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001371.8","No alias","Cyanophora paradoxa","(at3g11830 : 686.0) TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: unfolded protein binding, ATP binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chaperone, tailless complex polypeptide 1 (InterPro:IPR017998), Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), T-complex protein 1, eta subunit (InterPro:IPR012720), Chaperonin TCP-1, conserved site (InterPro:IPR002194); BEST Arabidopsis thaliana protein match is: T-complex protein 1 alpha subunit (TAIR:AT3G20050.1). & (p40412|tcpe1_avesa : 226.0) T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) (TCP-K19) - Avena sativa (Oat) & (reliability: 1372.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001374.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001376.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001415.15","No alias","Cyanophora paradoxa","(at2g44610 : 100.0) Encodes a GTP-binding protein with similarity to yeast YPT6 . RAB6 can complement the yeast YTP mutant.; RAB6A; FUNCTIONS IN: protein binding, GTP binding; INVOLVED IN: secretion by cell; LOCATED IN: plasma membrane, membrane fraction; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab6-related (InterPro:IPR015600); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog H1E (TAIR:AT5G10260.1); Has 26612 Blast hits to 26583 proteins in 727 species: Archae - 21; Bacteria - 159; Metazoa - 14143; Fungi - 3598; Plants - 2938; Viruses - 20; Other Eukaryotes - 5733 (source: NCBI BLink). & (p36861|yptv2_volca : 97.1) GTP-binding protein yptV2 - Volvox carteri & (reliability: 200.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001428.13","No alias","Cyanophora paradoxa","(at4g27490 : 147.0) 3'-5'-exoribonuclease family protein; FUNCTIONS IN: 3'-5'-exoribonuclease activity, RNA binding; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Exoribonuclease, phosphorolytic domain 2 (InterPro:IPR015847), Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); BEST Arabidopsis thaliana protein match is: 3'-5'-exoribonuclease family protein (TAIR:AT3G61620.2); Has 6020 Blast hits to 6020 proteins in 1904 species: Archae - 333; Bacteria - 3622; Metazoa - 423; Fungi - 273; Plants - 197; Viruses - 0; Other Eukaryotes - 1172 (source: NCBI BLink). & (reliability: 294.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001466.9","No alias","Cyanophora paradoxa","(o24362|psa3_spiol : 336.0) Proteasome subunit alpha type 3 (EC 3.4.25.1) (20S proteasome alpha subunit G) (20S proteasome subunit alpha-7) (Proteasome component C8) - Spinacia oleracea (Spinach) & (at2g27020 : 332.0) Encodes 20S proteasome alpha 7 subunit PAG1.; 20S proteasome alpha subunit G1 (PAG1); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: response to cadmium ion, response to cold, ubiquitin-dependent protein catabolic process; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: 20S proteasome alpha subunit E2 (TAIR:AT3G14290.1); Has 5862 Blast hits to 5858 proteins in 463 species: Archae - 870; Bacteria - 9; Metazoa - 1980; Fungi - 1345; Plants - 774; Viruses - 0; Other Eukaryotes - 884 (source: NCBI BLink). & (reliability: 664.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001590.7","No alias","Cyanophora paradoxa","(at3g05480 : 87.4) Involved in the regulation of DNA damage repair and homologous recombination.; RAD9; CONTAINS InterPro DOMAIN/s: Rad9 (InterPro:IPR007268), Cell cycle checkpoint, RAD9 (InterPro:IPR016552). & (reliability: 174.8) &  (original description: no original description)","protein_coding"
"evm.model.tig00001600.13","No alias","Cyanophora paradoxa","(at4g11330 : 367.0) MAP kinase; MAP kinase 5 (MPK5); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), JNK MAP kinase (InterPro:IPR008351), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: MAP kinase 4 (TAIR:AT4G01370.1); Has 126445 Blast hits to 124887 proteins in 4831 species: Archae - 118; Bacteria - 13666; Metazoa - 48018; Fungi - 12607; Plants - 30504; Viruses - 585; Other Eukaryotes - 20947 (source: NCBI BLink). & (q336x9|mpk6_orysa : 366.0) Mitogen-activated protein kinase 6 (EC 2.7.11.24) (MAP kinase 6) - Oryza sativa (Rice) & (reliability: 734.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001604.2","No alias","Cyanophora paradoxa","(at1g16240 : 81.6) Encodes one of 24 Arabidopsis syntaxins. Its mRNA has been shown to be expressed.; syntaxin of plants 51 (SYP51); CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), t-SNARE (InterPro:IPR010989), Syntaxin/epimorphin, conserved site (InterPro:IPR006012); BEST Arabidopsis thaliana protein match is: syntaxin of plants 52 (TAIR:AT1G79590.2); Has 550 Blast hits to 550 proteins in 163 species: Archae - 0; Bacteria - 4; Metazoa - 169; Fungi - 163; Plants - 161; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). & (reliability: 163.2) &  (original description: no original description)","protein_coding"
"evm.model.tig00020531.54","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020537.64","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020538.14","No alias","Cyanophora paradoxa","(at2g19560 : 210.0) encodes a protein with a PAM domain involved in ethylene signaling. eer5 mutants show ethylene hypersensitivity in relation to hypocotyl elongation. EER5 interacts with EIN2 and with COP9 in Y2H assays. EIN3 protein levels are the same in WT and eer5-1 mutants. EER5 may be involved in promoting a dampening of the ethylene response.; ENHANCED ETHYLENE RESPONSE 5 (EER5); CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717), PCI/PINT associated module (InterPro:IPR013143); Has 771 Blast hits to 770 proteins in 220 species: Archae - 0; Bacteria - 0; Metazoa - 260; Fungi - 323; Plants - 58; Viruses - 0; Other Eukaryotes - 130 (source: NCBI BLink). & (reliability: 420.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020539.37","No alias","Cyanophora paradoxa","(p80028|trxh_chlre : 104.0) Thioredoxin H-type (TRX-H) (Thioredoxin CH1) - Chlamydomonas reinhardtii & (at2g35010 : 84.3) thioredoxin O1 (TO1); INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin, core (InterPro:IPR015467), Thioredoxin-like (InterPro:IPR017936), Thioredoxin domain (InterPro:IPR013766), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin O2 (TAIR:AT1G31020.1); Has 13800 Blast hits to 13766 proteins in 2821 species: Archae - 178; Bacteria - 7899; Metazoa - 1073; Fungi - 652; Plants - 1267; Viruses - 5; Other Eukaryotes - 2726 (source: NCBI BLink). & (reliability: 168.6) &  (original description: no original description)","protein_coding"
"evm.model.tig00020553.174","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020554.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020554.157","No alias","Cyanophora paradoxa","(at1g51710 : 330.0) Ubiquitin-specific protease 6 (UBP6). Deubiquinating enzyme. Interacts with calmodulin.; ubiquitin-specific protease 6 (UBP6); CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 7 (TAIR:AT3G21280.1); Has 4803 Blast hits to 4486 proteins in 237 species: Archae - 0; Bacteria - 0; Metazoa - 2534; Fungi - 849; Plants - 654; Viruses - 2; Other Eukaryotes - 764 (source: NCBI BLink). & (reliability: 660.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020554.162","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020554.3","No alias","Cyanophora paradoxa","(at2g14170 : 352.0) Arabidopsis thaliana methylmalonate-semialdehyde dehydrogenase; aldehyde dehydrogenase  6B2 (ALDH6B2); CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160), Methylmalonate-semialdehyde dehydrogenase (InterPro:IPR010061); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 2C4 (TAIR:AT3G24503.1); Has 57527 Blast hits to 57240 proteins in 2927 species: Archae - 475; Bacteria - 33264; Metazoa - 2506; Fungi - 2072; Plants - 1211; Viruses - 0; Other Eukaryotes - 17999 (source: NCBI BLink). & (p28237|badh_betvu : 97.8) Betaine-aldehyde dehydrogenase, chloroplast precursor (EC 1.2.1.8) (BADH) - Beta vulgaris (Sugar beet) & (reliability: 704.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020554.39","No alias","Cyanophora paradoxa","(at4g28510 : 218.0) prohibitin 1 (Atphb1); prohibitin 1 (PHB1); INVOLVED IN: response to stress; LOCATED IN: mitochondrion, plasma membrane, respiratory chain complex I; EXPRESSED IN: 10 plant structures; CONTAINS InterPro DOMAIN/s: Prohibitin (InterPro:IPR000163), Band 7 protein (InterPro:IPR001107); BEST Arabidopsis thaliana protein match is: prohibitin 6 (TAIR:AT2G20530.2); Has 4079 Blast hits to 4077 proteins in 1204 species: Archae - 185; Bacteria - 2047; Metazoa - 512; Fungi - 318; Plants - 262; Viruses - 12; Other Eukaryotes - 743 (source: NCBI BLink). & (reliability: 436.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020562.30","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020563.86","No alias","Cyanophora paradoxa","(at5g50920 : 990.0) Encodes a protein that is similar to ATP-dependent Clp protease ATP-binding subunit / ClpC. Involved in protein import into the chloroplast. May provide ATP source that drives the TIC (Translocon at the Inner envelope membrane of Chloroplasts) translocation machinery.; CLPC homologue 1 (CLPC1); FUNCTIONS IN: ATP-dependent peptidase activity, ATPase activity, ATP binding; INVOLVED IN: protein import into chloroplast stroma, regulation of chlorophyll biosynthetic process, protein targeting to chloroplast, chloroplast organization; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-2 (InterPro:IPR013093), ATPase, AAA+ type, core (InterPro:IPR003593), Chaperonin clpA/B (InterPro:IPR001270), Chaperonin ClpA/B, conserved site (InterPro:IPR018368), UvrB/UvrC protein (InterPro:IPR001943), Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: Clp ATPase (TAIR:AT3G48870.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p35100|clpc_pea : 984.0) ATP-dependent Clp protease ATP-binding subunit clpC homolog, chloroplast precursor - Pisum sativum (Garden pea) & (reliability: 1980.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020564.48","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020610.89","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020614.5","No alias","Cyanophora paradoxa","(p93768|psmd3_tobac : 370.0) Probable 26S proteasome non-ATPase regulatory subunit 3 (26S proteasome subunit S3) (Nuclear antigen 21D7) - Nicotiana tabacum (Common tobacco) & (at1g75990 : 352.0) PAM domain (PCI/PINT associated module) protein; FUNCTIONS IN: enzyme regulator activity; INVOLVED IN: protein catabolic process, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome complex, plasma membrane, proteasome regulatory particle, lid subcomplex, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717), PCI/PINT associated module (InterPro:IPR013143), 26S proteasome regulatory subunit, C-terminal (InterPro:IPR013586); BEST Arabidopsis thaliana protein match is: PAM domain (PCI/PINT associated module) protein (TAIR:AT1G20200.1); Has 740 Blast hits to 739 proteins in 220 species: Archae - 0; Bacteria - 0; Metazoa - 313; Fungi - 146; Plants - 168; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (reliability: 704.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020629.129","No alias","Cyanophora paradoxa","(at1g15140 : 151.0) FAD/NAD(P)-binding oxidoreductase; FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: thylakoid, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Phenol hydroxylase reductase (InterPro:IPR001221); BEST Arabidopsis thaliana protein match is: ferredoxin-NADP(+)-oxidoreductase 2 (TAIR:AT1G20020.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p43394|k502_actch : 124.0) Fruit protein PKIWI502 - Actinidia chinensis (Kiwi) (Yangtao) & (reliability: 302.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020629.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020629.33","No alias","Cyanophora paradoxa","(at2g03430 : 119.0) Ankyrin repeat family protein; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat protein (TAIR:AT5G66055.1); Has 130068 Blast hits to 38689 proteins in 1585 species: Archae - 162; Bacteria - 14649; Metazoa - 59864; Fungi - 13189; Plants - 7735; Viruses - 2061; Other Eukaryotes - 32408 (source: NCBI BLink). & (q8vyx2|akt1_orysa : 82.0) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (reliability: 238.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020684.29","No alias","Cyanophora paradoxa","(q9zsd6|aspg_luplu : 113.0) L-asparaginase precursor (EC 3.5.1.1) (L-asparagine amidohydrolase) [Contains: L-asparaginase subunit alpha; L-asparaginase subunit beta] - Lupinus luteus (European yellow lupin) & (at5g08100 : 112.0) N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein; CONTAINS InterPro DOMAIN/s: Peptidase T2, asparaginase 2 (InterPro:IPR000246); BEST Arabidopsis thaliana protein match is: N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein (TAIR:AT3G16150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 224.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020685.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020780.12","No alias","Cyanophora paradoxa","(at3g20390 : 114.0) endoribonuclease L-PSP family protein; FUNCTIONS IN: endoribonuclease activity; INVOLVED IN: response to cadmium ion; LOCATED IN: thylakoid, mitochondrion, chloroplast, plastid, vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Endoribonuclease L-PSP (InterPro:IPR006175), YjgF-like protein, conserved site (InterPro:IPR019897), Endoribonuclease L-PSP/chorismate mutase-like (InterPro:IPR013813), YjgF-like protein (InterPro:IPR006056); Has 9982 Blast hits to 9763 proteins in 2269 species: Archae - 153; Bacteria - 7551; Metazoa - 243; Fungi - 414; Plants - 68; Viruses - 0; Other Eukaryotes - 1553 (source: NCBI BLink). & (reliability: 228.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020780.8","No alias","Cyanophora paradoxa","(at1g47830 : 226.0) SNARE-like superfamily protein; FUNCTIONS IN: protein transporter activity; INVOLVED IN: intracellular protein transport, transport, protein transport; LOCATED IN: clathrin vesicle coat; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Adaptor protein complex, sigma subunit (InterPro:IPR016635), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: Clathrin adaptor complex small chain family protein (TAIR:AT4G35410.2); Has 1794 Blast hits to 1793 proteins in 248 species: Archae - 0; Bacteria - 0; Metazoa - 780; Fungi - 421; Plants - 260; Viruses - 0; Other Eukaryotes - 333 (source: NCBI BLink). & (o50016|ap2s1_maize : 213.0) AP-2 complex subunit sigma-1 (Clathrin coat assembly protein AP17) (Clathrin coat-associated protein AP17) (Plasma membrane adaptor AP-2 17 kDa protein) (Clathrin assembly protein 2 small chain) - Zea mays (Maize) & (reliability: 452.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020830.43","No alias","Cyanophora paradoxa","(p93436|adhx_orysa : 391.0) Alcohol dehydrogenase class 3 (EC 1.1.1.1) (Alcohol dehydrogenase class III) (S-(hydroxymethyl)glutathione dehydrogenase) (EC 1.1.1.284) (Glutathione-dependent formaldehyde dehydrogenase) (FDH) (FALDH) (GSH-FDH) - Oryza sativa (Rice) & (at5g43940 : 375.0) Encodes a glutathione-dependent formaldehyde dehydrogenase (also known as class III type alcohol dehydrogenase) reduces S-nitrosoglutathione (GSNO), the condensation product of glutathione and NO, that is a naturally occurring NO reservoir and also a reactive nitrogen intermediate. Gene expression is reduced by wounding and induced by salicylic acid. Is required for the acclimation of plants to high temperature and for fertility.; sensitive to hot temperatures 5 (HOT5); CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase (InterPro:IPR014183), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: alcohol dehydrogenase 1 (TAIR:AT1G77120.1). & (reliability: 750.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020830.57","No alias","Cyanophora paradoxa","(at4g33060 : 257.0) Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: cyclophilin71 (TAIR:AT3G44600.1); Has 24116 Blast hits to 22276 proteins in 2786 species: Archae - 119; Bacteria - 7703; Metazoa - 5717; Fungi - 2149; Plants - 1502; Viruses - 35; Other Eukaryotes - 6891 (source: NCBI BLink). & (reliability: 514.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020830.84","No alias","Cyanophora paradoxa","(q9sxu1|psa7_cicar : 343.0) Proteasome subunit alpha type 7 (EC 3.4.25.1) (20S proteasome alpha subunit D) (20S proteasome subunit alpha-4) - Cicer arietinum (Chickpea) (Garbanzo) & (at5g66140 : 332.0) Encodes alpha5 subunit of 20S proteosome complex involved in protein degradation.; proteasome alpha subunit D2 (PAD2); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex, proteasome core complex, alpha-subunit complex, chloroplast, vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: 20S proteasome  alpha subunit PAD1 (TAIR:AT3G51260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 662.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020848.76","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020875.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020902.32","No alias","Cyanophora paradoxa","(at2g42810 : 488.0) Encodes a phytochrome-specific type 5 serine/threonine protein phosphatase. It dephosphorylates active Pfr-phytochromes. Controls light signal flux by enhancing phytochrome stability and affinity for a signal transducer. The gene is alternately spliced. This variant is an integral membrane protein localized to the ER and nuclear envelope.; protein phosphatase 5.2 (PP5.2); FUNCTIONS IN: protein binding, phosphoprotein phosphatase activity, protein serine/threonine phosphatase activity; INVOLVED IN: response to cadmium ion, nucleocytoplasmic transport, red or far-red light signaling pathway; LOCATED IN: nuclear envelope, integral to endoplasmic reticulum membrane, nucleus, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Metallophosphoesterase (InterPro:IPR004843), Protein phosphatase 5 (InterPro:IPR011236), Tetratricopeptide-like helical (InterPro:IPR011990), Serine/threonine phosphatase, PPP5 (InterPro:IPR013235), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT5G27840.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p48579|pp2a_helan : 174.0) Serine/threonine-protein phosphatase PP2A catalytic subunit (EC 3.1.3.16) - Helianthus annuus (Common sunflower) & (reliability: 976.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020904.49","No alias","Cyanophora paradoxa","(at5g13120 : 180.0) Encodes a lumenal cyclophilin with peptidyl-prolyl isomerase activity that is associated with the NAD(P)H dehydrogenase complex in stromal regions of the thylakoid membrane. It is likely to be important for the accumulation of the hydrophobic domain of the NAD(P)H dehydrogenase complex. This complex is associated with PSI and is responsible for the reduction of plastoquinone.; cyclophilin 20-2 (CYP20-2); CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: rotamase CYP 4 (TAIR:AT3G62030.1). & (q41651|cypb_vicfa : 179.0) Peptidyl-prolyl cis-trans isomerase, chloroplast precursor (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) (CYP B) - Vicia faba (Broad bean) & (reliability: 360.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020934.33","No alias","Cyanophora paradoxa","(at1g69670 : 839.0) cullin, putative, contains similarity to Cullin homolog 3 (CUL-3) SP:Q13618, GI:3639052 from (Homo sapiens); contains Pfam profile PF00888: Cullin family. Interacts with members of AtBPM family and RBX1 suggesting it is part of an E3 ligase complex involved in RUB modification.; cullin 3B (CUL3B); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Cullin homology (InterPro:IPR016158), Cullin protein, neddylation domain (InterPro:IPR019559), Cullin, N-terminal (InterPro:IPR001373), Cullin repeat-like-containing domain (InterPro:IPR016159); BEST Arabidopsis thaliana protein match is: cullin 3 (TAIR:AT1G26830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1678.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020938.23","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020952.50","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020960.54","No alias","Cyanophora paradoxa","(at5g10980 : 159.0) Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleosome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3 (InterPro:IPR000164), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT4G40030.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q71h73|h33_vitvi : 157.0) Histone H3.3 - Vitis vinifera (Grape) & (reliability: 318.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020961.2","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020965.65","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020996.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021017.32","No alias","Cyanophora paradoxa","(at5g11850 : 83.6) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: protein tyrosine kinase family protein (TAIR:AT1G73660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 162.6) &  (original description: no original description)","protein_coding"
"evm.model.tig00021036.34","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021037.27","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021038.48","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021123.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021123.11","No alias","Cyanophora paradoxa","(at1g71820 : 147.0) Encodes a member of the exocyst complex gene family. The exocyst is a protein complex involved in tethering vesicles to the plasma membrane during regulated or polarized secretion.; SEC6; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen germination, pollen tube growth; LOCATED IN: cytosol, exocyst; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Exocyst complex component Sec6 (InterPro:IPR010326). & (reliability: 294.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021127.178","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021168.13","No alias","Cyanophora paradoxa","(at5g46630 : 357.0) clathrin adaptor complexes medium subunit family protein, contains Pfam profile: PF00928 adaptor complexes medium subunit family; similar to micro-adaptins of clathrin coated vesicle adaptor complexes; Clathrin adaptor complexes medium subunit family protein; INVOLVED IN: intracellular protein transport, transport, vesicle-mediated transport; LOCATED IN: clathrin vesicle coat, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, mu subunit, conserved site (InterPro:IPR018240), Clathrin adaptor, mu subunit, C-terminal (InterPro:IPR008968), Clathrin adaptor, mu subunit (InterPro:IPR001392), Clathrin coat associated protein AP-50 (InterPro:IPR015629), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: Clathrin adaptor complexes medium subunit family protein (TAIR:AT1G60780.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 714.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021168.22","No alias","Cyanophora paradoxa","(at3g04240 : 89.7) Has O-linked N-acetyl glucosamine transferase activity. Similar to Arabidopsis SPY gene.; secret agent (SEC); CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G11540.1); Has 114710 Blast hits to 35863 proteins in 2480 species: Archae - 3197; Bacteria - 54774; Metazoa - 16661; Fungi - 4580; Plants - 3873; Viruses - 0; Other Eukaryotes - 31625 (source: NCBI BLink). & (reliability: 179.4) &  (original description: no original description)","protein_coding"
"evm.model.tig00021254.42","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021281.38","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021314.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021319.61","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021348.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021348.57","No alias","Cyanophora paradoxa","(at5g64760 : 270.0) Encodes one of two isoforms for the 26S proteasome regulatory protein (RN) subunit RPN5. For many functions it acts redundantly with the paralogous genes RPN5a.; regulatory particle non-ATPase subunit 5B (RPN5B); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Proteasome component (PCI) domain (InterPro:IPR000717); BEST Arabidopsis thaliana protein match is: 26S proteasome regulatory subunit, putative (RPN5) (TAIR:AT5G09900.2); Has 838 Blast hits to 828 proteins in 229 species: Archae - 0; Bacteria - 0; Metazoa - 302; Fungi - 291; Plants - 115; Viruses - 0; Other Eukaryotes - 130 (source: NCBI BLink). & (reliability: 540.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021348.80","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021428.11","No alias","Cyanophora paradoxa","(at5g02540 : 84.7) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G37540.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 169.4) &  (original description: no original description)","protein_coding"
"evm.model.tig00021432.5","No alias","Cyanophora paradoxa","(at3g20970 : 212.0) Encodes a protein containing the NFU domain that may be involved in iron-sulfur cluster assembly. Part of a five member gene family, more closely related to NFU5 than to NFU1,2, and 3. Targeted to the mitochondrion.; NFU domain protein 4 (NFU4); CONTAINS InterPro DOMAIN/s: NIF system FeS cluster assembly, NifU, C-terminal (InterPro:IPR001075), HIRA-interacting protein 5 (InterPro:IPR017065), NIF system FeS cluster assembly, NifU-like scaffold, N-terminal (InterPro:IPR014824); BEST Arabidopsis thaliana protein match is: NFU domain protein 5 (TAIR:AT1G51390.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 424.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021434.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021435.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021463.2","No alias","Cyanophora paradoxa","(q96468|bas1_horvu : 223.0) 2-cys peroxiredoxin BAS1, chloroplast precursor (EC 1.11.1.15) (Thiol-specific antioxidant protein) (Fragment) - Hordeum vulgare (Barley) & (at3g11630 : 216.0) Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues.; Thioredoxin superfamily protein; FUNCTIONS IN: peroxiredoxin activity, antioxidant activity; INVOLVED IN: response to cold, defense response to bacterium; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peroxiredoxin, C-terminal (InterPro:IPR019479), Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: 2-cysteine peroxiredoxin B (TAIR:AT5G06290.1); Has 16794 Blast hits to 16794 proteins in 2739 species: Archae - 621; Bacteria - 10920; Metazoa - 1157; Fungi - 359; Plants - 398; Viruses - 0; Other Eukaryotes - 3339 (source: NCBI BLink). & (reliability: 432.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021464.37","No alias","Cyanophora paradoxa","(at3g13870 : 118.0) required for regulated cell expansion and normal root hair development. Encodes an evolutionarily conserved protein with putative GTP-binding motifs that is implicated in the control of vesicle trafficking between the endoplasmic reticulum and the Golgi compartments.; ROOT HAIR DEFECTIVE 3 (RHD3); FUNCTIONS IN: GTP binding; INVOLVED IN: root epidermal cell differentiation, plant-type cell wall biogenesis, ER to Golgi vesicle-mediated transport, actin cytoskeleton organization, cell tip growth; LOCATED IN: endoplasmic reticulum, plasma membrane, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Root hair defective 3 GTP-binding (InterPro:IPR008803); BEST Arabidopsis thaliana protein match is: Root hair defective 3 GTP-binding protein (RHD3) (TAIR:AT1G72960.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 236.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021582.10","No alias","Cyanophora paradoxa","(at4g22220 : 202.0) Encodes a mitochondrial protein similar to E.coli IscU.  In bacteria, IscU is a scaffold protein accepting sulfur and iron to build a transient Fe-S cluster,which is subsequently transferred to a target apoprotein.; ISU1; CONTAINS InterPro DOMAIN/s: NIF system FeS cluster assembly, NifU, N-terminal (InterPro:IPR002871), ISC system FeS cluster assembly, IscU scaffold (InterPro:IPR011339); BEST Arabidopsis thaliana protein match is: ISCU-like 3 (TAIR:AT4G04080.1); Has 5453 Blast hits to 5453 proteins in 1998 species: Archae - 110; Bacteria - 3654; Metazoa - 148; Fungi - 154; Plants - 89; Viruses - 0; Other Eukaryotes - 1298 (source: NCBI BLink). & (reliability: 400.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021582.20","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021589.24","No alias","Cyanophora paradoxa","(at2g13540 : 267.0) Encodes a nuclear cap-binding protein that forms a heterodimeric complex with CBP20 and is involved in ABA signaling and flowering. Mutants are early flowering and exhibit hypersensitive response to ABA in germination inhibition.Loss of ABH1 function results in abnormal processing of mRNAs for several important floral regulators (FLC, CO, FLM). Analysis of loss of function mutations suggests a role in pri-miRNA processing and mRNA splicing. Note that two different mutant alleles were given the same name abh1-7 (Kuhn et al 2007; Kim et al 2008).  To avoid confusion, abh1-7 described in Kim et al (2008) has been renamed abh1-107 (other names: ensalada-1, ens-1).; ABA HYPERSENSITIVE 1 (ABH1); CONTAINS InterPro DOMAIN/s: MIF4G-like, type 2 (InterPro:IPR015174), MIF4G-like, type 1 (InterPro:IPR015172), Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890), MIF4-like, type 1/2/3 (InterPro:IPR016021); Has 514 Blast hits to 510 proteins in 229 species: Archae - 0; Bacteria - 96; Metazoa - 188; Fungi - 131; Plants - 55; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). & (reliability: 534.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021589.4","No alias","Cyanophora paradoxa","(at4g09020 : 568.0) Encodes an isoamylase-like protein. Mutant studies show that the gene is strongly involved in starch breakdown. A GUS-protein fusion product was shown to localize to the surface of chloroplastic structures reminiscent of starch granules. In the mutants, the chloroplastic α-amylase AMY3 is upregulated.; isoamylase 3 (ISA3); FUNCTIONS IN: isoamylase activity, alpha-amylase activity; INVOLVED IN: carbohydrate metabolic process, starch catabolic process; LOCATED IN: chloroplast, chloroplast stroma, chloroplast starch grain; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl hydrolase, family 13, all-beta (InterPro:IPR013780), Immunoglobulin-like fold (InterPro:IPR013783), Glycoside hydrolase, family 13, N-terminal (InterPro:IPR004193), Immunoglobulin E-set (InterPro:IPR014756), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: isoamylase 1 (TAIR:AT2G39930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1136.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021590.10","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021612.33","No alias","Cyanophora paradoxa","(at1g22660 : 241.0) Polynucleotide adenylyltransferase family protein; FUNCTIONS IN: tRNA adenylyltransferase activity, RNA binding, nucleotidyltransferase activity; INVOLVED IN: tRNA processing, RNA processing; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Poly A polymerase, head domain (InterPro:IPR002646); BEST Arabidopsis thaliana protein match is: Polynucleotide adenylyltransferase family protein (TAIR:AT2G17580.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 482.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021612.44","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021612.47","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021720.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00022075.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00022075.37","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"Glyma.02G058400","No alias","Glycine max","C2H2-like zinc finger protein","protein_coding"
"Glyma.02G058500","No alias","Glycine max","C2H2-like zinc finger protein","protein_coding"
"Glyma.02G068100","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.02G106600","No alias","Glycine max","origin recognition complex protein 6","protein_coding"
"Glyma.02G289400","No alias","Glycine max","chloroplastic lipocalin","protein_coding"
"Glyma.02G299600","No alias","Glycine max","Spo11/DNA topoisomerase VI, subunit A protein","protein_coding"
"Glyma.03G019600","No alias","Glycine max","SIN3 associated polypeptide P18","protein_coding"
"Glyma.03G079200","No alias","Glycine max","RING/U-box superfamily protein","protein_coding"
"Glyma.03G104000","No alias","Glycine max","ferredoxin-related","protein_coding"
"Glyma.03G173300","No alias","Glycine max","C2H2 and C2HC zinc fingers superfamily protein","protein_coding"
"Glyma.03G236100","No alias","Glycine max","cell cycle checkpoint control protein family","protein_coding"
"Glyma.03G251900","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.04G058400","No alias","Glycine max","histidine kinase 5","protein_coding"
"Glyma.05G004600","No alias","Glycine max","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"Glyma.05G097100","No alias","Glycine max","SKP1/ASK1-interacting protein 2","protein_coding"
"Glyma.05G111900","No alias","Glycine max","Clathrin adaptor complexes medium subunit family protein","protein_coding"
"Glyma.05G140600","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.05G232700","No alias","Glycine max","alpha/beta-Hydrolases superfamily protein","protein_coding"
"Glyma.06G044200","No alias","Glycine max","NRAMP metal ion transporter 2","protein_coding"
"Glyma.06G110450","No alias","Glycine max","camphor resistance CrcB family protein","protein_coding"
"Glyma.06G149500","No alias","Glycine max","nodulin MtN21 /EamA-like transporter family protein","protein_coding"
"Glyma.06G254900","No alias","Glycine max","diacylglycerol kinase 5","protein_coding"
"Glyma.06G292300","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.07G005000","No alias","Glycine max","RAD3-like DNA-binding helicase protein","protein_coding"
"Glyma.07G088900","No alias","Glycine max","Protein of unknown function, DUF538","protein_coding"
"Glyma.07G216300","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Glyma.08G115800","No alias","Glycine max","general regulatory factor 9","protein_coding"
"Glyma.08G131100","No alias","Glycine max","Pentatricopeptide repeat (PPR-like) superfamily protein","protein_coding"
