"sequence_id","alias","species","description","type"
"105813","No alias","Selaginella moellendorffii ","4\'-phosphopantetheinyl transferase superfamily","protein_coding"
"107558","No alias","Selaginella moellendorffii ","cytochrome P450, family 78, subfamily A, polypeptide 7","protein_coding"
"107700","No alias","Selaginella moellendorffii ","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"107896","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"112137","No alias","Selaginella moellendorffii ","PREFOLDIN 1","protein_coding"
"113076","No alias","Selaginella moellendorffii ","alpha carbonic anhydrase 2","protein_coding"
"115266","No alias","Selaginella moellendorffii ","xyloglucan endotransglucosylase/hydrolase 28","protein_coding"
"115352","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"115961","No alias","Selaginella moellendorffii ","Nucleic acid-binding, OB-fold-like protein","protein_coding"
"12440","No alias","Selaginella moellendorffii ","Cytochrome P450 superfamily protein","protein_coding"
"126833","No alias","Selaginella moellendorffii ","Peroxidase superfamily protein","protein_coding"
"132803","No alias","Selaginella moellendorffii ","carotenoid cleavage dioxygenase 1","protein_coding"
"133784","No alias","Selaginella moellendorffii ","Major facilitator superfamily protein","protein_coding"
"134587","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"136113","No alias","Selaginella moellendorffii ","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"141552","No alias","Selaginella moellendorffii ","Stress induced protein","protein_coding"
"146445","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"149567","No alias","Selaginella moellendorffii ","4\'-phosphopantetheinyl transferase superfamily","protein_coding"
"15470","No alias","Selaginella moellendorffii ","phosphoenolpyruvate carboxylase-related kinase 1","protein_coding"
"164290","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"165537","No alias","Selaginella moellendorffii ","Protein of unknown function (DUF833)","protein_coding"
"230552","No alias","Selaginella moellendorffii ","tryptophan biosynthesis 1","protein_coding"
"233394","No alias","Selaginella moellendorffii ","O-Glycosyl hydrolases family 17 protein","protein_coding"
"36607","No alias","Selaginella moellendorffii ","Leucine-rich repeat transmembrane protein kinase family protein","protein_coding"
"402286","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"402524","No alias","Selaginella moellendorffii ","crinkly4","protein_coding"
"403427","No alias","Selaginella moellendorffii ","poly(ADP-ribose) polymerase","protein_coding"
"405817","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"405840","No alias","Selaginella moellendorffii ","hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase","protein_coding"
"406662","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"407017","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"407485","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"408446","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"409562","No alias","Selaginella moellendorffii ","chitinase A","protein_coding"
"410445","No alias","Selaginella moellendorffii ","cytochrome P450, family 709, subfamily B, polypeptide 2","protein_coding"
"410458","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"411435","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"412030","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"412474","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"412738","No alias","Selaginella moellendorffii ","AP2/B3-like transcriptional factor family protein","protein_coding"
"413789","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"415101","No alias","Selaginella moellendorffii ","casein kinase I-like 7","protein_coding"
"415214","No alias","Selaginella moellendorffii ","zinc finger (C3HC4-type RING finger) family protein / BRCT domain-containing protein","protein_coding"
"415608","No alias","Selaginella moellendorffii ","Protein of Unknown Function (DUF239)","protein_coding"
"417650","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"418963","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"419481","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"419520","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"420448","No alias","Selaginella moellendorffii ","protein phosphatase 5.2","protein_coding"
"420767","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"420979","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"422417","No alias","Selaginella moellendorffii ","forkhead-associated (FHA) domain-containing protein","protein_coding"
"422832","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"423378","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"423881","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"423952","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"423971","No alias","Selaginella moellendorffii ","sporulation 11-2","protein_coding"
"425398","No alias","Selaginella moellendorffii ","indigoidine synthase A family protein","protein_coding"
"426333","No alias","Selaginella moellendorffii ","Eukaryotic aspartyl protease family protein","protein_coding"
"428693","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"430460","No alias","Selaginella moellendorffii ","D-arabinono-1,4-lactone oxidase family protein","protein_coding"
"430530","No alias","Selaginella moellendorffii ","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding"
"430570","No alias","Selaginella moellendorffii ","NHL domain-containing protein","protein_coding"
"430930","No alias","Selaginella moellendorffii ","DNA/RNA helicase protein","protein_coding"
"431046","No alias","Selaginella moellendorffii ","Leucine-rich receptor-like protein kinase family protein","protein_coding"
"431393","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"432408","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"437703","No alias","Selaginella moellendorffii ","YebC-related","protein_coding"
"439296","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"439354","No alias","Selaginella moellendorffii ","Peptidase M1 family protein","protein_coding"
"441866","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"442170","No alias","Selaginella moellendorffii ","eukaryotic initiation factor 4A-III","protein_coding"
"446050","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"49652","No alias","Selaginella moellendorffii ","RNApolymerase 14 kDa subunit","protein_coding"
"58739","No alias","Selaginella moellendorffii ","Mitochondrial transcription termination factor family protein","protein_coding"
"62477","No alias","Selaginella moellendorffii ","Pentatricopeptide repeat (PPR-like) superfamily protein","protein_coding"
"67460","No alias","Selaginella moellendorffii ","Protein of unknown function (DUF1223)","protein_coding"
"74606","No alias","Selaginella moellendorffii ","alpha/beta-Hydrolases superfamily protein","protein_coding"
"75543","No alias","Selaginella moellendorffii ","RmlC-like cupins superfamily protein","protein_coding"
"78793","No alias","Selaginella moellendorffii ","Protein kinase family protein","protein_coding"
"8102","No alias","Selaginella moellendorffii ","NADH-dependent glutamate synthase 1","protein_coding"
"8330","No alias","Selaginella moellendorffii ","ataurora3","protein_coding"
"84637","No alias","Selaginella moellendorffii ","Function unknown","protein_coding"
"84735","No alias","Selaginella moellendorffii ","glutaminyl cyclase","protein_coding"
"90598","No alias","Selaginella moellendorffii ","4\'-phosphopantetheinyl transferase superfamily","protein_coding"
"94666","No alias","Selaginella moellendorffii ","annexin 5","protein_coding"
"97410","No alias","Selaginella moellendorffii ","Kinesin motor family protein","protein_coding"
"97898","No alias","Selaginella moellendorffii ","Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein","protein_coding"
"98837","No alias","Selaginella moellendorffii ","lipoyltransferase 2","protein_coding"
"A4A49_16139","No alias","Nicotiana attenuata","hypothetical protein","protein_coding"
"A4A49_20250","No alias","Nicotiana attenuata","hypothetical protein","protein_coding"
"A4A49_25120","No alias","Nicotiana attenuata","hypothetical protein","protein_coding"
"At2g02765","No alias","Arabidopsis thaliana","L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Source:UniProtKB/TrEMBL;Acc:A0A1P8B2C9]","protein_coding"
"At3g11470","No alias","Arabidopsis thaliana","4'-phosphopantetheinyl transferase superfamily [Source:UniProtKB/TrEMBL;Acc:Q8VYK1]","protein_coding"
"Bradi1g10530","No alias","Brachypodium distachyon","Protein kinase superfamily protein","protein_coding"
"Bradi1g10660","No alias","Brachypodium distachyon","CHASE domain containing histidine kinase protein","protein_coding"
"Bradi1g12200","No alias","Brachypodium distachyon","5\'-AMP-activated protein kinase-related","protein_coding"
"Bradi1g12300","No alias","Brachypodium distachyon","magnesium (Mg) transporter 10","protein_coding"
"Bradi1g14690","No alias","Brachypodium distachyon","Primosome PriB/single-strand DNA-binding","protein_coding"
"Bradi1g15270","No alias","Brachypodium distachyon","CBS domain-containing protein / transporter associated domain-containing protein","protein_coding"
"Bradi1g19240","No alias","Brachypodium distachyon","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding"
"Bradi1g25647","No alias","Brachypodium distachyon","cysteine-rich RLK (RECEPTOR-like protein kinase) 10","protein_coding"
"Bradi1g27790","No alias","Brachypodium distachyon","alpha/beta-Hydrolases superfamily protein","protein_coding"
"Bradi1g34525","No alias","Brachypodium distachyon","high chlorophyll fluorescence phenotype 173","protein_coding"
"Bradi1g36420","No alias","Brachypodium distachyon","Sec14p-like phosphatidylinositol transfer family protein","protein_coding"
"Bradi1g37390","No alias","Brachypodium distachyon","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding"
"Bradi1g42770","No alias","Brachypodium distachyon","Glycosyl hydrolase superfamily protein","protein_coding"
"Bradi1g43940","No alias","Brachypodium distachyon","DNAse I-like superfamily protein","protein_coding"
"Bradi1g45833","No alias","Brachypodium distachyon","kinesin like protein for actin based chloroplast movement 1","protein_coding"
"Bradi1g47090","No alias","Brachypodium distachyon","serine carboxypeptidase-like 29","protein_coding"
"Bradi1g49980","No alias","Brachypodium distachyon","basic pentacysteine 6","protein_coding"
"Bradi1g55170","No alias","Brachypodium distachyon","TPX2 (targeting protein for Xklp2) protein family","protein_coding"
"Bradi1g58317","No alias","Brachypodium distachyon","4\'-phosphopantetheinyl transferase superfamily","protein_coding"
"Bradi1g65890","No alias","Brachypodium distachyon","hydrolase family protein / HAD-superfamily protein","protein_coding"
"Bradi1g67780","No alias","Brachypodium distachyon","RING/U-box superfamily protein","protein_coding"
"Bradi1g70390","No alias","Brachypodium distachyon","Caleosin-related family protein","protein_coding"
"Bradi1g75470","No alias","Brachypodium distachyon","transcription activators","protein_coding"
"Bradi1g77867","No alias","Brachypodium distachyon","Stress responsive alpha-beta barrel domain protein","protein_coding"
"Bradi1g78826","No alias","Brachypodium distachyon","ARM repeat superfamily protein","protein_coding"
"Bradi2g01180","No alias","Brachypodium distachyon","Protein kinase superfamily protein","protein_coding"
"Bradi2g12710","No alias","Brachypodium distachyon","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Bradi2g13320","No alias","Brachypodium distachyon","light-mediated development protein 1 / deetiolated1 (DET1)","protein_coding"
"Bradi2g17490","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi2g17926","No alias","Brachypodium distachyon","Trypsin family protein with PDZ domain","protein_coding"
"Bradi2g23920","No alias","Brachypodium distachyon","Syntaxin/t-SNARE family protein","protein_coding"
"Bradi2g25610","No alias","Brachypodium distachyon","transducin family protein / WD-40 repeat family protein","protein_coding"
"Bradi2g26890","No alias","Brachypodium distachyon","Protein kinase superfamily protein","protein_coding"
"Bradi2g30567","No alias","Brachypodium distachyon","Protein kinase superfamily protein","protein_coding"
"Bradi2g33070","No alias","Brachypodium distachyon","atypical CYS  HIS rich thioredoxin 2","protein_coding"
"Bradi2g34020","No alias","Brachypodium distachyon","PRP38 family protein","protein_coding"
"Bradi2g35760","No alias","Brachypodium distachyon","Predicted pyridoxal phosphate-dependent enzyme, YBL036C type","protein_coding"
"Bradi2g36817","No alias","Brachypodium distachyon","F-box/RNI-like superfamily protein","protein_coding"
"Bradi2g37400","No alias","Brachypodium distachyon","Sugar isomerase (SIS) family protein","protein_coding"
"Bradi2g40120","No alias","Brachypodium distachyon","peroxin 14","protein_coding"
"Bradi2g44920","No alias","Brachypodium distachyon","Metal-dependent phosphohydrolase","protein_coding"
"Bradi2g47310","No alias","Brachypodium distachyon","farnesyl diphosphate synthase 1","protein_coding"
"Bradi2g47610","No alias","Brachypodium distachyon","farnesyl diphosphate synthase 1","protein_coding"
"Bradi2g48140","No alias","Brachypodium distachyon","zinc knuckle (CCHC-type) family protein","protein_coding"
"Bradi2g49300","No alias","Brachypodium distachyon","Phosphotyrosine protein phosphatases superfamily protein","protein_coding"
"Bradi2g56810","No alias","Brachypodium distachyon","plant glycogenin-like starch initiation protein 1","protein_coding"
"Bradi2g57952","No alias","Brachypodium distachyon","Protein kinase superfamily protein","protein_coding"
"Bradi2g57960","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi2g60670","No alias","Brachypodium distachyon","phytochromobilin:ferredoxin oxidoreductase, chloroplast / phytochromobilin synthase (HY2)","protein_coding"
"Bradi2g62150","No alias","Brachypodium distachyon","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein","protein_coding"
"Bradi3g04860","No alias","Brachypodium distachyon","Galactosyltransferase family protein","protein_coding"
"Bradi3g06260","No alias","Brachypodium distachyon","Myosin heavy chain-related protein","protein_coding"
"Bradi3g09290","No alias","Brachypodium distachyon","potassium channel in Arabidopsis thaliana 1","protein_coding"
"Bradi3g10350","No alias","Brachypodium distachyon","protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases","protein_coding"
"Bradi3g18840","No alias","Brachypodium distachyon","4\'-phosphopantetheinyl transferase superfamily","protein_coding"
"Bradi3g21317","No alias","Brachypodium distachyon","extra-large GTP-binding protein 3","protein_coding"
"Bradi3g21470","No alias","Brachypodium distachyon","Inositol 1,3,4-trisphosphate 5/6-kinase family protein","protein_coding"
"Bradi3g28580","No alias","Brachypodium distachyon","Beta-glucosidase, GBA2 type family protein","protein_coding"
"Bradi3g33810","No alias","Brachypodium distachyon","camphor resistance CrcB family protein","protein_coding"