"Glyma.08G175050","No alias","Glycine max","glutathione S-transferase TAU 19","protein_coding"
"Glyma.09G098800","No alias","Glycine max","Protein of unknown function (DUF1068)","protein_coding"
"Glyma.09G285400","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.10G019200","No alias","Glycine max","DNA mismatch repair protein, putative","protein_coding"
"Glyma.10G099100","No alias","Glycine max","Dynein light chain type 1 family protein","protein_coding"
"Glyma.10G247850","No alias","Glycine max","L-Aspartase-like family protein","protein_coding"
"Glyma.10G286900","No alias","Glycine max","GRAM domain-containing protein / ABA-responsive protein-related","protein_coding"
"Glyma.11G174073","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.11G194700","No alias","Glycine max","ABC transporter family protein","protein_coding"
"Glyma.11G253600","No alias","Glycine max","putative recombination initiation defect 1","protein_coding"
"Glyma.12G043600","No alias","Glycine max","Protein kinase superfamily protein","protein_coding"
"Glyma.13G034200","No alias","Glycine max","Glutathione S-transferase family protein","protein_coding"
"Glyma.13G059800","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.13G266600","No alias","Glycine max","BES1/BZR1 homolog 4","protein_coding"
"Glyma.13G333300","No alias","Glycine max","methyl-CPG-binding domain 7","protein_coding"
"Glyma.13G340400","No alias","Glycine max","RING/U-box superfamily protein","protein_coding"
"Glyma.13G343500","No alias","Glycine max","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding"
"Glyma.14G070200","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.14G154200","No alias","Glycine max","Cyclin A1;1","protein_coding"
"Glyma.14G187700","No alias","Glycine max","Metallo-hydrolase/oxidoreductase superfamily protein","protein_coding"
"Glyma.14G198900","No alias","Glycine max","laccase 3","protein_coding"
"Glyma.15G030800","No alias","Glycine max","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding"
"Glyma.15G060600","No alias","Glycine max","Octicosapeptide/Phox/Bem1p family protein","protein_coding"
"Glyma.15G272100","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Glyma.16G006900","No alias","Glycine max","Calcineurin-like metallo-phosphoesterase superfamily protein","protein_coding"
"Glyma.16G016000","No alias","Glycine max","purple acid phosphatase 29","protein_coding"
"Glyma.16G042300","No alias","Glycine max","GATA transcription factor 9","protein_coding"
"Glyma.16G131500","No alias","Glycine max","Leucine-rich repeat receptor-like protein kinase family protein","protein_coding"
"Glyma.16G163500","No alias","Glycine max","Nucleotide-sugar transporter family protein","protein_coding"
"Glyma.16G194000","No alias","Glycine max","single-stranded DNA endonuclease family protein","protein_coding"
"Glyma.17G023400","No alias","Glycine max","CHY-type/CTCHY-type/RING-type Zinc finger protein","protein_coding"
"Glyma.17G200500","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.18G019900","No alias","Glycine max","NAD(P)-binding Rossmann-fold superfamily protein","protein_coding"
"Glyma.18G074000","No alias","Glycine max","FKBP-like peptidyl-prolyl cis-trans isomerase family protein","protein_coding"
"Glyma.18G081000","No alias","Glycine max","CCCH-type zinc fingerfamily protein with RNA-binding domain","protein_coding"
"Glyma.18G116700","No alias","Glycine max","putative mitochondrial RNA helicase 2","protein_coding"
"Glyma.18G136200","No alias","Glycine max","trehalose phosphate synthase","protein_coding"
"Glyma.18G205200","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.19G029500","No alias","Glycine max","UDP-Glycosyltransferase superfamily protein","protein_coding"
"Glyma.19G127101","No alias","Glycine max","Cam interacting protein 111","protein_coding"
"Glyma.19G233800","No alias","Glycine max","cell cycle checkpoint control protein family","protein_coding"
"Glyma.19G253200","No alias","Glycine max","Mitochondrial substrate carrier family protein","protein_coding"
"Glyma.20G051100","No alias","Glycine max","Protein of unknown function (DUF630 and DUF632)","protein_coding"
"Glyma.20G077000","No alias","Glycine max","peroxisomal 3-ketoacyl-CoA thiolase 3","protein_coding"
"Glyma.20G083000","No alias","Glycine max","plasmodesmata-located protein 2","protein_coding"
"Glyma.20G088200","No alias","Glycine max","HR-like lesion-inducing protein-related","protein_coding"
"Glyma.20G095300","No alias","Glycine max","damaged DNA binding;exodeoxyribonuclease IIIs","protein_coding"
"Glyma.20G160400","No alias","Glycine max","Ribosomal protein L36e family protein","protein_coding"
"Glyma.20G170700","No alias","Glycine max","RAN binding protein 1","protein_coding"
"Glyma.20G171800","No alias","Glycine max","Subunits of heterodimeric actin filament capping protein Capz superfamily","protein_coding"
"Glyma.20G212500","No alias","Glycine max","Uncharacterised conserved protein (UCP030210)","protein_coding"
"GRMZM2G003835","No alias","Zea mays","embryo defective 2752","protein_coding"
"GRMZM2G003875","No alias","Zea mays","Glycinamide ribonucleotide (GAR) synthetase","protein_coding"
"GRMZM2G004908","No alias","Zea mays","TRAF-like family protein","protein_coding"
"GRMZM2G005435","No alias","Zea mays","PPPDE putative thiol peptidase family protein","protein_coding"
"GRMZM2G005938","No alias","Zea mays","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"GRMZM2G006006","No alias","Zea mays","Protein of unknown function (DUF3531)","protein_coding"
"GRMZM2G007884","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G009724","No alias","Zea mays","BTB-POZ and MATH domain 1","protein_coding"
"GRMZM2G011858","No alias","Zea mays","root FNR 2","protein_coding"
"GRMZM2G014397","No alias","Zea mays","thylakoidal ascorbate peroxidase","protein_coding"
"GRMZM2G017557","No alias","Zea mays","O-methyltransferase family protein","protein_coding"
"GRMZM2G021439","No alias","Zea mays","damaged DNA binding;exodeoxyribonuclease IIIs","protein_coding"
"GRMZM2G024444","No alias","Zea mays","Glycosyltransferase family 61 protein","protein_coding"
"GRMZM2G025059","No alias","Zea mays","XH/XS domain-containing protein","protein_coding"
"GRMZM2G031846","No alias","Zea mays","RNA-binding (RRM/RBD/RNP motifs) family protein","protein_coding"
"GRMZM2G033526","No alias","Zea mays","plastidial pyruvate kinase 3","protein_coding"
"GRMZM2G037630","No alias","Zea mays","nuclear factor Y, subunit A6","protein_coding"
"GRMZM2G041991","No alias","Zea mays","B-box type zinc finger protein with CCT domain","protein_coding"
"GRMZM2G047404","No alias","Zea mays","Glucose-6-phosphate/phosphate translocator-related","protein_coding"
"GRMZM2G047705","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G050076","No alias","Zea mays","NAD(P)-binding Rossmann-fold superfamily protein","protein_coding"
"GRMZM2G051842","No alias","Zea mays","pfkB-like carbohydrate kinase family protein","protein_coding"
"GRMZM2G052036","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G052132","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G052341","No alias","Zea mays","CAP-binding protein 20","protein_coding"
"GRMZM2G053384","No alias","Zea mays","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"GRMZM2G054145","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G056075","No alias","Zea mays","MUTS homolog 2","protein_coding"
"GRMZM2G058078","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G058402","No alias","Zea mays","F1F0-ATPase inhibitor protein, putative","protein_coding"
"GRMZM2G058702","No alias","Zea mays","2-oxoacid dehydrogenases acyltransferase family protein","protein_coding"
"GRMZM2G060255","No alias","Zea mays","Adenine nucleotide alpha hydrolases-like superfamily protein","protein_coding"
"GRMZM2G060505","No alias","Zea mays","mitotic phosphoprotein N\' end (MPPN) family protein","protein_coding"
"GRMZM2G063827","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G065480","No alias","Zea mays","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"GRMZM2G067306","No alias","Zea mays","Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain","protein_coding"
"GRMZM2G068193","No alias","Zea mays","cyclin-dependent kinase B2;2","protein_coding"
"GRMZM2G069827","No alias","Zea mays","SNF7 family protein","protein_coding"
"GRMZM2G070111","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G071288","No alias","Zea mays","Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein","protein_coding"
"GRMZM2G073123","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G073548","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G073584","No alias","Zea mays","beta galactosidase 9","protein_coding"
"GRMZM2G074427","No alias","Zea mays","phytochrome-associated protein 1","protein_coding"
"GRMZM2G076392","No alias","Zea mays","phosphatidyl inositol monophosphate 5 kinase","protein_coding"
"GRMZM2G076885","No alias","Zea mays","semialdehyde dehydrogenase family protein","protein_coding"
"GRMZM2G076950","No alias","Zea mays","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"GRMZM2G078275","No alias","Zea mays","ATP-dependent RNA helicase, mitochondrial (SUV3)","protein_coding"
"GRMZM2G081668","No alias","Zea mays","TatD related DNase","protein_coding"
"GRMZM2G089596","No alias","Zea mays","basic helix-loop-helix (bHLH) DNA-binding superfamily protein","protein_coding"
"GRMZM2G091419","No alias","Zea mays","Nucleic acid-binding, OB-fold-like protein","protein_coding"
"GRMZM2G095039","No alias","Zea mays","ralf-like 33","protein_coding"
"GRMZM2G095147","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G095400","No alias","Zea mays","Radical SAM superfamily protein","protein_coding"
"GRMZM2G096153","No alias","Zea mays","glutathione S-transferase F11","protein_coding"
"GRMZM2G098182","No alias","Zea mays","Protein of unknown function (DUF679)","protein_coding"
"GRMZM2G098397","No alias","Zea mays","glucuronidase 2","protein_coding"
"GRMZM2G099049","No alias","Zea mays","Dormancy/auxin associated family protein","protein_coding"
"GRMZM2G101547","No alias","Zea mays","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"GRMZM2G102450","No alias","Zea mays","Putative thiol-disulphide oxidoreductase DCC","protein_coding"
"GRMZM2G103281","No alias","Zea mays","phosphorylethanolamine cytidylyltransferase 1","protein_coding"
"GRMZM2G109126","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G109130","No alias","Zea mays","lipoxygenase 1","protein_coding"
"GRMZM2G110057","No alias","Zea mays","F-box family protein","protein_coding"
"GRMZM2G111533","No alias","Zea mays","saposin B domain-containing protein","protein_coding"
"GRMZM2G112003","No alias","Zea mays","SWIM zinc finger family protein","protein_coding"
"GRMZM2G113513","No alias","Zea mays","RNA binding (RRM/RBD/RNP motifs) family protein","protein_coding"
"GRMZM2G114322","No alias","Zea mays","expansin-like A1","protein_coding"
"GRMZM2G114672","No alias","Zea mays","acyl-CoA binding protein 4","protein_coding"
"GRMZM2G115879","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G117786","No alias","Zea mays","2-oxoacid dehydrogenases acyltransferase family protein","protein_coding"
"GRMZM2G119773","No alias","Zea mays","homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1","protein_coding"
"GRMZM2G120353","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G122848","No alias","Zea mays","RING/U-box superfamily protein","protein_coding"
"GRMZM2G123940","No alias","Zea mays","serine carboxypeptidase-like 45","protein_coding"
"GRMZM2G125531","No alias","Zea mays","RNA-binding KH domain-containing protein","protein_coding"
"GRMZM2G126832","No alias","Zea mays","Protein phosphatase 2C family protein","protein_coding"
"GRMZM2G127537","No alias","Zea mays","homeobox from Arabidopsis thaliana","protein_coding"
"GRMZM2G127609","No alias","Zea mays","chaperonin 20","protein_coding"
"GRMZM2G128080","No alias","Zea mays","Translin family protein","protein_coding"
"GRMZM2G128432","No alias","Zea mays","Primosome PriB/single-strand DNA-binding","protein_coding"
"GRMZM2G129879","No alias","Zea mays","Protein of unknown function (DUF581)","protein_coding"
"GRMZM2G132944","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G133986","No alias","Zea mays","cell cycle checkpoint control protein family","protein_coding"
"GRMZM2G138572","No alias","Zea mays","ATPase E1","protein_coding"
"GRMZM2G145827","No alias","Zea mays","DYNAMIN-like 1C","protein_coding"
"GRMZM2G146047","No alias","Zea mays","zinc finger (CCCH type) helicase family protein","protein_coding"
"GRMZM2G149330","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G154896","No alias","Zea mays","Nucleic acid-binding, OB-fold-like protein","protein_coding"
"GRMZM2G159547","No alias","Zea mays","myb domain protein 93","protein_coding"
"GRMZM2G160687","No alias","Zea mays","K-box region and MADS-box transcription factor family protein","protein_coding"
"GRMZM2G162697","No alias","Zea mays","Eukaryotic rpb5 RNA polymerase subunit family protein","protein_coding"
"GRMZM2G162725","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G165521","No alias","Zea mays","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"GRMZM2G165815","No alias","Zea mays","FRAGILE HISTIDINE TRIAD","protein_coding"
"GRMZM2G169914","No alias","Zea mays","S-adenosylmethionine carrier 2","protein_coding"
"GRMZM2G170452","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G170558","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G171716","No alias","Zea mays","Protein of unknown function (DUF1295)","protein_coding"
"GRMZM2G171994","No alias","Zea mays","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"GRMZM2G172883","No alias","Zea mays","histone deacetylase 1","protein_coding"
"GRMZM2G173989","No alias","Zea mays","PNAS-3 related","protein_coding"
"GRMZM2G174315","No alias","Zea mays","alpha/beta-Hydrolases superfamily protein","protein_coding"
"GRMZM2G174917","No alias","Zea mays","DREB and EAR motif protein 3","protein_coding"
"GRMZM2G175280","No alias","Zea mays","Basic-leucine zipper (bZIP) transcription factor family protein","protein_coding"
"GRMZM2G175867","No alias","Zea mays","RH39","protein_coding"
"GRMZM2G176022","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G178859","No alias","Zea mays","cytochrome c oxidase 10","protein_coding"
"GRMZM2G302604","No alias","Zea mays","polyol/monosaccharide transporter 5","protein_coding"
"GRMZM2G305856","No alias","Zea mays","myb domain protein 48","protein_coding"
"GRMZM2G318681","No alias","Zea mays","ELMO/CED-12 family protein","protein_coding"
"GRMZM2G321239","No alias","Zea mays","calmodulin-domain protein kinase 5","protein_coding"
"GRMZM2G322634","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G324669","No alias","Zea mays","molybdopterin biosynthesis CNX1 protein / molybdenum cofactor biosynthesis enzyme CNX1 (CNX1)","protein_coding"
"GRMZM2G332843","No alias","Zea mays","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"GRMZM2G345687","No alias","Zea mays","UDP-glucosyl transferase 74D1","protein_coding"
"GRMZM2G364172","No alias","Zea mays","Protein kinase superfamily protein","protein_coding"
"GRMZM2G364982","No alias","Zea mays","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding"
"GRMZM2G367857","No alias","Zea mays","DNA-directed DNA polymerases","protein_coding"
"GRMZM2G390400","No alias","Zea mays","SAC3/GANP/Nin1/mts3/eIF-3 p25 family","protein_coding"
"GRMZM2G408379","No alias","Zea mays","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"GRMZM2G410033","No alias","Zea mays","Tryptophan/tyrosine permease","protein_coding"
"GRMZM2G425230","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G436036","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G439908","No alias","Zea mays","Plant invertase/pectin methylesterase inhibitor superfamily protein","protein_coding"
"GRMZM2G457621","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM2G577191","No alias","Zea mays","Leucine-rich repeat protein kinase family protein","protein_coding"
"GRMZM5G831313","No alias","Zea mays","FAD/NAD(P)-binding oxidoreductase family protein","protein_coding"
"GRMZM5G855413","No alias","Zea mays","Function unknown","protein_coding"
"GRMZM5G861659","No alias","Zea mays","RNA-binding KH domain-containing protein","protein_coding"
"GRMZM5G893603","No alias","Zea mays","glycosyl hydrolase 9B8","protein_coding"
"HORVU0Hr1G014270.22","No alias","Hordeum vulgare","regulatory protein *(NOF1) of rDNA transcription","protein_coding"
"HORVU0Hr1G017750.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU0Hr1G034520.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G019340.6","No alias","Hordeum vulgare","component *(XPD) of TFIIh basal transcription factor complex & component *(XPD) of multifunctional TFIIh complex","protein_coding"
"HORVU1Hr1G078310.3","No alias","Hordeum vulgare","hydroxyacyl-ACP dehydratase *(mtHD))","protein_coding"
"HORVU1Hr1G085470.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G090360.2","No alias","Hordeum vulgare","clade A phosphatase","protein_coding"
"HORVU1Hr1G091170.1","No alias","Hordeum vulgare","calcium sensor *(CML)","protein_coding"
"HORVU2Hr1G012520.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G016840.2","No alias","Hordeum vulgare","keto-3-deoxymanno-octulosonic acid 8-phosphate synthase & EC_2.5 transferase transferring alkyl or aryl group, other than methyl group","protein_coding"
"HORVU2Hr1G019850.27","No alias","Hordeum vulgare","scaffold component *(ISU1/2/3) of mitochondrial ISC system assembly phase","protein_coding"
"HORVU2Hr1G033660.1","No alias","Hordeum vulgare","anion transporter *(NRT1/PTR)","protein_coding"
"HORVU2Hr1G037260.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G042640.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G043270.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G048510.1","No alias","Hordeum vulgare","protease *(SBT6.2) & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding"
"HORVU2Hr1G053700.13","No alias","Hordeum vulgare","A1-class (Pepsin) protease","protein_coding"
"HORVU2Hr1G083870.1","No alias","Hordeum vulgare","EC_2.3 acyltransferase & component *(ELP3) of ELONGATOR transcription elongation complex","protein_coding"
"HORVU2Hr1G084270.1","No alias","Hordeum vulgare","component *(NRPD5) of RNA polymerase IV complex & component *(NRPB5) of RNA polymerase II complex & component *(NRPC5) of RNA polymerase III complex & component *(NRPA5) of RNA polymerase I complex","protein_coding"
"HORVU2Hr1G090950.3","No alias","Hordeum vulgare","component *(HUS1) of 9-1-1 DNA damage sensor complex","protein_coding"
"HORVU2Hr1G105390.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G107060.5","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G109910.6","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G111930.1","No alias","Hordeum vulgare","component *(p24-beta) of GPI-anchor protein cargo receptor complex","protein_coding"
"HORVU3Hr1G000770.2","No alias","Hordeum vulgare","PERK protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"HORVU3Hr1G018220.4","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G032340.1","No alias","Hordeum vulgare","component *(uS8) of small ribosomal-subunit (SSU) proteome & component *(uS8m) of small mitoribosomal-subunit proteome","protein_coding"
"HORVU3Hr1G034750.2","No alias","Hordeum vulgare","nucleocytoplasmic transport cargo adaptor protein *(IMP-alpha)","protein_coding"
"HORVU3Hr1G086670.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G088080.1","No alias","Hordeum vulgare","C1-class subclass CEP cysteine endopeptidase & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding"
"HORVU3Hr1G091460.10","No alias","Hordeum vulgare","SETD-type lysine N-methyltransferase","protein_coding"
"HORVU3Hr1G096960.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G103540.1","No alias","Hordeum vulgare","N2-acetylornithine","protein_coding"
"HORVU3Hr1G113950.3","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G005780.5","No alias","Hordeum vulgare","alkaline ceramidase *(ACER)","protein_coding"
"HORVU4Hr1G007440.1","No alias","Hordeum vulgare","GRIK protein kinase & regulatory protein kinase *(GRIK) of SnRK1 complex & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"HORVU4Hr1G012650.8","No alias","Hordeum vulgare","component *(RRP43) of exosome EXO9 core complex","protein_coding"
"HORVU4Hr1G024220.3","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G025600.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G025670.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G046540.6","No alias","Hordeum vulgare","component *(RAD9) of 9-1-1 DNA damage sensor complex","protein_coding"
"HORVU4Hr1G082200.30","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G085310.21","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G036330.3","No alias","Hordeum vulgare","transcription factor *(A/B-GATA)","protein_coding"
"HORVU5Hr1G044540.3","No alias","Hordeum vulgare","MAP-kinase protein phosphatase","protein_coding"
"HORVU5Hr1G058870.2","No alias","Hordeum vulgare","NAK protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"HORVU5Hr1G062880.4","No alias","Hordeum vulgare","substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase complex","protein_coding"
"HORVU5Hr1G080030.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G088830.1","No alias","Hordeum vulgare","cyclic nucleotide-gated cation channel *(CNGC)","protein_coding"
"HORVU5Hr1G088980.1","No alias","Hordeum vulgare","EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen","protein_coding"
"HORVU5Hr1G089040.1","No alias","Hordeum vulgare","EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen","protein_coding"
"HORVU5Hr1G111300.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G124890.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G002030.1","No alias","Hordeum vulgare","RNA editing factor *(MORF)","protein_coding"
"HORVU6Hr1G033090.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G045900.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G064630.3","No alias","Hordeum vulgare","protein S-acyltransferase *(PAT10)","protein_coding"
"HORVU6Hr1G072910.3","No alias","Hordeum vulgare","A1-class (Pepsin) protease & aspartyl protease (APCB) of BAG6-dependent plant immunity","protein_coding"
"HORVU6Hr1G091320.4","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G003940.1","No alias","Hordeum vulgare","component *(uS13m) of small mitoribosomal-subunit proteome","protein_coding"
"HORVU7Hr1G012570.17","No alias","Hordeum vulgare","component *(RAD1-LIKE) of 9-1-1 DNA damage sensor complex","protein_coding"
"HORVU7Hr1G024890.1","No alias","Hordeum vulgare","RNA endonuclease *(FCF1)","protein_coding"
"HORVU7Hr1G059090.5","No alias","Hordeum vulgare","component *(uL1) of large ribosomal-subunit (LSU) proteome","protein_coding"
"HORVU7Hr1G073770.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G078440.9","No alias","Hordeum vulgare","component *(SWC2) of SWR1 chromatin remodeling complex","protein_coding"
"HORVU7Hr1G083480.6","No alias","Hordeum vulgare","exoribonuclease *(ERIL)","protein_coding"
"HORVU7Hr1G097970.8","No alias","Hordeum vulgare","EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen & choline monooxygenase","protein_coding"
"HORVU7Hr1G101170.33","No alias","Hordeum vulgare","M3-class (Thimet) metalloprotease & mitochondrial intermediate peptidase *(OCT1/MIP) & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding"
"HORVU7Hr1G106630.1","No alias","Hordeum vulgare","component *(AUG2) of Augmin gamma-TuRC recruiting complex","protein_coding"
"HORVU7Hr1G110660.2","No alias","Hordeum vulgare","component *(eL30) of large ribosomal-subunit (LSU) proteome","protein_coding"
"HORVU7Hr1G111280.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G115000.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G120450.1","No alias","Hordeum vulgare","EC_3.2 glycosylase","protein_coding"
"Kfl00001_0210","kfl00001_0210_v1.1","Klebsormidium nitens","(q5qm84|tpc1_orysa : 445.0) Probable voltage-dependent calcium channel protein TPC1 (Probable voltage-gated calcium channel) (Two-pore calcium channel protein) - Oryza sativa (Rice) & (at4g03560 : 436.0) Encodes a depolarization-activated Ca(2+) channel. Anti-sense experiments with this gene as well as Sucrose-H(+) symporters and complementation of yeast sucrose uptake mutant cch1 suggest that this protein mediates a voltage-activated Ca(2+ )influx. Mutants lack detectable SV channel activity suggesting TPC1 is essential component of the SV channel. Patch clamp analysis of loss of function mutation indicates TPC1 does not affect Ca2+ signaling in response to abiotic and biotic stress.; two-pore  channel 1 (TPC1); FUNCTIONS IN: voltage-gated calcium channel activity, calcium channel activity; INVOLVED IN: regulation of jasmonic acid biosynthetic process, calcium ion transport, calcium-mediated signaling, seed germination, regulation of stomatal movement; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-HAND 2 (InterPro:IPR018249), Ion transport (InterPro:IPR005821), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 872.0) &  (original description: no original description)","protein_coding"
"Kfl00003_0560","kfl00003_0560_v1.1","Klebsormidium nitens","(at4g36790 : 414.0) Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G18590.1); Has 13584 Blast hits to 13542 proteins in 1941 species: Archae - 325; Bacteria - 10929; Metazoa - 520; Fungi - 516; Plants - 316; Viruses - 4; Other Eukaryotes - 974 (source: NCBI BLink). & (reliability: 828.0) &  (original description: no original description)","protein_coding"
"Kfl00004_0160","kfl00004_0160_v1.1","Klebsormidium nitens","(at3g54650 : 149.0) FBL17; FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: generative cell mitosis, seed development, embryo development, ubiquitin-dependent protein catabolic process, pollen development; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810); Has 1738 Blast hits to 1195 proteins in 149 species: Archae - 0; Bacteria - 27; Metazoa - 733; Fungi - 89; Plants - 663; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink). & (reliability: 298.0) &  (original description: no original description)","protein_coding"
"Kfl00009_0470","kfl00009_0470_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00010_0030","kfl00010_0030_v1.1","Klebsormidium nitens","(at5g39960 : 251.0) GTP binding;GTP binding; FUNCTIONS IN: GTP binding; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP-binding, EngA (InterPro:IPR016484), Small GTP-binding protein (InterPro:IPR005225), GTP1/OBG (InterPro:IPR006073), Guanylate kinase (InterPro:IPR008144), GTP-binding protein, HSR1-related (InterPro:IPR002917); BEST Arabidopsis thaliana protein match is: GTP-binding family protein (TAIR:AT3G12080.1); Has 25797 Blast hits to 22413 proteins in 2944 species: Archae - 203; Bacteria - 19262; Metazoa - 305; Fungi - 220; Plants - 200; Viruses - 0; Other Eukaryotes - 5607 (source: NCBI BLink). & (reliability: 502.0) &  (original description: no original description)","protein_coding"
"Kfl00013_0400","kfl00013_0400_v1.1","Klebsormidium nitens","(at4g13550 : 317.0) triglyceride lipases;triglyceride lipases; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G18640.1); Has 2190 Blast hits to 2187 proteins in 383 species: Archae - 0; Bacteria - 476; Metazoa - 135; Fungi - 440; Plants - 705; Viruses - 12; Other Eukaryotes - 422 (source: NCBI BLink). & (reliability: 634.0) &  (original description: no original description)","protein_coding"
"Kfl00013_0460","kfl00013_0460_v1.1","Klebsormidium nitens","(p19954|rr30_spiol : 231.0) Plastid-specific 30S ribosomal protein 1, chloroplast precursor (PSRP-1) (CS-S5) (CS5) (S22) (Ribosomal protein 1) - Spinacia oleracea (Spinach) & (at5g24490 : 224.0) 30S ribosomal protein, putative; FUNCTIONS IN: structural constituent of ribosome, binding; INVOLVED IN: translation, primary metabolic process; LOCATED IN: ribosome, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S30Ae/sigma 54 modulation protein (InterPro:IPR003489); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 448.0) &  (original description: no original description)","protein_coding"
"Kfl00017_0070","kfl00017_0070_v1.1","Klebsormidium nitens","(at1g53345 : 191.0) unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G09580.1); Has 201 Blast hits to 201 proteins in 75 species: Archae - 6; Bacteria - 102; Metazoa - 2; Fungi - 0; Plants - 47; Viruses - 7; Other Eukaryotes - 37 (source: NCBI BLink). & (reliability: 382.0) &  (original description: no original description)","protein_coding"
"Kfl00019_0370","kfl00019_0370_v1.1","Klebsormidium nitens","(at2g45280 : 300.0) Encodes a protein similar to RAD51C involved in double stranded break repair via homologous recombination. Sensitive to DSB induced by Mitomycin C and gamma irradiation, interacts with Atxrcc3 in yeast two-hybrid assay.  Required for female meiosis but not critical for mitosis under normal conditions.; RAS associated with diabetes protein 51C (RAD51C); CONTAINS InterPro DOMAIN/s: DNA recombination/repair protein RecA/RadB, ATP-binding domain (InterPro:IPR020588), DNA recombination and repair protein, RecA-like (InterPro:IPR016467), DNA recombination and repair protein Rad51, C-terminal (InterPro:IPR013632); BEST Arabidopsis thaliana protein match is: DNA repair (Rad51) family protein (TAIR:AT3G22880.1). & (p37384|dmc1_lillo : 110.0) Meiotic recombination protein DMC1 homolog - Lilium longiflorum (Trumpet lily) & (reliability: 600.0) &  (original description: no original description)","protein_coding"
"Kfl00020_0440","kfl00020_0440_v1.1","Klebsormidium nitens","(at1g07220 : 294.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipopolysaccharide-modifying protein (InterPro:IPR006598), Protein of unknown function DUF821, CAP10-like (InterPro:IPR008539); BEST Arabidopsis thaliana protein match is: Arabidopsis thaliana protein of unknown function (DUF821) (TAIR:AT5G23850.1); Has 670 Blast hits to 661 proteins in 130 species: Archae - 0; Bacteria - 41; Metazoa - 224; Fungi - 131; Plants - 246; Viruses - 2; Other Eukaryotes - 26 (source: NCBI BLink). & (reliability: 588.0) &  (original description: no original description)","protein_coding"
"Kfl00024_0500","kfl00024_0500_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00028_0200","kfl00028_0200_v1.1","Klebsormidium nitens",""(at1g31800 : 658.0) Encodes a protein with β-ring carotenoid hydroxylase activity.; ""cytochrome P450, family 97, subfamily A, polypeptide 3"" (CYP97A3); FUNCTIONS IN: carotene beta-ring hydroxylase activity, oxygen binding; INVOLVED IN: carotenoid biosynthetic process, xanthophyll biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT3G53130.1); Has 33118 Blast hits to 32966 proteins in 1677 species: Archae - 61; Bacteria - 4341; Metazoa - 11636; Fungi - 7136; Plants - 8575; Viruses - 3; Other Eukaryotes - 1366 (source: NCBI BLink). & (o48921|c97b2_soybn : 441.0) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 1316.0) &  (original description: no original description)"","protein_coding"
"Kfl00029_0240","kfl00029_0240_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00029_0270","kfl00029_0270_v1.1","Klebsormidium nitens","(at5g44635 : 779.0) MINICHROMOSOME MAINTENANCE 6 (MCM6); FUNCTIONS IN: DNA-dependent ATPase activity, DNA binding, ATP binding; INVOLVED IN: cell proliferation, DNA-dependent DNA replication initiation, DNA unwinding involved in replication; LOCATED IN: nuclear chromatin; EXPRESSED IN: shoot apex; EXPRESSED DURING: IL.00 inflorescence just visible; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 6 (InterPro:IPR008049); BEST Arabidopsis thaliana protein match is: Minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT2G16440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q43704|mcm3_maize : 281.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 1558.0) &  (original description: no original description)","protein_coding"
"Kfl00030_0270","kfl00030_0270_v1.1","Klebsormidium nitens","(at5g66750 : 640.0) Protein is similar to SWI2/SNF2 chromatin remodeling proteins. DDM1 is appears to act as a chromatin-remodeling ATPase involved in cytosine methylation in CG and non-CG contexts. Involved in gene silencing and maintenance of DNA methylation and histone methylation. Hypomethylation of many genomic regions occurs in ddm1 mutants, and can cause several phenotypic abnormalities, but some loci, such as BONSAI (At1g73177) can be hypermethylated in ddm1 mutants after several generations, leading to different phenotypes. DDM1 might be involved in establishing a heterochromain boundary. A line expressing an RNAi targeted against DDM1  shows some resistance to agrobacterium-mediated root transformation.; chromatin remodeling 1 (CHR1); FUNCTIONS IN: helicase activity, ATPase activity; INVOLVED IN: methylation-dependent chromatin silencing, DNA mediated transformation, transposition, RNA-mediated; LOCATED IN: nucleosome; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor17 (TAIR:AT5G18620.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 439.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1280.0) &  (original description: no original description)","protein_coding"
"Kfl00032_0360","kfl00032_0360_v1.1","Klebsormidium nitens","(at3g56490 : 174.0) Encodes a protein that has adenylylsulfate sulfohydrolase activity (E.C. 3.6.2.1) in vitro.; HIS triad family protein 3 (HIT3); FUNCTIONS IN: protein kinase C binding, adenylylsulfatase activity, zinc ion binding; INVOLVED IN: sulfur metabolic process, purine ribonucleotide metabolic process; LOCATED IN: peroxisome, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidine triad-like motif (InterPro:IPR011146), Histidine triad, conserved site (InterPro:IPR019808), Histidine triad (HIT) protein (InterPro:IPR001310), Histidine triad motif (InterPro:IPR011151); BEST Arabidopsis thaliana protein match is: HISTIDINE TRIAD NUCLEOTIDE-BINDING 2 (TAIR:AT1G31160.1); Has 7957 Blast hits to 7956 proteins in 2592 species: Archae - 148; Bacteria - 4849; Metazoa - 343; Fungi - 139; Plants - 127; Viruses - 0; Other Eukaryotes - 2351 (source: NCBI BLink). & (p42856|zb14_maize : 174.0) 14 kDa zinc-binding protein (Protein kinase C inhibitor) (PKCI) - Zea mays (Maize) & (reliability: 348.0) &  (original description: no original description)","protein_coding"