"Bradi3g34830","No alias","Brachypodium distachyon","Galactosyltransferase family protein","protein_coding"
"Bradi3g40170","No alias","Brachypodium distachyon","RAB geranylgeranyl transferase beta subunit 1","protein_coding"
"Bradi3g41400","No alias","Brachypodium distachyon","Membrane fusion protein Use1","protein_coding"
"Bradi3g42090","No alias","Brachypodium distachyon","Eukaryotic aspartyl protease family protein","protein_coding"
"Bradi3g52530","No alias","Brachypodium distachyon","Protein kinase superfamily protein","protein_coding"
"Bradi3g52600","No alias","Brachypodium distachyon","Pectinacetylesterase family protein","protein_coding"
"Bradi3g55260","No alias","Brachypodium distachyon","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein","protein_coding"
"Bradi3g57667","No alias","Brachypodium distachyon","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"Bradi3g58040","No alias","Brachypodium distachyon","fucosyltransferase 1","protein_coding"
"Bradi3g58270","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi3g60407","No alias","Brachypodium distachyon","ferrochelatase 1","protein_coding"
"Bradi4g03477","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi4g04870","No alias","Brachypodium distachyon","CTP synthase family protein","protein_coding"
"Bradi4g07267","No alias","Brachypodium distachyon","Class II aminoacyl-tRNA and biotin synthetases superfamily protein","protein_coding"
"Bradi4g08050","No alias","Brachypodium distachyon","zinc finger protein 1","protein_coding"
"Bradi4g11710","No alias","Brachypodium distachyon","glutathione synthetase 2","protein_coding"
"Bradi4g17410","No alias","Brachypodium distachyon","auxin response factor 2","protein_coding"
"Bradi4g20480","No alias","Brachypodium distachyon","DNA glycosylase superfamily protein","protein_coding"
"Bradi4g22180","No alias","Brachypodium distachyon","Protein kinase superfamily protein","protein_coding"
"Bradi4g26330","No alias","Brachypodium distachyon","4\'-phosphopantetheinyl transferase superfamily","protein_coding"
"Bradi4g28460","No alias","Brachypodium distachyon","SU(VAR)3-9 homolog 6","protein_coding"
"Bradi4g28837","No alias","Brachypodium distachyon","porphyromonas-type peptidyl-arginine deiminase family protein","protein_coding"
"Bradi4g29060","No alias","Brachypodium distachyon","Thioredoxin superfamily protein","protein_coding"
"Bradi4g29160","No alias","Brachypodium distachyon","ARM-repeat/Tetratricopeptide repeat (TPR)-like protein","protein_coding"
"Bradi4g37360","No alias","Brachypodium distachyon","nudix hydrolase homolog 23","protein_coding"
"Bradi4g38200","No alias","Brachypodium distachyon","mannosyltransferase family protein","protein_coding"
"Bradi4g39197","No alias","Brachypodium distachyon","solanesyl diphosphate synthase 2","protein_coding"
"Bradi4g41127","No alias","Brachypodium distachyon","sirtuin 2","protein_coding"
"Bradi4g41940","No alias","Brachypodium distachyon","Protein kinase superfamily protein","protein_coding"
"Bradi5g10777","No alias","Brachypodium distachyon","DDT domain-containing protein","protein_coding"
"Bradi5g12442","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi5g14110","No alias","Brachypodium distachyon","ARM repeat superfamily protein","protein_coding"
"Bradi5g15310","No alias","Brachypodium distachyon","Function unknown","protein_coding"
"Bradi5g15710","No alias","Brachypodium distachyon","threonine aldolase 1","protein_coding"
"Bradi5g16400","No alias","Brachypodium distachyon","white-brown complex homolog protein 11","protein_coding"
"Bradi5g19160","No alias","Brachypodium distachyon","Mechanosensitive ion channel protein","protein_coding"
"Bradi5g20012","No alias","Brachypodium distachyon","Plant protein of unknown function (DUF827)","protein_coding"
"Bradi5g24257","No alias","Brachypodium distachyon","cofactor assembly of complex C","protein_coding"
"Bradi5g26047","No alias","Brachypodium distachyon","paralog of ARC6","protein_coding"
"Brara.A01248.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A03255.1","No alias","Brassica rapa","MYB class-R2R3 transcription factor","protein_coding"
"Brara.B01305.1","No alias","Brassica rapa","pectate lyase & EC_4.2 carbon-oxygen lyase","protein_coding"
"Brara.B01635.1","No alias","Brassica rapa","EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding"
"Brara.B03630.1","No alias","Brassica rapa","regulatory component B1 of PP2A phosphatase complexes","protein_coding"
"Brara.B03781.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C00774.1","No alias","Brassica rapa","redox-dependent regulator (BolA4) of iron-sulfur cluster assembly machinery","protein_coding"
"Brara.C00919.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C02916.1","No alias","Brassica rapa","contact site protein (VAP27) of ER-cytoskeleton-plasmamembrane interface","protein_coding"
"Brara.C03055.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C03199.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.D01575.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E00033.1","No alias","Brassica rapa","SMARCC component *(SWI3) of chromatin remodeling complex","protein_coding"
"Brara.E00394.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E02352.1","No alias","Brassica rapa","component *(NDUFB10/PDSW) of NADH dehydrogenase beta subcomplex","protein_coding"
"Brara.E02931.1","No alias","Brassica rapa","phosphopantetheinyl transferase *(mtPPT))","protein_coding"
"Brara.F00287.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F01663.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F03603.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G03268.1","No alias","Brassica rapa","HD-ZIP IV-type transcription factor","protein_coding"
"Brara.H01174.1","No alias","Brassica rapa","methylthioadenosine nucleosidase *(MTN)","protein_coding"
"Brara.H01696.1","No alias","Brassica rapa","BEL-type transcription factor","protein_coding"
"Brara.I02862.1","No alias","Brassica rapa","pterin-4-alpha-carbinolamine dehydratase & EC_4.2 carbon-oxygen lyase","protein_coding"
"Brara.I03253.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I03368.1","No alias","Brassica rapa","substrate adaptor *(AUF) of SCF E3 ubiquitin ligase complex","protein_coding"
"Brara.I04465.1","No alias","Brassica rapa","cyclic nucleotide-gated cation channel *(CNGC)","protein_coding"
"Brara.J02490.1","No alias","Brassica rapa","LRR-VI-2 protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Brara.K00192.1","No alias","Brassica rapa","component *(CPFS5/CFIm25) of Cleavage Factor I (CF-Im) complex","protein_coding"
"Brara.K00294.1","No alias","Brassica rapa","NADPH-dependent thioredoxin reductase *(NTRC)","protein_coding"
"Brara.K00766.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.K01889.1","No alias","Brassica rapa","CKL protein kinase","protein_coding"
"Cre01.g008250","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre01.g010550","No alias","Chlamydomonas reinhardtii","alpha/beta-Hydrolases superfamily protein","protein_coding"
"Cre01.g011750","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre01.g018500","No alias","Chlamydomonas reinhardtii","4\'-phosphopantetheinyl transferase superfamily","protein_coding"
"Cre01.g039850","No alias","Chlamydomonas reinhardtii","Putative lysine decarboxylase family protein","protein_coding"
"Cre01.g055550","No alias","Chlamydomonas reinhardtii","cytochrome c oxidase assembly protein CtaG / Cox11 family","protein_coding"
"Cre02.g075800","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g078200","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g087400","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre02.g108900","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g144564","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g153000","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g181700","No alias","Chlamydomonas reinhardtii","SOS3-interacting protein 4","protein_coding"
"Cre03.g207500","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre03.g208945","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre04.g220387","No alias","Chlamydomonas reinhardtii","cytochrome P450, family 705, subfamily A, polypeptide 22","protein_coding"
"Cre05.g232752","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g249850","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g261300","No alias","Chlamydomonas reinhardtii","Mannose-P-dolichol utilization defect 1 protein","protein_coding"
"Cre06.g263400","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g274050","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g278089","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g278207","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g287300","No alias","Chlamydomonas reinhardtii","ankyrin-like1","protein_coding"
"Cre06.g287350","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre06.g311150","No alias","Chlamydomonas reinhardtii","Major facilitator superfamily protein","protein_coding"
"Cre07.g323750","No alias","Chlamydomonas reinhardtii","4\'-phosphopantetheinyl transferase superfamily","protein_coding"
"Cre07.g335350","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre07.g349900","No alias","Chlamydomonas reinhardtii","acyl-CoA sterol acyl transferase 1","protein_coding"
"Cre07.g355500","No alias","Chlamydomonas reinhardtii","Yippee family putative zinc-binding protein","protein_coding"
"Cre08.g365300","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre08.g366579","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre08.g366700","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre08.g376500","No alias","Chlamydomonas reinhardtii","MUTM homolog-1","protein_coding"
"Cre08.g378800","No alias","Chlamydomonas reinhardtii","GATA transcription factor 27","protein_coding"
"Cre09.g391467","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g395806","No alias","Chlamydomonas reinhardtii","zeaxanthin epoxidase (ZEP) (ABA1)","protein_coding"
"Cre09.g400590","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g400700","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g409300","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre09.g410450","No alias","Chlamydomonas reinhardtii","Homeodomain-like superfamily protein","protein_coding"
"Cre09.g414416","No alias","Chlamydomonas reinhardtii","Cyclin family protein","protein_coding"
"Cre10.g452000","No alias","Chlamydomonas reinhardtii","ChaC-like family protein","protein_coding"
"Cre11.g476400","No alias","Chlamydomonas reinhardtii","DNA glycosylase superfamily protein","protein_coding"
"Cre11.g478025","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre12.g492851","No alias","Chlamydomonas reinhardtii","Glycosyl hydrolase superfamily protein","protein_coding"
"Cre12.g515450","No alias","Chlamydomonas reinhardtii","ubiquitin carrier protein 1","protein_coding"
"Cre13.g585600","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre13.g587600","No alias","Chlamydomonas reinhardtii","starch synthase 3","protein_coding"
"Cre13.g605550","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre14.g610750","No alias","Chlamydomonas reinhardtii","MATE efflux family protein","protein_coding"
"Cre14.g611300","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre14.g617700","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre14.g630787","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre14.g630799","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre14.g632847","No alias","Chlamydomonas reinhardtii","exostosin family protein","protein_coding"
"Cre14.g633904","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre14.g634193","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre15.g643500","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g650950","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g656900","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g666627","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g670151","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre16.g680200","No alias","Chlamydomonas reinhardtii","Auxin efflux carrier family protein","protein_coding"
"Cre16.g684043","No alias","Chlamydomonas reinhardtii","aldehyde dehydrogenase 2B7","protein_coding"
"Cre17.g700600","No alias","Chlamydomonas reinhardtii","BTB/POZ domain-containing protein","protein_coding"
"Cre17.g709900","No alias","Chlamydomonas reinhardtii","Protein kinase superfamily protein","protein_coding"
"Cre17.g712600","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre17.g722650","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre17.g731100","No alias","Chlamydomonas reinhardtii","Uncharacterized conserved protein (DUF2358)","protein_coding"
"Cre17.g742100","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre33.g758997","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"evm.model.contig_2017.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2033.25","No alias","Porphyridium purpureum","(at1g62930 : 110.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G63130.1); Has 70585 Blast hits to 15409 proteins in 318 species: Archae - 8; Bacteria - 85; Metazoa - 1384; Fungi - 1397; Plants - 64906; Viruses - 0; Other Eukaryotes - 2805 (source: NCBI BLink). & (q76c99|rf1_orysa : 93.2) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (gnl|cdd|68872 : 87.4) no description available & (reliability: 216.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2033.31","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2036.4","No alias","Porphyridium purpureum","(at5g13010 : 784.0) embryo defective 3011 (EMB3011); FUNCTIONS IN: RNA helicase activity, helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, putative (TAIR:AT3G26560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1568.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2036.8","No alias","Porphyridium purpureum","(at3g10350 : 227.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: cellular metal ion homeostasis, anion transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, anion-transporting (InterPro:IPR003348); BEST Arabidopsis thaliana protein match is: Anion-transporting ATPase (TAIR:AT5G60730.1). & (reliability: 428.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2044.26","No alias","Porphyridium purpureum",""(at3g47930 : 432.0) L-Galactono-1,4-lactone dehydrogenase, catalyzes the final step of ascorbate biosynthesis; ""L-galactono-1,4-lactone dehydrogenase"" (GLDH); CONTAINS InterPro DOMAIN/s: D-arabinono-1,4-lactone oxidase (InterPro:IPR007173), FAD-binding, type 2 (InterPro:IPR016166), Galactonolactone dehydrogenase (InterPro:IPR010029), Actin-binding FH2 (InterPro:IPR015425), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: D-arabinono-1,4-lactone oxidase family protein (TAIR:AT5G56490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 864.0) &  (original description: no original description)"","protein_coding"
"evm.model.contig_2051.38","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2060.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2068.23","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2077.13","No alias","Porphyridium purpureum","(at2g13370 : 595.0) chromatin remodeling 5 (CHR5); FUNCTIONS IN: chromatin binding, helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: chromatin assembly or disassembly; LOCATED IN: chromatin, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), Homeodomain-like (InterPro:IPR009057), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor CHD3 (PICKLE) (TAIR:AT2G25170.1); Has 38529 Blast hits to 28045 proteins in 2467 species: Archae - 189; Bacteria - 9973; Metazoa - 8887; Fungi - 6205; Plants - 2508; Viruses - 447; Other Eukaryotes - 10320 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 419.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1190.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2081.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2083.2","No alias","Porphyridium purpureum","(at5g01310 : 108.0) Encodes a protein that has adenylylsulfate sulfohydrolase activity (E.C. 3.6.2.1) in vitro.; APRATAXIN-like (APTX); FUNCTIONS IN: adenylylsulfatase activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: sulfur metabolic process, purine ribonucleotide metabolic process, regulation of transcription; LOCATED IN: intracellular, nucleus, chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Appr-1-p processing (InterPro:IPR002589), Histidine triad (HIT) protein (InterPro:IPR001310), Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Histidine triad motif (InterPro:IPR011151), Helix-loop-helix DNA-binding (InterPro:IPR011598), Histidine triad-like motif (InterPro:IPR011146), Histidine triad, conserved site (InterPro:IPR019808); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G21330.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 216.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2083.9","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2084.19","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding"
"evm.model.contig_2094.8","No alias","Porphyridium purpureum","(at4g39910 : 213.0) Encodes a nuclear ubiquitin-specific protease.; ubiquitin-specific protease 3 (UBP3); CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 4 (TAIR:AT2G22310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 426.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2096.17","No alias","Porphyridium purpureum","(at2g42160 : 83.2) BRAP2 RING ZnF UBP domain-containing protein 1 (BRIZ1); FUNCTIONS IN: catalytic activity, zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BRCA1-associated 2 (InterPro:IPR011422), Zinc finger, UBP-type (InterPro:IPR001607), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT2G26000.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 166.4) &  (original description: no original description)","protein_coding"
"evm.model.contig_2096.23","No alias","Porphyridium purpureum","(at2g13440 : 734.0) glucose-inhibited division family A protein; FUNCTIONS IN: FAD binding; INVOLVED IN: tRNA processing, tRNA wobble uridine modification; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glucose-inhibited division protein A-related (InterPro:IPR002218), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Glucose-inhibited division protein A (InterPro:IPR004416), Glucose-inhibited division protein A-related, conserved site (InterPro:IPR020595); Has 12829 Blast hits to 12787 proteins in 2525 species: Archae - 2; Bacteria - 6632; Metazoa - 144; Fungi - 175; Plants - 52; Viruses - 0; Other Eukaryotes - 5824 (source: NCBI BLink). & (reliability: 1468.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2104.9","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding"
"evm.model.contig_2116.7","No alias","Porphyridium purpureum","(at1g71440 : 94.0) Encodes tubulin-folding cofactor E.  Mutant embryos consist of one or a few grossly enlarged cells, surrounded by an endosperm that fails to cellularize and contains a few big nuclei.; PFIFFERLING (PFI); INVOLVED IN: tubulin complex assembly, embryo development ending in seed dormancy, cytokinesis; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytoskeleton-associated protein, CAP-Gly (InterPro:IPR000938); Has 7270 Blast hits to 6366 proteins in 489 species: Archae - 4; Bacteria - 1949; Metazoa - 3435; Fungi - 492; Plants - 819; Viruses - 0; Other Eukaryotes - 571 (source: NCBI BLink). & (reliability: 188.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2118.10","No alias","Porphyridium purpureum","(at1g08540 : 233.0) Enodes a subunit of chloroplast RNA polymerase, confers the ability to recognize promoter sequences on the core enzyme. SIG1 is induced by red and blue light.; RNApolymerase sigma subunit 2 (SIG2); CONTAINS InterPro DOMAIN/s: RNA polymerase sigma factor, region 2 (InterPro:IPR013325), Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA polymerase sigma-70 region 3 (InterPro:IPR007624), RNA polymerase sigma-70 (InterPro:IPR014284), RNA polymerase sigma factor, region 3/4 (InterPro:IPR013324), RNA polymerase sigma-70 region 1.2 (InterPro:IPR009042), RNA polymerase sigma-70 factor (InterPro:IPR000943), RNA polymerase sigma factor, SigB/SigC/SigD, plastid (InterPro:IPR016262), RNA polymerase sigma-70 region 2 (InterPro:IPR007627), RNA polymerase sigma-70 region 4 (InterPro:IPR007630); BEST Arabidopsis thaliana protein match is: RNApolymerase sigma-subunit F (TAIR:AT2G36990.1); Has 24116 Blast hits to 24030 proteins in 2811 species: Archae - 0; Bacteria - 17119; Metazoa - 4; Fungi - 2; Plants - 243; Viruses - 12; Other Eukaryotes - 6736 (source: NCBI BLink). & (reliability: 466.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2157.13","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2186.9","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2190.11","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2194.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2208.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2281.16","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2282.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2284.16","No alias","Porphyridium purpureum","(at1g59760 : 812.0) RNA helicase, ATP-dependent, SK12/DOB1 protein; FUNCTIONS IN: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DSH, C-terminal (InterPro:IPR012961), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), RNA helicase, ATP-dependent, SK12/DOB1 (InterPro:IPR016438), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase, ATP-dependent, SK12/DOB1 protein (TAIR:AT2G06990.1); Has 9909 Blast hits to 8438 proteins in 1290 species: Archae - 828; Bacteria - 3072; Metazoa - 1170; Fungi - 1231; Plants - 476; Viruses - 32; Other Eukaryotes - 3100 (source: NCBI BLink). & (reliability: 1624.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2284.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2329.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2339.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2357.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2494.33","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2494.36","No alias","Porphyridium purpureum","(at5g06680 : 153.0) Encodes protein similar to yeast SCP98. Yeast SCP98 is essential for the microtubule nucleation activity of the gamma-tubulin ring complexes.; spindle pole body component 98 (SPC98); CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259), Gamma tubulin complex protein 3 (InterPro:IPR015697); BEST Arabidopsis thaliana protein match is: Spc97 / Spc98 family of spindle pole body (SBP) component (TAIR:AT5G17410.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 306.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2502.13","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2502.14","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_2715.1","No alias","Porphyridium purpureum","(at5g55580 : 114.0) Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT1G78930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 228.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3395.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3412.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3415.6","No alias","Porphyridium purpureum","(at1g80930 : 286.0) MIF4G domain-containing protein / MA3 domain-containing protein; FUNCTIONS IN: RNA binding, binding; INVOLVED IN: translation, RNA metabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891), Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890), MIF4-like, type 1/2/3 (InterPro:IPR016021); BEST Arabidopsis thaliana protein match is: Initiation factor eIF-4 gamma, MA3 (TAIR:AT1G52325.1); Has 51676 Blast hits to 28577 proteins in 1484 species: Archae - 86; Bacteria - 5039; Metazoa - 22313; Fungi - 6500; Plants - 3817; Viruses - 357; Other Eukaryotes - 13564 (source: NCBI BLink). & (reliability: 572.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3432.5","No alias","Porphyridium purpureum","(at5g05740 : 81.3) S2P-like putative metalloprotease, also contain transmembrane helices near their C-termini and many of them, five of seven, contain a conserved zinc-binding motif HEXXH. Homolog of EGY1. Each of the EGY1 and EGY-like proteins share two additional highly conserved motifs, the previously reported NPDG motif (aa 442ñ454 in EGY1, Rudner et al., 1999) and a newly defined GNLR motif (aa 171ñ179 in EGY1). The GNLR motif is a novel signature motif unique to EGY1 and EGY-like proteins as well as other EGY1 orthologs found in cyanobacteria.; ethylene-dependent gravitropism-deficient and yellow-green-like 2 (EGY2); FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M50 (InterPro:IPR008915); BEST Arabidopsis thaliana protein match is: Peptidase M50 family protein (TAIR:AT5G35220.1). & (reliability: 162.6) &  (original description: no original description)","protein_coding"
"evm.model.contig_3436.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3448.10","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3450.11","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3450.15","No alias","Porphyridium purpureum","(at1g66730 : 353.0) Encodes a novel plant specific DNA ligase that is involved in seed germination and DNA repair.; DNA LIGASE 6 (LIG6); FUNCTIONS IN: DNA binding, DNA ligase (ATP) activity, ATP binding; INVOLVED IN: DNA repair, seed germination, DNA recombination, DNA replication; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA ligase, N-terminal (InterPro:IPR012308), DNA repair metallo-beta-lactamase (InterPro:IPR011084), ATP dependent DNA ligase, central (InterPro:IPR012310), ATP dependent DNA ligase, C-terminal (InterPro:IPR012309), ATP-dependent DNA ligase (InterPro:IPR000977), ATP-dependent DNA ligase, conserved site (InterPro:IPR016059); BEST Arabidopsis thaliana protein match is: DNA ligase 1 (TAIR:AT1G08130.1); Has 4468 Blast hits to 4373 proteins in 907 species: Archae - 366; Bacteria - 1648; Metazoa - 644; Fungi - 681; Plants - 268; Viruses - 157; Other Eukaryotes - 704 (source: NCBI BLink). & (q7x7e9|dnl4_orysa : 90.5) Putative DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4) - Oryza sativa (Rice) & (reliability: 706.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3490.10","No alias","Porphyridium purpureum","(at5g64380 : 306.0) Inositol monophosphatase family protein; FUNCTIONS IN: phosphoric ester hydrolase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fructose-1,6-bisphosphatase (InterPro:IPR000146); BEST Arabidopsis thaliana protein match is: high cyclic electron flow 1 (TAIR:AT3G54050.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p46275|f16p1_pea : 248.0) Fructose-1,6-bisphosphatase, chloroplast precursor (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase) (FBPase) - Pisum sativum (Garden pea) & (reliability: 612.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3523.4","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding"
"evm.model.contig_3545.2","No alias","Porphyridium purpureum","(at4g36650 : 89.7) Encodes a protein with similarity to the general transcription factor TFIIB. pBRP binds rDNA sequences in vitro. pBRP has been localized to the outer face of the plastid membrane with GFP fusion however, under conditions of proteosome inhibition it is found in the nucleus.; plant-specific TFIIB-related protein (PBRP); FUNCTIONS IN: RNA polymerase II transcription factor activity, rDNA binding; INVOLVED IN: translational initiation, regulation of transcription, DNA-dependent, transcription initiation; LOCATED IN: plastid outer membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related (InterPro:IPR000812), Transcription factor TFIIB, cyclin-related (InterPro:IPR013150), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: transcription factor IIB (TAIR:AT2G41630.1); Has 1297 Blast hits to 1296 proteins in 319 species: Archae - 504; Bacteria - 1; Metazoa - 214; Fungi - 180; Plants - 140; Viruses - 3; Other Eukaryotes - 255 (source: NCBI BLink). & (reliability: 179.4) &  (original description: no original description)","protein_coding"
"evm.model.contig_3550.2","No alias","Porphyridium purpureum"," (original description: no original description)","protein_coding"
"evm.model.contig_3576.1","No alias","Porphyridium purpureum","(at5g55310 : 481.0) Encodes one of two Arabidopsis type-I DNA topoisomerase I genes.  Reducing the level of expression of this gene in a top1alpha (At5g55300) mutant background causes seedling lethality.; DNA topoisomerase 1 beta (TOP1BETA); FUNCTIONS IN: DNA topoisomerase type I activity; INVOLVED IN: DNA topological change; LOCATED IN: membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA topoisomerase I, DNA binding, mixed alpha/beta motif, eukaryotic-type (InterPro:IPR013030), DNA topoisomerase I, DNA binding, eukaryotic-type (InterPro:IPR008336), DNA topoisomerase I, C-terminal (InterPro:IPR001631), DNA topoisomerase I, active site (InterPro:IPR018521), DNA topoisomerase I, catalytic core, alpha/beta subdomain, eukaryotic-type (InterPro:IPR014727), DNA topoisomerase I, catalytic core, eukaryotic-type (InterPro:IPR013500), DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-type (InterPro:IPR014711), DNA topoisomerase I, C-terminal, eukaryotic-type (InterPro:IPR013499), DNA breaking-rejoining enzyme, catalytic core (InterPro:IPR011010); BEST Arabidopsis thaliana protein match is: DNA topoisomerase I alpha (TAIR:AT5G55300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p93119|top1_dauca : 401.0) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I) - Daucus carota (Carrot) & (reliability: 962.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3585.1","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3601.9","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3606.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3618.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4405.12","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4417.4","No alias","Porphyridium purpureum","(at1g18260 : 89.0) HCP-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Sel1-like (InterPro:IPR006597); BEST Arabidopsis thaliana protein match is: HCP-like superfamily protein (TAIR:AT1G73570.1); Has 24350 Blast hits to 8436 proteins in 1359 species: Archae - 0; Bacteria - 17163; Metazoa - 848; Fungi - 960; Plants - 547; Viruses - 27; Other Eukaryotes - 4805 (source: NCBI BLink). & (reliability: 178.