"Kfl00033_0050","kfl00033_0050_v1.1","Klebsormidium nitens","(at4g24710 : 451.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; EXPRESSED IN: shoot apex, embryo, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960), Chaperonin clpA/B (InterPro:IPR001270); BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein (TAIR:AT3G53230.1); Has 23595 Blast hits to 21814 proteins in 2884 species: Archae - 1432; Bacteria - 8057; Metazoa - 4130; Fungi - 3211; Plants - 2291; Viruses - 16; Other Eukaryotes - 4458 (source: NCBI BLink). & (reliability: 902.0) &  (original description: no original description)","protein_coding"
"Kfl00033_0310","kfl00033_0310_v1.1","Klebsormidium nitens","(at2g16440 : 825.0) MINICHROMOSOME MAINTENANCE 4 (MCM4); FUNCTIONS IN: nucleoside-triphosphatase activity, DNA-dependent ATPase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: cell proliferation, DNA-dependent DNA replication initiation, DNA unwinding involved in replication; LOCATED IN: nuclear chromatin; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), ATPase, AAA+ type, core (InterPro:IPR003593), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 4 (InterPro:IPR008047); BEST Arabidopsis thaliana protein match is: minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT5G44635.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q43704|mcm3_maize : 290.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 1650.0) &  (original description: no original description)","protein_coding"
"Kfl00036_0130","kfl00036_0130_v1.1","Klebsormidium nitens","(at5g38360 : 192.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 14 (TAIR:AT1G33990.1); Has 2073 Blast hits to 2071 proteins in 500 species: Archae - 14; Bacteria - 1119; Metazoa - 146; Fungi - 52; Plants - 356; Viruses - 0; Other Eukaryotes - 386 (source: NCBI BLink). & (reliability: 384.0) &  (original description: no original description)","protein_coding"
"Kfl00037_0040","kfl00037_0040_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00038_0280","kfl00038_0280_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00040_0100","kfl00040_0100_v1.1","Klebsormidium nitens","(at5g57950 : 139.0) 26S proteasome regulatory subunit, putative; CONTAINS InterPro DOMAIN/s: PDZ/DHR/GLGF (InterPro:IPR001478); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 278.0) &  (original description: no original description)","protein_coding"
"Kfl00040_0110","kfl00040_0110_v1.1","Klebsormidium nitens","(at5g35750 : 167.0) Encodes histidine kinase AHK2.; histidine kinase 2 (HK2); FUNCTIONS IN: osmosensor activity, cytokinin receptor activity, protein histidine kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 3 (TAIR:AT1G27320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o49230|etr1_braol : 125.0) Ethylene receptor (EC 2.7.13.3) - Brassica oleracea (Wild cabbage) & (reliability: 334.0) &  (original description: no original description)","protein_coding"
"Kfl00040_0160","kfl00040_0160_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00042_0220","kfl00042_0220_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00043_0150","kfl00043_0150_v1.1","Klebsormidium nitens","(at4g34570 : 494.0) Encodes a bifunctional dihydrofolate reductase - thymidylate synthase gene. This is unique in Arabidopsis and protozoa. Other organisms have independent genes for this function.; thymidylate synthase 2 (THY-2); CONTAINS InterPro DOMAIN/s: Thymidylate synthase, active site (InterPro:IPR020940), Dihydrofolate reductase domain (InterPro:IPR001796), Dihydrofolate reductase conserved site (InterPro:IPR017925), Bifunctional dihydrofolate reductase/thymidylate synthase (InterPro:IPR012262), Thymidylate synthase (InterPro:IPR000398); BEST Arabidopsis thaliana protein match is: thymidylate synthase 1 (TAIR:AT2G16370.1); Has 13567 Blast hits to 13544 proteins in 2627 species: Archae - 73; Bacteria - 8801; Metazoa - 517; Fungi - 428; Plants - 92; Viruses - 256; Other Eukaryotes - 3400 (source: NCBI BLink). & (o81395|drts_maize : 493.0) Bifunctional dihydrofolate reductase-thymidylate synthase (DHFR-TS) [Includes: Dihydrofolate reductase (EC 1.5.1.3); Thymidylate synthase (EC 2.1.1.45)] - Zea mays (Maize) & (reliability: 974.0) &  (original description: no original description)","protein_coding"
"Kfl00044_0070","kfl00044_0070_v1.1","Klebsormidium nitens","(at4g10610 : 313.0) RNA-binding protein, putative. Member of a family of proteins having an PABC binding domain (PAM motif).; RNA-BINDING PROTEIN 37 (RBP37); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ataxin-2, C-terminal (InterPro:IPR009818); BEST Arabidopsis thaliana protein match is: CTC-interacting domain 11 (TAIR:AT1G32790.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 626.0) &  (original description: no original description)","protein_coding"
"Kfl00044_g7","kfl00044_g7_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00045_0200","kfl00045_0200_v1.1","Klebsormidium nitens","(at3g05480 : 323.0) Involved in the regulation of DNA damage repair and homologous recombination.; RAD9; CONTAINS InterPro DOMAIN/s: Rad9 (InterPro:IPR007268), Cell cycle checkpoint, RAD9 (InterPro:IPR016552). & (reliability: 646.0) &  (original description: no original description)","protein_coding"
"Kfl00045_0210","kfl00045_0210_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00045_0380","kfl00045_0380_v1.1","Klebsormidium nitens","(at5g63420 : 749.0) embryo defective 2746 (emb2746); FUNCTIONS IN: hydrolase activity, DNA binding, catalytic activity; INVOLVED IN: metabolic process, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), RNA-metabolising metallo-beta-lactamase (InterPro:IPR011108), Beta-lactamase-like (InterPro:IPR001279), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G38250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1498.0) &  (original description: no original description)","protein_coding"
"Kfl00046_0010","kfl00046_0010_v1.1","Klebsormidium nitens","(at2g29680 : 209.0) Encodes cell division control protein 6 (CDC6).; cell division control 6 (CDC6); FUNCTIONS IN: ATP binding; INVOLVED IN: regulation of cell cycle, DNA replication; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), CDC6, C-terminal (InterPro:IPR015163), Cell division control, Cdc6 (InterPro:IPR016314); BEST Arabidopsis thaliana protein match is: Cell division control, Cdc6 (TAIR:AT1G07270.1); Has 1385 Blast hits to 1377 proteins in 339 species: Archae - 397; Bacteria - 0; Metazoa - 348; Fungi - 289; Plants - 116; Viruses - 0; Other Eukaryotes - 235 (source: NCBI BLink). & (reliability: 418.0) &  (original description: no original description)","protein_coding"
"Kfl00049_0150","kfl00049_0150_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00050_0090","kfl00050_0090_v1.1","Klebsormidium nitens","(at3g17590 : 233.0) Encodes the Arabidopsis homologue of yeast SNF5 and represents a conserved subunit of plant SWI/SNF complexes.; BUSHY GROWTH (BSH); CONTAINS InterPro DOMAIN/s: SNF5/SMARCB1/INI1 (InterPro:IPR006939). & (reliability: 466.0) &  (original description: no original description)","protein_coding"
"Kfl00051_0100","kfl00051_0100_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00052_0340","kfl00052_0340_v1.1","Klebsormidium nitens","(at5g22110 : 456.0) Encodes a protein with similarity to DNA polymerase epsilon subunit B an essential gene that is required for DNA replication. Homozygous mutants are embryo lethal. Expressed in meristematic , rapidly dividing regions.; DNA polymerase epsilon subunit B2 (DPB2); FUNCTIONS IN: DNA-directed DNA polymerase activity, DNA binding; INVOLVED IN: DNA replication, DNA-dependent DNA replication; LOCATED IN: epsilon DNA polymerase complex, nucleus; EXPRESSED IN: embryo, male gametophyte, apical meristem, female gametophyte; CONTAINS InterPro DOMAIN/s: DNA polymerase epsilon, subunit B (InterPro:IPR016266), DNA polymerase alpha/epsilon, subunit B (InterPro:IPR007185); Has 412 Blast hits to 394 proteins in 202 species: Archae - 0; Bacteria - 0; Metazoa - 125; Fungi - 144; Plants - 62; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 912.0) &  (original description: no original description)","protein_coding"
"Kfl00054_0150","kfl00054_0150_v1.1","Klebsormidium nitens","(at4g32060 : 300.0) calcium-binding EF hand family protein; FUNCTIONS IN: calcium ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); Has 1096 Blast hits to 1078 proteins in 164 species: Archae - 0; Bacteria - 0; Metazoa - 829; Fungi - 82; Plants - 97; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink). & (reliability: 600.0) &  (original description: no original description)","protein_coding"
"Kfl00054_0235","kfl00054_0235_v1.1","Klebsormidium nitens","(at5g42480 : 110.0) Shows homology to the cyanobacterial cell division protein Ftn2, mutant only has two mesophyll cell chloroplasts.  Protein was localized to a ring at the center of the chloroplasts. Probably involved in functions in the assembly and/or stabilization of the plastid-dividing FtsZ ring, inhibiting FtsZ filament formation in the chloroplast.; ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6 (ARC6); FUNCTIONS IN: protein binding; INVOLVED IN: protein folding, chloroplast fission, chloroplast organization; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: paralog of ARC6 (TAIR:AT3G19180.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 220.0) &  (original description: no original description)","protein_coding"
"Kfl00054_0350","kfl00054_0350_v1.1","Klebsormidium nitens","(at1g52510 : 145.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G12830.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 290.0) &  (original description: no original description)","protein_coding"
"Kfl00054_g48","kfl00054_g48_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00058_0160","kfl00058_0160_v1.1","Klebsormidium nitens","(at2g17972 : 80.9) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; Has 34 Blast hits to 34 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 161.8) &  (original description: no original description)","protein_coding"
"Kfl00061_0310","kfl00061_0310_v1.1","Klebsormidium nitens","(q9axa6|abil1_orysa : 112.0) Probable protein ABIL1 (Abl interactor-like protein 1) - Oryza sativa (Rice) & (at2g46225 : 103.0) Encodes a subunit of the WAVE complex. The WAVE complex is required for activation of ARP2/3 complex which functions in actin microfilament nucleation and branching.  One of four ABI-like proteins.; ABI-1-like 1 (ABIL1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: actin nucleation, trichome morphogenesis; LOCATED IN: SCAR complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: ABL interactor-like protein 3 (TAIR:AT5G24310.1). & (reliability: 206.0) &  (original description: no original description)","protein_coding"
"Kfl00063_0300","kfl00063_0300_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00066_0200","kfl00066_0200_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00067_0060","kfl00067_0060_v1.1","Klebsormidium nitens","(at2g01120 : 291.0) Origin Recognition Complex subunit 4. Involved in the initiation of DNA replication. Regulated transcriptionally during cell cycle, peaking at G1/S-phase. Target of E2F/DF family of transcription factors. Interacts with all ORC subunits except ORC1b.; origin recognition complex subunit 4 (ORC4); CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), Origin recognition complex, subunit 4 (InterPro:IPR016527). & (reliability: 582.0) &  (original description: no original description)","protein_coding"
"Kfl00069_0160","kfl00069_0160_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00071_0240","kfl00071_0240_v1.1","Klebsormidium nitens","(q8m9w1|ycf3_chagl : 301.0) Photosystem I assembly protein ycf3 - Chaetosphaeridium globosum & (atcg00360 : 216.0) Encodes a protein required for photosystem I assembly and stability. In Chlamydomonas reinhardtii, this protein seems to act as a PSI specific chaperone facilitating the assembly of the complex by interacting with PsaA and PsaD. A loss of function mutation in tobacco leads to a loss of photosystem I.; YCF3; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G11540.1). & (reliability: 432.0) &  (original description: no original description)","protein_coding"
"Kfl00076_0270","kfl00076_0270_v1.1","Klebsormidium nitens","(at2g32240 : 110.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G05320.3); Has 470429 Blast hits to 168274 proteins in 4282 species: Archae - 6896; Bacteria - 131956; Metazoa - 175525; Fungi - 33166; Plants - 25441; Viruses - 2243; Other Eukaryotes - 95202 (source: NCBI BLink). & (reliability: 212.0) &  (original description: no original description)","protein_coding"
"Kfl00079_0040","kfl00079_0040_v1.1","Klebsormidium nitens","(at1g78930 : 102.0) Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT2G21710.1); Has 1485 Blast hits to 916 proteins in 85 species: Archae - 0; Bacteria - 0; Metazoa - 111; Fungi - 0; Plants - 1282; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). & (reliability: 204.0) &  (original description: no original description)","protein_coding"
"Kfl00080_0200","kfl00080_0200_v1.1","Klebsormidium nitens","(at1g70210 : 131.0) Encodes a D-type cyclin that physically interacts with CDC2A.  Its expression is upregulated early during germination.; CYCLIN D1;1 (CYCD1;1); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: G1 phase of mitotic cell cycle, regulation of cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin D2;1 (TAIR:AT2G22490.1); Has 3455 Blast hits to 3453 proteins in 343 species: Archae - 0; Bacteria - 0; Metazoa - 1586; Fungi - 382; Plants - 1073; Viruses - 13; Other Eukaryotes - 401 (source: NCBI BLink). & (reliability: 262.0) &  (original description: no original description)","protein_coding"
"Kfl00080_0230","kfl00080_0230_v1.1","Klebsormidium nitens","(at5g61530 : 98.2) small G protein family protein / RhoGAP family protein; FUNCTIONS IN: Rho GTPase activator activity; INVOLVED IN: signal transduction; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rho GTPase activation protein (InterPro:IPR008936), RhoGAP (InterPro:IPR000198). & (reliability: 196.4) &  (original description: no original description)","protein_coding"
"Kfl00080_0300","kfl00080_0300_v1.1","Klebsormidium nitens","(at1g11880 : 296.0) transferases, transferring hexosyl groups; FUNCTIONS IN: transferase activity, transferring hexosyl groups; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: integral to membrane, endoplasmic reticulum membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Mannosyltransferase, PIG-V (InterPro:IPR007315); Has 490 Blast hits to 469 proteins in 237 species: Archae - 6; Bacteria - 111; Metazoa - 123; Fungi - 146; Plants - 40; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink). & (reliability: 592.0) &  (original description: no original description)","protein_coding"
"Kfl00081_0190","kfl00081_0190_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00086_0380","kfl00086_0380_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00105_0055","kfl00105_0055_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00106_0110","kfl00106_0110_v1.1","Klebsormidium nitens","(at5g13690 : 784.0) Encodes an enzyme that is predicted to act as an alpha-N-acetylglucosaminidase (NAGLU). An naglu mutant arrests early in seed development but does not appear to have male or female gametophytic defects. Transcript levels for this gene are increased during reproductive development.; CYCLOPS 1 (CYL1); FUNCTIONS IN: alpha-N-acetylglucosaminidase activity; INVOLVED IN: seed development; LOCATED IN: vacuole; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-N-acetylglucosaminidase (InterPro:IPR007781); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1568.0) &  (original description: no original description)","protein_coding"
"Kfl00109_0010","kfl00109_0010_v1.1","Klebsormidium nitens","(at1g66590 : 114.0) cytochrome c oxidase 19-1 (COX19-1); CONTAINS InterPro DOMAIN/s: CHCH (InterPro:IPR010625); BEST Arabidopsis thaliana protein match is: cytochrome c oxidase 19-2 (TAIR:AT1G69750.1); Has 290 Blast hits to 290 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 77; Fungi - 106; Plants - 52; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). & (reliability: 228.0) &  (original description: no original description)","protein_coding"
"Kfl00112_0110","kfl00112_0110_v1.1","Klebsormidium nitens","(at5g49650 : 596.0) Encodes a cytosolic protein capable of phosphorylating xylulose and deoxy-xylulose. It most likely plays a role in producing precursors for isoprenoid biosynthesis.; xylulose kinase-2 (XK-2); FUNCTIONS IN: xylulokinase activity; INVOLVED IN: xylulose metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate kinase, FGGY (InterPro:IPR000577), Carbohydrate kinase, FGGY, N-terminal (InterPro:IPR018484), Carbohydrate kinase, FGGY, C-terminal (InterPro:IPR018485); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1192.0) &  (original description: no original description)","protein_coding"
"Kfl00114_0080","kfl00114_0080_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00121_0170","kfl00121_0170_v1.1","Klebsormidium nitens","(at5g54260 : 676.0) DNA repair and meiotic recombination protein, component of MRE11 complex with RAD50 and NBS1; MEIOTIC RECOMBINATION 11 (MRE11); FUNCTIONS IN: hydrolase activity, manganese ion binding, protein serine/threonine phosphatase activity, exonuclease activity, endonuclease activity; INVOLVED IN: double-strand break repair, DNA metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), DNA repair exonuclease (InterPro:IPR003701), Mre11, DNA-binding (InterPro:IPR007281); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1352.0) &  (original description: no original description)","protein_coding"
"Kfl00125_0090","kfl00125_0090_v1.1","Klebsormidium nitens","(at2g34570 : 140.0) maternal effect embryo arrest 21 (MEE21); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF652 (InterPro:IPR006984); Has 718 Blast hits to 716 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 246; Fungi - 251; Plants - 108; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (reliability: 280.0) &  (original description: no original description)","protein_coding"
"Kfl00125_0130","kfl00125_0130_v1.1","Klebsormidium nitens","(at1g63660 : 770.0) GMP synthase (glutamine-hydrolyzing), putative / glutamine amidotransferase, putative; FUNCTIONS IN: asparagine synthase (glutamine-hydrolyzing) activity, GMP synthase (glutamine-hydrolyzing) activity, catalytic activity, ATP binding; INVOLVED IN: GMP biosynthetic process, glutamine metabolic process, biosynthetic process, asparagine biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Glutamine amidotransferase superfamily (InterPro:IPR011702), GMP synthase, N-terminal (InterPro:IPR004739), Glutamine amidotransferase type 1 (InterPro:IPR017926), Asparagine synthase (InterPro:IPR001962), Anthranilate synthase component II/delta crystallin (InterPro:IPR006220); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1540.0) &  (original description: no original description)","protein_coding"
"Kfl00128_0250","kfl00128_0250_v1.1","Klebsormidium nitens","(at5g43080 : 138.0) Cyclin A3;1 (CYCA3;1); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin (InterPro:IPR006670), G2/mitotic-specific cyclin A (InterPro:IPR015453), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400); BEST Arabidopsis thaliana protein match is: cyclin-dependent protein kinase 3;2 (TAIR:AT1G47210.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p25010|ccnal_dauca : 132.0) G2/mitotic-specific cyclin C13-1 (A-like cyclin) (Fragment) - Daucus carota (Carrot) & (reliability: 276.0) &  (original description: no original description)","protein_coding"
"Kfl00130_0110","kfl00130_0110_v1.1","Klebsormidium nitens","(at4g28030 : 118.0) Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G06025.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 236.0) &  (original description: no original description)","protein_coding"
"Kfl00130_0130","kfl00130_0130_v1.1","Klebsormidium nitens","(at5g27740 : 530.0) A locus involved in embryogenesis. Mutations in this locus result in embryo lethality.; EMBRYO DEFECTIVE 2775 (EMB2775); FUNCTIONS IN: nucleoside-triphosphatase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), DNA polymerase III, clamp-loader complex, subunit E, C-terminal (InterPro:IPR019483), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921); BEST Arabidopsis thaliana protein match is: ATPase family associated with various cellular activities (AAA)  (TAIR:AT1G21690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1060.0) &  (original description: no original description)","protein_coding"
"Kfl00130_0230","kfl00130_0230_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00130_0240","kfl00130_0240_v1.1","Klebsormidium nitens","(p09342|ilv1_tobac : 221.0) Acetolactate synthase 1, chloroplast precursor (EC 2.2.1.6) (Acetolactate synthase I) (Acetohydroxy-acid synthase I) (ALS I) - Nicotiana tabacum (Common tobacco) & (at3g48560 : 208.0) Catalyzes the formation of acetolactate from pyruvate, the first step in valine and isoleucine biosynthesis. Requires FAD, thiamine pyrophosphate and Mg. Inhibited by the sulphonylurea herbicide, chlorsulphuron, and the imidazolinone herbicide, imazapyr.  The obtained crystal structure of acetohydroxyacid synthase AHAS, EC 2.2.1.6)in complex with herbicides of the sulphonylurea and imidazolinone family reveals the molecular basis for substrate/inhibitor binding.; chlorsulfuron/imidazolinone resistant 1 (CSR1); FUNCTIONS IN: acetolactate synthase activity, pyruvate decarboxylase activity; INVOLVED IN: branched chain family amino acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TPP-binding enzyme, conserved site (InterPro:IPR000399), Thiamine pyrophosphate enzyme, central domain (InterPro:IPR012000), Acetolactate synthase, large subunit, biosynthetic (InterPro:IPR012846), Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain (InterPro:IPR012001), Thiamine pyrophosphate enzyme, C-terminal TPP-binding (InterPro:IPR011766); BEST Arabidopsis thaliana protein match is: Thiamine pyrophosphate dependent pyruvate decarboxylase family protein (TAIR:AT5G17380.1); Has 30963 Blast hits to 30605 proteins in 2694 species: Archae - 488; Bacteria - 17421; Metazoa - 266; Fungi - 871; Plants - 599; Viruses - 25; Other Eukaryotes - 11293 (source: NCBI BLink). & (reliability: 416.0) &  (original description: no original description)","protein_coding"
"Kfl00131_0130","kfl00131_0130_v1.1","Klebsormidium nitens","(at5g36880 : 908.0) Encodes a plastidic acetyl-coA synthetase. This enzyme plays a role in converting acetate to acetyl-coA in the plastids. It does not appear to be a major contributor to  fatty acid biosynthesis based on mutant phenotypes. The enzyme seems to act as a monomer and may play an important role  in preventing the toxic accumulation of fermentation products including acetaldehyde, acetate, and ethanol. It participates in  the pyruvate dehydrogenase bypass pathway; acetyl-CoA synthetase (ACS); FUNCTIONS IN: acetate-CoA ligase activity; INVOLVED IN: metabolic process, acetate metabolic process; LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acetate--CoA ligase (InterPro:IPR011904), AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl-activating enzyme 17 (TAIR:AT5G23050.1); Has 68981 Blast hits to 63577 proteins in 3326 species: Archae - 1100; Bacteria - 43606; Metazoa - 2469; Fungi - 2489; Plants - 1499; Viruses - 1; Other Eukaryotes - 17817 (source: NCBI BLink). & (p14913|4cl2_petcr : 116.0) 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) - Petroselinum crispum (Parsley) (Petroselinum hortense) & (reliability: 1816.0) &  (original description: no original description)","protein_coding"
"Kfl00136_0130","kfl00136_0130_v1.1","Klebsormidium nitens","(o24164|ppom_tobac : 388.0) Protoporphyrinogen oxidase, mitochondrial (EC 1.3.3.4) (PPO II) (Protoporphyrinogen IX oxidase isozyme II) (PPX II) (PX-2) - Nicotiana tabacum (Common tobacco) & (at5g14220 : 383.0) Encodes PPO2, a putative protoporphyrinogen oxidase based on sequence homology.  Also known as MEE61 (maternal effect embryo arrest 61).  mee61 mutant shows arrested endosperm development.; HEMG2; FUNCTIONS IN: oxygen-dependent protoporphyrinogen oxidase activity; INVOLVED IN: porphyrin biosynthetic process, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Adrenodoxin reductase (InterPro:IPR000759), Protoporphyrinogen oxidase (InterPro:IPR004572); BEST Arabidopsis thaliana protein match is: Flavin containing amine oxidoreductase family (TAIR:AT4G01690.1). & (reliability: 766.0) &  (original description: no original description)","protein_coding"
"Kfl00147_0270","kfl00147_0270_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00153_0120","kfl00153_0120_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00154_0140","kfl00154_0140_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00155_0060","kfl00155_0060_v1.1","Klebsormidium nitens","(at1g80460 : 590.0) Encodes a protein similar to glycerol kinase, which converts glycerol to glycerol 3-phosphate and performs a rate-limiting step in glycerol metabolism. This gene is required for both general and specific resistance against bacteria and fungi. Arabidopsis thaliana glycerol kinase (GLR1) mRNA.Involved in flagellin-induced non-host resistance to Pseudomonas. Coronatine partially suppresses flagellin-induced expression of NHO1.; nonhost resistance to P. s. phaseolicola 1 (NHO1); CONTAINS InterPro DOMAIN/s: Carbohydrate kinase, FGGY, conserved site (InterPro:IPR018483), Glycerol kinase (InterPro:IPR005999), Carbohydrate kinase, FGGY (InterPro:IPR000577), Carbohydrate kinase, FGGY, N-terminal (InterPro:IPR018484), Carbohydrate kinase, FGGY, C-terminal (InterPro:IPR018485); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1180.0) &  (original description: no original description)","protein_coding"
"Kfl00158_0100","kfl00158_0100_v1.1","Klebsormidium nitens","(at5g54160 : 158.0) A caffeic acid/5-hydroxyferulic acid O-methyltransferase. Interacts with 14-4-3 proteins in yeast 2 hybrid assay.  AtOMT1 (At5g54160) encodes a flavonol 3í-O-methyltransferase that is highly active towards quercetin and myricetin. The substrate specificity identifies the enzyme as flavonol 3í-methyltransferase which replaces the former annotation of the gene to encode a caffeic acid/5-hydroxyferulic acid O-methyltransferase; O-methyltransferase 1 (OMT1); FUNCTIONS IN: myricetin 3'-O-methyltransferase activity, quercetin 3-O-methyltransferase activity, caffeate O-methyltransferase activity; INVOLVED IN: lignin biosynthetic process, flavonol biosynthetic process; LOCATED IN: cytosol, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT1G77520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o82054|comt1_sacof : 157.0) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68) (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) - Saccharum officinarum (Sugarcane) & (reliability: 304.0) &  (original description: no original description)","protein_coding"
"Kfl00163_0110","kfl00163_0110_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00164_0030","kfl00164_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00165_0140","kfl00165_0140_v1.1","Klebsormidium nitens","(at4g29910 : 184.0) Origin Recognition Complex subunit 5. Involved in the initiation of DNA replication. Interacts strongly with all ORC subunits.; origin recognition complex protein 5 (ORC5); CONTAINS InterPro DOMAIN/s: Origin recognition complex, subunit 5 (InterPro:IPR020796); Has 287 Blast hits to 283 proteins in 127 species: Archae - 0; Bacteria - 0; Metazoa - 140; Fungi - 92; Plants - 43; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 368.0) &  (original description: no original description)","protein_coding"
"Kfl00168_0060","kfl00168_0060_v1.1","Klebsormidium nitens","(at5g03910 : 398.0) member of ATH subfamily; ABC2 homolog 12 (ATH12); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 14 (TAIR:AT1G28010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q6yuu5|mdr_orysa : 221.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 796.0) &  (original description: no original description)","protein_coding"
"Kfl00168_0120","kfl00168_0120_v1.1","Klebsormidium nitens","(at3g48000 : 408.0) Encodes a putative (NAD+) aldehyde dehydrogenase.; aldehyde dehydrogenase 2B4 (ALDH2B4); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, aldehyde dehydrogenase (NAD) activity, ATP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 2B7 (TAIR:AT1G23800.1); Has 61695 Blast hits to 61296 proteins in 3003 species: Archae - 476; Bacteria - 35240; Metazoa - 2662; Fungi - 2127; Plants - 1668; Viruses - 0; Other Eukaryotes - 19522 (source: NCBI BLink). & (o24174|badh_orysa : 327.0) Betaine-aldehyde dehydrogenase (EC 1.2.1.8) (BADH) - Oryza sativa (Rice) & (reliability: 816.0) &  (original description: no original description)","protein_coding"
"Kfl00173_0240","kfl00173_0240_v1.1","Klebsormidium nitens","(q9zrj4|tba_chlvu : 789.0) Tubulin alpha chain - Chlorella vulgaris (Green alga) & (at4g14960 : 781.0) Encodes an alpha-tubulin isoform required for right handed helical growth.; TUA6; FUNCTIONS IN: protein binding, structural constituent of cytoskeleton; INVOLVED IN: response to salt stress, microtubule cytoskeleton organization, cellular response to gravity; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Alpha tubulin (InterPro:IPR002452), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: tubulin alpha-2 chain (TAIR:AT1G50010.1); Has 22664 Blast hits to 22566 proteins in 4681 species: Archae - 4; Bacteria - 25; Metazoa - 4398; Fungi - 13427; Plants - 1532; Viruses - 0; Other Eukaryotes - 3278 (source: NCBI BLink). & (reliability: 1562.0) &  (original description: no original description)","protein_coding"
"Kfl00175_0130","kfl00175_0130_v1.1","Klebsormidium nitens","(at5g03690 : 550.0) Aldolase superfamily protein; FUNCTIONS IN: fructose-bisphosphate aldolase activity, catalytic activity; INVOLVED IN: pentose-phosphate shunt; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT2G36460.1); Has 5010 Blast hits to 5004 proteins in 974 species: Archae - 0; Bacteria - 706; Metazoa - 1412; Fungi - 8; Plants - 478; Viruses - 0; Other Eukaryotes - 2406 (source: NCBI BLink). & (p17784|alf_orysa : 546.0) Fructose-bisphosphate aldolase cytoplasmic isozyme (EC 4.1.2.13) (Gravity-specific protein GSC 233) - Oryza sativa (Rice) & (reliability: 1076.0) &  (original description: no original description)","protein_coding"
"Kfl00175_0230","kfl00175_0230_v1.1","Klebsormidium nitens","(p21727|tpt_pea : 338.0) Triose phosphate/phosphate translocator, chloroplast precursor (cTPT) (p36) (E30) - Pisum sativum (Garden pea) & (at5g46110 : 333.0) mutant has Altered acclimation responses; Chloroplast Triose Phosphate Translocator; ACCLIMATION OF PHOTOSYNTHESIS TO  ENVIRONMENT 2 (APE2); FUNCTIONS IN: antiporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853), Tpt phosphate/phosphoenolpyruvate translocator (InterPro:IPR004696); BEST Arabidopsis thaliana protein match is: glucose 6-phosphate/phosphate translocator 1 (TAIR:AT5G54800.1); Has 2560 Blast hits to 2558 proteins in 418 species: Archae - 2; Bacteria - 316; Metazoa - 499; Fungi - 419; Plants - 1040; Viruses - 0; Other Eukaryotes - 284 (source: NCBI BLink). & (reliability: 666.0) &  (original description: no original description)","protein_coding"
"Kfl00176_0020","kfl00176_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00177_0290","kfl00177_0290_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00177_0300","kfl00177_0300_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00179_0170","kfl00179_0170_v1.1","Klebsormidium nitens","(p47917|zrp4_maize : 89.7) O-methyltransferase ZRP4 (EC 2.1.1.-) (OMT) - Zea mays (Maize) & (at1g51990 : 88.6) O-methyltransferase family protein; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase 1 (TAIR:AT5G54160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 177.2) &  (original description: no original description)","protein_coding"
"Kfl00188_0050","kfl00188_0050_v1.1","Klebsormidium nitens","(at1g67080 : 180.0) Encodes a protein involved in the photoprotection of PSII. An aba4-1 mutant completely lacks neoxanthin,a component of the chromophore of the peripheral antenna system in PSII. ABA4 is required for neoxanthin biosynthesis, an intermediary step in abscisic acid biosynthesis, but no catalytic activity has been detected for the ABA4 protein.; abscisic acid (ABA)-deficient 4 (ABA4); INVOLVED IN: abscisic acid biosynthetic process, regulation of superoxide anion generation, xanthophyll metabolic process, photoprotection; LOCATED IN: PSII associated light-harvesting complex II, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 723 Blast hits to 723 proteins in 64 species: Archae - 0; Bacteria - 78; Metazoa - 0; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 587 (source: NCBI BLink). & (reliability: 360.0) &  (original description: no original description)","protein_coding"
"Kfl00201_0050","kfl00201_0050_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00205_0100","kfl00205_0100_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00210_0070","kfl00210_0070_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00222_0050","kfl00222_0050_v1.1","Klebsormidium nitens","(at1g67480 : 107.0) Galactose oxidase/kelch repeat superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G27420.1); Has 11510 Blast hits to 6062 proteins in 581 species: Archae - 21; Bacteria - 896; Metazoa - 8265; Fungi - 112; Plants - 1475; Viruses - 165; Other Eukaryotes - 576 (source: NCBI BLink). & (reliability: 214.0) &  (original description: no original description)","protein_coding"
"Kfl00222_0060","kfl00222_0060_v1.1","Klebsormidium nitens","(at5g40280 : 269.0) encodes a beta subunit of farnesyl-trans-transferase, which is involved in meristem organization and ABA-mediated signal transduction pathway. Mutant phenotypes have been observed in meristem organization, and response to abscisic acid and drought.; ENHANCED RESPONSE TO ABA 1 (ERA1); CONTAINS InterPro DOMAIN/s: Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: RAB geranylgeranyl transferase beta subunit 2 (TAIR:AT3G12070.2); Has 2257 Blast hits to 1610 proteins in 263 species: Archae - 4; Bacteria - 30; Metazoa - 707; Fungi - 630; Plants - 303; Viruses - 4; Other Eukaryotes - 579 (source: NCBI BLink). & (q04903|pftb_pea : 257.0) Protein farnesyltransferase subunit beta (EC 2.5.1.58) (CAAX farnesyltransferase subunit beta) (RAS proteins prenyltransferase beta) (FTase-beta) - Pisum sativum (Garden pea) & (reliability: 538.0) &  (original description: no original description)","protein_coding"
"Kfl00223_0080","kfl00223_0080_v1.1","Klebsormidium nitens","(at5g07590 : 518.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); Has 672 Blast hits to 646 proteins in 166 species: Archae - 0; Bacteria - 97; Metazoa - 271; Fungi - 156; Plants - 85; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink). & (reliability: 1036.0) &  (original description: no original description)","protein_coding"
"Kfl00223_0140","kfl00223_0140_v1.1","Klebsormidium nitens","(p29500|tbb1_pea : 206.0) Tubulin beta-1 chain (Beta-1 tubulin) - Pisum sativum (Garden pea) & (at1g20010 : 202.0) beta tubulin; tubulin beta-5 chain (TUB5); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: microtubule-based process; LOCATED IN: tubulin complex, cell wall, plasma membrane, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta tubulin (InterPro:IPR002453), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Beta tubulin, autoregulation binding site (InterPro:IPR013838), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: tubulin beta-1 chain (TAIR:AT1G75780.1); Has 23676 Blast hits to 23579 proteins in 4895 species: Archae - 37; Bacteria - 47; Metazoa - 4468; Fungi - 14216; Plants - 1551; Viruses - 0; Other Eukaryotes - 3357 (source: NCBI BLink). & (reliability: 404.0) &  (original description: no original description)","protein_coding"
"Kfl00224_0070","kfl00224_0070_v1.1","Klebsormidium nitens","(at4g02485 : 135.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G31600.2); Has 487 Blast hits to 486 proteins in 165 species: Archae - 0; Bacteria - 93; Metazoa - 167; Fungi - 38; Plants - 88; Viruses - 3; Other Eukaryotes - 98 (source: NCBI BLink). & (reliability: 270.0) &  (original description: no original description)","protein_coding"
"Kfl00237_0040","kfl00237_0040_v1.1","Klebsormidium nitens","(at5g53460 : 2969.0) NADH-dependent glutamate synthase; NADH-dependent glutamate synthase 1 (GLT1); CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Glutamine amidotransferase, class-II (InterPro:IPR000583), Aldolase-type TIM barrel (InterPro:IPR013785), Glutamate synthase, alpha subunit, C-terminal (InterPro:IPR002489), Glutamate synthase, NADH/NADPH, small subunit 1 (InterPro:IPR006005), Adrenodoxin reductase (InterPro:IPR000759), Fumarate reductase, C-terminal (InterPro:IPR012285), Glutamate synthase, central-N (InterPro:IPR006982), NAD(P)-binding domain (InterPro:IPR016040), Glutamate synthase, eukaryotic (InterPro:IPR012220), Alpha-helical ferredoxin (InterPro:IPR009051), Glutamate synthase, central-C (InterPro:IPR002932), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: glutamate synthase 1 (TAIR:AT5G04140.1). & (q03460|glsn_medsa : 2923.0) Glutamate synthase [NADH], chloroplast precursor (EC 1.4.1.14) (NADH-GOGAT) - Medicago sativa (Alfalfa) & (reliability: 5938.0) &  (original description: no original description)","protein_coding"
"Kfl00240_0070","kfl00240_0070_v1.1","Klebsormidium nitens","(at5g55280 : 364.0) Encodes one of two FtsZ proteins, tubulin-like proteins, in Arabidopsis.  It is involved in chloroplast division.; homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1 (FTSZ1-1); FUNCTIONS IN: protein binding, structural molecule activity; INVOLVED IN: chloroplast fission, plastid fission; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cell division protein FtsZ, N-terminal (InterPro:IPR000158), Tubulin, conserved site (InterPro:IPR017975), Cell division protein FtsZ, conserved site (InterPro:IPR020805), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: Tubulin/FtsZ family protein (TAIR:AT3G52750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 728.0) &  (original description: no original description)","protein_coding"
"Kfl00246_0080","kfl00246_0080_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00261_g20","No alias","Klebsormidium nitens","No description available","protein_coding"
"Kfl00264_0140","kfl00264_0140_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00264_0170","kfl00264_0170_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00283_0170","kfl00283_0170_v1.1","Klebsormidium nitens","(at1g52530 : 300.0) CONTAINS InterPro DOMAIN/s: Hus1-like protein (InterPro:IPR007150); Has 129 Blast hits to 128 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 57; Fungi - 10; Plants - 47; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 600.0) &  (original description: no original description)","protein_coding"
"Kfl00287_0180","kfl00287_0180_v1.1","Klebsormidium nitens","(at5g65840 : 82.4) Thioredoxin superfamily protein; FUNCTIONS IN: oxidoreductase activity, antioxidant activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT2G37240.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 164.8) &  (original description: no original description)","protein_coding"
"Kfl00301_0100","kfl00301_0100_v1.1","Klebsormidium nitens","(at1g03475 : 162.0) Encodes coproporphyrinogen III oxidase, a key enzyme in the biosynthetic pathway of chlorophyll and heme, a tetrapyrrole pathway. Mutants express cytological and molecular markers associated with the defense responses, usually activated by pathogen infection.; LESION INITIATION 2 (LIN2); FUNCTIONS IN: coproporphyrinogen oxidase activity; INVOLVED IN: tetrapyrrole biosynthetic process; LOCATED IN: apoplast, chloroplast stroma, chloroplast, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Coproporphyrinogen III oxidase (InterPro:IPR001260), Coproporphyrinogen III oxidase, conserved site (InterPro:IPR018375); BEST Arabidopsis thaliana protein match is: Coproporphyrinogen III oxidase (TAIR:AT4G03205.1); Has 4884 Blast hits to 4875 proteins in 1228 species: Archae - 0; Bacteria - 2144; Metazoa - 115; Fungi - 160; Plants - 86; Viruses - 0; Other Eukaryotes - 2379 (source: NCBI BLink). & (p35055|hem6_soybn : 160.0) Coproporphyrinogen III oxidase, chloroplast precursor (EC 1.3.3.3) (Coproporphyrinogenase) (Coprogen oxidase) - Glycine max (Soybean) & (reliability: 324.0) &  (original description: no original description)","protein_coding"
"Kfl00302_0130","kfl00302_0130_v1.1","Klebsormidium nitens","(at3g12280 : 240.0) Encodes a retinoblastoma homologue RETINOBLASTOMA-RELATED protein (RBR or RBR1). RBR controls nuclear proliferation in the female gametophyte.  Also required for correct differentiation of male gametophytic cell types.  Regulates stem cell maintenance in Arabidopsis roots. Involved in the determination of cell cycle arrest in G1 phase after sucrose starvation. RBR1 is also involved in regulation of imprinted genes. Together with MSI1 it represses the expression of MET1. This in turn activates expression of the imprinted genes FIS2 and FWA.; retinoblastoma-related 1 (RBR1); FUNCTIONS IN: transcription factor binding; INVOLVED IN: in 15 processes; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Retinoblastoma-associated protein, B-box (InterPro:IPR002719), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Retinoblastoma-associated protein, A-box (InterPro:IPR002720). & (reliability: 480.0) &  (original description: no original description)","protein_coding"
"Kfl00310_0120","kfl00310_0120_v1.1","Klebsormidium nitens","(at4g17760 : 342.0) damaged DNA binding;exodeoxyribonuclease IIIs; FUNCTIONS IN: damaged DNA binding, exodeoxyribonuclease III activity; INVOLVED IN: DNA repair; LOCATED IN: nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Repair protein Rad1/Rec1 (InterPro:IPR003021); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 684.0) &  (original description: no original description)","protein_coding"
"Kfl00337_0100","kfl00337_0100_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00340_0020","kfl00340_0020_v1.1","Klebsormidium nitens","(at4g33680 : 587.0) Involved in disease resistance against Pseudomonas syringae. mutants have elevated SA levels, a low level of spontaneous cell death, callose deposition, and enlarged cells in leaves. genetically maps on chr 4 between L23H3 and nga1139.; ABERRANT GROWTH AND DEATH 2 (AGD2); FUNCTIONS IN: transaminase activity, copper ion binding, L,L-diaminopimelate aminotransferase activity; INVOLVED IN: lysine biosynthetic process via diaminopimelate, systemic acquired resistance, salicylic acid mediated signaling pathway; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: LL-diaminopimelate aminotransferase, plant-related (InterPro:IPR019942), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: AGD2-like defense response protein 1 (TAIR:AT2G13810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1174.0) &  (original description: no original description)","protein_coding"
"Kfl00342_0030","kfl00342_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00356_0060","kfl00356_0060_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00357_0110","kfl00357_0110_v1.1","Klebsormidium nitens","(at5g52560 : 723.0) Encodes a protein with UTP:sugar 1-phosphate uridylyltransferase activity, which has been shown to use a wide range of substrates including glucose-1-P, galactose-1-P, xylose-1-P, arabinose-1-P and glucuronate-1-P. The enzyme was shown to require Mg2+ or Mn2+ for activity. Mutations in USP can lead to a complete loss of male fertility.; UDP-sugar pyrophosphorylase (USP); FUNCTIONS IN: in 6 functions; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: UTP--glucose-1-phosphate uridylyltransferase (InterPro:IPR002618); BEST Arabidopsis thaliana protein match is: N-acetylglucosamine-1-phosphate uridylyltransferase 1 (TAIR:AT1G31070.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1446.0) &  (original description: no original description)","protein_coding"
"Kfl00376_0100","kfl00376_0100_v1.1","Klebsormidium nitens","(q6es10|hat1_orysa : 137.0) Probable acetyltransferase type B catalytic subunit (EC 2.3.1.48) (HAT B) - Oryza sativa (Rice) & (at5g56740 : 130.0) Encodes an enzyme with histone acetyltransferase activity. Histone H4 is the primary substrate for the enzyme. Prior acetylation of  lysine 12 of histone H4 reduces radioactive acetylation by  HAG2. HAG2 acetylates histone H4 lysine 12.; histone acetyltransferase of the GNAT family 2 (HAG2); FUNCTIONS IN: histone acetyltransferase activity, H4 histone acetyltransferase activity; INVOLVED IN: histone acetylation, chromatin modification, chromatin silencing at telomere; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone acetyltransferase type B, catalytic subunit (InterPro:IPR017380), GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Histone acetyl transferase HAT1 N-terminal (InterPro:IPR019467); Has 368 Blast hits to 368 proteins in 193 species: Archae - 0; Bacteria - 0; Metazoa - 119; Fungi - 147; Plants - 50; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (reliability: 260.0) &  (original description: no original description)","protein_coding"
"Kfl00388_0030","kfl00388_0030_v1.1","Klebsormidium nitens","(at1g26170 : 702.0) ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus, docking; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G59020.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1404.0) &  (original description: no original description)","protein_coding"
"Kfl00411_0030","kfl00411_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00414_0030","kfl00414_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00422_0010","kfl00422_0010_v1.1","Klebsormidium nitens","(at1g44900 : 989.0) Encodes MCM2 (MINICHROMOSOME MAINTENANCE 2), a protein essential to embryo development. Overexpression results in altered root meristem function.; MINICHROMOSOME MAINTENANCE 2 (MCM2); FUNCTIONS IN: DNA-dependent ATPase activity, DNA binding, ATP binding; INVOLVED IN: in 7 processes; LOCATED IN: nuclear chromatin; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 2 (InterPro:IPR008045), MCM protein 2, N-terminal (InterPro:IPR021092); BEST Arabidopsis thaliana protein match is: Minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT2G16440.1). & (q43704|mcm3_maize : 308.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 1978.0) &  (original description: no original description)","protein_coding"
"Kfl00424_0040","kfl00424_0040_v1.1","Klebsormidium nitens","(at3g04810 : 199.0) Encodes AtNek2, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals.  Plant Neks might be involved in plant development processes.; NIMA-related kinase 2 (NEK2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: NIMA-related kinase 3 (TAIR:AT5G28290.1); Has 124376 Blast hits to 122221 proteins in 4182 species: Archae - 113; Bacteria - 14280; Metazoa - 45892; Fungi - 12262; Plants - 30619; Viruses - 487; Other Eukaryotes - 20723 (source: NCBI BLink). & (q02723|rkin1_secce : 102.0) Carbon catabolite derepressing protein kinase (EC 2.7.11.1) - Secale cereale (Rye) & (reliability: 380.0) &  (original description: no original description)","protein_coding"
"Kfl00425_0040","kfl00425_0040_v1.1","Klebsormidium nitens","(at1g80560 : 526.0) The AtIMD2 is one out of 3 genes encoding the enzyme 3-isopropylmalate dehydrogenase involved in leucine biosynthesis in Arabidopsis. Its subcellular location has been targeted to plastids.; isopropylmalate dehydrogenase 2 (IMD2); FUNCTIONS IN: 3-isopropylmalate dehydrogenase activity; INVOLVED IN: leucine biosynthetic process, metabolic process; LOCATED IN: chloroplast, chloroplast stroma, plastid, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Isopropylmalate dehydrogenase (InterPro:IPR004429), Isocitrate/isopropylmalate dehydrogenase (InterPro:IPR001804), Isocitrate/isopropylmalate dehydrogenase, conserved site (InterPro:IPR019818); BEST Arabidopsis thaliana protein match is: isopropylmalate dehydrogenase 3 (TAIR:AT1G31180.1); Has 15265 Blast hits to 15265 proteins in 2613 species: Archae - 395; Bacteria - 8292; Metazoa - 578; Fungi - 832; Plants - 243; Viruses - 0; Other Eukaryotes - 4925 (source: NCBI BLink). & (p29102|leu3_brana : 521.0) 3-isopropylmalate dehydrogenase, chloroplast precursor (EC 1.1.1.85) (Beta-IPM dehydrogenase) (IMDH) (3-IPM-DH) - Brassica napus (Rape) & (reliability: 1052.0) &  (original description: no original description)","protein_coding"
"Kfl00434_0080","kfl00434_0080_v1.1","Klebsormidium nitens","(at4g08920 : 663.0) Encodes CRY1, a flavin-type blue-light photoreceptor with ATP binding and autophosphorylation activity. Functions in perception of blue / green ratio of light.  The photoreceptor may be involved in electron transport. Mutant phenotype displays a blue light-dependent inhibition of hypocotyl elongation. Photoreceptor activity requires light-induced homodimerisation of the N-terminal CNT1 domains of CRY1. Involved in blue-light induced stomatal opening. The C-terminal domain of the protein undergoes a light dependent conformational change.  Also involved in response to circadian rhythm. Mutants exhibit long hypocotyl under blue light and are out of phase in their response to circadian rhythm.  CRY1 is present in the nucleus and cytoplasm.  Different subcellular pools of CRY1 have different functions during photomorphogenesis of Arabidopsis seedlings.; cryptochrome 1 (CRY1); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cryptochrome/DNA photolyase, class 1 conserved site, C-terminal (InterPro:IPR018394), DNA photolyase, N-terminal (InterPro:IPR006050), Cryptochrome C-terminal (InterPro:IPR020978), DNA photolyase, FAD-binding/Cryptochrome, C-terminal (InterPro:IPR005101), Cryptochrome, plant (InterPro:IPR014134), Cryptochrome/DNA photolyase, class 1 (InterPro:IPR002081); BEST Arabidopsis thaliana protein match is: cryptochrome 2 (TAIR:AT1G04400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p40115|phr1_sinal : 592.0) Deoxyribodipyrimidine photo-lyase (EC 4.1.99.3) (DNA photolyase) (Photoreactivating enzyme) - Sinapis alba (White mustard) (Brassica hirta) & (reliability: 1326.0) &  (original description: no original description)","protein_coding"
"Kfl00436_0020","kfl00436_0020_v1.1","Klebsormidium nitens","(at5g43710 : 652.0) Glycosyl hydrolase family 47 protein; FUNCTIONS IN: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity, alpha-mannosidase activity, calcium ion binding; INVOLVED IN: protein amino acid N-linked glycosylation; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 47 (InterPro:IPR001382); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 47 protein (TAIR:AT1G27520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1304.0) &  (original description: no original description)","protein_coding"
"Kfl00442_0050","kfl00442_0050_v1.1","Klebsormidium nitens","(at5g19820 : 1219.0) embryo defective 2734 (emb2734); FUNCTIONS IN: lyase activity, binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cell wall, phycobilisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G27640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 2438.0) &  (original description: no original description)","protein_coding"
"Kfl00472_0040","kfl00472_0040_v1.1","Klebsormidium nitens","(at2g39090 : 296.0) tetratricopeptide repeat (TPR)-containing protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: anaphase-promoting complex subunit 8 (TAIR:AT3G48150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 592.0) &  (original description: no original description)","protein_coding"
"Kfl00475_0050","kfl00475_0050_v1.1","Klebsormidium nitens","(at5g59770 : 198.0) Protein-tyrosine phosphatase-like, PTPLA; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase-like, PTPLA (InterPro:IPR007482); BEST Arabidopsis thaliana protein match is: Protein-tyrosine phosphatase-like, PTPLA (TAIR:AT5G10480.2); Has 698 Blast hits to 698 proteins in 198 species: Archae - 0; Bacteria - 0; Metazoa - 336; Fungi - 172; Plants - 117; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (reliability: 396.0) &  (original description: no original description)","protein_coding"
"Kfl00477_0050","kfl00477_0050_v1.1","Klebsormidium nitens","(p40392|ric1_orysa : 214.0) Ras-related protein RIC1 - Oryza sativa (Rice) & (at4g17530 : 209.0) RAB GTPase homolog 1C (RAB1C); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog 1A (TAIR:AT5G47200.1); Has 29496 Blast hits to 29428 proteins in 784 species: Archae - 23; Bacteria - 169; Metazoa - 15486; Fungi - 4134; Plants - 3462; Viruses - 20; Other Eukaryotes - 6202 (source: NCBI BLink). & (reliability: 418.0) &  (original description: no original description)","protein_coding"
"Kfl00479_0080","kfl00479_0080_v1.1","Klebsormidium nitens","(at1g12000 : 703.0) Phosphofructokinase family protein; FUNCTIONS IN: diphosphate-fructose-6-phosphate 1-phosphotransferase activity; INVOLVED IN: response to cadmium ion, glycolysis, photosynthesis; LOCATED IN: pyrophosphate-dependent phosphofructokinase complex, beta-subunit complex, cell wall, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase PfpB (InterPro:IPR011183), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: Phosphofructokinase family protein (TAIR:AT4G04040.1); Has 6357 Blast hits to 6276 proteins in 1942 species: Archae - 28; Bacteria - 4805; Metazoa - 61; Fungi - 134; Plants - 409; Viruses - 4; Other Eukaryotes - 916 (source: NCBI BLink). & (q41141|pfpb_ricco : 697.0) Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta (EC 2.7.1.90) (PFP) (6-phosphofructokinase, pyrophosphate dependent) (Pyrophosphate-dependent 6-phosphofructose-1-kinase) (PPi-PFK) - Ricinus communis (Castor bean) & (reliability: 1406.0) &  (original description: no original description)","protein_coding"
"Kfl00481_0070","kfl00481_0070_v1.1","Klebsormidium nitens","(at3g09580 : 394.0) FAD/NAD(P)-binding oxidoreductase family protein; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937); BEST Arabidopsis thaliana protein match is: Flavin containing amine oxidoreductase family (TAIR:AT5G14220.1); Has 2908 Blast hits to 2906 proteins in 704 species: Archae - 36; Bacteria - 1433; Metazoa - 261; Fungi - 51; Plants - 352; Viruses - 0; Other Eukaryotes - 775 (source: NCBI BLink). & (reliability: 788.0) &  (original description: no original description)","protein_coding"
"Kfl00481_0090","kfl00481_0090_v1.1","Klebsormidium nitens","(at4g02060 : 837.0) Member of the minichromosome maintenance complex, involved in DNA replication initiation. Abundant in proliferating and  endocycling tissues. Localized in the nucleus during G1, S and G2 phases of the  cell cycle, and are released into the cytoplasmic compartment during mitosis. Binds chromatin.; PROLIFERA (PRL); CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), ATPase, AAA+ type, core (InterPro:IPR003593), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 7 (InterPro:IPR008050); BEST Arabidopsis thaliana protein match is: minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT5G44635.1). & (q43704|mcm3_maize : 242.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 1674.0) &  (original description: no original description)","protein_coding"
"Kfl00487_0010","kfl00487_0010_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00489_0080","kfl00489_0080_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00489_0090","kfl00489_0090_v1.1","Klebsormidium nitens"," (original description: no original description)","protein_coding"
"Kfl00499_0040","kfl00499_0040_v1.1","Klebsormidium nitens","(at3g58690 : 229.0) Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G54820.1); Has 119556 Blast hits to 118228 proteins in 3954 species: Archae - 119; Bacteria - 14059; Metazoa - 43160; Fungi - 10190; Plants - 33928; Viruses - 396; Other Eukaryotes - 17704 (source: NCBI BLink). & (o24585|cri4_maize : 196.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 440.0) &  (original description: no original description)","protein_coding"
"Kfl00502_0020","kfl00502_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00567_0050","kfl00567_0050_v1.1","Klebsormidium nitens","(at2g14050 : 705.0) minichromosome maintenance 9 (MCM9); FUNCTIONS IN: nucleoside-triphosphatase activity, DNA-dependent ATPase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: DNA-dependent DNA replication initiation, DNA replication; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), ATPase, AAA+ type, core (InterPro:IPR003593), DNA-dependent ATPase MCM (InterPro:IPR001208); BEST Arabidopsis thaliana protein match is: minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT1G44900.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q43704|mcm3_maize : 258.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 1410.0) &  (original description: no original description)","protein_coding"
"Kfl00604_0050","kfl00604_0050_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00610_0020","kfl00610_0020_v1.1","Klebsormidium nitens","(at3g26720 : 277.0) Glycosyl hydrolase family 38 protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: mannose metabolic process, carbohydrate metabolic process; LOCATED IN: plasma membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Glycoside hydrolase/deacetylase, beta/alpha-barrel (InterPro:IPR011330), Glycoside hydrolase, family 38, central domain (InterPro:IPR015341), Glycoside hydrolase, family 38, core (InterPro:IPR000602), Glycosyl hydrolases 38, C-terminal (InterPro:IPR011682); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 38 protein (TAIR:AT5G13980.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 554.0) &  (original description: no original description)","protein_coding"
"Kfl00629_0070","kfl00629_0070_v1.1","Klebsormidium nitens","(at5g47010 : 89.4) Required for nonsense-mediated mRNA decay. Involved in RNA interference. lba1 mutants has reduced sugar-induced expression of Atb-  amylase, is hypersensitive to glucose and abscisic acid and resistant to mannose, and shows early flowering, short day-sensitive growth, and seed germination phenotypes.; LOW-LEVEL BETA-AMYLASE 1 (LBA1); FUNCTIONS IN: in 6 functions; INVOLVED IN: sugar mediated signaling pathway, RNA interference, nuclear-transcribed mRNA catabolic process, nonsense-mediated decay, response to sucrose stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), RNA helicase UPF1, UPF2-interacting domain (InterPro:IPR018999); BEST Arabidopsis thaliana protein match is: DNA-binding protein, putative (TAIR:AT2G03270.1); Has 9640 Blast hits to 8330 proteins in 1330 species: Archae - 182; Bacteria - 2840; Metazoa - 3001; Fungi - 1369; Plants - 807; Viruses - 148; Other Eukaryotes - 1293 (source: NCBI BLink). & (reliability: 169.4) &  (original description: no original description)","protein_coding"
"Kfl00635_0050","kfl00635_0050_v1.1","Klebsormidium nitens","(at1g63680 : 628.0) Encodes AtMurE, a homolog of the bacterial MurE that catalyze the ATP-dependent formation of UDP-N-acetylmuramic acid-tripeptide in bacterial peptidoglycan biosynthesis.  Localized to plastids.  AtMurE is involved in chloroplast biogenesis.; MURE; FUNCTIONS IN: acid-amino acid ligase activity, ATP binding, ligase activity; INVOLVED IN: chloroplast fission, chloroplast organization, biosynthetic process; LOCATED IN: chloroplast, nucleoid; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Mur ligase, central (InterPro:IPR013221), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (InterPro:IPR005761), Mur ligase, N-terminal (InterPro:IPR000713), Mur ligase, C-terminal (InterPro:IPR004101); Has 18234 Blast hits to 18170 proteins in 2587 species: Archae - 50; Bacteria - 13487; Metazoa - 59; Fungi - 43; Plants - 60; Viruses - 2; Other Eukaryotes - 4533 (source: NCBI BLink). & (reliability: 1256.0) &  (original description: no original description)","protein_coding"
"Kfl00642_0030","kfl00642_0030_v1.1","Klebsormidium nitens","(at1g04420 : 263.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity, aldo-keto reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395); BEST Arabidopsis thaliana protein match is: potassium channel beta subunit 1 (TAIR:AT1G04690.1); Has 28623 Blast hits to 28597 proteins in 2530 species: Archae - 619; Bacteria - 18927; Metazoa - 1497; Fungi - 1929; Plants - 977; Viruses - 0; Other Eukaryotes - 4674 (source: NCBI BLink). & (q40648|kcab_orysa : 99.4) Probable voltage-gated potassium channel subunit beta (K(+) channel subunit beta) - Oryza sativa (Rice) & (reliability: 526.0) &  (original description: no original description)","protein_coding"
"Kfl00651_0010","kfl00651_0010_v1.1","Klebsormidium nitens","(at4g34200 : 709.0) embryo sac development arrest 9 (EDA9); FUNCTIONS IN: ATP binding; INVOLVED IN: megagametogenesis; LOCATED IN: mitochondrion, chloroplast, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: D-3-phosphoglycerate dehydrogenase (InterPro:IPR006236), D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), D-3-phosphogylcerate Dehydrogenase (InterPro:IPR015508), Amino acid-binding ACT (InterPro:IPR002912), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-3-phosphoglycerate dehydrogenase (TAIR:AT3G19480.1); Has 30608 Blast hits to 30602 proteins in 2772 species: Archae - 489; Bacteria - 18520; Metazoa - 741; Fungi - 1175; Plants - 586; Viruses - 5; Other Eukaryotes - 9092 (source: NCBI BLink). & (p13443|dhgy_cucsa : 95.5) Glycerate dehydrogenase (EC 1.1.1.29) (NADH-dependent hydroxypyruvate reductase) (HPR) (GDH) - Cucumis sativus (Cucumber) & (reliability: 1418.0) &  (original description: no original description)","protein_coding"
"Kfl00690_0040","kfl00690_0040_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00690_g13","kfl00690_g13_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00729_0030","kfl00729_0030_v1.1","Klebsormidium nitens","(at5g40200 : 650.0) Encodes a putative DegP protease.; DegP protease 9 (DegP9); FUNCTIONS IN: serine-type peptidase activity, catalytic activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: nucleolus, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), Serine endopeptidase DegP2 (InterPro:IPR015724), Peptidase S1C, HrtA/DegP2/Q/S (InterPro:IPR001940), Peptidase S1/S6, chymotrypsin/Hap (InterPro:IPR001254), PDZ/DHR/GLGF (InterPro:IPR001478); BEST Arabidopsis thaliana protein match is: DEGP protease 2 (TAIR:AT2G47940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1300.0) &  (original description: no original description)","protein_coding"
"Kfl00741_0040","kfl00741_0040_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00771_0050","kfl00771_0050_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00788_0010","kfl00788_0010_v1.1","Klebsormidium nitens","(at5g46280 : 794.0) MINICHROMOSOME MAINTENANCE 3 (MCM3); FUNCTIONS IN: nucleoside-triphosphatase activity, DNA-dependent ATPase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: cell proliferation, DNA-dependent DNA replication initiation, DNA unwinding involved in replication; LOCATED IN: nuclear chromatin; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), ATPase, AAA+ type, core (InterPro:IPR003593), DNA-dependent ATPase MCM (InterPro:IPR001208), DNA-dependent ATPase MCM, conserved site (InterPro:IPR018525), MCM protein 3 (InterPro:IPR008046); BEST Arabidopsis thaliana protein match is: Minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT4G02060.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43704|mcm3_maize : 643.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 1588.0) &  (original description: no original description)","protein_coding"
"Kfl00819_0010","kfl00819_0010_v1.1","Klebsormidium nitens","(at5g13980 : 316.0) Glycosyl hydrolase family 38 protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: mannose metabolic process, carbohydrate metabolic process; LOCATED IN: apoplast, cell wall, plasma membrane, vacuole, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Glycoside hydrolase/deacetylase, beta/alpha-barrel (InterPro:IPR011330), Glycoside hydrolase, family 38, central domain (InterPro:IPR015341), Glycoside hydrolase, family 38, core (InterPro:IPR000602), Glycosyl hydrolases 38, C-terminal (InterPro:IPR011682); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 38 protein (TAIR:AT3G26720.1); Has 1157 Blast hits to 1109 proteins in 192 species: Archae - 7; Bacteria - 147; Metazoa - 691; Fungi - 22; Plants - 155; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (reliability: 632.0) &  (original description: no original description)","protein_coding"
"Kfl00858_0020","kfl00858_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00912_0040","kfl00912_0040_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00933_0030","kfl00933_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00998_0020","kfl00998_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00998_0030","kfl00998_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl01000_0010","kfl01000_0010_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl01292_0010","kfl01292_0010_v1.1","Klebsormidium nitens","(at2g40550 : 368.0) Encodes a nuclear localized target of E2Fa-DPa, transcription factors controlling cell cycle progression. Required for sister chromatid cohesion and DNA repair.; E2F target gene 1 (ETG1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: sister chromatid cohesion, postreplication repair, DNA replication; LOCATED IN: nuclear replisome, nucleus, chloroplast envelope, MCM complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2044, membrane (InterPro:IPR019140); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 736.0) &  (original description: no original description)","protein_coding"
"Kfl01328_0010","kfl01328_0010_v1.1","Klebsormidium nitens","(at2g21280 : 368.0) A nuclear-encoded, plastid-targeted protein (AtSulA) whose overexpression causes severe yet stochastic plastid (shown in chloroplasts and leucoplasts) division defects. The protein does not appear to interact with either AtFtsZ proteins when studied in a yeast two-hybrid system.; SULA; FUNCTIONS IN: coenzyme binding, binding, catalytic activity; INVOLVED IN: chloroplast fission; LOCATED IN: chloroplast, plastid, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar nucleotide epimerase YfcH, putative (InterPro:IPR010099), NAD-dependent epimerase/dehydratase (InterPro:IPR001509), Domain of unknown function DUF1731, C-terminal (InterPro:IPR013549), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G33360.2); Has 4854 Blast hits to 4853 proteins in 1452 species: Archae - 38; Bacteria - 3329; Metazoa - 111; Fungi - 30; Plants - 185; Viruses - 0; Other Eukaryotes - 1161 (source: NCBI BLink). & (reliability: 736.0) &  (original description: no original description)","protein_coding"
"Kfl01467_0010","kfl01467_0010_v1.1","Klebsormidium nitens","(at4g19540 : 322.0) IND1(iron-sulfur protein required for NADH dehydrogenase)-like (INDL); LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase-like, ParA/MinD (InterPro:IPR019591); BEST Arabidopsis thaliana protein match is: ATP binding (TAIR:AT3G24430.1); Has 13193 Blast hits to 13164 proteins in 2587 species: Archae - 550; Bacteria - 7572; Metazoa - 442; Fungi - 431; Plants - 201; Viruses - 0; Other Eukaryotes - 3997 (source: NCBI BLink). & (reliability: 644.0) &  (original description: no original description)","protein_coding"
"LOC_Os01g03110","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g03260","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g05790","No alias","Oryza sativa","SLT1 protein, putative, expressed","protein_coding"
"LOC_Os01g09300","No alias","Oryza sativa","oxidoreductase, putative, expressed","protein_coding"
"LOC_Os01g10610","No alias","Oryza sativa","BES1/BZR1 homolog protein, putative, expressed","protein_coding"
"LOC_Os01g11414","No alias","Oryza sativa","sodium/calcium exchanger protein, putative, expressed","protein_coding"