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4418.11","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4418.12","No alias","Porphyridium purpureum","(at1g77680 : 359.0) Ribonuclease II/R family protein; FUNCTIONS IN: ribonuclease activity, RNA binding; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease II/R (InterPro:IPR001900); BEST Arabidopsis thaliana protein match is: ribonuclease II family protein (TAIR:AT2G17510.1); Has 8235 Blast hits to 8065 proteins in 2328 species: Archae - 43; Bacteria - 5411; Metazoa - 476; Fungi - 391; Plants - 139; Viruses - 2; Other Eukaryotes - 1773 (source: NCBI BLink). & (reliability: 718.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4419.4","No alias","Porphyridium purpureum","(at4g21540 : 120.0) Encodes a sphingosine kinase, also has enzyme activity towards other plant long-chain sphingoid bases. Involved in guard cell ABA signalling and seed germination.; sphingosine kinase 1 (SPHK1); FUNCTIONS IN: diacylglycerol kinase activity, sphinganine kinase activity, D-erythro-sphingosine kinase activity; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway, seed germination, response to abscisic acid stimulus; LOCATED IN: plant-type vacuole membrane, vacuole; CONTAINS InterPro DOMAIN/s: Diacylglycerol kinase, catalytic domain (InterPro:IPR001206); BEST Arabidopsis thaliana protein match is: Diacylglycerol kinase family protein (TAIR:AT4G21534.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 222.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4424.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4428.8","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_443.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_443.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_443.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4456.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4458.7","No alias","Porphyridium purpureum","(at1g55460 : 126.0) DNA/RNA-binding protein Kin17, conserved region; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), DNA/RNA-binding protein Kin17, conserved region (InterPro:IPR019447), KOW (InterPro:IPR005824); BEST Arabidopsis thaliana protein match is: DNA/RNA-binding protein Kin17, conserved region (TAIR:AT5G51795.1); Has 1885 Blast hits to 1561 proteins in 251 species: Archae - 4; Bacteria - 25; Metazoa - 715; Fungi - 242; Plants - 160; Viruses - 13; Other Eukaryotes - 726 (source: NCBI BLink). & (reliability: 252.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4515.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_4527.2","No alias","Porphyridium purpureum","(at2g16920 : 150.0) ubiquitin-conjugating enzyme 23 (UBC23); FUNCTIONS IN: ubiquitin-protein ligase activity, small conjugating protein ligase activity; INVOLVED IN: regulation of protein metabolic process, post-translational protein modification; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: phosphate 2 (TAIR:AT2G33770.1); Has 13499 Blast hits to 9775 proteins in 506 species: Archae - 15; Bacteria - 1590; Metazoa - 4947; Fungi - 2194; Plants - 1786; Viruses - 166; Other Eukaryotes - 2801 (source: NCBI BLink). & (reliability: 300.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_462.5","No alias","Porphyridium purpureum","(at2g22870 : 95.5) embryo defective 2001 (EMB2001); FUNCTIONS IN: GTP binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP-binding protein, HSR1-related (InterPro:IPR002917), GTP-binding protein, ribosome biogenesis,  YsxC (InterPro:IPR019987); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G11480.1); Has 7972 Blast hits to 7922 proteins in 2512 species: Archae - 103; Bacteria - 5806; Metazoa - 98; Fungi - 230; Plants - 215; Viruses - 0; Other Eukaryotes - 1520 (source: NCBI BLink). & (reliability: 191.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_469.9","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_479.8","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_493.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_494.8","No alias","Porphyridium purpureum","(at3g50530 : 112.0) CDPK-related kinase; CDPK-related kinase (CRK); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: CDPK-related kinase 1 (TAIR:AT2G41140.1). & (reliability: 224.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_498.10","No alias","Porphyridium purpureum","(at5g26240 : 84.0) member of Anion channel protein family; chloride channel D (CLC-D); CONTAINS InterPro DOMAIN/s: Chloride channel, core (InterPro:IPR014743), Chloride channel, voltage gated (InterPro:IPR001807), Chloride channel ClC-plant (InterPro:IPR002251), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: chloride channel C (TAIR:AT5G49890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 168.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_503.9","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_505.3","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_525.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_538.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_544.8","No alias","Porphyridium purpureum","(at4g32060 : 106.0) calcium-binding EF hand family protein; FUNCTIONS IN: calcium ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); Has 1096 Blast hits to 1078 proteins in 164 species: Archae - 0; Bacteria - 0; Metazoa - 829; Fungi - 82; Plants - 97; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink). & (reliability: 212.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_594.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_693.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000017.6","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000025.44","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000025.45","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000025.47","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000025.48","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000025.6","No alias","Cyanophora paradoxa","(at2g17700 : 133.0) ACT-like protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation, metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Amino acid-binding ACT (InterPro:IPR002912), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine protein kinase-like, ATMRK (InterPro:IPR015783), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: ACT-like protein tyrosine kinase family protein (TAIR:AT4G35780.1); Has 131925 Blast hits to 129768 proteins in 5057 species: Archae - 139; Bacteria - 14109; Metazoa - 50800; Fungi - 11992; Plants - 33819; Viruses - 503; Other Eukaryotes - 20563 (source: NCBI BLink). & (reliability: 266.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000042.116","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000057.66","No alias","Cyanophora paradoxa","(at3g47730 : 380.0) member of ATH subfamily; ATP-binding cassette A2 (ABCA2); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: response to cyclopentenone; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC2 homolog 11 (TAIR:AT5G61730.1); Has 380556 Blast hits to 352092 proteins in 4023 species: Archae - 7135; Bacteria - 302205; Metazoa - 7915; Fungi - 4655; Plants - 4588; Viruses - 7; Other Eukaryotes - 54051 (source: NCBI BLink). & (reliability: 760.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000058.10","No alias","Cyanophora paradoxa","(at5g63890 : 219.0) Encodes histidinol dehydrogenase. Up-regulated in response to UV-B.; histidinol dehydrogenase (HDH); FUNCTIONS IN: histidinol dehydrogenase activity; INVOLVED IN: response to UV, pollen development; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Histidinol dehydrogenase, conserved site (InterPro:IPR001692), Histidinol dehydrogenase, prokaryotic-type (InterPro:IPR012131); Has 9146 Blast hits to 9146 proteins in 2211 species: Archae - 179; Bacteria - 4194; Metazoa - 4; Fungi - 211; Plants - 72; Viruses - 0; Other Eukaryotes - 4486 (source: NCBI BLink). & (q5nay4|hisx_orysa : 217.0) Histidinol dehydrogenase, chloroplast precursor (EC 1.1.1.23) (HDH) - Oryza sativa (Rice) & (reliability: 438.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000093.235","No alias","Cyanophora paradoxa","(at1g27320 : 96.3) Encodes a histidine kinases, a cytokinin receptor that controls cytokinin-mediated leaf longevity through a specific phosphorylation of the response regulator, ARR2.; histidine kinase 3 (HK3); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 2 (TAIR:AT5G35750.1); Has 124308 Blast hits to 110912 proteins in 3043 species: Archae - 772; Bacteria - 110408; Metazoa - 31; Fungi - 2185; Plants - 2022; Viruses - 28; Other Eukaryotes - 8862 (source: NCBI BLink). & (q9m7m1|etr1_prupe : 80.1) Ethylene receptor (EC 2.7.13.3) - Prunus persica (Peach) & (reliability: 192.6) &  (original description: no original description)","protein_coding"
"evm.model.tig00000093.236","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000093.237","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000093.238","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000093.69","No alias","Cyanophora paradoxa","(at2g45270 : 139.0) Mitochondrial protein essential for embryo development.; glycoprotease 1 (GCP1); FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: proteolysis, embryo development; LOCATED IN: mitochondrial inner membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M22, O-sialoglycoprotein peptidase (InterPro:IPR022450), Peptidase M22, glycoprotease (InterPro:IPR000905), Peptidase M22, glycoprotease, subgroup (InterPro:IPR017861); BEST Arabidopsis thaliana protein match is: Actin-like ATPase superfamily protein (TAIR:AT4G22720.2); Has 11122 Blast hits to 11085 proteins in 2922 species: Archae - 268; Bacteria - 6121; Metazoa - 269; Fungi - 294; Plants - 213; Viruses - 0; Other Eukaryotes - 3957 (source: NCBI BLink). & (reliability: 278.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000113.124","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000113.125","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000113.49","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000113.50","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000113.51","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000113.90","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000113.93","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000137.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000140.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000144.102","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000144.124","No alias","Cyanophora paradoxa","(p34811|efgc_soybn : 155.0) Elongation factor G, chloroplast precursor (EF-G) - Glycine max (Soybean) & (at1g62750 : 154.0) Nuclear encoded protein consists of the five domains conserved in EF-G proteins, with two GTP-binding sites in the first domain, and an additional transit peptide at the N-terminus. Localized in chloroplasts. Point mutation results in a delay in the onset of germination. At early developmental stage embryos still contain undifferentiated proplastids. The greening of cotyledons is severely impaired in light-grown mutant sco1 seedlings, whereas the following true leaves develop normally as in wild-type plants.; SNOWY COTYLEDON 1 (SCO1); FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, translation elongation factor activity, ATP binding; INVOLVED IN: post-embryonic development, chloroplast organization, seed germination; LOCATED IN: mitochondrion, apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation factor EFG/EF2, domain IV (InterPro:IPR005517), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFG/EF2 (InterPro:IPR004540), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EFG/EF2 protein (TAIR:AT2G45030.1); Has 79823 Blast hits to 67706 proteins in 7071 species: Archae - 929; Bacteria - 47320; Metazoa - 4453; Fungi - 5428; Plants - 1613; Viruses - 3; Other Eukaryotes - 20077 (source: NCBI BLink). & (reliability: 308.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000144.156","No alias","Cyanophora paradoxa","(at3g04600 : 374.0) Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotide binding, tryptophan-tRNA ligase activity, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, tryptophanyl-tRNA aminoacylation; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Tryptophanyl-tRNA synthetase, class Ib (InterPro:IPR002306), Aminoacyl-tRNA synthetase, class Ib (InterPro:IPR002305); Has 2274 Blast hits to 2202 proteins in 759 species: Archae - 483; Bacteria - 800; Metazoa - 304; Fungi - 267; Plants - 65; Viruses - 5; Other Eukaryotes - 350 (source: NCBI BLink). & (reliability: 748.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000144.38","No alias","Cyanophora paradoxa","(at5g52920 : 432.0) encodes a dominant chloroplast pyruvate kinase beta subunit. Important for seed oil biosynthesis. Ubiquitously expressed, with significantly increased expression in maturing seeds. The mutant plant has wrinkled seeds, with a 50-70% reduction in seed fatty acid content.; plastidic pyruvate kinase beta subunit 1 (PKP-BETA1); FUNCTIONS IN: pyruvate kinase activity; INVOLVED IN: response to cadmium ion, glycolysis, seed development, fatty acid biosynthetic process, lipid metabolic process; LOCATED IN: mitochondrion, chloroplast, chloroplast stroma; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: plastidial pyruvate kinase 3 (TAIR:AT1G32440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q43117|kpya_ricco : 427.0) Pyruvate kinase isozyme A, chloroplast precursor (EC 2.7.1.40) - Ricinus communis (Castor bean) & (reliability: 864.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000144.53","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000145.25","No alias","Cyanophora paradoxa","(at1g66340 : 80.9) Similar to prokaryote sensory transduction proteins. Contains a histidine kinase and a response regulator domain. Homodimer. Membrane component. Binds ethylene. Mutations affect ethylene binding and metabolism of other plant hormones such as auxin, cytokinins, ABA and gibberellic acid. Ethylene receptor. Has histidine kinase activity. Is regulated by RTE1.; ETHYLENE RESPONSE 1 (ETR1); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), Signal transduction histidine kinase, core (InterPro:IPR005467), Signal transduction histidine kinase, hybrid-type, ethylene sensor (InterPro:IPR014525), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), GAF (InterPro:IPR003018), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: ethylene response sensor 1 (TAIR:AT2G40940.1); Has 102721 Blast hits to 98263 proteins in 3046 species: Archae - 757; Bacteria - 90102; Metazoa - 18; Fungi - 1611; Plants - 2314; Viruses - 21; Other Eukaryotes - 7898 (source: NCBI BLink). & (reliability: 161.8) &  (original description: no original description)","protein_coding"