"LOC_Os01g12540","No alias","Oryza sativa","GTPase of unknown function domain containing protein, putative, expressed","protein_coding"
"LOC_Os01g12650","No alias","Oryza sativa","reticulon domain containing protein, putative, expressed","protein_coding"
"LOC_Os01g13660","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g15250","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g19160","No alias","Oryza sativa","protein kinase domain containing protein, expressed","protein_coding"
"LOC_Os01g19490","No alias","Oryza sativa","pentatricopeptide, putative, expressed","protein_coding"
"LOC_Os01g25730","No alias","Oryza sativa","retrotransposon protein, putative, unclassified","protein_coding"
"LOC_Os01g31940","No alias","Oryza sativa","purine permease, putative, expressed","protein_coding"
"LOC_Os01g34630","No alias","Oryza sativa","retrotransposon protein, putative, Ty1-copia subclass, expressed","protein_coding"
"LOC_Os01g35050","No alias","Oryza sativa","early-responsive to dehydration protein-related, putative, expressed","protein_coding"
"LOC_Os01g40250","No alias","Oryza sativa","down-regulated in metastasis family protein, expressed","protein_coding"
"LOC_Os01g42600","No alias","Oryza sativa","hypothetical protein","protein_coding"
"LOC_Os01g46380","No alias","Oryza sativa","ketol-acid reductoisomerase, chloroplast precursor, putative, expressed","protein_coding"
"LOC_Os01g47200","No alias","Oryza sativa","retrotransposon protein, putative, unclassified, expressed","protein_coding"
"LOC_Os01g47580","No alias","Oryza sativa","lipid phosphatase protein, putative, expressed","protein_coding"
"LOC_Os01g49130","No alias","Oryza sativa","retrotransposon protein, putative, unclassified, expressed","protein_coding"
"LOC_Os01g49310","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g50622","No alias","Oryza sativa","DNA-binding protein DSP1, putative, expressed","protein_coding"
"LOC_Os01g51060","No alias","Oryza sativa","hydrolase, putative, expressed","protein_coding"
"LOC_Os01g53220","No alias","Oryza sativa","HSF-type DNA-binding domain containing protein, expressed","protein_coding"
"LOC_Os01g53370","No alias","Oryza sativa","anthocyanidin 5,3-O-glucosyltransferase, putative, expressed","protein_coding"
"LOC_Os01g53890","No alias","Oryza sativa","RNA methyltransferase, TrmH family protein, putative, expressed","protein_coding"
"LOC_Os01g57260","No alias","Oryza sativa","vacuolar protein sorting-associated protein 28 homolog 2, putative, expressed","protein_coding"
"LOC_Os01g57930","No alias","Oryza sativa","CDP-alcohol phosphatidyltransferase, putative, expressed","protein_coding"
"LOC_Os01g58420","No alias","Oryza sativa","AP2 domain containing protein, expressed","protein_coding"
"LOC_Os01g59140","No alias","Oryza sativa","DNA-directed RNA polymerases I, II, and III subunit RPABC1, putative, expressed","protein_coding"
"LOC_Os01g59990","No alias","Oryza sativa","ribosomal protein L24, putative, expressed","protein_coding"
"LOC_Os01g60260","No alias","Oryza sativa","KH domain containing protein, putative, expressed","protein_coding"
"LOC_Os01g62350","No alias","Oryza sativa","60S ribosomal protein L36-2, putative, expressed","protein_coding"
"LOC_Os01g62380","No alias","Oryza sativa","fasciclin-like arabinogalactan protein, putative, expressed","protein_coding"
"LOC_Os01g62880","No alias","Oryza sativa","oxidoreductase, aldo/keto reductase family protein, putative, expressed","protein_coding"
"LOC_Os01g65150","No alias","Oryza sativa","proton-dependent oligopeptide transport, putative, expressed","protein_coding"
"LOC_Os01g67134","No alias","Oryza sativa","ribosomal L18p/L5e family protein, putative, expressed","protein_coding"
"LOC_Os01g67510","No alias","Oryza sativa","recA protein, putative, expressed","protein_coding"
"LOC_Os01g72049","No alias","Oryza sativa","retrotransposon, putative, centromere-specific, expressed","protein_coding"
"LOC_Os01g72240","No alias","Oryza sativa","uridine 5-monophosphate synthase, putative, expressed","protein_coding"
"LOC_Os01g72780","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g73170","No alias","Oryza sativa","peroxidase precursor, putative, expressed","protein_coding"
"LOC_Os01g73950","No alias","Oryza sativa","PPR repeat containing protein, expressed","protein_coding"
"LOC_Os01g74020","No alias","Oryza sativa","MYB family transcription factor, putative, expressed","protein_coding"
"LOC_Os01g74600","No alias","Oryza sativa","vegetative storage protein, putative, expressed","protein_coding"
"LOC_Os02g01350","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g03440","No alias","Oryza sativa","LSM domain containing protein, expressed","protein_coding"
"LOC_Os02g03730","No alias","Oryza sativa","SWIB/MDM2 domain containing protein, expressed","protein_coding"
"LOC_Os02g06190","No alias","Oryza sativa","phytosulfokine receptor precursor, putative, expressed","protein_coding"
"LOC_Os02g16690","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g18550","No alias","Oryza sativa","40S ribosomal protein S3a, putative, expressed","protein_coding"
"LOC_Os02g18830","No alias","Oryza sativa","ribosome biogenesis protein NEP1, putative, expressed","protein_coding"
"LOC_Os02g20000","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g25060","No alias","Oryza sativa","NTMC2Type1.2 protein, putative, expressed","protein_coding"
"LOC_Os02g27220","No alias","Oryza sativa","protein phosphatase 2C, putative, expressed","protein_coding"
"LOC_Os02g36110","No alias","Oryza sativa","cytochrome P450, putative, expressed","protein_coding"
"LOC_Os02g36190","No alias","Oryza sativa","cytochrome P450, putative, expressed","protein_coding"
"LOC_Os02g37070","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g37870","No alias","Oryza sativa","Brix domain containing protein, putative, expressed","protein_coding"
"LOC_Os02g37920","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g38310","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g39020","No alias","Oryza sativa","transposon protein, putative, unclassified, expressed","protein_coding"
"LOC_Os02g40460","No alias","Oryza sativa","S1 RNA binding domain containing protein, expressed","protein_coding"
"LOC_Os02g41670","No alias","Oryza sativa","phenylalanine ammonia-lyase, putative, expressed","protein_coding"
"LOC_Os02g42470","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g44104","No alias","Oryza sativa","F-box family protein, putative, expressed","protein_coding"
"LOC_Os02g45170","No alias","Oryza sativa","helix-loop-helix DNA-binding protein, putative, expressed","protein_coding"
"LOC_Os02g45240","No alias","Oryza sativa","zinc finger family protein, putative, expressed","protein_coding"
"LOC_Os02g47760","No alias","Oryza sativa","AAA-type ATPase family protein, putative, expressed","protein_coding"
"LOC_Os02g52810","No alias","Oryza sativa","remorin C-terminal domain containing protein, putative, expressed","protein_coding"
"LOC_Os02g54180","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g57980","No alias","Oryza sativa","DEAD/DEAH box helicase, putative, expressed","protein_coding"
"LOC_Os02g58510","No alias","Oryza sativa","GHMP kinases ATP-binding protein, putative, expressed","protein_coding"
"LOC_Os03g03140","No alias","Oryza sativa","RNA recognition motif containing protein, putative, expressed","protein_coding"
"LOC_Os03g03920","No alias","Oryza sativa","Ubiquitin family domain containing protein, expressed","protein_coding"
"LOC_Os03g04050","No alias","Oryza sativa","protein kinase family protein, putative, expressed","protein_coding"
"LOC_Os03g07870","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g08140","No alias","Oryza sativa","tubulin--tyrosine ligase-like protein 12, putative, expressed","protein_coding"
"LOC_Os03g11110","No alias","Oryza sativa","zinc finger family protein, putative, expressed","protein_coding"
"LOC_Os03g11440","No alias","Oryza sativa","protein transport protein Sec61 subunit alpha, putative, expressed","protein_coding"
"LOC_Os03g11510","No alias","Oryza sativa","mitochondrial carrier protein, putative, expressed","protein_coding"
"LOC_Os03g12450","No alias","Oryza sativa","nucleoporin, putative, expressed","protein_coding"
"LOC_Os03g13000","No alias","Oryza sativa","GTP-binding protein, putative, expressed","protein_coding"
"LOC_Os03g20550","No alias","Oryza sativa","WRKY55, expressed","protein_coding"
"LOC_Os03g22450","No alias","Oryza sativa","auxin response factor 75, putative, expressed","protein_coding"
"LOC_Os03g22880","No alias","Oryza sativa","nucleolar protein 5A, putative, expressed","protein_coding"
"LOC_Os03g22890","No alias","Oryza sativa","GTPase of unknown function domain containing protein, putative, expressed","protein_coding"
"LOC_Os03g23970","No alias","Oryza sativa","diphthine synthase, putative, expressed","protein_coding"
"LOC_Os03g25450","No alias","Oryza sativa","h/ACA ribonucleoprotein complex subunit 4, putative, expressed","protein_coding"
"LOC_Os03g27880","No alias","Oryza sativa","tetratricopeptide-like helical, putative, expressed","protein_coding"
"LOC_Os03g30840","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g32620","No alias","Oryza sativa","pentatricopeptide, putative, expressed","protein_coding"
"LOC_Os03g35720","No alias","Oryza sativa","retrotransposon protein, putative, Ty3-gypsy subclass, expressed","protein_coding"
"LOC_Os03g38980","No alias","Oryza sativa","tRNA synthetases class II domain containing protein, expressed","protein_coding"
"LOC_Os03g39690","No alias","Oryza sativa","cytochrome P450, putative, expressed","protein_coding"
"LOC_Os03g42820","No alias","Oryza sativa","LIM domain-containing protein, putative, expressed","protein_coding"
"LOC_Os03g42880","No alias","Oryza sativa","nucleotide-binding protein-like, putative, expressed","protein_coding"
"LOC_Os03g44140","No alias","Oryza sativa","OsWAK26 - OsWAK receptor-like protein kinase, expressed","protein_coding"
"LOC_Os03g44380","No alias","Oryza sativa","9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed","protein_coding"
"LOC_Os03g45970","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g49170","No alias","Oryza sativa","zinc finger family protein, putative, expressed","protein_coding"
"LOC_Os03g50030","No alias","Oryza sativa","phospholipase A2, putative, expressed","protein_coding"
"LOC_Os03g50090","No alias","Oryza sativa","transposon protein, putative, CACTA, En/Spm sub-class, expressed","protein_coding"
"LOC_Os03g50510","No alias","Oryza sativa","threonine dehydratase biosynthetic, chloroplast precursor, putative, expressed","protein_coding"
"LOC_Os03g56610","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g57340","No alias","Oryza sativa","chaperone protein dnaJ, putative, expressed","protein_coding"
"LOC_Os03g57690","No alias","Oryza sativa","aldehyde oxidase, putative, expressed","protein_coding"
"LOC_Os03g57870","No alias","Oryza sativa","RFC3 - Putative clamp loader of PCNA, replication factor C subunit 3, expressed","protein_coding"
"LOC_Os03g58330","No alias","Oryza sativa","BHLH transcription factor, putative, expressed","protein_coding"
"LOC_Os03g62720","No alias","Oryza sativa","exosome complex exonuclease, putative, expressed","protein_coding"
"LOC_Os03g63700","No alias","Oryza sativa","AIG2-like family domain containing protein, expressed","protein_coding"
"LOC_Os03g63720","No alias","Oryza sativa","exosome complex exonuclease, putative, expressed","protein_coding"
"LOC_Os04g05104","No alias","Oryza sativa","retrotransposon protein, putative, unclassified, expressed","protein_coding"
"LOC_Os04g06770","No alias","Oryza sativa","argonaute, putative, expressed","protein_coding"
"LOC_Os04g10530","No alias","Oryza sativa","amidase, putative, expressed","protein_coding"
"LOC_Os04g11730","No alias","Oryza sativa","methyl-CpG binding domain containing protein, expressed","protein_coding"
"LOC_Os04g15580","No alias","Oryza sativa","serine/threonine-protein kinase receptor precursor, putative, expressed","protein_coding"
"LOC_Os04g16842","No alias","Oryza sativa","DNA-directed RNA polymerase subunit alpha, putative, expressed","protein_coding"
"LOC_Os04g22360","No alias","Oryza sativa","DUF647 domain containing protein, putative, expressed","protein_coding"
"LOC_Os04g32920","No alias","Oryza sativa","potassium transporter, putative, expressed","protein_coding"
"LOC_Os04g36070","No alias","Oryza sativa","OsRR1  type-A response regulator, expressed","protein_coding"
"LOC_Os04g39360","No alias","Oryza sativa","heavy metal transport/detoxification protein, putative, expressed","protein_coding"
"LOC_Os04g41040","No alias","Oryza sativa","DNA-directed RNA polymerases I, II, and III subunit RPABC1, putative, expressed","protein_coding"
"LOC_Os04g41300","No alias","Oryza sativa","ribosome recycling factor, putative, expressed","protein_coding"
"LOC_Os04g44620","No alias","Oryza sativa","hus1-like protein, expressed","protein_coding"
"LOC_Os04g46620","No alias","Oryza sativa","T-complex protein, putative, expressed","protein_coding"
"LOC_Os04g47380","No alias","Oryza sativa","coiled-coil domain-containing protein 139, putative, expressed","protein_coding"
"LOC_Os04g56730","No alias","Oryza sativa","repressor of RNA polymerase III transcription MAF1, putative, expressed","protein_coding"
"LOC_Os04g57350","No alias","Oryza sativa","EH domain-containing protein 1, putative, expressed","protein_coding"
"LOC_Os04g57950","No alias","Oryza sativa","dihydroorotate dihydrogenase protein, putative, expressed","protein_coding"
"LOC_Os05g01940","No alias","Oryza sativa","zinc finger, RING-type, putative, expressed","protein_coding"
"LOC_Os05g04000","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os05g05354","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os05g08900","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os05g09480","No alias","Oryza sativa","OsIAA16 - Auxin-responsive Aux/IAA gene family member, expressed","protein_coding"
"LOC_Os05g24450","No alias","Oryza sativa","hypothetical protein","protein_coding"
"LOC_Os05g33350","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os05g34270","No alias","Oryza sativa","inactive receptor kinase At1g27190 precursor, putative, expressed","protein_coding"
"LOC_Os05g34460","No alias","Oryza sativa","OsDegp7 - Putative Deg protease homologue, expressed","protein_coding"
"LOC_Os05g37520","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os05g38880","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os05g43060","No alias","Oryza sativa","retrotransposon, putative, centromere-specific, expressed","protein_coding"
"LOC_Os05g43670","No alias","Oryza sativa","IQ calmodulin-binding motif family protein, putative, expressed","protein_coding"
"LOC_Os05g43770","No alias","Oryza sativa","NLI interacting factor-like phosphatase, putative, expressed","protein_coding"
"LOC_Os05g44320","No alias","Oryza sativa","WD domain, G-beta repeat domain containing protein, expressed","protein_coding"
"LOC_Os05g46510","No alias","Oryza sativa","polygalacturonase, putative, expressed","protein_coding"
"LOC_Os06g03520","No alias","Oryza sativa","DUF581 domain containing protein, expressed","protein_coding"
"LOC_Os06g03560","No alias","Oryza sativa","oligopeptide transporter, putative, expressed","protein_coding"
"LOC_Os06g04190","No alias","Oryza sativa","rad1, putative, expressed","protein_coding"
"LOC_Os06g04590","No alias","Oryza sativa","OsSAUR24 - Auxin-responsive SAUR gene family member, expressed","protein_coding"
"LOC_Os06g04870","No alias","Oryza sativa","homeobox associated leucine zipper, putative, expressed","protein_coding"
"LOC_Os06g05090","No alias","Oryza sativa","methyltransferase domain containing protein, expressed","protein_coding"
"LOC_Os06g05730","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os06g06470","No alias","Oryza sativa","U-box domain containing heat shock protein, putative, expressed","protein_coding"
"LOC_Os06g07160","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os06g08170","No alias","Oryza sativa","transporter, major facilitator family, putative, expressed","protein_coding"
"LOC_Os06g09570","No alias","Oryza sativa","nucleolar GTP-binding protein 1, putative, expressed","protein_coding"
"LOC_Os06g09630","No alias","Oryza sativa","3-oxoacyl-synthase, putative, expressed","protein_coding"
"LOC_Os06g13020","No alias","Oryza sativa","DNA polymerase lambda, putative, expressed","protein_coding"
"LOC_Os06g16290","No alias","Oryza sativa","ribosomal protein L7Ae, putative, expressed","protein_coding"
"LOC_Os06g18900","No alias","Oryza sativa","cadmium tolerance factor, putative, expressed","protein_coding"
"LOC_Os06g22070","No alias","Oryza sativa","mitochondrial glycoprotein, putative, expressed","protein_coding"
"LOC_Os06g23780","No alias","Oryza sativa","glutaryl-CoA dehydrogenase, mitochondrial precursor, putative, expressed","protein_coding"
"LOC_Os06g30420","No alias","Oryza sativa","PPR repeat domain containing protein, putative, expressed","protein_coding"
"LOC_Os06g33520","No alias","Oryza sativa","DEAD/DEAH box helicase, putative, expressed","protein_coding"
"LOC_Os06g33970","No alias","Oryza sativa","VQ domain containing protein, putative, expressed","protein_coding"
"LOC_Os06g34730","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os06g35470","No alias","Oryza sativa","L1P family of ribosomal proteins domain containing protein, expressed","protein_coding"
"LOC_Os06g39330","No alias","Oryza sativa","UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed","protein_coding"
"LOC_Os06g39460","No alias","Oryza sativa","transposon protein, putative, CACTA, En/Spm sub-class, expressed","protein_coding"
"LOC_Os06g39820","No alias","Oryza sativa","retrotransposon protein, putative, unclassified, expressed","protein_coding"
"LOC_Os06g40050","No alias","Oryza sativa","mitochondrial carrier protein, putative, expressed","protein_coding"
"LOC_Os06g40440","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os06g42030","No alias","Oryza sativa","potassium transporter, putative, expressed","protein_coding"
"LOC_Os06g43690","No alias","Oryza sativa","WD repeat-containing protein, putative, expressed","protein_coding"
"LOC_Os06g45300","No alias","Oryza sativa","serine/threonine-protein kinase HT1, putative, expressed","protein_coding"
"LOC_Os06g48970","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os07g01920","No alias","Oryza sativa","nucleolar GTP-binding protein 1, putative, expressed","protein_coding"
"LOC_Os07g08050","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os07g08340","No alias","Oryza sativa","pyruvate kinase, putative, expressed","protein_coding"
"LOC_Os07g10350","No alias","Oryza sativa","S1 RNA binding domain containing protein, expressed","protein_coding"
"LOC_Os07g10660","No alias","Oryza sativa","ribosomal protein, putative, expressed","protein_coding"
"LOC_Os07g18990","No alias","Oryza sativa","LTPL40 - Protease inhibitor/seed storage/LTP family protein precursor, expressed","protein_coding"
"LOC_Os07g25710","No alias","Oryza sativa","myb-like DNA-binding domain containing protein, expressed","protein_coding"
"LOC_Os07g29320","No alias","Oryza sativa","rRNA-processing protein EBP2, putative, expressed","protein_coding"
"LOC_Os07g30820","No alias","Oryza sativa","zinc finger family protein, putative, expressed","protein_coding"
"LOC_Os07g33790","No alias","Oryza sativa","glutamate receptor 3.4 precursor, putative, expressed","protein_coding"
"LOC_Os07g37290","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os07g38430","No alias","Oryza sativa","WD domain, G-beta repeat domain containing protein, expressed","protein_coding"
"LOC_Os07g38600","No alias","Oryza sativa","REX1 DNA Repair family protein, expressed","protein_coding"
"LOC_Os07g38730","No alias","Oryza sativa","tubulin/FtsZ domain containing protein, putative, expressed","protein_coding"
"LOC_Os07g39920","No alias","Oryza sativa","formin, putative, expressed","protein_coding"
"LOC_Os08g01150","No alias","Oryza sativa","DTA2, putative, expressed","protein_coding"
"LOC_Os08g01220","No alias","Oryza sativa","harpin-induced protein 1 domain containing protein, expressed","protein_coding"
"LOC_Os08g01650","No alias","Oryza sativa","Rf1, mitochondrial precursor, putative, expressed","protein_coding"
"LOC_Os08g07840","No alias","Oryza sativa","PolI-like DNA polymerase, putative, expressed","protein_coding"
"LOC_Os08g08690","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os08g09040","No alias","Oryza sativa","Cupin domain containing protein, expressed","protein_coding"
"LOC_Os08g14440","No alias","Oryza sativa","uridylyltransferase-related, putative, expressed","protein_coding"
"LOC_Os08g16860","No alias","Oryza sativa","OsFBX282 - F-box domain containing protein, expressed","protein_coding"
"LOC_Os08g25600","No alias","Oryza sativa","hypothetical protein","protein_coding"
"LOC_Os08g27824","No alias","Oryza sativa","NOL1/NOP2/sun family protein, putative, expressed","protein_coding"
"LOC_Os08g28570","No alias","Oryza sativa","resistance protein, putative, expressed","protein_coding"
"LOC_Os08g29020","No alias","Oryza sativa","wall-associated kinase-like 2, putative, expressed","protein_coding"
"LOC_Os08g31970","No alias","Oryza sativa","NHL repeat-containing protein, putative, expressed","protein_coding"
"LOC_Os08g35440","No alias","Oryza sativa","Ser/Thr protein phosphatase family protein, putative, expressed","protein_coding"
"LOC_Os08g36790","No alias","Oryza sativa","bZIP transcription factor, putative, expressed","protein_coding"
"LOC_Os08g37432","No alias","Oryza sativa","MATE efflux family protein, putative, expressed","protein_coding"
"LOC_Os08g38320","No alias","Oryza sativa","AGC_PVPK_like_kin82y.14 - ACG kinases include homologs to PKA, PKG and PKC, expressed","protein_coding"
"LOC_Os08g39450","No alias","Oryza sativa","AN1-like zinc finger domain containing protein, expressed","protein_coding"
"LOC_Os09g02270","No alias","Oryza sativa","cyclase family protein, putative, expressed","protein_coding"
"LOC_Os09g02810","No alias","Oryza sativa","CCAAT/enhancer-binding protein, putative, expressed","protein_coding"
"LOC_Os09g07780","No alias","Oryza sativa","pentatricopeptide repeat protein PPR986-12, putative, expressed","protein_coding"
"LOC_Os09g07800","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os09g10270","No alias","Oryza sativa","SKP1-like protein 1B, putative, expressed","protein_coding"
"LOC_Os09g10600","No alias","Oryza sativa","enoyl-acyl-carrier-protein reductase NADH, chloroplast precursor, expressed","protein_coding"
"LOC_Os09g13410","No alias","Oryza sativa","plant protein of unknown function domain containing protein, expressed","protein_coding"
"LOC_Os09g23370","No alias","Oryza sativa","proline-rich protein 6, putative, expressed","protein_coding"
"LOC_Os09g24240","No alias","Oryza sativa","pentatricopeptide, putative, expressed","protein_coding"
"LOC_Os09g26820","No alias","Oryza sativa","exo70 exocyst complex subunit, putative, expressed","protein_coding"
"LOC_Os09g29080","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os09g29930","No alias","Oryza sativa","transcription factor BIM2, putative, expressed","protein_coding"
"LOC_Os09g32130","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os09g36600","No alias","Oryza sativa","nodulin, putative, expressed","protein_coding"
"LOC_Os09g37860","No alias","Oryza sativa","NOL1/NOP2/sun family protein, putative, expressed","protein_coding"
"LOC_Os09g38100","No alias","Oryza sativa","phosphate carrier protein, mitochondrial precursor, putative, expressed","protein_coding"
"LOC_Os09g38400","No alias","Oryza sativa","prostatic spermine-binding protein precursor, putative, expressed","protein_coding"
"LOC_Os10g03730","No alias","Oryza sativa","OsFBX347 - F-box domain containing protein, expressed","protein_coding"
"LOC_Os10g06610","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os10g21332","No alias","Oryza sativa","chloroplast 30S ribosomal protein S11, putative, expressed","protein_coding"
"LOC_Os10g25060","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os10g26610","No alias","Oryza sativa","mandelonitrile lyase, putative, expressed","protein_coding"
"LOC_Os10g30100","No alias","Oryza sativa","3-5 exonuclease family protein, putative, expressed","protein_coding"
"LOC_Os10g33275","No alias","Oryza sativa","DEAD/DEAH box helicase domain containing protein, expressed","protein_coding"
"LOC_Os10g35730","No alias","Oryza sativa","pentatricopeptide repeat domain containing protein, putative, expressed","protein_coding"
"LOC_Os10g36810","No alias","Oryza sativa","plus-3 domain containing protein, putative, expressed","protein_coding"
"LOC_Os10g37880","No alias","Oryza sativa","oxidoreductase, putative, expressed","protein_coding"
"LOC_Os10g42880","No alias","Oryza sativa","retrotransposon protein, putative, unclassified, expressed","protein_coding"
"LOC_Os11g01750","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os11g02510","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os11g04860","No alias","Oryza sativa","anthocyanin 5-O-glucosyltransferase, putative, expressed","protein_coding"
"LOC_Os11g06000","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os11g06780","No alias","Oryza sativa","serine/threonine-protein kinase BRI1-like 1 precursor, putative, expressed","protein_coding"
"LOC_Os11g07030","No alias","Oryza sativa","integrator complex subunit 3, putative, expressed","protein_coding"
"LOC_Os11g10520","No alias","Oryza sativa","dehydrogenase, putative, expressed","protein_coding"
"LOC_Os11g10750","No alias","Oryza sativa","OsSCP48 - Putative Serine Carboxypeptidase homologue, expressed","protein_coding"
"LOC_Os11g14430","No alias","Oryza sativa","APOBEC1 complementation factor, putative, expressed","protein_coding"
"LOC_Os11g14990","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os11g16430","No alias","Oryza sativa","diphthamide biosynthesis protein, putative, expressed","protein_coding"
"LOC_Os11g27360","No alias","Oryza sativa","retrotransposon, putative, centromere-specific, expressed","protein_coding"
"LOC_Os11g28070","No alias","Oryza sativa","retrotransposon protein, putative, unclassified","protein_coding"
"LOC_Os11g32780","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os11g34350","No alias","Oryza sativa","ATP-binding cassette sub-family E member 1, putative, expressed","protein_coding"
"LOC_Os11g40330","No alias","Oryza sativa","hypothetical protein","protein_coding"
"LOC_Os11g42200","No alias","Oryza sativa","laccase precursor protein, putative, expressed","protein_coding"
"LOC_Os11g42800","No alias","Oryza sativa","kinesin motor domain containing protein, putative, expressed","protein_coding"
"LOC_Os12g01380","No alias","Oryza sativa"," proteins of unknown function domain containing protein, expressed","protein_coding"
"LOC_Os12g04150","No alias","Oryza sativa","alpha/beta hydrolase fold, putative, expressed","protein_coding"
"LOC_Os12g04350","No alias","Oryza sativa","sulfotransferase domain containing protein, expressed","protein_coding"
"LOC_Os12g06220","No alias","Oryza sativa","harpin-induced protein 1 domain containing protein, expressed","protein_coding"
"LOC_Os12g06650","No alias","Oryza sativa","tetratricopeptide-like helical, putative, expressed","protein_coding"
"LOC_Os12g06670","No alias","Oryza sativa","protein kinase family protein, putative, expressed","protein_coding"
"LOC_Os12g06910","No alias","Oryza sativa","nucleolar protein family 6, putative, expressed","protein_coding"
"LOC_Os12g07874","No alias","Oryza sativa","WD-40 repeat family protein, putative, expressed","protein_coding"
"LOC_Os12g09540","No alias","Oryza sativa","phosphoribosylamine--glycine ligase, putative, expressed","protein_coding"
"LOC_Os12g16410","No alias","Oryza sativa","isoflavone reductase, putative, expressed","protein_coding"
"LOC_Os12g19304","No alias","Oryza sativa","Fe-S metabolism associated domain containing protein, expressed","protein_coding"
"LOC_Os12g30380","No alias","Oryza sativa","hypothetical protein","protein_coding"
"LOC_Os12g30730","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os12g36910","No alias","Oryza sativa","calmodulin binding protein, putative, expressed","protein_coding"
"LOC_Os12g39630","No alias","Oryza sativa","CAMK_CAMK_like.49 - CAMK includes calcium/calmodulin depedent protein kinases, expressed","protein_coding"
"LOC_Os12g40570","No alias","Oryza sativa","WRKY94, expressed","protein_coding"
"LOC_Os12g41230","No alias","Oryza sativa","tesmin/TSO1-like CXC domain containing protein, expressed","protein_coding"
"LOC_Os12g42150","No alias","Oryza sativa","WD domain, G-beta repeat domain containing protein, expressed","protein_coding"
"LOC_Os12g42960","No alias","Oryza sativa","expressed protein","protein_coding"
"MA_10426142g0010","No alias","Picea abies","(at5g10560 : 843.0) Glycosyl hydrolase family protein; FUNCTIONS IN: xylan 1,4-beta-xylosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family protein (TAIR:AT1G78060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p83344|xynb_prupe : 370.0) Putative beta-D-xylosidase (EC 3.2.1.-) (PpAz152) (Fragment) - Prunus persica (Peach) & (reliability: 1686.0) &  (original description: no original description)","protein_coding"
"MA_10426627g0010","No alias","Picea abies","(at4g02930 : 184.0) GTP binding Elongation factor Tu family protein; FUNCTIONS IN: translation elongation factor activity, cobalt ion binding, zinc ion binding, ATP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, cell wall; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, bacterial/organelle (InterPro:IPR004541), Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog E1B (TAIR:AT4G20360.1); Has 89361 Blast hits to 89296 proteins in 17600 species: Archae - 1195; Bacteria - 40691; Metazoa - 19476; Fungi - 9897; Plants - 2075; Viruses - 6; Other Eukaryotes - 16021 (source: NCBI BLink). & (p56292|eftu_chlvu : 145.0) Elongation factor Tu (EF-Tu) - Chlorella vulgaris (Green alga) & (reliability: 368.0) &  (original description: no original description)","protein_coding"
"MA_10427207g0010","No alias","Picea abies",""(at1g56170 : 205.0) Encodes a protein with similarity to a subunit of  the CCAAT promoter motif binding complex of yeast.One of two members of this class (HAP5B) and expressed in vegetative and reproductive tissues; ""nuclear factor Y, subunit C2"" (NF-YC2); CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit C9 (TAIR:AT1G08970.2); Has 1485 Blast hits to 1485 proteins in 232 species: Archae - 0; Bacteria - 0; Metazoa - 583; Fungi - 338; Plants - 429; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (reliability: 410.0) &  (original description: no original description)"","protein_coding"
"MA_10427420g0010","No alias","Picea abies","(at1g48410 : 253.0) Encodes an RNA Slicer that selectively recruits microRNAs and siRNAs.  There is currently no evidence that AGO1 Slicer is in a high molecular weight RNA-induced silencing complex (RISC).  Mutants are defective in post-transcriptional gene silencing and have pleiotropic developmental and morphological defects. Through its action on the  regulation of ARF17 expression, the protein regulates genes involved at the cross talk between auxin and light signaling during adventitious root development. AGO1 seems to be targeted for degradation by silencing suppressor F-box-containing proteins from Turnip yellow virus and Cucurbit aphid-borne yellow virus.; ARGONAUTE 1 (AGO1); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Stabilizer of iron transporter SufD / Polynucleotidyl transferase (TAIR:AT5G43810.2). & (reliability: 506.0) &  (original description: no original description)","protein_coding"
"MA_10431887g0010","No alias","Picea abies","(at1g71340 : 116.0) PLC-like phosphodiesterases superfamily protein; FUNCTIONS IN: phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity; INVOLVED IN: glycerol metabolic process, lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), Glycerophosphoryl diester phosphodiesterase (InterPro:IPR004129); Has 6308 Blast hits to 6301 proteins in 1557 species: Archae - 95; Bacteria - 5357; Metazoa - 60; Fungi - 20; Plants - 36; Viruses - 13; Other Eukaryotes - 727 (source: NCBI BLink). & (reliability: 232.0) &  (original description: no original description)","protein_coding"
"MA_10432273g0010","No alias","Picea abies","(at3g05480 : 326.0) Involved in the regulation of DNA damage repair and homologous recombination.; RAD9; CONTAINS InterPro DOMAIN/s: Rad9 (InterPro:IPR007268), Cell cycle checkpoint, RAD9 (InterPro:IPR016552). & (reliability: 652.0) &  (original description: no original description)","protein_coding"
"MA_10433285g0010","No alias","Picea abies","(at3g12940 : 594.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G19895.1); Has 67 Blast hits to 67 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 1188.0) &  (original description: no original description)","protein_coding"
"MA_10433419g0010","No alias","Picea abies","(at5g47790 : 367.0) SMAD/FHA domain-containing protein ; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253); BEST Arabidopsis thaliana protein match is: SMAD/FHA domain-containing protein  (TAIR:AT5G38840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (o24381|tlc1_soltu : 103.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 734.0) &  (original description: no original description)","protein_coding"
"MA_10435675g0010","No alias","Picea abies","(at4g38790 : 421.0) ER lumen protein retaining receptor family protein; FUNCTIONS IN: ER retention sequence binding, receptor activity; INVOLVED IN: protein retention in ER lumen, protein transport; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: ER lumen protein retaining receptor (InterPro:IPR000133); BEST Arabidopsis thaliana protein match is: ER lumen protein retaining receptor family protein (TAIR:AT2G21190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q9ztn2|erd2_pethy : 114.0) ER lumen protein retaining receptor (HDEL receptor) (PGP169-12) - Petunia hybrida (Petunia) & (reliability: 842.0) &  (original description: no original description)","protein_coding"
"MA_10436314g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_10436935g0010","No alias","Picea abies","(at1g04590 : 185.0) BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G18975.4); Has 111 Blast hits to 111 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 109; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 370.0) &  (original description: no original description)","protein_coding"
"MA_10437070g0010","No alias","Picea abies","(at5g10920 : 420.0) L-Aspartase-like family protein; FUNCTIONS IN: argininosuccinate lyase activity, catalytic activity; INVOLVED IN: arginine biosynthetic process via ornithine, arginine biosynthetic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Argininosuccinate lyase (InterPro:IPR009049), L-Aspartase-like (InterPro:IPR008948), Fumarate lyase, conserved site (InterPro:IPR020557), Lyase 1, N-terminal (InterPro:IPR022761), Delta crystallin (InterPro:IPR003031), Fumarate lyase (InterPro:IPR000362); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p22675|arly_chlre : 194.0) Argininosuccinate lyase (EC 4.3.2.1) (Arginosuccinase) (ASAL) - Chlamydomonas reinhardtii & (reliability: 840.0) &  (original description: no original description)","protein_coding"
"MA_106205g0010","No alias","Picea abies","(at3g63090 : 405.0) Ubiquitin carboxyl-terminal hydrolase family protein; CONTAINS InterPro DOMAIN/s: RNA recognition domain, plant (InterPro:IPR021099); BEST Arabidopsis thaliana protein match is: Ubiquitin carboxyl-terminal hydrolase family protein (TAIR:AT2G31290.2); Has 411 Blast hits to 407 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 411; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 810.0) &  (original description: no original description)","protein_coding"
"MA_11503g0030","No alias","Picea abies","(at3g52220 : 192.0) CONTAINS InterPro DOMAIN/s: Kinase phosphorylation domain (InterPro:IPR019315); Has 8882 Blast hits to 4920 proteins in 346 species: Archae - 10; Bacteria - 184; Metazoa - 3955; Fungi - 1221; Plants - 712; Viruses - 24; Other Eukaryotes - 2776 (source: NCBI BLink). & (reliability: 384.0) &  (original description: no original description)","protein_coding"
"MA_131661g0010","No alias","Picea abies","(at3g16310 : 130.0) mitotic phosphoprotein N' end (MPPN) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: MPPN (InterPro:IPR007846), Nucleoporin, NUP53 (InterPro:IPR017389); Has 220 Blast hits to 220 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 144; Fungi - 5; Plants - 57; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 260.0) &  (original description: no original description)","protein_coding"
"MA_1873g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_238344g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_24903g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_296059g0020","No alias","Picea abies","(at4g02750 : 572.0) Tetratricopeptide repeat (TPR)-like superfamily protein; LOCATED IN: mitochondrion; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G09410.1); Has 56089 Blast hits to 14902 proteins in 275 species: Archae - 0; Bacteria - 15; Metazoa - 173; Fungi - 123; Plants - 55165; Viruses - 0; Other Eukaryotes - 613 (source: NCBI BLink). & (q76c99|rf1_orysa : 115.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1060.0) &  (original description: no original description)","protein_coding"
"MA_38217g0020","No alias","Picea abies","(at3g55060 : 300.0) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G39300.2); Has 61765 Blast hits to 33720 proteins in 2065 species: Archae - 846; Bacteria - 6964; Metazoa - 31967; Fungi - 5247; Plants - 3104; Viruses - 205; Other Eukaryotes - 13432 (source: NCBI BLink). & (reliability: 600.0) &  (original description: no original description)","protein_coding"
"MA_396190g0010","No alias","Picea abies","(at1g79920 : 82.8) Heat shock protein 70 (Hsp 70) family protein; FUNCTIONS IN: ATP binding; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: male gametophyte, guard cell, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock protein 91 (TAIR:AT1G79930.1); Has 26399 Blast hits to 25673 proteins in 4386 species: Archae - 152; Bacteria - 11778; Metazoa - 3903; Fungi - 1562; Plants - 1156; Viruses - 127; Other Eukaryotes - 7721 (source: NCBI BLink). & (reliability: 165.6) &  (original description: no original description)","protein_coding"
"MA_41068g0020","No alias","Picea abies","(at5g14270 : 147.0) bromodomain and extraterminal domain protein 9 (BET9); FUNCTIONS IN: DNA binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: bromodomain and extraterminal domain protein 10 (TAIR:AT3G01770.1). & (reliability: 294.0) &  (original description: no original description)","protein_coding"
"MA_498229g0010","No alias","Picea abies","(at5g26600 : 447.0) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: pyridoxal phosphate binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT3G62130.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 874.0) &  (original description: no original description)","protein_coding"
"MA_546546g0010","No alias","Picea abies","(at4g17760 : 236.0) damaged DNA binding;exodeoxyribonuclease IIIs; FUNCTIONS IN: damaged DNA binding, exodeoxyribonuclease III activity; INVOLVED IN: DNA repair; LOCATED IN: nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Repair protein Rad1/Rec1 (InterPro:IPR003021); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 472.0) &  (original description: no original description)","protein_coding"
"MA_614278g0020","No alias","Picea abies","(at1g01040 : 202.0) Encodes a Dicer homolog. Dicer is a RNA helicase involved in microRNA processing. Mutations in this locus can result in embryo lethality. Embryo shape at seed maturity is globular-elongate. Other mutants convert the floral meristems to an indeterminate state, others yet show defects in ovule development. mRNA is expressed in all shoot tissues. DCL1 is able to produce miRNAs and siRNAs.; dicer-like 1 (DCL1); CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), Double-stranded RNA-binding (InterPro:IPR001159), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Ribonuclease III (InterPro:IPR000999), Double-stranded RNA-binding-like (InterPro:IPR014720), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Dicer double-stranded RNA-binding fold (InterPro:IPR005034), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: dicer-like 3 (TAIR:AT3G43920.1). & (reliability: 404.0) &  (original description: no original description)","protein_coding"
"MA_646875g0010","No alias","Picea abies","(at1g73650 : 295.0) FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors; INVOLVED IN: lipid metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal (InterPro:IPR001104), Protein of unknown function DUF1295 (InterPro:IPR010721); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1295) (TAIR:AT1G18180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 590.0) &  (original description: no original description)","protein_coding"
"MA_6893360g0010","No alias","Picea abies","(at3g44670 : 84.0) Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: defense response to bacterium, defense response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT3G44480.1); Has 43078 Blast hits to 25516 proteins in 938 species: Archae - 40; Bacteria - 3512; Metazoa - 4196; Fungi - 281; Plants - 32050; Viruses - 26; Other Eukaryotes - 2973 (source: NCBI BLink). & (reliability: 167.2) &  (original description: no original description)","protein_coding"
"MA_6896100g0010","No alias","Picea abies","(at5g53920 : 124.0) ribosomal protein L11 methyltransferase-related; FUNCTIONS IN: protein methyltransferase activity; INVOLVED IN: protein amino acid methylation; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Ribosomal protein L11 methyltransferase (InterPro:IPR004498), Ribosomal L11 methyltransferase, PrmA (InterPro:IPR010456); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 248.0) &  (original description: no original description)","protein_coding"
"MA_8464559g0010","No alias","Picea abies","(at5g16930 : 137.0) AAA-type ATPase family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), Protein of unknown function DUF3523 (InterPro:IPR021911); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G03060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 260.0) &  (original description: no original description)","protein_coding"
"MA_89328g0010","No alias","Picea abies","(at5g66631 : 419.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G53700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q76c99|rf1_orysa : 109.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 838.0) &  (original description: no original description)","protein_coding"
"MA_9089g0010","No alias","Picea abies","(at1g33270 : 200.0) Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein; INVOLVED IN: lipid metabolic process; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Patatin (InterPro:IPR002641); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 400.0) &  (original description: no original description)","protein_coding"
"MA_913563g0020","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_9969164g0010","No alias","Picea abies","(at1g27180 : 245.0) disease resistance protein (TIR-NBS-LRR class), putative; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: transmembrane receptors;ATP binding (TAIR:AT1G27170.1); Has 83534 Blast hits to 33450 proteins in 1183 species: Archae - 68; Bacteria - 4700; Metazoa - 16188; Fungi - 1127; Plants - 56869; Viruses - 12; Other Eukaryotes - 4570 (source: NCBI BLink). & (reliability: 490.0) &  (original description: no original description)","protein_coding"
"Mp1g01590.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g03120.1","No alias","Marchantia polymorpha","subunit alpha of tryptophan synthase complex","protein_coding"
"Mp1g03770.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g06830.1","No alias","Marchantia polymorpha","Peroxidase 3 OS=Arabidopsis thaliana (sp|o23044|per3_arath : 238.0)","protein_coding"
"Mp1g08910.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g09020.1","No alias","Marchantia polymorpha","histone (H2A)","protein_coding"
"Mp1g10310.1","No alias","Marchantia polymorpha","transcription factor (MYB). transcription factor (MYB-related). component CDC5/MAC1 of non-snRNP MOS4-associated complex","protein_coding"
"Mp1g12000.1","No alias","Marchantia polymorpha","DNA repair protein RAD51 homolog 4 OS=Arabidopsis thaliana (sp|q9lqq2|ra51d_arath : 189.0)","protein_coding"
"Mp1g12960.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g13040.1","No alias","Marchantia polymorpha","Protein STICHEL-like 3 OS=Arabidopsis thaliana (sp|f4jrp0|stil3_arath : 313.0)","protein_coding"
"Mp1g17150.1","No alias","Marchantia polymorpha","Pentatricopeptide repeat-containing protein At1g51965, mitochondrial OS=Arabidopsis thaliana (sp|q9zu27|ppr76_arath : 292.0)","protein_coding"
"Mp1g21270.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g21580.1","No alias","Marchantia polymorpha","RNA helicase (Prp28)","protein_coding"
"Mp1g26240.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp2g02830.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp2g11100.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp2g11390.1","No alias","Marchantia polymorpha","protease (RBL)","protein_coding"
"Mp2g11510.1","No alias","Marchantia polymorpha","component MRE11 of MRE11-RAD50-NBS1 (MRN) complex. component MRE11 of DNA resection MRE11-RAD50-NBS1 (MRN) complex","protein_coding"
"Mp2g12070.1","No alias","Marchantia polymorpha","mechanosensitive ion channel (Piezo)","protein_coding"
"Mp2g13180.1","No alias","Marchantia polymorpha","Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase(50.2.4 : 191.5) & UDP-glycosyltransferase 73E1 OS=Stevia rebaudiana (sp|q6vaa9|u73e1_stere : 191.0)","protein_coding"
"Mp2g20230.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp2g23110.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp2g25370.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp3g09750.1","No alias","Marchantia polymorpha","alpha-class expansin","protein_coding"
"Mp3g14580.1","No alias","Marchantia polymorpha","Cell cycle checkpoint protein RAD17 OS=Arabidopsis thaliana (sp|q9mba3|rad17_arath : 220.0)","protein_coding"
"Mp3g19940.1","No alias","Marchantia polymorpha","protein kinase (DYRK)","protein_coding"
"Mp3g20470.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp3g22030.1","No alias","Marchantia polymorpha","Mitochondrial Rho GTPase 1 OS=Arabidopsis thaliana (sp|q8rxf8|miro1_arath : 774.0)","protein_coding"
"Mp3g23000.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp3g24950.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp3g24960.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp4g03960.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp4g06240.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp4g06930.1","No alias","Marchantia polymorpha","FSD2-interacting component of plastid-encoded RNA polymerase","protein_coding"
"Mp4g09540.1","No alias","Marchantia polymorpha","helicase component eIF4A3 of RNA quality control Exon Junction complex","protein_coding"
"Mp4g13190.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp4g14620.1","No alias","Marchantia polymorpha","ERF-peptide receptor (ER). protein kinase (LRR-XIIIb)","protein_coding"
"Mp4g18040.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp4g20400.1","No alias","Marchantia polymorpha","component SF3A3 of splicing factor 3A complex","protein_coding"
"Mp4g20520.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp4g21960.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp5g00130.1","No alias","Marchantia polymorpha","RAD9 spindle assembly checkpoint protein","protein_coding"
"Mp5g00720.1","No alias","Marchantia polymorpha","Germin-like protein subfamily 2 member 2 OS=Arabidopsis thaliana (sp|q9fz27|gl22_arath : 124.0)","protein_coding"
"Mp5g16650.1","No alias","Marchantia polymorpha","STIG1/GRI precursor polypeptide","protein_coding"
"Mp5g24200.1","No alias","Marchantia polymorpha","component VIP6/CTR9 of PAF1C transcription initiation and elongation complex","protein_coding"
"Mp6g06110.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp6g10670.1","No alias","Marchantia polymorpha","component RFC2 of PCNA sliding clamp loader complex","protein_coding"
"Mp6g11700.1","No alias","Marchantia polymorpha","Protein DMP6 OS=Arabidopsis thaliana (sp|q9fnl3|dmp6_arath : 106.0)","protein_coding"
"Mp6g18560.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp6g21120.1","No alias","Marchantia polymorpha","aureusidin synthase","protein_coding"
"Mp7g00180.1","No alias","Marchantia polymorpha","RAB-GTPase-activating protein (RAB-GAP)","protein_coding"
"Mp7g00930.1","No alias","Marchantia polymorpha","Uncharacterized PKHD-type hydroxylase At1g22950 OS=Arabidopsis thaliana (sp|q3ed68|y1295_arath : 405.0)","protein_coding"
"Mp7g02530.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp7g02800.1","No alias","Marchantia polymorpha","Probable protein phosphatase 2C 11 OS=Arabidopsis thaliana (sp|q8vzn9|p2c11_arath : 142.0)","protein_coding"
"Mp7g10220.1","No alias","Marchantia polymorpha","ornithine carbamoyltransferase","protein_coding"
"Mp8g00360.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp8g02840.1","No alias","Marchantia polymorpha","Shikimate O-hydroxycinnamoyltransferase OS=Nicotiana tabacum (sp|q8gsm7|hst_tobac : 120.0) & Enzyme classification.EC_2 transferases.EC_2.3 acyltransferase(50.2.3 : 34.1)","protein_coding"
"Mp8g08440.1","No alias","Marchantia polymorpha","Alpha carbonic anhydrase 7 OS=Arabidopsis thaliana (sp|q8l817|atca7_arath : 103.0) & Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen lyase(50.4.2 : 46.9)","protein_coding"
"Mp8g09400.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp8g09660.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp8g10730.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Potri.001G139100","No alias","Populus trichocarpa","damaged DNA binding;exodeoxyribonuclease IIIs","protein_coding"
"Potri.001G201700","No alias","Populus trichocarpa","Function unknown","protein_coding"
"Potri.013G017500","No alias","Populus trichocarpa","cell cycle checkpoint control protein family","protein_coding"
"Pp1s106_207V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s10_152V6","No alias","Physcomitrella patens","ribonuclease p","protein_coding"
"Pp1s10_312V6","No alias","Physcomitrella patens","F11A6.6; serine/threonine protein phosphatase 2A (PP2A) 55 kDa regulatory subunit B [KO:K04354] [Arabidopsis thaliana]","protein_coding"
"Pp1s110_108V6","No alias","Physcomitrella patens","unknown [Picea sitchensis]","protein_coding"
"Pp1s110_58V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s114_5V6","No alias","Physcomitrella patens","outward rectifying potassium channel","protein_coding"
"Pp1s115_132V6","No alias","Physcomitrella patens","clathrin coat assembly protein","protein_coding"
"Pp1s120_56V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s121_60V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s124_112V6","No alias","Physcomitrella patens","K9I9.19; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s124_86V6","No alias","Physcomitrella patens","dna repair protein","protein_coding"
"Pp1s12_28V6","No alias","Physcomitrella patens","ghmp kinase","protein_coding"
"Pp1s130_202V6","No alias","Physcomitrella patens","dna repair protein","protein_coding"
"Pp1s135_28V6","No alias","Physcomitrella patens","3d domain protein","protein_coding"
"Pp1s136_154V6","No alias","Physcomitrella patens","mediator complex subunit 20","protein_coding"
"Pp1s138_80V6","No alias","Physcomitrella patens","nucleotide pyrophosphatase-like protein","protein_coding"
"Pp1s13_437V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s142_41V6","No alias","Physcomitrella patens","histone deacetylase superfamily","protein_coding"
"Pp1s142_89V6","No alias","Physcomitrella patens","peptidyl-trna hydrolase","protein_coding"
"Pp1s143_101V6","No alias","Physcomitrella patens","potassium transporter","protein_coding"
"Pp1s143_67V6","No alias","Physcomitrella patens","protein binding","protein_coding"
"Pp1s145_77V6","No alias","Physcomitrella patens","ferredoxin","protein_coding"
"Pp1s151_27V6","No alias","Physcomitrella patens","muty homolog","protein_coding"
"Pp1s153_115V6","No alias","Physcomitrella patens","atp-dependent rna helicase","protein_coding"
"Pp1s157_7V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s159_87V6","No alias","Physcomitrella patens","MFG13.4; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s15_286V6","No alias","Physcomitrella patens","ubiquitin carboxyl-terminal hydrolase isozyme","protein_coding"
"Pp1s15_297V6","No alias","Physcomitrella patens","mus81 endonuclease homolog","protein_coding"
"Pp1s162_4V6","No alias","Physcomitrella patens","tetratricopeptide repeat","protein_coding"
"Pp1s163_45V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s176_61V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s17_105V6","No alias","Physcomitrella patens","dna binding","protein_coding"
"Pp1s181_38V6","No alias","Physcomitrella patens","contains ESTs C98964(E3293),C98965(E3293) unknown protein [Oryza sativa (japonica cultivar-group)]","protein_coding"
"Pp1s190_34V6","No alias","Physcomitrella patens","pentatricopeptide repeat-containing","protein_coding"
"Pp1s190_65V6","No alias","Physcomitrella patens","bet3 family protein","protein_coding"
"Pp1s1_350V6","No alias","Physcomitrella patens","proline-rich polypeptide 6 isoform 1","protein_coding"
"Pp1s1_781V6","No alias","Physcomitrella patens","centromere kinetochore protein zw10","protein_coding"
"Pp1s20_106V6","No alias","Physcomitrella patens","hypothetical protein [Oryza sativa (japonica cultivar-group)]","protein_coding"
"Pp1s212_79V6","No alias","Physcomitrella patens","e-cadherin binding","protein_coding"
"Pp1s218_13V6","No alias","Physcomitrella patens","RNA-directed RNA polymerase","protein_coding"
"Pp1s21_311V6","No alias","Physcomitrella patens","cytidine deaminase","protein_coding"
"Pp1s21_405V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s225_109V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s230_37V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s233_64V6","No alias","Physcomitrella patens","MXC17.7; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s234_21V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s234_64V6","No alias","Physcomitrella patens","proteasome subunit alpha type 7","protein_coding"
"Pp1s23_25V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s23_277V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s240_31V6","No alias","Physcomitrella patens","polynucleotide kinase- 3 -","protein_coding"
"Pp1s244_9V6","No alias","Physcomitrella patens","protein kinase","protein_coding"
"Pp1s258_50V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s25_216V6","No alias","Physcomitrella patens","sec12-like protein 1","protein_coding"
"Pp1s262_27V6","No alias","Physcomitrella patens","phd finger protein","protein_coding"
"Pp1s263_60V6","No alias","Physcomitrella patens","auxin-induced protein","protein_coding"
"Pp1s266_48V6","No alias","Physcomitrella patens","structural constituent of","protein_coding"
"Pp1s267_84V6","No alias","Physcomitrella patens","hypothetical protein [Dictyostelium discoideum]","protein_coding"
"Pp1s268_31V6","No alias","Physcomitrella patens","MHJ24.17; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s281_128V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s286_37V6","No alias","Physcomitrella patens","T29E15.2; metal-dependent phosphohydrolase HD domain-containing protein [Arabidopsis thaliana]","protein_coding"
"Pp1s2_635V6","No alias","Physcomitrella patens","menage a trois 1","protein_coding"
"Pp1s2_746V6","No alias","Physcomitrella patens","multidrug resistance","protein_coding"
"Pp1s31_241V6","No alias","Physcomitrella patens","tubulin-specific chaperone c-related","protein_coding"
"Pp1s31_336V6","No alias","Physcomitrella patens","cullin c","protein_coding"
"Pp1s32_226V6","No alias","Physcomitrella patens","hypothetical protein similar to Arabidopsis thaliana chromosome 5, At5g25830 [Oryza sativa (japonica cultivar-group)]","protein_coding"
"Pp1s335_14V6","No alias","Physcomitrella patens","formamidopyrimidine-dna glycosylase","protein_coding"
"Pp1s335_63V6","No alias","Physcomitrella patens","F9E10.9; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s338_22V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s33_278V6","No alias","Physcomitrella patens","peptidase m50","protein_coding"
"Pp1s359_15V6","No alias","Physcomitrella patens","LOC365361; similar to RIKEN cDNA 4930404J24 [Rattus norvegicus]","protein_coding"
"Pp1s35_108V6","No alias","Physcomitrella patens","hypothetical protein [Dictyostelium discoideum]","protein_coding"
"Pp1s363_41V6","No alias","Physcomitrella patens","MJH22.4; hypothetical protein [Arabidopsis thaliana]","protein_coding"
"Pp1s369_14V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s372_51V6","No alias","Physcomitrella patens","MBK21.14; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s387_10V6","No alias","Physcomitrella patens","serine-threonine protein plant-","protein_coding"
"Pp1s391_28V6","No alias","Physcomitrella patens","gen homolog endonuclease","protein_coding"
"Pp1s402_18V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s430_24V6","No alias","Physcomitrella patens","stearoyl-acyl carrier protein desaturase","protein_coding"
"Pp1s44_147V6","No alias","Physcomitrella patens","hypothetical protein [Dictyostelium discoideum]","protein_coding"
"Pp1s457_13V6","No alias","Physcomitrella patens","tropinone expressed","protein_coding"
"Pp1s46_192V6","No alias","Physcomitrella patens","golgi snare 12 protein","protein_coding"
"Pp1s46_220V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s4_22V6","No alias","Physcomitrella patens","T32E8.5; protein kinase family protein [Arabidopsis thaliana]","protein_coding"
"Pp1s50_56V6","No alias","Physcomitrella patens","fad dependent oxidoreductase","protein_coding"
"Pp1s512_6V6","No alias","Physcomitrella patens","unknown [Picea sitchensis]","protein_coding"
"Pp1s51_310V6","No alias","Physcomitrella patens","protein kinase family protein","protein_coding"
"Pp1s52_112V6","No alias","Physcomitrella patens","Hypothetical 79.4 kDa protein in ALD2-DDR48 intergenic region [Saccharomyces cerevisiae]","protein_coding"
"Pp1s54_184V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s54_236V6","No alias","Physcomitrella patens","cyclin h-1","protein_coding"
"Pp1s54_245V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s55_100V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s55_123V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s55_244V6","No alias","Physcomitrella patens","F15G16.190; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s57_63V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s59_294V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s59_367V6","No alias","Physcomitrella patens","leucine rich repeat family protein","protein_coding"
"Pp1s59_63V6","No alias","Physcomitrella patens","F6D8.25; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s642_3V6","No alias","Physcomitrella patens","n-terminal domain containing expressed","protein_coding"
"Pp1s67_171V6","No alias","Physcomitrella patens","at4g17760-like protein","protein_coding"
"Pp1s6_170V6","No alias","Physcomitrella patens","tbc domain containing protein","protein_coding"
"Pp1s7_273V6","No alias","Physcomitrella patens","hypothetical protein [Oryza sativa (japonica cultivar-group)]","protein_coding"
"Pp1s80_1V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s94_122V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s96_233V6","No alias","Physcomitrella patens","F8K7.20; F-box family protein [Arabidopsis thaliana]","protein_coding"
"PSME_00000050-RA","No alias","Pseudotsuga menziesii","(o24301|sus2_pea : 1072.0) Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP glucosyltransferase 2) - Pisum sativum (Garden pea) & (at4g02280 : 1068.0) Encodes a protein with sucrose synthase activity (SUS3). It appears to be important for sucrose metabolism in developing seeds, especially during the late maturation phase, about 18 days after flowering.; sucrose synthase 3 (SUS3); CONTAINS InterPro DOMAIN/s: Sucrose synthase, plant/cyanobacteria (InterPro:IPR012820), Sucrose synthase (InterPro:IPR000368), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: sucrose synthase 2 (TAIR:AT5G49190.1); Has 6506 Blast hits to 6505 proteins in 1621 species: Archae - 256; Bacteria - 4351; Metazoa - 95; Fungi - 50; Plants - 824; Viruses - 0; Other Eukaryotes - 930 (source: NCBI BLink). & (reliability: 2136.0) &  (original description: no original description)","protein_coding"
"PSME_00000389-RA","No alias","Pseudotsuga menziesii",""(at2g45510 : 490.0) member of CYP704A; ""cytochrome P450, family 704, subfamily A, polypeptide 2"" (CYP704A2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 704, subfamily A, polypeptide 1 (TAIR:AT2G44890.1); Has 29367 Blast hits to 29266 proteins in 1497 species: Archae - 44; Bacteria - 2694; Metazoa - 10887; Fungi - 6277; Plants - 8316; Viruses - 3; Other Eukaryotes - 1146 (source: NCBI BLink). & (o48921|c97b2_soybn : 143.0) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 980.0) &  (original description: no original description)"","protein_coding"
"PSME_00000390-RA","No alias","Pseudotsuga menziesii",""(at2g45510 : 311.0) member of CYP704A; ""cytochrome P450, family 704, subfamily A, polypeptide 2"" (CYP704A2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 704, subfamily A, polypeptide 1 (TAIR:AT2G44890.1); Has 29367 Blast hits to 29266 proteins in 1497 species: Archae - 44; Bacteria - 2694; Metazoa - 10887; Fungi - 6277; Plants - 8316; Viruses - 3; Other Eukaryotes - 1146 (source: NCBI BLink). & (o48921|c97b2_soybn : 93.2) Cytochrome P450 97B2 (EC 1.14.-.-) - Glycine max (Soybean) & (reliability: 622.0) &  (original description: no original description)"","protein_coding"
"PSME_00001144-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00002789-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00002791-RA","No alias","Pseudotsuga menziesii","(at5g06710 : 97.8) Homeobox-leucine zipper protein.; homeobox from Arabidopsis thaliana (HAT14); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein (TAIR:AT4G17460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 190.2) &  (original description: no original description)","protein_coding"
"PSME_00003325-RA","No alias","Pseudotsuga menziesii","(at3g61790 : 386.0) Protein with RING/U-box and TRAF-like domains; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; INVOLVED IN: multicellular organismal development, ubiquitin-dependent protein catabolic process, protein ubiquitination; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Seven-in-absentia protein, TRAF-like domain (InterPro:IPR018121), Zinc finger, SIAH-type (InterPro:IPR013010), Zinc finger, RING-type (InterPro:IPR001841), Seven In Absentia Homolog-type (InterPro:IPR013323), Seven-in-absentia protein, sina (InterPro:IPR004162), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: Protein with RING/U-box and TRAF-like domains (TAIR:AT4G27880.1); Has 1836 Blast hits to 1817 proteins in 706 species: Archae - 0; Bacteria - 0; Metazoa - 1264; Fungi - 11; Plants - 486; Viruses - 2; Other Eukaryotes - 73 (source: NCBI BLink). & (q8t3y0|sinal_drome : 99.4) Probable E3 ubiquitin-protein ligase sina-like CG13030 (EC 6.3.2.-) - Drosophila melanogaster (Fruit fly) & (reliability: 772.0) &  (original description: no original description)","protein_coding"
"PSME_00004855-RA","No alias","Pseudotsuga menziesii","(at5g36930 : 118.0) Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT5G17680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 220.0) &  (original description: no original description)","protein_coding"
"PSME_00006298-RA","No alias","Pseudotsuga menziesii","(at3g13224 : 226.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G40490.1); Has 77800 Blast hits to 37058 proteins in 1622 species: Archae - 33; Bacteria - 18580; Metazoa - 32661; Fungi - 6344; Plants - 11400; Viruses - 392; Other Eukaryotes - 8390 (source: NCBI BLink). & (p19682|roc3_nicsy : 92.4) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP) - Nicotiana sylvestris (Wood tobacco) & (reliability: 452.0) &  (original description: no original description)","protein_coding"
"PSME_00006373-RA","No alias","Pseudotsuga menziesii","(at2g36910 : 328.0) Belongs to the family of ATP-binding cassette (ABC) transporters. Also known as AtMDR1.Possibly regulates auxin-dependent responses by influencing basipetal auxin transport in the root.  Exerts nonredundant, partially overlapping functions with the ABC transporter encoded by AT3G28860.  PGP1 mediates cellular efflux of IAA and interacts with PIN genes that may confer an accelerated vectoral component to PGP-mediated transport. The non-polar localization of PGP1 at root and shoot apices, where IAA gradient-driven transport is impaired, may be required to confer directionality to auxin transport in those tissues.; ATP binding cassette subfamily B1 (ABCB1); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, calmodulin binding, auxin efflux transmembrane transporter activity; INVOLVED IN: in 10 processes; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ATP binding cassette subfamily B19 (TAIR:AT3G28860.1); Has 825599 Blast hits to 386427 proteins in 4134 species: Archae - 14573; Bacteria - 644325; Metazoa - 17752; Fungi - 12077; Plants - 9020; Viruses - 35; Other Eukaryotes - 127817 (source: NCBI BLink). & (q6yuu5|mdr_orysa : 251.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 656.0) &  (original description: no original description)","protein_coding"
"PSME_00006637-RA","No alias","Pseudotsuga menziesii","(at2g36910 : 115.0) Belongs to the family of ATP-binding cassette (ABC) transporters. Also known as AtMDR1.Possibly regulates auxin-dependent responses by influencing basipetal auxin transport in the root.  Exerts nonredundant, partially overlapping functions with the ABC transporter encoded by AT3G28860.  PGP1 mediates cellular efflux of IAA and interacts with PIN genes that may confer an accelerated vectoral component to PGP-mediated transport. The non-polar localization of PGP1 at root and shoot apices, where IAA gradient-driven transport is impaired, may be required to confer directionality to auxin transport in those tissues.; ATP binding cassette subfamily B1 (ABCB1); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, calmodulin binding, auxin efflux transmembrane transporter activity; INVOLVED IN: in 10 processes; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ATP binding cassette subfamily B19 (TAIR:AT3G28860.1); Has 825599 Blast hits to 386427 proteins in 4134 species: Archae - 14573; Bacteria - 644325; Metazoa - 17752; Fungi - 12077; Plants - 9020; Viruses - 35; Other Eukaryotes - 127817 (source: NCBI BLink). & (reliability: 230.0) &  (original description: no original description)","protein_coding"
"PSME_00006838-RA","No alias","Pseudotsuga menziesii","(at3g21360 : 250.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Taurine catabolism dioxygenase TauD/TfdA (InterPro:IPR003819); Has 1029 Blast hits to 1021 proteins in 229 species: Archae - 0; Bacteria - 729; Metazoa - 46; Fungi - 17; Plants - 110; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink). & (reliability: 500.0) &  (original description: no original description)","protein_coding"
"PSME_00007452-RA","No alias","Pseudotsuga menziesii","(at3g28860 : 90.9) Belongs to the family of ATP-binding cassette (ABC) transporters. Also known as AtMDR11 and PGP19. Possibly regulates auxin-dependent responses by influencing basipetal auxin transport in the root. Acts upstream of phyA in regulating hypocotyl elongation and gravitropic response. Exerts nonredundant, partially overlapping functions with the ABC transporter encoded by AtPGP1.; ATP binding cassette subfamily B19 (ABCB19); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, auxin efflux transmembrane transporter activity; INVOLVED IN: in 14 processes; LOCATED IN: plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ATP binding cassette subfamily B1 (TAIR:AT2G36910.1); Has 832220 Blast hits to 388750 proteins in 4155 species: Archae - 14331; Bacteria - 653917; Metazoa - 17455; Fungi - 11958; Plants - 9253; Viruses - 33; Other Eukaryotes - 125273 (source: NCBI BLink). & (reliability: 181.8) &  (original description: no original description)","protein_coding"