"evm.model.tig00000147.24","No alias","Cyanophora paradoxa","(at1g15500 : 427.0) ATNTT2; FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, chloroplast envelope, cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: nucleotide transporter 1 (TAIR:AT1G80300.1); Has 767 Blast hits to 762 proteins in 173 species: Archae - 0; Bacteria - 466; Metazoa - 8; Fungi - 28; Plants - 101; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink). & (o24381|tlc1_soltu : 424.0) Plastidic ATP/ADP-transporter - Solanum tuberosum (Potato) & (reliability: 854.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000157.126","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000157.33","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000178.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000178.36","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000203.28","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000215.23","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000237.23","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000241.10","No alias","Cyanophora paradoxa","(at3g53570 : 348.0) a  member of a CDC2-related kinase subfamily,  the LAMMER kinases. activates STE12-dependent functions in yeast.; FUS3-complementing gene 1 (FC1); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: FUS3-complementing gene 2 (TAIR:AT4G24740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p29620|kc47_orysa : 92.4) CDC2+/CDC28-related protein kinase R2 (EC 2.7.11.22) - Oryza sativa (Rice) & (reliability: 696.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000246.25","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000248.35","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000254.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000254.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000254.79","No alias","Cyanophora paradoxa","(at1g17840 : 339.0) Encodes a plasma membrane-localized ATP-binding cassette transporter, that is required for cutin  transport to the extracellular matrix.; white-brown complex homolog protein 11 (WBC11); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, fatty acid transporter activity; INVOLVED IN: cutin transport, fatty acid transport; LOCATED IN: plasma membrane, external side of plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G21090.1); Has 367567 Blast hits to 338203 proteins in 4071 species: Archae - 6733; Bacteria - 294034; Metazoa - 7509; Fungi - 6244; Plants - 5251; Viruses - 10; Other Eukaryotes - 47786 (source: NCBI BLink). & (q7fmw4|pdr15_orysa : 211.0) Pleiotropic drug resistance protein 15 - Oryza sativa (Rice) & (reliability: 678.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000254.93","No alias","Cyanophora paradoxa","(at4g31600 : 139.0) UDP-N-acetylglucosamine (UAA) transporter family; INVOLVED IN: transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UAA transporter (InterPro:IPR013657); BEST Arabidopsis thaliana protein match is: Nucleotide/sugar transporter family protein (TAIR:AT4G32272.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 278.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000269.102","No alias","Cyanophora paradoxa","(at5g64840 : 302.0) member of GCN subfamily; general control non-repressible 5 (GCN5); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC transporter family protein (TAIR:AT5G09930.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 604.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000293.20","No alias","Cyanophora paradoxa","(at4g37980 : 240.0) elicitor-activated gene 3-1 (ELI3-1); FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: response to bacterium, plant-type hypersensitive response; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: elicitor-activated gene 3-2 (TAIR:AT4G37990.1); Has 38486 Blast hits to 38464 proteins in 3055 species: Archae - 808; Bacteria - 25722; Metazoa - 1237; Fungi - 2883; Plants - 3069; Viruses - 3; Other Eukaryotes - 4764 (source: NCBI BLink). & (q9zrf1|mtdh_fraan : 234.0) Probable mannitol dehydrogenase (EC 1.1.1.255) (NAD-dependent mannitol dehydrogenase) - Fragaria ananassa (Strawberry) & (reliability: 480.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000325.13","No alias","Cyanophora paradoxa","(q9m7m1|etr1_prupe : 163.0) Ethylene receptor (EC 2.7.13.3) - Prunus persica (Peach) & (at1g66340 : 161.0) Similar to prokaryote sensory transduction proteins. Contains a histidine kinase and a response regulator domain. Homodimer. Membrane component. Binds ethylene. Mutations affect ethylene binding and metabolism of other plant hormones such as auxin, cytokinins, ABA and gibberellic acid. Ethylene receptor. Has histidine kinase activity. Is regulated by RTE1.; ETHYLENE RESPONSE 1 (ETR1); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), Signal transduction histidine kinase, core (InterPro:IPR005467), Signal transduction histidine kinase, hybrid-type, ethylene sensor (InterPro:IPR014525), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), GAF (InterPro:IPR003018), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: ethylene response sensor 1 (TAIR:AT2G40940.1); Has 102721 Blast hits to 98263 proteins in 3046 species: Archae - 757; Bacteria - 90102; Metazoa - 18; Fungi - 1611; Plants - 2314; Viruses - 21; Other Eukaryotes - 7898 (source: NCBI BLink). & (reliability: 294.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000325.9","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000334.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000339.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000350.17","No alias","Cyanophora paradoxa","(at1g36180 : 1013.0) acetyl-CoA carboxylase 2 (ACC2); acetyl-CoA carboxylase 2 (ACC2); FUNCTIONS IN: acetyl-CoA carboxylase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Carbamoyl phosphate synthase, large subunit, N-terminal (InterPro:IPR005481), Carbamoyl phosphate synthetase, large subunit, ATP-binding (InterPro:IPR005479), ATP-grasp fold, subdomain 1 (InterPro:IPR013815), PreATP-grasp-like fold (InterPro:IPR016185), Biotin carboxylation domain (InterPro:IPR011764), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Pre-ATP-grasp fold (InterPro:IPR013817); BEST Arabidopsis thaliana protein match is: acetyl-CoA carboxylase 1 (TAIR:AT1G36160.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 2026.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000350.8","No alias","Cyanophora paradoxa","(p49364|gcst_pea : 394.0) Aminomethyltransferase, mitochondrial precursor (EC 2.1.2.10) (Glycine cleavage system T protein) (GCVT) - Pisum sativum (Garden pea) & (at1g11860 : 382.0) Glycine cleavage T-protein family; FUNCTIONS IN: aminomethyltransferase activity; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glycine cleavage system T protein (InterPro:IPR006223), Glycine cleavage T-protein, N-terminal (InterPro:IPR006222), Glycine cleavage T-protein, C-terminal barrel (InterPro:IPR013977); BEST Arabidopsis thaliana protein match is: Glycine cleavage T-protein family (TAIR:AT1G60990.3). & (reliability: 764.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000383.102","No alias","Cyanophora paradoxa","(at5g04870 : 122.0) A calcium-dependent protein kinase that can phosphorylate phenylalanine ammonia lyase (PAL), a key enzyme in pathogen defense.; calcium dependent protein kinase 1 (CPK1); FUNCTIONS IN: protein binding, calmodulin-dependent protein kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: peroxisome, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calmodulin-domain protein kinase cdpk isoform 2 (TAIR:AT3G10660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p53684|cdpk3_orysa : 117.0) Calcium-dependent protein kinase, isoform 11 (EC 2.7.11.1) (CDPK 11) - Oryza sativa (Rice) & (reliability: 244.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000383.31","No alias","Cyanophora paradoxa","(at5g19760 : 227.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: oxidative phosphorylation uncoupler activity, binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: in 6 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: dicarboxylate carrier 2 (TAIR:AT4G24570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 454.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000388.47","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000396.43","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000402.76","No alias","Cyanophora paradoxa","(at5g35750 : 124.0) Encodes histidine kinase AHK2.; histidine kinase 2 (HK2); FUNCTIONS IN: osmosensor activity, cytokinin receptor activity, protein histidine kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 3 (TAIR:AT1G27320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q9m7m1|etr1_prupe : 122.0) Ethylene receptor (EC 2.7.13.3) - Prunus persica (Peach) & (reliability: 248.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000403.56","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000404.20","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000430.47","No alias","Cyanophora paradoxa","(q6zix2|smt1_orysa : 142.0) Cycloartenol-C-24-methyltransferase 1 (EC 2.1.1.41) (24-sterol C-methyltransferase 1) (Sterol C-methyltransferase 1) - Oryza sativa (Rice) & (at5g13710 : 138.0) SMT1 controls the level of cholesterol in plants; sterol methyltransferase 1 (SMT1); CONTAINS InterPro DOMAIN/s: Sterol methyltransferase C-terminal (InterPro:IPR013705), Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: sterol methyltransferase 3 (TAIR:AT1G76090.1); Has 12253 Blast hits to 12250 proteins in 2286 species: Archae - 352; Bacteria - 8578; Metazoa - 91; Fungi - 457; Plants - 727; Viruses - 0; Other Eukaryotes - 2048 (source: NCBI BLink). & (reliability: 276.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000448.20","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000471.15","No alias","Cyanophora paradoxa","(at1g63050 : 163.0) MBOAT (membrane bound O-acyl transferase) family protein; FUNCTIONS IN: acyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Membrane bound O-acyl transferase, MBOAT (InterPro:IPR004299); BEST Arabidopsis thaliana protein match is: MBOAT (membrane bound O-acyl transferase) family protein (TAIR:AT1G12640.1); Has 1074 Blast hits to 1071 proteins in 250 species: Archae - 0; Bacteria - 147; Metazoa - 624; Fungi - 142; Plants - 47; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). & (reliability: 326.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000480.51","No alias","Cyanophora paradoxa","(at5g17660 : 112.0) tRNA (guanine-N-7) methyltransferase; FUNCTIONS IN: tRNA (guanine-N7-)-methyltransferase activity; INVOLVED IN: tRNA modification; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA (guanine-N-7) methyltransferase (InterPro:IPR003358); BEST Arabidopsis thaliana protein match is: tRNA (guanine-N-7) methyltransferase (TAIR:AT5G24840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 224.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000492.75","No alias","Cyanophora paradoxa","(at2g32850 : 212.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: serine/threonine protein kinase 3 (TAIR:AT5G08160.1); Has 91647 Blast hits to 90290 proteins in 2701 species: Archae - 81; Bacteria - 10784; Metazoa - 33910; Fungi - 10357; Plants - 19846; Viruses - 210; Other Eukaryotes - 16459 (source: NCBI BLink). & (reliability: 424.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000498.74","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000523.28","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000553.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000553.27","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000553.5","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000571.22","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000581.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000601.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000615.72","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000615.8","No alias","Cyanophora paradoxa","(p28734|aatc_dauca : 404.0) Aspartate aminotransferase, cytoplasmic (EC 2.6.1.1) (Transaminase A) - Daucus carota (Carrot) & (at5g11520 : 397.0) Encodes the chloroplastic isozyme of aspartate aminotransferase.  Involved in aspartate biosynthesis and nitrogen metabolism. mRNA is expressed in senescing leaves.; aspartate aminotransferase 3 (ASP3); FUNCTIONS IN: L-aspartate:2-oxoglutarate aminotransferase activity; INVOLVED IN: leaf senescence, nitrogen compound metabolic process; LOCATED IN: peroxisome, plastid, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Aspartate/other aminotransferase (InterPro:IPR000796), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: aspartate aminotransferase 2 (TAIR:AT5G19550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 794.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000615.80","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000615.81","No alias","Cyanophora paradoxa","(at3g02470 : 189.0) Encodes a S-adenosylmethionine decarboxylase involved in polyamine biosynthesis.; S-adenosylmethionine decarboxylase; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine decarboxylase, core (InterPro:IPR016067), S-adenosylmethionine decarboxylase (InterPro:IPR001985), S-adenosylmethionine decarboxylase, conserved site (InterPro:IPR018166), S-adenosylmethionine decarboxylase subgroup (InterPro:IPR018167); BEST Arabidopsis thaliana protein match is: Adenosylmethionine decarboxylase family protein (TAIR:AT5G15950.2); Has 1026 Blast hits to 1010 proteins in 271 species: Archae - 0; Bacteria - 57; Metazoa - 220; Fungi - 150; Plants - 531; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink). & (q96471|dcam_iponi : 189.0) S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50) (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain] - Ipomoea nil (Japanese morning glory) (Pharbitis ni & (reliability: 378.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000654.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000655.37","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000691.28","No alias","Cyanophora paradoxa","(at4g17550 : 80.9) Major facilitator superfamily protein; FUNCTIONS IN: sugar:hydrogen symporter activity; INVOLVED IN: carbohydrate transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: phosphate starvation-induced gene 3 (TAIR:AT3G47420.1); Has 16541 Blast hits to 16470 proteins in 1914 species: Archae - 148; Bacteria - 14105; Metazoa - 649; Fungi - 878; Plants - 215; Viruses - 0; Other Eukaryotes - 546 (source: NCBI BLink). & (reliability: 161.8) &  (original description: no original description)","protein_coding"
"evm.model.tig00000711.19","No alias","Cyanophora paradoxa","(at3g06950 : 130.0) Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase I, TruA, N-terminal (InterPro:IPR020094), Pseudouridine synthase I, TruA, alpha/beta domain (InterPro:IPR020097), Pseudouridine synthase I, TruA, C-terminal (InterPro:IPR020095), Pseudouridine synthase I, TruA (InterPro:IPR001406); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT1G34150.1); Has 9137 Blast hits to 9127 proteins in 2768 species: Archae - 169; Bacteria - 5633; Metazoa - 320; Fungi - 238; Plants - 169; Viruses - 0; Other Eukaryotes - 2608 (source: NCBI BLink). & (reliability: 260.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000718.24","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000737.34","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000737.35","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000737.36","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000743.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000743.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000789.12","No alias","Cyanophora paradoxa","(at2g01320 : 187.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 374.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000792.71","No alias","Cyanophora paradoxa","(at1g27320 : 140.0) Encodes a histidine kinases, a cytokinin receptor that controls cytokinin-mediated leaf longevity through a specific phosphorylation of the response regulator, ARR2.; histidine kinase 3 (HK3); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 2 (TAIR:AT5G35750.1); Has 124308 Blast hits to 110912 proteins in 3043 species: Archae - 772; Bacteria - 110408; Metazoa - 31; Fungi - 2185; Plants - 2022; Viruses - 28; Other Eukaryotes - 8862 (source: NCBI BLink). & (q9m7m1|etr1_prupe : 135.0) Ethylene receptor (EC 2.7.13.3) - Prunus persica (Peach) & (reliability: 280.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000806.13","No alias","Cyanophora paradoxa","(at5g23630 : 453.0) A member of the eukaryotic type V subfamily (P5) of P-type ATPase cation pumps; MIA is most similar to the human P5 ATPase ATY2(44% identity) and to Spf1p from S. cerevisiae (41% identity). Highly abundant in the endoplasmic reticulum and small vesicles of developing pollen grains and tapetum cells. T-DNA insertional mutants of MIA suffer from imbalances in cation homeostasis and exhibit a severe reduction in fertility. Mutant microspores fail to separate from tetrads and pollen grains are fragile with an abnormal morphology and altered cell wall structure.  MIA is also named PDR2 and was shown to be required for proper expression of SCARECROW (SCR), a key regulator of root patterning, and for stem-cell maintenance in Pi-deprived roots.; phosphate deficiency response 2 (PDR2); FUNCTIONS IN: cation-transporting ATPase activity; INVOLVED IN: in 6 processes; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, unknown pump specificity (type V) (InterPro:IPR006544), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: calcium ATPase 2 (TAIR:AT4G37640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 906.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000806.53","No alias","Cyanophora paradoxa","(at1g54220 : 333.0) Dihydrolipoamide acetyltransferase, long form protein; FUNCTIONS IN: dihydrolipoyllysine-residue acetyltransferase activity, acyltransferase activity; INVOLVED IN: pyruvate metabolic process, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Dihydrolipoamide acetyltransferase, long form (InterPro:IPR006257), E3 binding (InterPro:IPR004167), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide acetyltransferase, long form protein (TAIR:AT3G13930.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 666.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000821.32","No alias","Cyanophora paradoxa","(at3g48770 : 126.0) DNA binding;ATP binding; FUNCTIONS IN: DNA binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, BED-type predicted (InterPro:IPR003656), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G28020.1); Has 779 Blast hits to 661 proteins in 171 species: Archae - 6; Bacteria - 159; Metazoa - 152; Fungi - 67; Plants - 310; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). & (reliability: 252.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000821.42","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000821.9","No alias","Cyanophora paradoxa","(at1g67730 : 151.0) Encodes one of the two Arabidopsis homologues to YBR159w encoding a S. cerevisiae beta-ketoacyl reductase (KCR), which catalyzes the first reduction during VLCFA (very long chain fatty acids, >18 carbon) elongation: KCR1 (At1g67730), KCR2 (At1g24470). Complementation of the yeast ybr159Delta mutant demonstrated that the two KCR proteins are divergent and that only AtKCR1 can restore heterologous elongase activity similar to the native yeast KCR gene.; beta-ketoacyl reductase 1 (KCR1); FUNCTIONS IN: oxidoreductase activity, ketoreductase activity, acetoacetyl-CoA reductase activity; INVOLVED IN: very long-chain fatty acid biosynthetic process, embryo development, cuticle development; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: beta-ketoacyl reductase 2 (TAIR:AT1G24470.1); Has 86831 Blast hits to 86679 proteins in 3373 species: Archae - 739; Bacteria - 59178; Metazoa - 5127; Fungi - 3946; Plants - 2216; Viruses - 0; Other Eukaryotes - 15625 (source: NCBI BLink). & (reliability: 302.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000852.46","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000882.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000882.18","No alias","Cyanophora paradoxa","(p37116|ncpr_phaau : 188.0) NADPH--cytochrome P450 reductase (EC 1.6.2.4) (CPR) (P450R) - Phaseolus aureus (Mung bean) (Vigna radiata) & (at4g24520 : 180.0) Encodes a cyp450 reductase likely to be involved in phenylpropanoid metabolism.; P450 reductase 1 (ATR1); CONTAINS InterPro DOMAIN/s: Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), FAD-binding, type 1 (InterPro:IPR003097), Flavodoxin/nitric oxide synthase (InterPro:IPR008254), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), NADPH Cytochrome P450 Reductase (InterPro:IPR015702); BEST Arabidopsis thaliana protein match is: P450 reductase 2 (TAIR:AT4G30210.2). & (reliability: 340.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000889.43","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000912.45","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000912.46","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000912.47","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000939.6","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000944.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000955.11","No alias","Cyanophora paradoxa","(at4g09020 : 389.0) Encodes an isoamylase-like protein. Mutant studies show that the gene is strongly involved in starch breakdown. A GUS-protein fusion product was shown to localize to the surface of chloroplastic structures reminiscent of starch granules. In the mutants, the chloroplastic α-amylase AMY3 is upregulated.; isoamylase 3 (ISA3); FUNCTIONS IN: isoamylase activity, alpha-amylase activity; INVOLVED IN: carbohydrate metabolic process, starch catabolic process; LOCATED IN: chloroplast, chloroplast stroma, chloroplast starch grain; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl hydrolase, family 13, all-beta (InterPro:IPR013780), Immunoglobulin-like fold (InterPro:IPR013783), Glycoside hydrolase, family 13, N-terminal (InterPro:IPR004193), Immunoglobulin E-set (InterPro:IPR014756), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047); BEST Arabidopsis thaliana protein match is: isoamylase 1 (TAIR:AT2G39930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 704.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000970.29","No alias","Cyanophora paradoxa","(at5g20270 : 125.0) heptahelical transmembrane protein homologous to human adiponectin receptors and progestin receptors; heptahelical transmembrane protein1 (HHP1); FUNCTIONS IN: receptor activity; INVOLVED IN: response to salt stress, response to hormone stimulus, response to sucrose stimulus; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Hly-III related (InterPro:IPR004254); BEST Arabidopsis thaliana protein match is: heptahelical transmembrane  protein2 (TAIR:AT4G30850.2); Has 2727 Blast hits to 2656 proteins in 794 species: Archae - 0; Bacteria - 1143; Metazoa - 823; Fungi - 356; Plants - 236; Viruses - 0; Other Eukaryotes - 169 (source: NCBI BLink). & (reliability: 250.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000970.8","No alias","Cyanophora paradoxa","(at5g11560 : 82.4) catalytics; FUNCTIONS IN: catalytic activity; LOCATED IN: endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1620 (InterPro:IPR011678), Quinonprotein alcohol dehydrogenase-like (InterPro:IPR011047); Has 475 Blast hits to 428 proteins in 206 species: Archae - 4; Bacteria - 52; Metazoa - 151; Fungi - 150; Plants - 40; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink). & (reliability: 164.8) &  (original description: no original description)","protein_coding"
"evm.model.tig00000980.16","No alias","Cyanophora paradoxa","(at1g07670 : 240.0) endomembrane-type CA-ATPase 4 (ECA4); FUNCTIONS IN: calcium-transporting ATPase activity; INVOLVED IN: cation transport, calcium ion transport, metabolic process, ATP biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: guard cell, callus, cultured cell; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting (InterPro:IPR005782), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: ER-type Ca2+-ATPase 1 (TAIR:AT1G07810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q2qy12|aca4_orysa : 187.0) Probable calcium-transporting ATPase 4, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 4) - Oryza sativa (Rice) & (reliability: 480.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000984.19","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001001.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001024.37","No alias","Cyanophora paradoxa","(at1g64790 : 87.8) ILITYHIA (ILA) is a HEAT repeat protein involved in plant immunity. The gene is also involved in systemic acquired resistance induced by P. syringae expressing avrRps4. Loss-of-function mutants of ILA caused pleiotropic defects in the mutant plants. The mutant plants are smaller in size and the leaves are serrated and yellow to light green in color.; ILITYHIA (ILA); FUNCTIONS IN: binding; INVOLVED IN: systemic acquired resistance, defense response to bacterium; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024). & (reliability: 175.6) &  (original description: no original description)","protein_coding"
"evm.model.tig00001033.10","No alias","Cyanophora paradoxa","(at5g36210 : 107.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375); BEST Arabidopsis thaliana protein match is: acylaminoacyl-peptidase-related (TAIR:AT4G14570.1); Has 7796 Blast hits to 7784 proteins in 1167 species: Archae - 215; Bacteria - 4533; Metazoa - 751; Fungi - 258; Plants - 220; Viruses - 0; Other Eukaryotes - 1819 (source: NCBI BLink). & (reliability: 214.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001038.6","No alias","Cyanophora paradoxa","(at5g36880 : 570.0) Encodes a plastidic acetyl-coA synthetase. This enzyme plays a role in converting acetate to acetyl-coA in the plastids. It does not appear to be a major contributor to  fatty acid biosynthesis based on mutant phenotypes. The enzyme seems to act as a monomer and may play an important role  in preventing the toxic accumulation of fermentation products including acetaldehyde, acetate, and ethanol. It participates in  the pyruvate dehydrogenase bypass pathway; acetyl-CoA synthetase (ACS); FUNCTIONS IN: acetate-CoA ligase activity; INVOLVED IN: metabolic process, acetate metabolic process; LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acetate--CoA ligase (InterPro:IPR011904), AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl-activating enzyme 17 (TAIR:AT5G23050.1); Has 68981 Blast hits to 63577 proteins in 3326 species: Archae - 1100; Bacteria - 43606; Metazoa - 2469; Fungi - 2489; Plants - 1499; Viruses - 1; Other Eukaryotes - 17817 (source: NCBI BLink). & (reliability: 1140.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001042.22","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001042.9","No alias","Cyanophora paradoxa","(at3g27870 : 165.0) ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: metabolic process, ATP biosynthetic process, phospholipid transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT1G68710.1); Has 13753 Blast hits to 12595 proteins in 1702 species: Archae - 134; Bacteria - 4536; Metazoa - 3490; Fungi - 2070; Plants - 981; Viruses - 3; Other Eukaryotes - 2539 (source: NCBI BLink). & (reliability: 330.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001052.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001052.14","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001065.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001086.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001094.13","No alias","Cyanophora paradoxa","(at3g18290 : 278.0) Encodes BRUTUS (BTS), a putative E3 ligase protein with metal ion binding and DNA binding domains, which negatively regulates the response to iron deficiency.; BRUTUS (BTS); FUNCTIONS IN: zinc ion binding; INVOLVED IN: cellular response to iron ion starvation, embryo development ending in seed dormancy; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CTCHY-type (InterPro:IPR017921), Zinc finger, CHY-type (InterPro:IPR008913), Zinc finger, RING-type (InterPro:IPR001841), Haemerythrin/HHE cation-binding motif (InterPro:IPR012312); BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT1G74770.1); Has 1787 Blast hits to 1677 proteins in 200 species: Archae - 0; Bacteria - 15; Metazoa - 641; Fungi - 164; Plants - 725; Viruses - 2; Other Eukaryotes - 240 (source: NCBI BLink). & (reliability: 556.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001155.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001177.16","No alias","Cyanophora paradoxa","(at1g12940 : 277.0) member of High affinity nitrate transporter family; nitrate transporter2.5 (NRT2.5); FUNCTIONS IN: nitrate transmembrane transporter activity; INVOLVED IN: transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: stem, inflorescence meristem; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter 2:1 (TAIR:AT1G08090.1); Has 4805 Blast hits to 4611 proteins in 1220 species: Archae - 64; Bacteria - 3952; Metazoa - 78; Fungi - 287; Plants - 251; Viruses - 0; Other Eukaryotes - 173 (source: NCBI BLink). & (reliability: 554.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001187.6","No alias","Cyanophora paradoxa","(at4g00370 : 164.0) Encodes an inorganic phosphate transporter (PHT4;4).; ANTR2; FUNCTIONS IN: organic anion transmembrane transporter activity, inorganic phosphate transmembrane transporter activity; INVOLVED IN: transmembrane transport; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: phosphate transporter 4;1 (TAIR:AT2G29650.1); Has 37886 Blast hits to 37799 proteins in 2473 species: Archae - 506; Bacteria - 30466; Metazoa - 2514; Fungi - 1637; Plants - 427; Viruses - 0; Other Eukaryotes - 2336 (source: NCBI BLink). & (reliability: 328.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001224.19","No alias","Cyanophora paradoxa","(at3g02870 : 91.3) Encodes a L-galactose-1-phosphate phosphatase, involved in ascorbate biosynthesis.; VTC4; FUNCTIONS IN: 3'(2'),5'-bisphosphate nucleotidase activity, L-galactose-1-phosphate phosphatase activity, inositol or phosphatidylinositol phosphatase activity, inositol-1(or 4)-monophosphatase activity; INVOLVED IN: sulfur metabolic process, L-ascorbic acid biosynthetic process, response to karrikin, response to cold, inositol biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol monophosphatase, conserved site (InterPro:IPR020550), Inositol monophosphatase (InterPro:IPR000760), Inositol monophosphatase, Lithium-sensitive (InterPro:IPR020552), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: myo-inositol monophosphatase like 1 (TAIR:AT1G31190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 182.6) &  (original description: no original description)","protein_coding"