"PSME_00008312-RA","No alias","Pseudotsuga menziesii","(at1g48210 : 182.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G17410.1); Has 107658 Blast hits to 106510 proteins in 4484 species: Archae - 105; Bacteria - 12834; Metazoa - 39234; Fungi - 8236; Plants - 31887; Viruses - 332; Other Eukaryotes - 15030 (source: NCBI BLink). & (o24585|cri4_maize : 84.0) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 364.0) &  (original description: no original description)","protein_coding"
"PSME_00009355-RA","No alias","Pseudotsuga menziesii","(at2g01830 : 218.0) Histidine kinase: cytokinin-binding receptor that transduces cytokinin signals across the plasma membrane; WOODEN LEG (WOL); FUNCTIONS IN: osmosensor activity, cytokine binding, cytokinin receptor activity, protein histidine kinase activity, phosphoprotein phosphatase activity; INVOLVED IN: in 7 processes; LOCATED IN: membrane; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 2 (TAIR:AT5G35750.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 436.0) &  (original description: no original description)","protein_coding"
"PSME_00011037-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00011331-RA","No alias","Pseudotsuga menziesii","(at1g17455 : 135.0) ELF4-like 4 (ELF4-L4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1313 (InterPro:IPR009741); BEST Arabidopsis thaliana protein match is: ELF4-like 2 (TAIR:AT1G72630.1); Has 149 Blast hits to 148 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 148; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 270.0) &  (original description: no original description)","protein_coding"
"PSME_00011545-RA","No alias","Pseudotsuga menziesii","(at4g31530 : 97.4) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: 3-beta-hydroxy-delta5-steroid dehydrogenase activity, binding, catalytic activity; INVOLVED IN: steroid biosynthetic process, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 3-beta hydroxysteroid dehydrogenase/isomerase (InterPro:IPR002225), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G37660.1). & (reliability: 194.8) &  (original description: no original description)","protein_coding"
"PSME_00013341-RA","No alias","Pseudotsuga menziesii","(at4g26480 : 189.0) RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT5G56140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 378.0) &  (original description: no original description)","protein_coding"
"PSME_00014759-RA","No alias","Pseudotsuga menziesii","(at2g36910 : 186.0) Belongs to the family of ATP-binding cassette (ABC) transporters. Also known as AtMDR1.Possibly regulates auxin-dependent responses by influencing basipetal auxin transport in the root.  Exerts nonredundant, partially overlapping functions with the ABC transporter encoded by AT3G28860.  PGP1 mediates cellular efflux of IAA and interacts with PIN genes that may confer an accelerated vectoral component to PGP-mediated transport. The non-polar localization of PGP1 at root and shoot apices, where IAA gradient-driven transport is impaired, may be required to confer directionality to auxin transport in those tissues.; ATP binding cassette subfamily B1 (ABCB1); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, calmodulin binding, auxin efflux transmembrane transporter activity; INVOLVED IN: in 10 processes; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ATP binding cassette subfamily B19 (TAIR:AT3G28860.1); Has 825599 Blast hits to 386427 proteins in 4134 species: Archae - 14573; Bacteria - 644325; Metazoa - 17752; Fungi - 12077; Plants - 9020; Viruses - 35; Other Eukaryotes - 127817 (source: NCBI BLink). & (q6yuu5|mdr_orysa : 111.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 372.0) &  (original description: no original description)","protein_coding"
"PSME_00016601-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00018123-RA","No alias","Pseudotsuga menziesii","(at1g70520 : 420.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 2 (CRK2); FUNCTIONS IN: kinase activity; INVOLVED IN: response to ozone; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (TAIR:AT5G40380.1); Has 123193 Blast hits to 121713 proteins in 4855 species: Archae - 110; Bacteria - 13886; Metazoa - 45515; Fungi - 10581; Plants - 34413; Viruses - 473; Other Eukaryotes - 18215 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 196.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 840.0) &  (original description: no original description)","protein_coding"
"PSME_00018900-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00019304-RA","No alias","Pseudotsuga menziesii","(at5g64050 : 666.0) Glutamate-tRNA ligase. Targeted to mitochondria and chloroplast. Its inactivation causes developmental arrest of chloroplasts and mitochondria in Nicotiana benthamiana.; glutamate tRNA synthetase (ERS); FUNCTIONS IN: protein binding, glutamate-tRNA ligase activity; INVOLVED IN: chloroplast organization, glutamyl-tRNA aminoacylation, mitochondrion organization, tRNA aminoacylation, ovule development; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Glutamyl/glutaminyl-tRNA synthetase, class Ic, alpha-bundle domain (InterPro:IPR020061), Glutamyl-tRNA synthetase, class Ic, bacterial/mitochondrial (InterPro:IPR004527), Glutamyl/glutaminyl-tRNA synthetase, class Ic, N-terminal (InterPro:IPR020060), Aminoacyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR008925), Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain (InterPro:IPR020058), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Glutamyl/glutaminyl-tRNA synthetase, class Ic (InterPro:IPR000924), Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 (InterPro:IPR020751); BEST Arabidopsis thaliana protein match is: Glutamyl/glutaminyl-tRNA synthetase, class Ic (TAIR:AT5G26710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43794|sye_tobac : 655.0) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA ligase) (GluRS) - Nicotiana tabacum (Common tobacco) & (reliability: 1332.0) &  (original description: no original description)","protein_coding"
"PSME_00023003-RA","No alias","Pseudotsuga menziesii","(at4g17760 : 308.0) damaged DNA binding;exodeoxyribonuclease IIIs; FUNCTIONS IN: damaged DNA binding, exodeoxyribonuclease III activity; INVOLVED IN: DNA repair; LOCATED IN: nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Repair protein Rad1/Rec1 (InterPro:IPR003021); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 616.0) &  (original description: no original description)","protein_coding"
"PSME_00026025-RA","No alias","Pseudotsuga menziesii","(at1g22690 : 83.2) Gibberellin-regulated family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to gibberellin stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Gibberellin regulated protein (InterPro:IPR003854); BEST Arabidopsis thaliana protein match is: Gibberellin-regulated family protein (TAIR:AT2G18420.1). & (reliability: 166.4) &  (original description: no original description)","protein_coding"
"PSME_00027124-RA","No alias","Pseudotsuga menziesii","(at4g10780 : 169.0) LRR and NB-ARC domains-containing disease resistance protein; FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: N-terminal protein myristoylation, defense response, apoptosis; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G12220.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 338.0) &  (original description: no original description)","protein_coding"
"PSME_00027768-RA","No alias","Pseudotsuga menziesii","(at5g57860 : 132.0) Ubiquitin-like superfamily protein; CONTAINS InterPro DOMAIN/s: Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 264.0) &  (original description: no original description)","protein_coding"
"PSME_00029033-RA","No alias","Pseudotsuga menziesii","(at3g60190 : 629.0) At3g60190 encodes Arabidopsis dynamin-related protein 1E, DRP1E, also known as EDR3, ADL4 and ADL1E, which is 624 amino acid residues long, has a predicted mass of 69.8 kDa and a pI of 7.5.  Dynamin-related protein 1E belongs to a plant-specific subclass of dynamin-related proteins (DRP1), consisting of five members in Arabidopsis (A, B, C, D, E). This class is characterized by having an N-terminal GTPase domain, a central ëdynamin 2ë domain and a C-terminal GTPase effector domain (GED), a typical structure for plant dynamin-related proteins. However, this class lacks a PH domain and a proline-rich domain, which are found in classical animal dynamin-like proteins. Based on work on animal dynamins, the plant DRP1 proteins should be able to form polymeric structures that wrap around membranes to facilitate membrane tubulation and pinching off of vesicles, processes that are essential to vesicle trafficking and membrane compartmentalization.  The edr3 mutation causes a P77L substitution in the G2 motif of the GTPase domain of DRP1E.  edr3 mutant Arabidopsis plants display enhanced cell death in response to powdery mildew infection.; DYNAMIN-like 1E (DL1E); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: response to cadmium ion, vesicle-mediated transport, defense response to fungus; LOCATED IN: mitochondrion, plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130), Dynamin, GTPase domain (InterPro:IPR001401), Dynamin, GTPase region, conserved site (InterPro:IPR019762), GTPase effector domain, GED (InterPro:IPR020850), Dynamin central region (InterPro:IPR000375); BEST Arabidopsis thaliana protein match is: DYNAMIN-like 1D (TAIR:AT2G44590.3); Has 2915 Blast hits to 2753 proteins in 324 species: Archae - 2; Bacteria - 53; Metazoa - 1058; Fungi - 869; Plants - 577; Viruses - 0; Other Eukaryotes - 356 (source: NCBI BLink). & (reliability: 1258.0) &  (original description: no original description)","protein_coding"
"PSME_00029423-RA","No alias","Pseudotsuga menziesii","(at5g01750 : 173.0) Protein of unknown function (DUF567); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF567) (TAIR:AT3G11740.1); Has 468 Blast hits to 466 proteins in 44 species: Archae - 0; Bacteria - 29; Metazoa - 0; Fungi - 27; Plants - 412; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 346.0) &  (original description: no original description)","protein_coding"
"PSME_00029851-RA","No alias","Pseudotsuga menziesii","(at5g36170 : 369.0) Required for normal processing of polycistronic plastidial transcripts; high chlorophyll fluorescent 109 (HCF109); FUNCTIONS IN: translation release factor activity, codon specific, translation release factor activity; INVOLVED IN: translational termination, plastid organization, RNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Class I peptide chain release factor (InterPro:IPR000352), Peptide chain release factor 2 (InterPro:IPR004374), Peptide chain release factor (InterPro:IPR005139); BEST Arabidopsis thaliana protein match is: Peptide chain release factor 2 (TAIR:AT1G56350.1); Has 16243 Blast hits to 16243 proteins in 2786 species: Archae - 5; Bacteria - 10390; Metazoa - 230; Fungi - 206; Plants - 192; Viruses - 0; Other Eukaryotes - 5220 (source: NCBI BLink). & (reliability: 738.0) &  (original description: no original description)","protein_coding"
"PSME_00031650-RA","No alias","Pseudotsuga menziesii","(at5g36930 : 116.0) Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT5G17680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 222.0) &  (original description: no original description)","protein_coding"
"PSME_00032330-RA","No alias","Pseudotsuga menziesii","(p51091|ldox_maldo : 280.0) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX) (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) (Anthocyanidin synthase) - Malus domestica (Apple) (Malus sylvestris) & (at5g05600 : 277.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: response to salt stress, response to karrikin; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G11180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 554.0) &  (original description: no original description)","protein_coding"
"PSME_00032950-RA","No alias","Pseudotsuga menziesii","(at5g05600 : 258.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: response to salt stress, response to karrikin; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G11180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p51091|ldox_maldo : 256.0) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX) (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) (Anthocyanidin synthase) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 516.0) &  (original description: no original description)","protein_coding"
"PSME_00033339-RA","No alias","Pseudotsuga menziesii","(at2g25630 : 315.0) beta glucosidase 14 (BGLU14); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: pollen tube growth; LOCATED IN: plant-type cell wall; EXPRESSED IN: stem, male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 13 (TAIR:AT5G44640.1); Has 11270 Blast hits to 10932 proteins in 1458 species: Archae - 142; Bacteria - 7740; Metazoa - 715; Fungi - 202; Plants - 1454; Viruses - 0; Other Eukaryotes - 1017 (source: NCBI BLink). & (q00326|myro_brana : 228.0) Myrosinase precursor (EC 3.2.1.147) (Sinigrinase) (Thioglucosidase) - Brassica napus (Rape) & (reliability: 630.0) &  (original description: no original description)","protein_coding"
"PSME_00033608-RA","No alias","Pseudotsuga menziesii","(at3g62750 : 194.0) beta glucosidase 8 (BGLU8); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 7 (TAIR:AT3G62740.1); Has 11295 Blast hits to 10975 proteins in 1475 species: Archae - 142; Bacteria - 7812; Metazoa - 710; Fungi - 200; Plants - 1441; Viruses - 0; Other Eukaryotes - 990 (source: NCBI BLink). & (p49235|bglc_maize : 161.0) Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) & (reliability: 388.0) &  (original description: no original description)","protein_coding"
"PSME_00034280-RA","No alias","Pseudotsuga menziesii","(at1g09680 : 106.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G39710.1); Has 56278 Blast hits to 14858 proteins in 304 species: Archae - 3; Bacteria - 59; Metazoa - 821; Fungi - 925; Plants - 52616; Viruses - 0; Other Eukaryotes - 1854 (source: NCBI BLink). & (q76c99|rf1_orysa : 85.9) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 198.8) &  (original description: no original description)","protein_coding"
"PSME_00036839-RA","No alias","Pseudotsuga menziesii","(at5g05600 : 113.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: response to salt stress, response to karrikin; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G11180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q9xhg2|fls_maldo : 107.0) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23) (EC 1.14.11.9) (FLS) - Malus domestica (Apple) (Malus sylvestris) & (reliability: 226.0) &  (original description: no original description)","protein_coding"
"PSME_00038788-RA","No alias","Pseudotsuga menziesii","(at1g55850 : 582.0) encodes a protein similar to cellulose synthase; cellulose synthase like E1 (CSLE1); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: plant-type cell wall biogenesis, cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase like G2 (TAIR:AT4G24000.1); Has 2588 Blast hits to 1976 proteins in 305 species: Archae - 7; Bacteria - 382; Metazoa - 5; Fungi - 13; Plants - 2129; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). & (reliability: 1164.0) &  (original description: no original description)","protein_coding"
"PSME_00039217-RA","No alias","Pseudotsuga menziesii","(at1g52150 : 106.0) Member of the class III HD-ZIP protein family. Contains homeodomain and leucine zipper domain. Critical for vascular development and negatively regulates vascular cell differentiation.; ATHB-15; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), MEKHLA (InterPro:IPR013978), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox gene 8 (TAIR:AT4G32880.1); Has 3126 Blast hits to 3055 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 767; Fungi - 91; Plants - 2233; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 212.0) &  (original description: no original description)","protein_coding"
"PSME_00039469-RA","No alias","Pseudotsuga menziesii","(at3g16175 : 97.4) Thioesterase superfamily protein; CONTAINS InterPro DOMAIN/s: Thioesterase superfamily (InterPro:IPR006683); BEST Arabidopsis thaliana protein match is: Thioesterase superfamily protein (TAIR:AT1G52191.1); Has 298 Blast hits to 297 proteins in 61 species: Archae - 0; Bacteria - 6; Metazoa - 132; Fungi - 4; Plants - 150; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 194.8) &  (original description: no original description)","protein_coding"
"PSME_00040043-RA","No alias","Pseudotsuga menziesii","(at3g25520 : 178.0) Encodes ribosomal protein L5 that binds to 5S ribosomal RNA and in involved in its export from the nucleus to the cytoplasm. Identified in a screen for enhancers of as1. as1/pgy double mutants show defects in leaf vascular patterning and adaxial cell fate. Double mutant analysis indicates pgy genes function in the same pathway as REV, KAN1 and KAN2.; ribosomal protein L5 (ATL5); CONTAINS InterPro DOMAIN/s: Ribosomal protein L5, eukaryotic (InterPro:IPR005485), Ribosomal protein L18/L5 (InterPro:IPR005484); BEST Arabidopsis thaliana protein match is: ribosomal protein L5 B (TAIR:AT5G39740.2). & (q6unt2|rl5_cucsa : 173.0) 60S ribosomal protein L5 - Cucumis sativus (Cucumber) & (reliability: 356.0) &  (original description: no original description)","protein_coding"
"PSME_00042109-RA","No alias","Pseudotsuga menziesii","(at5g36930 : 115.0) Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT5G17680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 216.0) &  (original description: no original description)","protein_coding"
"PSME_00043948-RA","No alias","Pseudotsuga menziesii","(at1g63990 : 240.0) Encodes AtSPO11-2, one of the three Arabidopsis homologues of the archaeal DNA topoisomerase VIA subunit (topo VIA).  Required for meiotic recombination.  Plants homozygous for atspo11-2 exhibit a severe sterility phenotype.  Both male and female meiosis are severely disrupted in the atspo11-2 mutant, and this is associated with severe defects in synapsis during the first meiotic division and reduced meiotic recombination.  AtSPO11-1 and AtSPO11-2 have overlapping functions (i.e. both required for meiotic recombination) whereas AtSPO11-3 functions in DNA replication. Required for double-strand break induction.; sporulation 11-2 (SPO11-2); FUNCTIONS IN: DNA topoisomerase (ATP-hydrolyzing) activity, DNA binding, catalytic activity, ATP binding; INVOLVED IN: in 11 processes; LOCATED IN: chromosome; CONTAINS InterPro DOMAIN/s: Spo11/DNA topoisomerase VI, subunit A, N-terminal (InterPro:IPR013049), Spo11/DNA topoisomerase VI, subunit A (InterPro:IPR002815); BEST Arabidopsis thaliana protein match is: Spo11/DNA topoisomerase VI, subunit A protein (TAIR:AT5G02820.1); Has 890 Blast hits to 889 proteins in 304 species: Archae - 214; Bacteria - 14; Metazoa - 169; Fungi - 107; Plants - 162; Viruses - 0; Other Eukaryotes - 224 (source: NCBI BLink). & (reliability: 480.0) &  (original description: no original description)","protein_coding"
"PSME_00044700-RA","No alias","Pseudotsuga menziesii","(at2g36910 : 424.0) Belongs to the family of ATP-binding cassette (ABC) transporters. Also known as AtMDR1.Possibly regulates auxin-dependent responses by influencing basipetal auxin transport in the root.  Exerts nonredundant, partially overlapping functions with the ABC transporter encoded by AT3G28860.  PGP1 mediates cellular efflux of IAA and interacts with PIN genes that may confer an accelerated vectoral component to PGP-mediated transport. The non-polar localization of PGP1 at root and shoot apices, where IAA gradient-driven transport is impaired, may be required to confer directionality to auxin transport in those tissues.; ATP binding cassette subfamily B1 (ABCB1); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, calmodulin binding, auxin efflux transmembrane transporter activity; INVOLVED IN: in 10 processes; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ATP binding cassette subfamily B19 (TAIR:AT3G28860.1); Has 825599 Blast hits to 386427 proteins in 4134 species: Archae - 14573; Bacteria - 644325; Metazoa - 17752; Fungi - 12077; Plants - 9020; Viruses - 35; Other Eukaryotes - 127817 (source: NCBI BLink). & (q6yuu5|mdr_orysa : 247.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 848.0) &  (original description: no original description)","protein_coding"
"PSME_00048283-RA","No alias","Pseudotsuga menziesii","(at5g15350 : 107.0) early nodulin-like protein 17 (ENODL17); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to plasma membrane, plasma membrane, vacuole, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 19 (TAIR:AT4G12880.1); Has 1394 Blast hits to 1353 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1394; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 214.0) &  (original description: no original description)","protein_coding"
"PSME_00049691-RA","No alias","Pseudotsuga menziesii","(at3g54560 : 160.0) Encodes HTA11, a histone H2A protein.; histone H2A 11 (HTA11); FUNCTIONS IN: DNA binding; INVOLVED IN: flower development, detection of temperature stimulus, defense response to bacterium; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2A (InterPro:IPR002119), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: histone H2A 8 (TAIR:AT2G38810.2); Has 3864 Blast hits to 3859 proteins in 326 species: Archae - 0; Bacteria - 0; Metazoa - 2525; Fungi - 296; Plants - 612; Viruses - 2; Other Eukaryotes - 429 (source: NCBI BLink). & (q8s857|h2av2_orysa : 160.0) Probable histone H2A variant 2 - Oryza sativa (Rice) & (reliability: 320.0) &  (original description: no original description)","protein_coding"
"PSME_00050548-RA","No alias","Pseudotsuga menziesii","(o23814|gpx4_spiol : 119.0) Probable phospholipid hydroperoxide glutathione peroxidase (EC 1.11.1.12) (PHGPx) - Spinacia oleracea (Spinach) & (at4g11600 : 114.0) Encodes glutathione peroxidase.; glutathione peroxidase 6 (GPX6); FUNCTIONS IN: glutathione peroxidase activity; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to salt stress, response to metal ion; LOCATED IN: cytosol, mitochondrion, chloroplast, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Glutathione peroxidase (InterPro:IPR000889); BEST Arabidopsis thaliana protein match is: glutathione peroxidase 7 (TAIR:AT4G31870.1); Has 7601 Blast hits to 7600 proteins in 1766 species: Archae - 2; Bacteria - 3728; Metazoa - 790; Fungi - 210; Plants - 383; Viruses - 8; Other Eukaryotes - 2480 (source: NCBI BLink). & (reliability: 228.0) &  (original description: no original description)","protein_coding"
"PSME_00050572-RA","No alias","Pseudotsuga menziesii","(at5g53160 : 265.0) Encodes RCAR3, a regulatory component of ABA receptor.  Interacts with protein phosphatase 2Cs ABI1 and ABI2.  Stimulates ABA signaling.; regulatory components of ABA receptor 3 (RCAR3); CONTAINS InterPro DOMAIN/s: Polyketide cyclase/dehydrase (InterPro:IPR019587); BEST Arabidopsis thaliana protein match is: regulatory component of ABA receptor 1 (TAIR:AT1G01360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 530.0) &  (original description: no original description)","protein_coding"
"PSME_00050733-RA","No alias","Pseudotsuga menziesii","(p42056|vdac2_soltu : 213.0) 36 kDa outer mitochondrial membrane protein porin (Voltage-dependent anion-selective channel protein) (VDAC) (POM 36) - Solanum tuberosum (Potato) & (at3g01280 : 198.0) Encodes a voltage-dependent anion channel (VDAC: AT3G01280/VDAC1, AT5G67500/VDAC2, AT5G15090/VDAC3, AT5G57490/VDAC4, AT5G15090/VDAC5). VDACs are reported to be porin-type, beta-barrel diffusion pores. They are prominently localized in the outer mitochondrial membrane and are involved in metabolite exchange between the organelle and the cytosol.; voltage dependent anion channel 1 (VDAC1); FUNCTIONS IN: voltage-gated anion channel activity; INVOLVED IN: response to bacterium, anion transport; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Porin, eukaryotic type (InterPro:IPR001925); BEST Arabidopsis thaliana protein match is: voltage dependent anion channel 3 (TAIR:AT5G15090.2); Has 888 Blast hits to 888 proteins in 197 species: Archae - 0; Bacteria - 0; Metazoa - 413; Fungi - 146; Plants - 300; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (reliability: 396.0) &  (original description: no original description)","protein_coding"
"PSME_00053065-RA","No alias","Pseudotsuga menziesii","(at4g00030 : 240.0) Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); Has 184 Blast hits to 184 proteins in 36 species: Archae - 0; Bacteria - 11; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). & (reliability: 480.0) &  (original description: no original description)","protein_coding"
"Seita.1G013800.1","No alias","Setaria italica ","EC_3.2 glycosylase","protein_coding"
"Seita.1G047500.1","No alias","Setaria italica ","RNA editing factor *(MEF11)","protein_coding"
"Seita.1G068200.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G100900.1","No alias","Setaria italica ","component *(ARP6) of SWR1 chromatin remodeling complex","protein_coding"
"Seita.1G110200.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G178200.1","No alias","Setaria italica ","chromatin remodeling factor *(Rad5)","protein_coding"
"Seita.1G182600.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G285900.1","No alias","Setaria italica ","substrate specificity component *(CDC20) of APC/C E3 ubiquitin ligase complex","protein_coding"
"Seita.1G297100.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G375500.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G378900.1","No alias","Setaria italica ","homoserine kinase","protein_coding"
"Seita.2G031700.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G035600.1","No alias","Setaria italica ","meiotic crossover formation factor *(FANCD2)","protein_coding"
"Seita.2G117100.1","No alias","Setaria italica ","component *(BOP1) of ribosome PES-BOP1-WDR12 (PeBoW) complex","protein_coding"
"Seita.2G131400.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G166000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G167400.1","No alias","Setaria italica ","phosphometabolite transporter *(TPT/PPT/GPT/XPT)","protein_coding"
"Seita.2G177400.1","No alias","Setaria italica ","component *(KU70) of Ku70-Ku80 helicase complex","protein_coding"
"Seita.2G177900.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G178600.1","No alias","Setaria italica ","EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.2G188500.1","No alias","Setaria italica ","metallochaperone HCC of cytochrome c oxidase assembly","protein_coding"
"Seita.2G202400.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G203900.1","No alias","Setaria italica ","RNA editing factor *(OTP87)","protein_coding"
"Seita.2G231600.1","No alias","Setaria italica ","EC_1.3 oxidoreductase acting on CH-CH group of donor","protein_coding"
"Seita.2G310400.1","No alias","Setaria italica ","SETD-type lysine N-methyltransferase","protein_coding"
"Seita.2G311000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G314300.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G316600.1","No alias","Setaria italica ","component *(MSH4) of MSH4-MSH5 Holliday junction stabilizing heterodimer","protein_coding"
"Seita.2G327100.1","No alias","Setaria italica ","potassium cation transporter *(HAK/KUP/KT)","protein_coding"
"Seita.2G330600.1","No alias","Setaria italica ","exoribonuclease *(RRP6L)","protein_coding"
"Seita.2G411400.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G426900.1","No alias","Setaria italica ","RNA editing factor *(GRS1/EMP9)","protein_coding"
"Seita.3G011100.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G017100.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G050600.1","No alias","Setaria italica ","polymerase-II assembly factor *(RPAP3)","protein_coding"
"Seita.3G057300.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G064400.1","No alias","Setaria italica ","pectin acetylesterase *(PAE)","protein_coding"
"Seita.3G119800.1","No alias","Setaria italica ","LSU processome assembly factor *(NLE)","protein_coding"
"Seita.3G224900.1","No alias","Setaria italica ","component *(FtsZ2) of plastid division FtsZ prokaryotic-tubulin filaments","protein_coding"
"Seita.3G295600.1","No alias","Setaria italica ","ribonuclease *(RTL2)","protein_coding"
"Seita.3G356700.1","No alias","Setaria italica ","nucleobase cation transporter *(UPS)","protein_coding"
"Seita.3G370100.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.4G016800.1","No alias","Setaria italica ","SETD-type lysine N-methyltransferase","protein_coding"
"Seita.4G021400.1","No alias","Setaria italica ","component *(RAD1-LIKE) of 9-1-1 DNA damage sensor complex","protein_coding"
"Seita.4G027600.1","No alias","Setaria italica ","RNA editing factor *(COD1)","protein_coding"
"Seita.4G053300.1","No alias","Setaria italica ","clade D phosphatase & DLSV protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.4G101500.1","No alias","Setaria italica ","proton","protein_coding"
"Seita.5G010700.1","No alias","Setaria italica ","component *(NYC1) of chlorophyll b reductase complex","protein_coding"
"Seita.5G051500.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G059300.1","No alias","Setaria italica ","nucleocytoplasmic transport cargo adaptor protein *(IMP-alpha)","protein_coding"
"Seita.5G069200.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G071600.1","No alias","Setaria italica ","DNA double-strand break transducer kinase *(ATM)","protein_coding"
"Seita.5G085000.1","No alias","Setaria italica ","EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen","protein_coding"
"Seita.5G099900.1","No alias","Setaria italica ","component *(ARP5) of INO80 chromatin remodeling complex","protein_coding"
"Seita.5G136900.1","No alias","Setaria italica ","MYB-RELATED transcription factor *(ALY) & component *(ALY) of DREAM cell cycle regulatory complex","protein_coding"
"Seita.5G149200.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G222700.1","No alias","Setaria italica ","component *(YIP5) of trans-Golgi-network (TGN) trafficking complex","protein_coding"
"Seita.5G254600.1","No alias","Setaria italica ","RLCK-VIIa receptor-like protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.5G307600.1","No alias","Setaria italica ","component *(TAH18) of cytosolic CIA system assembly phase","protein_coding"
"Seita.5G320500.1","No alias","Setaria italica ","lipid-A-disaccharide synthase *(LpxB)","protein_coding"
"Seita.5G388800.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G446400.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.6G059000.1","No alias","Setaria italica ","component *(PSF3) of GINS DNA replication fork maintenance complex","protein_coding"
"Seita.6G059700.1","No alias","Setaria italica ","regulatory protein of DNA methylation pathway *(IDN/IDP)","protein_coding"
"Seita.6G072500.1","No alias","Setaria italica ","component *(FIE) of PRC2 histone methylation complex","protein_coding"
"Seita.6G195500.1","No alias","Setaria italica ","heme-o to heme-a conversion factor *(COX15) of cytochrome c oxidase assembly","protein_coding"
"Seita.6G251900.1","No alias","Setaria italica ","NAC-type transcription factor & regulatory factor *(AIF1) of anther dehiscence","protein_coding"
"Seita.7G002200.1","No alias","Setaria italica ","LRR-VIII-1 protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.7G114200.1","No alias","Setaria italica ","EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding"
"Seita.7G129800.1","No alias","Setaria italica ","poly(A)-specific ribonuclease *(PARN)","protein_coding"
"Seita.7G176100.1","No alias","Setaria italica ","component *(HUS1) of 9-1-1 DNA damage sensor complex","protein_coding"
"Seita.7G205600.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.7G242700.1","No alias","Setaria italica ","DNA exonuclease *(DPD1)","protein_coding"
"Seita.7G270100.1","No alias","Setaria italica ","component *(ECHIDNA) of trans-Golgi-network (TGN) trafficking complex","protein_coding"
"Seita.7G277500.1","No alias","Setaria italica ","serine carboxypeptidase & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding"
"Seita.7G322100.1","No alias","Setaria italica ","peroxisomal long-chain acyl-CoA synthetase & EC_6.2 ligase forming carbon-sulfur bond","protein_coding"
"Seita.7G324400.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.7G329200.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.8G166100.1","No alias","Setaria italica ","component *(uL4m) of large mitoribosomal-subunit proteome","protein_coding"
"Seita.9G012100.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G095100.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G124100.1","No alias","Setaria italica ","histone methyltransferase *(ASHR1)","protein_coding"
"Seita.9G128300.1","No alias","Setaria italica ","component *(PES) of ribosome PES-BOP1-WDR12 (PeBoW) complex","protein_coding"
"Seita.9G133700.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G172700.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G185400.1","No alias","Setaria italica ","tobamovirus multiplication replication host factor *(TOM1)","protein_coding"
"Seita.9G203100.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G231500.1","No alias","Setaria italica ","cofactor of plastid-encoded RNA polymerase *(PAP1/TAC3)","protein_coding"
"Seita.9G232900.1","No alias","Setaria italica ","chromatin remodeling factor *(ATRX)","protein_coding"
"Seita.9G247500.1","No alias","Setaria italica ","EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding"
"Seita.9G262800.1","No alias","Setaria italica ","EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding"