"evm.model.tig00001224.23","No alias","Cyanophora paradoxa","(at5g08610 : 99.4) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G08620.1); Has 49840 Blast hits to 44437 proteins in 3094 species: Archae - 842; Bacteria - 25196; Metazoa - 7587; Fungi - 5309; Plants - 2787; Viruses - 50; Other Eukaryotes - 8069 (source: NCBI BLink). & (reliability: 198.8) &  (original description: no original description)","protein_coding"
"evm.model.tig00001292.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001335.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001343.12","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001388.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001443.1","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001443.3","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001545.4","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020510.134","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020537.26","No alias","Cyanophora paradoxa","(at4g33680 : 376.0) Involved in disease resistance against Pseudomonas syringae. mutants have elevated SA levels, a low level of spontaneous cell death, callose deposition, and enlarged cells in leaves. genetically maps on chr 4 between L23H3 and nga1139.; ABERRANT GROWTH AND DEATH 2 (AGD2); FUNCTIONS IN: transaminase activity, copper ion binding, L,L-diaminopimelate aminotransferase activity; INVOLVED IN: lysine biosynthetic process via diaminopimelate, systemic acquired resistance, salicylic acid mediated signaling pathway; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: LL-diaminopimelate aminotransferase, plant-related (InterPro:IPR019942), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: AGD2-like defense response protein 1 (TAIR:AT2G13810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 752.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020538.45","No alias","Cyanophora paradoxa","(at2g22250 : 112.0) Encodes a prokaryotic-type plastidic aspartate aminotransferase with glutamate/aspartate-prephenate aminotransferase (PAT) activity.; aspartate aminotransferase (AAT); FUNCTIONS IN: L-aspartate:2-oxoglutarate aminotransferase activity, transferase activity, transferring nitrogenous groups, pyridoxal phosphate binding, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT1G77670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 224.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020553.102","No alias","Cyanophora paradoxa","(at4g25120 : 159.0) Encodes a homolog of the yeast SRS2 (Suppressor of RAD Six-screen mutant 2) helicase.  The Arabidopsis SRS2 is a functional 3í- to 5í-helicase.  Biochemical studies show that SRS2 disrupts recombinogenic DNA intermediates and facilitates single strand annealing.; SUPPRESSOR OF RAD SIX-SCREEN MUTANT 2 (SRS2); CONTAINS InterPro DOMAIN/s: DNA helicase, UvrD-like, C-terminal (InterPro:IPR014017), Helicase, superfamily 1, UvrD-related (InterPro:IPR014016), DNA helicase, UvrD/REP type (InterPro:IPR000212); Has 26201 Blast hits to 22116 proteins in 2711 species: Archae - 259; Bacteria - 18888; Metazoa - 18; Fungi - 176; Plants - 81; Viruses - 13; Other Eukaryotes - 6766 (source: NCBI BLink). & (reliability: 318.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020553.103","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020553.275","No alias","Cyanophora paradoxa","(o65361|p5cs_mescr : 290.0) Delta 1-pyrroline-5-carboxylate synthetase (P5CS) [Includes: Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase) (GK); Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma- & (at2g39800 : 289.0) delta1-pyrroline-5-carboxylate synthase 1 (P5CS1); CONTAINS InterPro DOMAIN/s: Glutamate 5-kinase (InterPro:IPR001057), Glutamate 5-kinase, conserved site (InterPro:IPR019797), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Gamma-glutamyl phosphate reductase GPR, conserved site (InterPro:IPR020593), Aldehyde dehydrogenase, C-terminal (InterPro:IPR016163), Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Delta l-pyrroline-5-carboxylate synthetase (InterPro:IPR005766), Gamma-glutamyl phosphate reductase GPR (InterPro:IPR000965), Aldehyde dehydrogenase (InterPro:IPR015590), Glutamate 5-kinase, ProB-related (InterPro:IPR005715); BEST Arabidopsis thaliana protein match is: delta 1-pyrroline-5-carboxylate synthase 2 (TAIR:AT3G55610.1). & (reliability: 578.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020556.18","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020560.17","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020603.39","No alias","Cyanophora paradoxa","(at1g64780 : 282.0) encodes an ammonium transporter protein believed to act as a high affinity transporter. It is expressed in the root, primarily in endodermal and cortical cells, and contributes to ammonium uptake in the root.; ammonium transporter 1;2 (AMT1;2); CONTAINS InterPro DOMAIN/s: Ammonium transporter (InterPro:IPR001905), Ammonium transporter, conserved site (InterPro:IPR018047); BEST Arabidopsis thaliana protein match is: ammonium transporter 1;1 (TAIR:AT4G13510.1); Has 11676 Blast hits to 11662 proteins in 2073 species: Archae - 224; Bacteria - 4692; Metazoa - 520; Fungi - 427; Plants - 507; Viruses - 0; Other Eukaryotes - 5306 (source: NCBI BLink). & (reliability: 564.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020610.121","No alias","Cyanophora paradoxa","(at3g29360 : 99.8) UDP-glucose 6-dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucose/GDP-mannose dehydrogenase, N-terminal (InterPro:IPR001732), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), UDP-glucose/GDP-mannose dehydrogenase, dimerisation and substrate-binding domain (InterPro:IPR014028), UDP-glucose/GDP-mannose dehydrogenase, C-terminal (InterPro:IPR014027), NAD(P)-binding domain (InterPro:IPR016040), UDP-glucose/GDP-mannose dehydrogenase, dimerisation (InterPro:IPR014026), Nucleotide sugar dehydrogenase (InterPro:IPR017476); BEST Arabidopsis thaliana protein match is: UDP-glucose 6-dehydrogenase family protein (TAIR:AT5G39320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q96558|ugdh_soybn : 99.4) UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) - Glycine max (Soybean) & (reliability: 199.6) &  (original description: no original description)","protein_coding"
"evm.model.tig00020610.81","No alias","Cyanophora paradoxa"," (original description: no original description)","protein_coding"
"evm.model.tig00020614.45","No alias","Cyanophora paradoxa","(p51848|pdc2_orysa : 471.0) Pyruvate decarboxylase isozyme 2 (EC 4.1.1.1) (PDC) - Oryza sativa (Rice) & (at5g01320 : 465.0) Thiamine pyrophosphate dependent pyruvate decarboxylase family protein; FUNCTIONS IN: in 6 functions; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: TPP-binding enzyme, conserved site (InterPro:IPR000399), Thiamine pyrophosphate enzyme, central domain (InterPro:IPR012000), Pyruvate decarboxylase/indolepyruvate decarboxylase (InterPro:IPR012110), Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain (InterPro:IPR012001), Thiamine pyrophosphate enzyme, C-terminal TPP-binding (InterPro:IPR011766); BEST Arabidopsis thaliana protein match is: Thiamine pyrophosphate dependent pyruvate decarboxylase family protein (TAIR:AT4G33070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 930.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020614.6","No alias","Cyanophora paradoxa","(at5g54810 : 493.0) A.thaliana tryptophan synthase beta subunit (trpB); tryptophan synthase beta-subunit 1 (TSB1); FUNCTIONS IN: tryptophan synthase activity; INVOLVED IN: response to oxidative stress, tryptophan biosynthetic process, response to salt stress, indoleacetic acid biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: guard cell, root; CONTAINS InterPro DOMAIN/s: Tryptophan synthase, beta chain (InterPro:IPR006654), Tryptophan synthase, beta chain, conserved site (InterPro:IPR006653), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926); BEST Arabidopsis thaliana protein match is: tryptophan synthase beta-subunit 2 (TAIR:AT4G27070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p43284|trpb2_maize : 481.0) Tryptophan synthase beta chain 2, chloroplast precursor (EC 4.2.1.20) (Orange pericarp 2) (Fragment) - Zea mays (Maize) & (reliability: 986.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020616.37","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020629.139","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020660.47","No alias","Cyanophora paradoxa","(at2g28315 : 140.0) Nucleotide/sugar transporter family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT1G06890.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q9m7m1|etr1_prupe : 111.0) Ethylene receptor (EC 2.7.13.3) - Prunus persica (Peach) & (reliability: 280.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020675.110","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020675.37","No alias","Cyanophora paradoxa","(at5g13520 : 281.0) peptidase M1 family protein; FUNCTIONS IN: metallopeptidase activity, binding, zinc ion binding; INVOLVED IN: proteolysis, leukotriene biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M1, membrane alanine aminopeptidase (InterPro:IPR001930), Peptidase M1, membrane alanine aminopeptidase, N-terminal (InterPro:IPR014782), Peptidase M1, leukotriene A4 hydrolase, aminopeptidase C-terminal (InterPro:IPR015211), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: aminopeptidase M1 (TAIR:AT4G33090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 562.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020684.58","No alias","Cyanophora paradoxa","(at5g35750 : 114.0) Encodes histidine kinase AHK2.; histidine kinase 2 (HK2); FUNCTIONS IN: osmosensor activity, cytokinin receptor activity, protein histidine kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 3 (TAIR:AT1G27320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o49230|etr1_braol : 111.0) Ethylene receptor (EC 2.7.13.3) - Brassica oleracea (Wild cabbage) & (reliability: 228.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020704.45","No alias","Cyanophora paradoxa","(at3g17712 : 92.8) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1740 (InterPro:IPR013633); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G17740.1). & (reliability: 185.6) &  (original description: no original description)","protein_coding"
"evm.model.tig00020723.71","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020801.94","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020801.96","No alias","Cyanophora paradoxa","(at2g37770 : 89.7) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: oxidation reduction; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT2G37790.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 179.4) &  (original description: no original description)","protein_coding"
"evm.model.tig00020816.109","No alias","Cyanophora paradoxa","(p30706|plsb_pea : 214.0) Glycerol-3-phosphate acyltransferase, chloroplast precursor (EC 2.3.1.15) (GPAT) - Pisum sativum (Garden pea) & (at1g32200 : 204.0) Encodes a chloroplast glycerol-3-phosphate acyltransferase.Involved in the biosynthesis of chloroplast phosphatidylglycerol.; ATS1; FUNCTIONS IN: glycerol-3-phosphate O-acyltransferase activity; INVOLVED IN: phosphatidylglycerol biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123), Glycerol-3-phosphate O-acyltransferase (InterPro:IPR016222); Has 391 Blast hits to 391 proteins in 121 species: Archae - 0; Bacteria - 73; Metazoa - 0; Fungi - 0; Plants - 291; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). & (reliability: 408.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020824.7","No alias","Cyanophora paradoxa","(at5g10050 : 106.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G65205.1); Has 119739 Blast hits to 119523 proteins in 3734 species: Archae - 959; Bacteria - 78106; Metazoa - 7703; Fungi - 6506; Plants - 2887; Viruses - 2; Other Eukaryotes - 23576 (source: NCBI BLink). & (reliability: 212.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020830.20","No alias","Cyanophora paradoxa","(at1g63970 : 231.0) Encodes a protein with 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity. The protein's activity was confirmed by heterologous expression of phenotypic complementation of the E. coli ispF mutant. Plants defective in this gene display an albino lethal phenotype.; isoprenoid F (ISPF); FUNCTIONS IN: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity; INVOLVED IN: chlorophyll biosynthetic process, carotenoid biosynthetic process, response to light stimulus, isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core (InterPro:IPR003526); Has 6449 Blast hits to 6448 proteins in 2092 species: Archae - 0; Bacteria - 4352; Metazoa - 0; Fungi - 4; Plants - 64; Viruses - 0; Other Eukaryotes - 2029 (source: NCBI BLink). & (q9m4w3|ispf_catro : 231.0) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplast precursor (EC 4.6.1.12) (MECPS) (MECDP-synthase) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 462.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020848.88","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020902.49","No alias","Cyanophora paradoxa","(at5g37500 : 160.0) Encodes a guard cell outward potassium channel.  Belongs to the Shaker family K+ channel. This family includes five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500). Mutants have increased water consumption and limited stomatal closure in response to abscisic and jasmonic acids. It forms a heteromeric K(out) channels with SKOR. The gene is expressed ubiquitously in root and the vasculature and guard cells of leaves. Expression is suppressed during agrobacterium-induced tumor formation and increased in response to water deprivation and cold.; gated outwardly-rectifying K+ channel (GORK); FUNCTIONS IN: outward rectifier potassium channel activity, cyclic nucleotide binding, protein binding; INVOLVED IN: response to jasmonic acid stimulus, response to water deprivation, response to cold, response to abscisic acid stimulus; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), Protein of unknown function DUF3354 (InterPro:IPR021789), Ankyrin repeat-containing domain (InterPro:IPR020683), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: STELAR K+ outward rectifier (TAIR:AT3G02850.1); Has 84212 Blast hits to 35106 proteins in 1650 species: Archae - 146; Bacteria - 9486; Metazoa - 40206; Fungi - 7878; Plants - 3819; Viruses - 1287; Other Eukaryotes - 21390 (source: NCBI BLink). & (q8vyx2|akt1_orysa : 101.0) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (reliability: 320.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020903.13","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020904.118","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020904.156","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020911.46","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020927.54","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020934.35","No alias","Cyanophora paradoxa","(at3g20020 : 210.0) protein arginine methyltransferase 6 (PRMT6); FUNCTIONS IN: protein methyltransferase activity, methyltransferase activity; INVOLVED IN: protein amino acid methylation; LOCATED IN: cytoplasm; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal L11 methyltransferase, PrmA (InterPro:IPR010456); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 1A (TAIR:AT2G19670.1); Has 2687 Blast hits to 2666 proteins in 709 species: Archae - 44; Bacteria - 791; Metazoa - 996; Fungi - 246; Plants - 285; Viruses - 0; Other Eukaryotes - 325 (source: NCBI BLink). & (reliability: 420.