"Seita.9G268400.1","No alias","Setaria italica ","EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.9G285600.1","No alias","Setaria italica ","scaffold nucleoporin of nuclear pore complex *(NUP188)","protein_coding"
"Seita.9G288900.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G382000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G389100.1","No alias","Setaria italica ","amino acid transporter *(LAT)","protein_coding"
"Seita.9G407200.1","No alias","Setaria italica ","component *(RAD9) of 9-1-1 DNA damage sensor complex","protein_coding"
"Seita.9G442200.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G461400.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G477500.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G519500.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G530700.1","No alias","Setaria italica ","RNA editing factor *(MEF18)","protein_coding"
"Seita.9G537900.1","No alias","Setaria italica ","polyamine N-acetyltransferase *(NATA)","protein_coding"
"Sobic.001G009400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G017700.1","No alias","Sorghum bicolor ","diphthamide biosynthesis protein *(DPH2)","protein_coding"
"Sobic.001G054800.2","No alias","Sorghum bicolor ","linker histone *(H1)","protein_coding"
"Sobic.001G069300.2","No alias","Sorghum bicolor ","RNA editing factor *(DEK36)","protein_coding"
"Sobic.001G081300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G097400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G099200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G116800.1","No alias","Sorghum bicolor ","RNA editing factor *(OZ)","protein_coding"
"Sobic.001G138000.1","No alias","Sorghum bicolor ","hydroxymethylpyrimidine phosphate synthase *(ThiC)","protein_coding"
"Sobic.001G149100.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G151300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G156600.1","No alias","Sorghum bicolor ","DUF26 protein kinase & EC_2.7 transferase transferring phosphorus-containing group & L-lectin protein kinase","protein_coding"
"Sobic.001G179100.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G200600.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G212200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G256400.3","No alias","Sorghum bicolor ","RNA editing factor *(SLO1)","protein_coding"
"Sobic.001G267500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G268300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G305900.1","No alias","Sorghum bicolor ","component *(Toc90/120/132/159) of outer envelope TOC translocation system","protein_coding"
"Sobic.001G312700.1","No alias","Sorghum bicolor ","RNA editing factor *(MEF25)","protein_coding"
"Sobic.001G341300.2","No alias","Sorghum bicolor ","LON-type protease","protein_coding"
"Sobic.001G347100.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G368800.1","No alias","Sorghum bicolor ","diphthine methyl ester synthase *(DPH5) & EC_2.1 transferase transferring one-carbon group","protein_coding"
"Sobic.001G374800.1","No alias","Sorghum bicolor ","component *(RAD9) of 9-1-1 DNA damage sensor complex","protein_coding"
"Sobic.001G377200.1","No alias","Sorghum bicolor ","EC_2.4 glycosyltransferase","protein_coding"
"Sobic.001G391101.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G392100.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G479900.1","No alias","Sorghum bicolor ","regulatory component *(MCUR) of MCU calcium uniporter complex","protein_coding"
"Sobic.001G480400.1","No alias","Sorghum bicolor ","night-time repressor *(COR27)","protein_coding"
"Sobic.001G490700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G509700.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G003300.1","No alias","Sorghum bicolor ","component *(KU70) of Ku70-Ku80 helicase complex","protein_coding"
"Sobic.002G007800.1","No alias","Sorghum bicolor ","histone demethylase *(PKDM7)","protein_coding"
"Sobic.002G037900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G081900.1","No alias","Sorghum bicolor ","non-canonical Holliday junction resolvase *(HIGL)","protein_coding"
"Sobic.002G084400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G088800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G095800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G111700.6","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G167400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G172500.3","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G174900.1","No alias","Sorghum bicolor ","cysteine desulfurase component *(NFS1) of mitochondrial ISC system assembly phase & EC_2.8 transferase transferring sulfur-containing group","protein_coding"
"Sobic.002G177700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G193000.1","No alias","Sorghum bicolor ","component *(ELF4) of circadian clock Evening complex (EC)","protein_coding"
"Sobic.002G200500.3","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G254800.1","No alias","Sorghum bicolor ","type-1A topoisomerase TOP3b & topoisomerase component *(TOP3b) of TDRD3-TOP3B methyl-arginine reader complex","protein_coding"
"Sobic.002G365400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G389200.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G412300.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G414800.1","No alias","Sorghum bicolor ","RNA editing factor *(PPME)","protein_coding"
"Sobic.002G426400.1","No alias","Sorghum bicolor ","LON-type protease","protein_coding"
"Sobic.002G429400.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G070300.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G119100.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G121200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G128000.2","No alias","Sorghum bicolor ","RNA editing factor *(DYW2)","protein_coding"
"Sobic.003G142400.2","No alias","Sorghum bicolor ","RNA editing factor *(PGN)","protein_coding"
"Sobic.003G182400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G183900.1","No alias","Sorghum bicolor ","RNA editing factor *(OTP71)","protein_coding"
"Sobic.003G201000.1","No alias","Sorghum bicolor ","substrate adaptor of CUL4-based E3 ubiquitin ligase complex","protein_coding"
"Sobic.003G202700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G203100.1","No alias","Sorghum bicolor ","RNA editing factor *(MEF7)","protein_coding"
"Sobic.003G237100.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G248901.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G276500.1","No alias","Sorghum bicolor ","voltage-gated anion channel *(VDAC)","protein_coding"
"Sobic.003G277100.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G298400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G320100.1","No alias","Sorghum bicolor ","component *(mS78/mS79) of small mitoribosomal-subunit proteome","protein_coding"
"Sobic.003G333200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G358600.1","No alias","Sorghum bicolor ","cytosolic alpha-glucan phosphorylase & EC_2.4 glycosyltransferase","protein_coding"
"Sobic.003G377200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G380100.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G419800.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G027700.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G051600.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G141600.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G174800.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G199400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G216700.1","No alias","Sorghum bicolor ","circadian clock evening oscillator component *(TOC1) of circadian clock","protein_coding"
"Sobic.004G217900.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G241000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G255300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G256900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G282500.2","No alias","Sorghum bicolor ","mitochondrial RNA splicing factor *(OTP43)","protein_coding"
"Sobic.004G332800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G356600.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.005G024600.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.005G028300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.005G075800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.005G104900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.005G168300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.005G210700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.005G230400.2","No alias","Sorghum bicolor ","GRAS-type transcription factor","protein_coding"
"Sobic.006G085900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G089900.1","No alias","Sorghum bicolor ","RNA editing factor *(SLG1)","protein_coding"
"Sobic.006G095000.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G109400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G146400.4","No alias","Sorghum bicolor ","RNA editing factor *(MEF12)","protein_coding"
"Sobic.006G149500.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G155800.1","No alias","Sorghum bicolor ","component *(HUS1) of 9-1-1 DNA damage sensor complex","protein_coding"
"Sobic.006G178100.1","No alias","Sorghum bicolor ","tRNA pseudouridine synthase *(PUS10)","protein_coding"
"Sobic.006G265400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G271900.1","No alias","Sorghum bicolor ","component *(MSH3) of MSH2-x mismatch repair heterodimers","protein_coding"
"Sobic.007G013200.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.007G069101.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.007G114700.3","No alias","Sorghum bicolor ","mTERF-type transcription factor","protein_coding"
"Sobic.007G145000.1","No alias","Sorghum bicolor ","phosphoglycerate dehydrogenase & EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding"
"Sobic.007G179600.1","No alias","Sorghum bicolor ","RNA editing factor *(OTP72)","protein_coding"
"Sobic.007G182600.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.007G191600.1","No alias","Sorghum bicolor ","component *(RRP43) of exosome EXO9 core complex","protein_coding"
"Sobic.007G208400.1","No alias","Sorghum bicolor ","RNA editing factor *(REME1)","protein_coding"
"Sobic.007G216401.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.008G031200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.008G041000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.008G075100.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.008G100700.1","No alias","Sorghum bicolor ","cofactor component *(GIF) of GRF-GIF transcriptional complex","protein_coding"
"Sobic.008G123200.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.008G149200.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.008G163400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.008G171500.3","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G013800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G014500.3","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G025200.1","No alias","Sorghum bicolor ","E3 ubiquitin ligase *(UPL3)","protein_coding"
"Sobic.009G031300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G034000.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G042500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G130100.1","No alias","Sorghum bicolor ","basic chitinase *(CHIB)","protein_coding"
"Sobic.009G140400.1","No alias","Sorghum bicolor ","RNA editing factor *(MEF35)","protein_coding"
"Sobic.009G155400.3","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G163600.1","No alias","Sorghum bicolor ","component *(RRP41) of exosome EXO9 core complex","protein_coding"
"Sobic.009G165500.1","No alias","Sorghum bicolor ","G-protein-coupled receptor-like regulator (7TM)","protein_coding"
"Sobic.009G201800.1","No alias","Sorghum bicolor ","nucleoporin of nuclear pore complex *(NUP35)","protein_coding"
"Sobic.009G210900.1","No alias","Sorghum bicolor ","EC_3.2 glycosylase","protein_coding"
"Sobic.009G218700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.010G020900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.010G021900.1","No alias","Sorghum bicolor ","component *(RAD1-LIKE) of 9-1-1 DNA damage sensor complex","protein_coding"
"Sobic.010G028700.2","No alias","Sorghum bicolor ","RNA editing factor *(COD1)","protein_coding"
"Sobic.010G066900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.010G068900.2","No alias","Sorghum bicolor ","ligand-gated cation channel *(GLR)","protein_coding"
"Sobic.010G085900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.010G181000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.010G190900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.010G206000.1","No alias","Sorghum bicolor ","solute transporter *(AAAP)","protein_coding"
"Sobic.010G232700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.010G244400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.010G250100.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.010G252700.1","No alias","Sorghum bicolor ","component *(APC2) of (APC/C)-dependent ubiquitination catalytic core subcomplex","protein_coding"
"Sobic.010G277000.1","No alias","Sorghum bicolor ","component *(RRP42) of exosome EXO9 core complex","protein_coding"
"Sobic.010G277300.1","No alias","Sorghum bicolor ","sterol delta24 reductase","protein_coding"
"Solyc01g005400","No alias","Solanum lycopersicum","Caleosin-related family protein (AHRD V3.3 *** AT1G70670.1)","protein_coding"
"Solyc01g005700","No alias","Solanum lycopersicum","Mutator-like transposase-like protein (AHRD V3.3 *** Q9FI74_ARATH)","protein_coding"
"Solyc01g007820","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc01g008170","No alias","Solanum lycopersicum","Zinc finger transcription factor  5","protein_coding"
"Solyc01g010750","No alias","Solanum lycopersicum","Hop-interacting protein THI113 (AHRD V3.3 *** G8Z279_SOLLC)","protein_coding"
"Solyc01g010970","No alias","Solanum lycopersicum","Argonaute7","protein_coding"
"Solyc01g049830","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc01g057000","No alias","Solanum lycopersicum","Universal stress protein","protein_coding"
"Solyc01g060110","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc01g060290","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc01g066060","No alias","Solanum lycopersicum","DAG protein (AHRD V3.3 *** K7TSG0_MAIZE)","protein_coding"
"Solyc01g074010","No alias","Solanum lycopersicum","Protein kinase superfamily protein (AHRD V3.3 *** AT2G32850.2)","protein_coding"
"Solyc01g081080","No alias","Solanum lycopersicum","Replication factor C subunit, putative (AHRD V3.3 *-* B9T608_RICCO)","protein_coding"
"Solyc01g086720","No alias","Solanum lycopersicum","C2 domain-containing family protein (AHRD V3.3 *** B9GFS0_POPTR)","protein_coding"
"Solyc01g088080","No alias","Solanum lycopersicum","T-complex protein 1 subunit theta (AHRD V3.3 *** W9RAQ1_9ROSA)","protein_coding"
"Solyc01g090750","No alias","Solanum lycopersicum","T-complex protein 1 alpha subunit (AHRD V3.3 *** AT3G20050.1)","protein_coding"
"Solyc01g095480","No alias","Solanum lycopersicum","Exosome complex exonuclease RRP41, putative (AHRD V3.3 *** B9SWZ0_RICCO)","protein_coding"
"Solyc01g095660","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc01g097130","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9RNF3_RICCO)","protein_coding"
"Solyc01g097490","No alias","Solanum lycopersicum","LOW QUALITY:SUN domain protein 4","protein_coding"
"Solyc01g098050","No alias","Solanum lycopersicum","MADS-box transcription factor family protein (AHRD V3.3 *-* AT1G72350.1)","protein_coding"
"Solyc01g099460","No alias","Solanum lycopersicum","RecQ family ATP-dependent DNA helicase (AHRD V3.3 *** G7I8P0_MEDTR)","protein_coding"
"Solyc01g101260","No alias","Solanum lycopersicum","DNA-(apurinic or apyrimidinic site) lyase (AHRD V3.3 --* A0A067FYM9_CITSI)","protein_coding"
"Solyc01g103010","No alias","Solanum lycopersicum","Cullin-associated NEDD8-dissociated protein 1 (AHRD V3.3 *** CAND1_ARATH)","protein_coding"
"Solyc01g104010","No alias","Solanum lycopersicum","LOW QUALITY:BPS1-like protein (AHRD V3.3 *** AT1G22030.1)","protein_coding"
"Solyc01g105320","No alias","Solanum lycopersicum","Metacaspase 1, putative (AHRD V3.3 *** A0A061E359_THECC),Pfam:PF00656","protein_coding"
"Solyc01g109010","No alias","Solanum lycopersicum","Sorting nexin-16 (AHRD V3.3 *-* A0A0B2RCD7_GLYSO)","protein_coding"
"Solyc02g021650","No alias","Solanum lycopersicum","UV damaged DNA binding protein 1","protein_coding"
"Solyc02g037540","No alias","Solanum lycopersicum","Disease resistance protein (AHRD V3.3 *** W9R405_9ROSA)","protein_coding"
"Solyc02g055510","No alias","Solanum lycopersicum","LOW QUALITY:PIF1-like helicase (AHRD V3.3 *** G7JQP0_MEDTR)","protein_coding"
"Solyc02g063370","No alias","Solanum lycopersicum","Calcium-dependent lipid-binding domain-containing protein (AHRD V3.3 *** F4K8L6_ARATH)","protein_coding"
"Solyc02g067910","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc02g069590","No alias","Solanum lycopersicum","Coatomer epsilon subunit (AHRD V3.3 *** AT1G30630.1)","protein_coding"
"Solyc02g069840","No alias","Solanum lycopersicum","50S ribosomal protein L20 (AHRD V3.3 *** A0A0V0GV30_SOLCH)","protein_coding"
"Solyc02g071130","No alias","Solanum lycopersicum","WRKY transcription factor 71","protein_coding"
"Solyc02g071310","No alias","Solanum lycopersicum","AWPM-19-like membrane family protein (AHRD V3.3 *** B9N9D5_POPTR)","protein_coding"
"Solyc02g072180","No alias","Solanum lycopersicum","Rab family GTPase (AHRD V3.3 *** D8SVZ0_SELML)","protein_coding"
"Solyc02g081320","No alias","Solanum lycopersicum","Protein SET DOMAIN GROUP, putative (AHRD V3.3 *** B9T3H1_RICCO)","protein_coding"
"Solyc02g081940","No alias","Solanum lycopersicum","RNA binding protein (AHRD V3.3 *** A0A0K9P1B7_ZOSMR)","protein_coding"
"Solyc02g094740","No alias","Solanum lycopersicum","LOW QUALITY:TPX2 (targeting protein for Xklp2) protein family (AHRD V3.3 *-* AT5G15510.1)","protein_coding"
"Solyc03g005290","No alias","Solanum lycopersicum","weak chloroplast movement under blue light protein (DUF827) (AHRD V3.3 --* AT3G02930.3)","protein_coding"
"Solyc03g043790","No alias","Solanum lycopersicum","LOW QUALITY:Protein TIC 214 (AHRD V3.3 --* TI214_NASOF)","protein_coding"
"Solyc03g051940","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc03g062650","No alias","Solanum lycopersicum","thyroid adenoma-associated-like protein (AHRD V3.3 *** AT3G55160.3)","protein_coding"
"Solyc03g071780","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc03g082700","No alias","Solanum lycopersicum","Oligopeptide transporter, putative (AHRD V3.3 *** B9RYS3_RICCO)","protein_coding"
"Solyc03g111580","No alias","Solanum lycopersicum","Zinc finger transcription factor 27","protein_coding"
"Solyc03g113710","No alias","Solanum lycopersicum","Formin-like protein (AHRD V3.3 *** K4BKM3_SOLLC)","protein_coding"
"Solyc03g115300","No alias","Solanum lycopersicum","Expansin (AHRD V3.3 *** Q9ZTG7_SOLLC)","protein_coding"
"Solyc03g117530","No alias","Solanum lycopersicum","Hus1-like protein (AHRD V3.3 *** A0A097PQI1_SOLLC)","protein_coding"
"Solyc03g118910","No alias","Solanum lycopersicum","T-complex protein 1 subunit delta (AHRD V3.3 *** K4BM40_SOLLC)","protein_coding"
"Solyc03g120170","No alias","Solanum lycopersicum","NHL domain-containing protein, putative (AHRD V3.3 --* A0A061EBN2_THECC)","protein_coding"
"Solyc03g120530","No alias","Solanum lycopersicum","basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AHRD V3.3 *-* AT4G29100.1)","protein_coding"
"Solyc03g122080","No alias","Solanum lycopersicum","DUF936 family protein (AHRD V3.3 *** A0A072THZ7_MEDTR)","protein_coding"
"Solyc04g005420","No alias","Solanum lycopersicum","Glucan endo-1,3-beta-glucosidase-like protein (AHRD V3.3 *-* A0A0B2SF50_GLYSO)","protein_coding"
"Solyc04g007220","No alias","Solanum lycopersicum","translocase subunit seca (AHRD V3.3 *** AT1G68490.1)","protein_coding"
"Solyc04g008680","No alias","Solanum lycopersicum","DBC1/CARP1-like protein (AHRD V3.3 *** A0A103XRU5_CYNCS)","protein_coding"
"Solyc04g009120","No alias","Solanum lycopersicum","Nbs-lrr resistance protein (AHRD V3.3 *** A0A061FZT5_THECC)","protein_coding"
"Solyc04g026070","No alias","Solanum lycopersicum","LOW QUALITY:Hus1-like protein (AHRD V3.3 *-* A0A097PQH0_SOLTU)","protein_coding"
"Solyc04g051830","No alias","Solanum lycopersicum","Developmentally-regulated GTP-binding protein 1 (AHRD V3.3 *** A0A0B2PPN5_GLYSO)","protein_coding"
"Solyc04g054150","No alias","Solanum lycopersicum","Nuclear transcription factor Y protein (AHRD V3.3 *** G7LB97_MEDTR)","protein_coding"
"Solyc04g054720","No alias","Solanum lycopersicum","APOLLO (AHRD V3.3 *-* U5U5S3_9BRAS)","protein_coding"
"Solyc04g064560","No alias","Solanum lycopersicum","Small RNA degrading nuclease (AHRD V3.3 *** A0A072VFB2_MEDTR)","protein_coding"
"Solyc04g071320","No alias","Solanum lycopersicum","ubiquitin interaction motif-containing protein (AHRD V3.3 *** AT1G43690.1)","protein_coding"
"Solyc04g071920","No alias","Solanum lycopersicum","Protein kinase-like protein (AHRD V3.3 *** A0A087GP50_ARAAL)","protein_coding"
"Solyc04g080160","No alias","Solanum lycopersicum","COP9 signalosome complex subunit 4 (AHRD V3.3 *** S5QCB8_TOBAC)","protein_coding"
"Solyc04g080610","No alias","Solanum lycopersicum","ornithine carbamoyltransferase","protein_coding"
"Solyc04g082750","No alias","Solanum lycopersicum","3-beta-hydroxy-delta5-steroid dehydrogenase (AHRD V3.3 *** K7WNV1_SOLTU)","protein_coding"
"Solyc05g007520","No alias","Solanum lycopersicum","Cold acclimation protein WCOR518, related (AHRD V3.3 *** Q6L3L4_SOLDE)","protein_coding"
"Solyc05g012200","No alias","Solanum lycopersicum","Asparagine synthetase, putative (AHRD V3.3 *** B9REC9_RICCO)","protein_coding"
"Solyc05g012550","No alias","Solanum lycopersicum","Remorin family protein (AHRD V3.3 *-* AT5G61280.2)","protein_coding"
"Solyc05g013850","No alias","Solanum lycopersicum","Sieve element occlusion c (AHRD V3.3 *** E2FKK0_9SOLN)","protein_coding"
"Solyc05g013990","No alias","Solanum lycopersicum","T-complex protein 1 (AHRD V3.3 *** B9HTF6_POPTR)","protein_coding"
"Solyc05g014100","No alias","Solanum lycopersicum","F-box family protein (AHRD V3.3 --* AT3G06240.1)","protein_coding"
"Solyc05g016390","No alias","Solanum lycopersicum","Carbohydrate-binding X8 domain superfamily protein (AHRD V3.3 *-* AT1G79480.2)","protein_coding"
"Solyc05g018540","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc05g018600","No alias","Solanum lycopersicum","Actin-related protein (AHRD V3.3 *** A0A103XN71_CYNCS)","protein_coding"
"Solyc05g050810","No alias","Solanum lycopersicum","DnaJ protein (AHRD V3.3 *-* A0A199V3N0_ANACO)","protein_coding"
"Solyc06g008770","No alias","Solanum lycopersicum","CNL4","protein_coding"
"Solyc06g008940","No alias","Solanum lycopersicum","Elongation factor Tu (AHRD V3.3 *** K4C3S4_SOLLC)","protein_coding"
"Solyc06g018110","No alias","Solanum lycopersicum","RNA binding protein","protein_coding"
"Solyc06g043070","No alias","Solanum lycopersicum","FMN-binding split barrel (AHRD V3.3 *** A0A103YIL6_CYNCS)","protein_coding"
"Solyc06g048610","No alias","Solanum lycopersicum","Nucleic acid-binding, OB-fold-like protein (AHRD V3.3 *** Q93VB0_ARATH)","protein_coding"
"Solyc06g065520","No alias","Solanum lycopersicum","T-complex protein 1 subunit eta (AHRD V3.3 *** TCPH_ARATH)","protein_coding"
"Solyc06g073410","No alias","Solanum lycopersicum","gamma-secretase subunit APH1-like protein (AHRD V3.3 *** AT2G31440.2)","protein_coding"
"Solyc06g074480","No alias","Solanum lycopersicum","Protein kinase (AHRD V3.3 *-* A0A0K9NMI8_ZOSMR)","protein_coding"
"Solyc06g075330","No alias","Solanum lycopersicum","LOB domain-containing protein, putative (AHRD V3.3 *** B9SK21_RICCO)","protein_coding"
"Solyc06g075820","No alias","Solanum lycopersicum","LOW QUALITY:Protein yippee-like (AHRD V3.3 *** K4C9V4_SOLLC)","protein_coding"
"Solyc06g083730","No alias","Solanum lycopersicum","Nuclear transport factor 2 family protein with RNA binding domain (AHRD V3.3 *** A0A061DNP4_THECC)","protein_coding"
"Solyc07g005540","No alias","Solanum lycopersicum","LRR receptor-like kinase family protein (AHRD V3.3 *** G7JGQ5_MEDTR)","protein_coding"
"Solyc07g006760","No alias","Solanum lycopersicum","MAP kinase kinase kinase 43","protein_coding"
"Solyc07g008460","No alias","Solanum lycopersicum","Histone-lysine N-methyltransferase (AHRD V3.3 *** A0A0K9P7Y1_ZOSMR)","protein_coding"
"Solyc07g016030","No alias","Solanum lycopersicum","Purple acid phosphatase (AHRD V3.3 *-* A0A0D9ZFS8_9ORYZ)","protein_coding"
"Solyc07g032170","No alias","Solanum lycopersicum","alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *-* AT4G24160.2)","protein_coding"
"Solyc07g032250","No alias","Solanum lycopersicum","AT4G29520-like protein (AHRD V3.3 *** A0A097PSU3_SOLLC)","protein_coding"
"Solyc07g042270","No alias","Solanum lycopersicum","RNA helicase DEAD22","protein_coding"
"Solyc07g047860","No alias","Solanum lycopersicum","Nuclear pore complex protein NUP133 (AHRD V3.3 *** NU133_ARATH)","protein_coding"
"Solyc07g049480","No alias","Solanum lycopersicum","Cleavage and polyadenylation specificity factor family protein (AHRD V3.3 *** B9IJR9_POPTR)","protein_coding"
"Solyc07g049550","No alias","Solanum lycopersicum","1-aminocyclopropane-1-carboxylate oxidase 1 (AHRD V3.3 *** ACCO1_SOLLC)","protein_coding"
"Solyc07g052240","No alias","Solanum lycopersicum","L-ascorbate oxidase-like protein (AHRD V3.3 *** A2Q4H7_MEDTR)","protein_coding"
"Solyc07g054720","No alias","Solanum lycopersicum","Type II proteinase inhibitor family protein (AHRD V3.3 -** B6SSS5_MAIZE)","protein_coding"
"Solyc07g054830","No alias","Solanum lycopersicum","diacylglycerol kinase","protein_coding"
"Solyc07g056650","No alias","Solanum lycopersicum","Interactor of constitutive active ROPs protein, putative (AHRD V3.3 *** A0A072V8T5_MEDTR)","protein_coding"
"Solyc07g062590","No alias","Solanum lycopersicum","Hexosyltransferase (AHRD V3.3 *** K4CGU2_SOLLC)","protein_coding"
"Solyc07g064240","No alias","Solanum lycopersicum","Early nodulin-like protein (AHRD V3.3 *** A0A072VAV5_MEDTR)","protein_coding"
"Solyc07g066670","No alias","Solanum lycopersicum","Ent-kaurene synthase (AHRD V3.3 *-* G5CV50_SOLLC)","protein_coding"
"Solyc08g006430","No alias","Solanum lycopersicum","Arginine/serine-rich splicing factor, putative (AHRD V3.3 *-* B9RNP5_RICCO)","protein_coding"
"Solyc08g041720","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc08g044480","No alias","Solanum lycopersicum","LOW QUALITY:Hus1-like protein (AHRD V3.3 *-* A0A097PQH0_SOLTU)","protein_coding"
"Solyc08g059800","No alias","Solanum lycopersicum","TPX2 (targeting protein for Xklp2) protein family (AHRD V3.3 *** AT4G32330.4)","protein_coding"
"Solyc08g062980","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc08g067210","No alias","Solanum lycopersicum","Dicer-like 3","protein_coding"
"Solyc08g068640","No alias","Solanum lycopersicum","Decarboxylase family protein  IPR002129  Pyridoxal phosphate-dependent decarboxylase","protein_coding"
"Solyc08g077690","No alias","Solanum lycopersicum","Chromatin remodeling 31, putative (AHRD V3.3 *** A0A061FRH7_THECC)","protein_coding"
"Solyc08g080500","No alias","Solanum lycopersicum","Rhomboid-like protein (AHRD V3.3 *** K4CP50_SOLLC)","protein_coding"
"Solyc08g080870","No alias","Solanum lycopersicum","heavy metal atpase 5 (AHRD V3.3 *** AT1G63440.1)","protein_coding"
"Solyc08g081180","No alias","Solanum lycopersicum","Signal peptide peptidase-like protein (AHRD V3.3 *** A0A072UBU3_MEDTR)","protein_coding"
"Solyc09g005100","No alias","Solanum lycopersicum","Transcription factor bHLH140-like protein (AHRD V3.3 *** G7I746_MEDTR)","protein_coding"
"Solyc09g005610","No alias","Solanum lycopersicum","transcription factor-like protein (AHRD V3.3 *** AT1G58330.1)","protein_coding"
"Solyc09g008610","No alias","Solanum lycopersicum","ER membrane protein complex subunit 1 (AHRD V3.3 *** A0A199VQY4_ANACO)","protein_coding"
"Solyc09g008850","No alias","Solanum lycopersicum","Uridylate kinase (AHRD V3.3 *** W9SIW1_9ROSA)","protein_coding"
"Solyc09g020150","No alias","Solanum lycopersicum","Glycine--tRNA ligase beta subunit (AHRD V3.3 *** A0A1D1YWE6_9ARAE)","protein_coding"
"Solyc09g031880","No alias","Solanum lycopersicum","galacturonic acid kinase (AHRD V3.3 *** AT3G10700.3)","protein_coding"
"Solyc09g047850","No alias","Solanum lycopersicum","LOW QUALITY:zein-binding protein (Protein of unknown function, DUF593) (AHRD V3.3 --* AT4G13630.2)","protein_coding"
"Solyc09g055460","No alias","Solanum lycopersicum","50S ribosomal protein L20 (AHRD V3.3 *-* A0A0V0GV30_SOLCH)","protein_coding"
"Solyc09g058970","No alias","Solanum lycopersicum","LOW QUALITY:P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 --* AT1G08600.4)","protein_coding"
"Solyc09g059960","No alias","Solanum lycopersicum","GPI transamidase component Gpi16 subunit family protein (AHRD V3.3 *** AT3G07140.1)","protein_coding"
"Solyc09g064160","No alias","Solanum lycopersicum","Flavin-containing monooxygenase (AHRD V3.3 *** K4CU47_SOLLC)","protein_coding"
"Solyc09g072840","No alias","Solanum lycopersicum","Heavy metal-associated domain containing protein, expressed (AHRD V3.3 --* H2KVZ0_ORYSJ)","protein_coding"
"Solyc09g091020","No alias","Solanum lycopersicum","Transducin/WD-like repeat-protein (AHRD V3.3 *** G7KYK1_MEDTR)","protein_coding"
"Solyc09g091150","No alias","Solanum lycopersicum","F-box family protein (AHRD V3.3 *-* A0A061EM39_THECC)","protein_coding"
"Solyc09g091160","No alias","Solanum lycopersicum","F-box domain containing protein (AHRD V3.3 *-* B6TYX2_MAIZE)","protein_coding"
"Solyc09g092140","No alias","Solanum lycopersicum","Methyltransferase-like protein 13 (AHRD V3.3 *** W9QL05_9ROSA)","protein_coding"
"Solyc09g092410","No alias","Solanum lycopersicum","Disease resistance protein (TIR-NBS-LRR class) family (AHRD V3.3 *** AT5G36930.2)","protein_coding"
"Solyc10g006170","No alias","Solanum lycopersicum","Rcd1-like cell differentiation family protein (AHRD V3.3 *-* B9GJH1_POPTR)","protein_coding"
"Solyc10g009350","No alias","Solanum lycopersicum","MAP kinase kinase kinase 73","protein_coding"
"Solyc10g044780","No alias","Solanum lycopersicum","cell cycle checkpoint control protein family (AHRD V3.3 *** AT3G05480.1)","protein_coding"
"Solyc10g051130","No alias","Solanum lycopersicum","Protein DETOXIFICATION (AHRD V3.3 *** K4D0R6_SOLLC)","protein_coding"
"Solyc10g054860","No alias","Solanum lycopersicum","Urb2/Npa2, putative isoform 2 (AHRD V3.3 *** A0A061E0C3_THECC)","protein_coding"
"Solyc10g061860","No alias","Solanum lycopersicum","Protein kinase superfamily protein (AHRD V3.3 *-* AT3G56760.1)","protein_coding"
"Solyc10g078460","No alias","Solanum lycopersicum","phosphatidylinositol- 4-phosphate 5-kinase 5 (AHRD V3.3 *** AT2G41210.1)","protein_coding"
"Solyc10g078680","No alias","Solanum lycopersicum","C2 calcium/lipid-binding and GRAM domain protein (AHRD V3.3 *** A0A072TGP1_MEDTR)","protein_coding"
"Solyc10g079430","No alias","Solanum lycopersicum","U3 small nucleolar RNA-associated protein 11 (AHRD V3.3 *** A5B5S2_VITVI)","protein_coding"
"Solyc10g083800","No alias","Solanum lycopersicum","RING/FYVE/PHD zinc finger protein (AHRD V3.3 *** A0A072VVJ3_MEDTR)","protein_coding"
"Solyc11g006400","No alias","Solanum lycopersicum","Mitochondrial glycoprotein family protein, putative (AHRD V3.3 *** A0A061G4T0_THECC)","protein_coding"
"Solyc11g007780","No alias","Solanum lycopersicum","SEC12-like protein 1 (AHRD V3.3 *** A0A0B2S0C4_GLYSO)","protein_coding"
"Solyc11g008710","No alias","Solanum lycopersicum","Ribosomal protein S5 family protein (AHRD V3.3 *** A0A061F6Z5_THECC)","protein_coding"
"Solyc11g012090","No alias","Solanum lycopersicum","Autophagy-related protein 9 (AHRD V3.3 *** A0A1D1ZI98_9ARAE)","protein_coding"
"Solyc11g040060","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A199VXB2_ANACO)","protein_coding"
"Solyc11g062360","No alias","Solanum lycopersicum","Transferring glycosyl group transferase, putative (AHRD V3.3 *** G7L963_MEDTR)","protein_coding"
"Solyc11g069930","No alias","Solanum lycopersicum","Disease resistance protein (AHRD V3.3 *-* B3IYJ6_CAPCH)","protein_coding"
"Solyc11g070140","No alias","Solanum lycopersicum","Protein kinase (AHRD V3.3 *** A0A059LJU4_9CHLO)","protein_coding"
"Solyc11g071540","No alias","Solanum lycopersicum","TATA box-binding protein associated factor RNA polymerase I subunit B-like protein (AHRD V3.3 *** A0A072UJP8_MEDTR)","protein_coding"
"Solyc12g006250","No alias","Solanum lycopersicum","Protein transport protein SFT2, putative (AHRD V3.3 *** B9SF26_RICCO)","protein_coding"
"Solyc12g006710","No alias","Solanum lycopersicum","Tudor domain protein (AHRD V3.3 *** A0A072V9B3_MEDTR)","protein_coding"
"Solyc12g008860","No alias","Solanum lycopersicum","transmembrane protein (AHRD V3.3 *-* AT4G29735.1)","protein_coding"
"Solyc12g013880","No alias","Solanum lycopersicum","origin recognition complex subunit 3 (AHRD V3.3 *** AT5G16690.1)","protein_coding"
"Solyc12g013990","No alias","Solanum lycopersicum","Protein kinase, putative (AHRD V3.3 *-* B9SRD1_RICCO)","protein_coding"
"Solyc12g027540","No alias","Solanum lycopersicum","Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A151RVI7_CAJCA)","protein_coding"
"Solyc12g035590","No alias","Solanum lycopersicum","LOW QUALITY:NAD(P)H-quinone oxidoreductase subunit H, chloroplastic (AHRD V3.3 *-* NDHH_TOBAC)","protein_coding"
"Solyc12g035840","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc12g044410","No alias","Solanum lycopersicum","Homeobox leucine-zipper protein (AHRD V3.3 *** Q76CL1_ZINVI)","protein_coding"
"Solyc12g063050","No alias","Solanum lycopersicum","RNA polymerase II C-terminal domain phosphatase-like 3, putative (AHRD V3.3 *** A0A061E5T0_THECC)","protein_coding"
"Solyc12g099300","No alias","Solanum lycopersicum","LOW QUALITY:transmembrane protein, putative (DUF247) (AHRD V3.3 *** AT3G50150.1)","protein_coding"
"Sopen03g036430","No alias","Solanum pennellii","Hus1-like protein","protein_coding"
"Sopen08g025160","No alias","Solanum pennellii","Repair protein Rad1/Rec1/Rad17","protein_coding"
"Sopen10g013470","No alias","Solanum pennellii","Rad9","protein_coding"