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020961.123","No alias","Cyanophora paradoxa","(at1g62680 : 142.0) Pentatricopeptide repeat (PPR) superfamily protein; LOCATED IN: chloroplast; EXPRESSED IN: shoot apex, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G63130.1); Has 64113 Blast hits to 15255 proteins in 308 species: Archae - 5; Bacteria - 67; Metazoa - 910; Fungi - 1189; Plants - 59601; Viruses - 0; Other Eukaryotes - 2341 (source: NCBI BLink). & (q76c99|rf1_orysa : 125.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 266.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020961.60","No alias","Cyanophora paradoxa","(at2g43400 : 562.0) Encodes a unique electron-transfer flavoprotein:ubiquinone oxidoreductase that is localized to the mitochondrion. Mutants are more sensitive to sugar starvation when plants are kept in the dark for long periods.; electron-transfer flavoprotein:ubiquinone oxidoreductase (ETFQO); FUNCTIONS IN: electron carrier activity, catalytic activity, electron-transferring-flavoprotein dehydrogenase activity; INVOLVED IN: response to absence of light, leucine catabolic process; LOCATED IN: mitochondrial envelope, mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Electron transfer flavoprotein-ubiquinone oxidoreductase (InterPro:IPR007859); Has 5881 Blast hits to 5877 proteins in 1100 species: Archae - 188; Bacteria - 2470; Metazoa - 147; Fungi - 158; Plants - 31; Viruses - 0; Other Eukaryotes - 2887 (source: NCBI BLink). & (reliability: 1124.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020964.35","No alias","Cyanophora paradoxa","(at2g32950 : 280.0) Represses photomorphogenesis and induces skotomorphogenesis in the dark. Contains a ring finger zinc-binding motif, a coiled-coil domain, and several WD-40 repeats, similar to G-beta proteins. The C-terminus has homology to TAFII80, a subunit of the TFIID component of the RNA polymerase II of Drosophila. Nuclear localization in the dark and cytoplasmic in the light.; CONSTITUTIVE PHOTOMORPHOGENIC 1 (COP1); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: SPA1-related 2 (TAIR:AT4G11110.1); Has 42218 Blast hits to 27649 proteins in 756 species: Archae - 30; Bacteria - 4454; Metazoa - 17716; Fungi - 8958; Plants - 5306; Viruses - 46; Other Eukaryotes - 5708 (source: NCBI BLink). & (p93471|cop1_pea : 276.0) E3 ubiquitin ligase protein COP1 (EC 6.3.2.-) (Constitutive photomorphogenesis protein 1) - Pisum sativum (Garden pea) & (reliability: 560.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020965.63","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020996.29","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021012.17","No alias","Cyanophora paradoxa","(at4g39460 : 149.0) Encodes a plastid metabolite transporter required for the import of S-Adenosylmethionine from the cytosol. Impaired function of SAMT1 led to decreased accumulation of prenyllipids and mainly affected the chlorophyll pathway.; S-adenosylmethionine carrier 1 (SAMC1); CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine carrier 2 (TAIR:AT1G34065.1). & (p29518|bt1_maize : 99.0) Protein brittle-1, chloroplast precursor - Zea mays (Maize) & (reliability: 298.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021036.109","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021127.109","No alias","Cyanophora paradoxa","(o80433|cisy_dauca : 129.0) Citrate synthase, mitochondrial precursor (EC 2.3.3.1) - Daucus carota (Carrot) & (at3g60100 : 127.0) citrate synthase 5 (CSY5); FUNCTIONS IN: citrate (SI)-synthase activity, transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer; INVOLVED IN: cellular carbohydrate metabolic process, tricarboxylic acid cycle; LOCATED IN: mitochondrion; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, 4 leaf senescence stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Citrate synthase-like, large alpha subdomain (InterPro:IPR016142), Citrate synthase, eukaryotic (InterPro:IPR010109), Citrate synthase-like (InterPro:IPR002020), Citrate synthase active site (InterPro:IPR019810), Citrate synthase-like, core (InterPro:IPR016141); BEST Arabidopsis thaliana protein match is: Citrate synthase family protein (TAIR:AT2G44350.1); Has 10430 Blast hits to 10424 proteins in 2755 species: Archae - 158; Bacteria - 6931; Metazoa - 258; Fungi - 314; Plants - 178; Viruses - 0; Other Eukaryotes - 2591 (source: NCBI BLink). & (reliability: 254.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021127.110","No alias","Cyanophora paradoxa","(at2g44350 : 323.0) encodes a mitochrondrion targeted citrate synthase, the first enzyme of the tricarboxylic acid cycle, catalyzing the condensation of acetyl-CoA and oxaloacetate, finally yielding citrate and CoA.; ATCS; FUNCTIONS IN: citrate (SI)-synthase activity, zinc ion binding, ATP binding; INVOLVED IN: response to cadmium ion, tricarboxylic acid cycle; LOCATED IN: mitochondrion, cell wall, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Citrate synthase-like, large alpha subdomain (InterPro:IPR016142), Citrate synthase, eukaryotic (InterPro:IPR010109), Citrate synthase active site (InterPro:IPR019810), Citrate synthase-like, core (InterPro:IPR016141), Citrate synthase-like (InterPro:IPR002020); BEST Arabidopsis thaliana protein match is: citrate synthase 5 (TAIR:AT3G60100.1); Has 10608 Blast hits to 10602 proteins in 2793 species: Archae - 158; Bacteria - 6984; Metazoa - 258; Fungi - 321; Plants - 178; Viruses - 0; Other Eukaryotes - 2709 (source: NCBI BLink). & (o80433|cisy_dauca : 323.0) Citrate synthase, mitochondrial precursor (EC 2.3.3.1) - Daucus carota (Carrot) & (reliability: 646.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021127.189","No alias","Cyanophora paradoxa","(at3g23790 : 238.0) acyl activating enzyme 16 (AAE16); FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding (InterPro:IPR020459), AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl-activating enzyme 15 (TAIR:AT4G14070.1); Has 72182 Blast hits to 54949 proteins in 3465 species: Archae - 1133; Bacteria - 50819; Metazoa - 2739; Fungi - 2717; Plants - 2582; Viruses - 1; Other Eukaryotes - 12191 (source: NCBI BLink). & (reliability: 476.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021127.43","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021127.48","No alias","Cyanophora paradoxa","(at5g28290 : 199.0) Encodes AtNek3, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals.  Plant Neks might be involved in plant development processes.; NIMA-related kinase 3 (NEK3); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: NIMA-related kinase 2 (TAIR:AT3G04810.2); Has 124194 Blast hits to 122056 proteins in 3852 species: Archae - 107; Bacteria - 14304; Metazoa - 45560; Fungi - 12271; Plants - 30693; Viruses - 504; Other Eukaryotes - 20755 (source: NCBI BLink). & (q5qn75|m2k1_orysa : 94.0) Mitogen-activated protein kinase kinase 1 (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK1) (OsMEK1) - Oryza sativa (Rice) & (reliability: 398.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021135.2","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021179.34","No alias","Cyanophora paradoxa","(p12628|maox_phavu : 528.0) NADP-dependent malic enzyme (EC 1.1.1.40) (NADP-ME) - Phaseolus vulgaris (Kidney bean) (French bean) & (at5g11670 : 525.0) The malic enzyme (EC 1.1.1.40) encoded by AtNADP-ME2 is presumably a cytosolic enzyme involved in malate metabolism and possibly assisting the oxidative pentose phosphate pathway. AtNADP-ME2 counts for the major part of NADP-ME activity in mature tissues of Arabidopsis.; NADP-malic enzyme 2 (NADP-ME2); FUNCTIONS IN: malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity, oxidoreductase activity, acting on NADH or NADPH, NAD or NADP as acceptor, malic enzyme activity; INVOLVED IN: response to cadmium ion, malate metabolic process, pentose-phosphate shunt, oxidative branch, protein homooligomerization; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Malic enzyme, NAD-binding (InterPro:IPR012302), Malic oxidoreductase (InterPro:IPR001891), Malic enzyme, conserved site (InterPro:IPR015884), Malic enzyme, N-terminal (InterPro:IPR012301), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NADP-malic enzyme 3 (TAIR:AT5G25880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1050.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021221.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021234.5","No alias","Cyanophora paradoxa","(at1g51500 : 127.0) Encodes an ABC transporter involved in cuticular wax biosynthesis. Lines carrying recessive mutations in this locus have weakly glaucous stem surface, and relative elevated secondary alcohols and ketones.; ECERIFERUM 5 (CER5); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: wax biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G21090.1); Has 373832 Blast hits to 343583 proteins in 4060 species: Archae - 6936; Bacteria - 298137; Metazoa - 8223; Fungi - 6589; Plants - 5451; Viruses - 9; Other Eukaryotes - 48487 (source: NCBI BLink). & (q7fmw4|pdr15_orysa : 97.8) Pleiotropic drug resistance protein 15 - Oryza sativa (Rice) & (reliability: 254.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021244.38","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021281.2","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021348.25","No alias","Cyanophora paradoxa","(at3g08850 : 521.0) Encodes one of two Arabidopsis RAPTOR/KOG1 homologs.  RAPTOR proteins are binding partners of the target of rapamycin kinase that is present in all eukaryotes and play a central role in the stimulation of cell growth and metabolism in response to nutrients.   Mutants show embryo lethal phenotype which occurs at pre-globular stage. May interact with TOR kinase in a rapamycin like signaling pathway. Interacts with TOR and S6K1 in vivo. Overexpression of RAPTOR1 rendered the S6K1 osmotic stress insensitive.; RAPTOR1; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), WD40 repeat (InterPro:IPR001680), Regulatory associated protein of TOR (InterPro:IPR004083), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Armadillo-type fold (InterPro:IPR016024), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: HEAT repeat ;WD domain, G-beta repeat protein protein (TAIR:AT5G01770.1); Has 7799 Blast hits to 6065 proteins in 379 species: Archae - 2; Bacteria - 1590; Metazoa - 2741; Fungi - 1618; Plants - 862; Viruses - 0; Other Eukaryotes - 986 (source: NCBI BLink). & (reliability: 1012.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021428.28","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021432.43","No alias","Cyanophora paradoxa","(at1g24180 : 407.0) Arabidopsis thaliana pyruvate dehydrogenase E1a-like subunit. 81% identical to a previously characterized Arabidopsis mitochondrial PDH E1a-subunit, At1g59900; IAA-CONJUGATE-RESISTANT 4 (IAR4); FUNCTIONS IN: cobalt ion binding, pyruvate dehydrogenase (acetyl-transferring) activity, zinc ion binding; INVOLVED IN: response to salt stress, metabolic process; LOCATED IN: cytosol, mitochondrion, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dehydrogenase, E1 component (InterPro:IPR001017), Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y (InterPro:IPR017597); BEST Arabidopsis thaliana protein match is: pyruvate dehydrogenase complex E1 alpha subunit (TAIR:AT1G59900.1); Has 9959 Blast hits to 9956 proteins in 1842 species: Archae - 124; Bacteria - 6117; Metazoa - 560; Fungi - 255; Plants - 209; Viruses - 0; Other Eukaryotes - 2694 (source: NCBI BLink). & (p52903|odpa_soltu : 401.0) Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial precursor (EC 1.2.4.1) (PDHE1-A) - Solanum tuberosum (Potato) & (reliability: 814.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021464.40","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021489.24","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021517.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021537.73","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021579.7","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021616.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021621.16","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021621.7","No alias","Cyanophora paradoxa","(q05001|ncpr_catro : 238.0) NADPH--cytochrome P450 reductase (EC 1.6.2.4) (CPR) (P450R) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at4g30210 : 230.0) Encodes NADPH-cytochrome P450 reductase that catalyzes the first oxidative step of the phenylpropanoid general pathway.; P450 reductase 2 (ATR2); FUNCTIONS IN: NADPH-hemoprotein reductase activity; INVOLVED IN: phenylpropanoid metabolic process; LOCATED IN: endoplasmic reticulum, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Flavodoxin/nitric oxide synthase (InterPro:IPR008254), Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), FAD-binding, type 1 (InterPro:IPR003097), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), NADPH Cytochrome P450 Reductase (InterPro:IPR015702); BEST Arabidopsis thaliana protein match is: P450 reductase 1 (TAIR:AT4G24520.1); Has 6728 Blast hits to 6356 proteins in 1574 species: Archae - 5; Bacteria - 3354; Metazoa - 1038; Fungi - 894; Plants - 570; Viruses - 0; Other Eukaryotes - 867 (source: NCBI BLink). & (reliability: 446.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021680.27","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021742.6","No alias","Cyanophora paradoxa","(at1g45010 : 87.8) TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; CONTAINS InterPro DOMAIN/s: TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein (TAIR:AT1G35180.1); Has 219 Blast hits to 219 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 76; Fungi - 6; Plants - 93; Viruses - 3; Other Eukaryotes - 41 (source: NCBI BLink). & (reliability: 175.6) &  (original description: no original description)","protein_coding"
"Glyma.01G020700","No alias","Glycine max","Concanavalin A-like lectin protein kinase family protein","protein_coding"
"Glyma.01G078300","No alias","Glycine max","cytochrome P450, family 83, subfamily B, polypeptide 1","protein_coding"
"Glyma.01G114500","No alias","Glycine max","glucose-6-phosphate/phosphate translocator 2","protein_coding"
"Glyma.01G132866","No alias","Glycine max","Protein kinase superfamily protein","protein_coding"
"Glyma.01G174400","No alias","Glycine max","Major facilitator superfamily protein","protein_coding"
"Glyma.01G187000","No alias","Glycine max","Domain of unknown function (DUF313)","protein_coding"
"Glyma.01G213900","No alias","Glycine max","Subtilase family protein","protein_coding"
"Glyma.02G023600","No alias","Glycine max","Disease resistance protein (TIR-NBS-LRR class) family","protein_coding"
"Glyma.02G070100","No alias","Glycine max","3\'-5\'-exoribonuclease family protein","protein_coding"
"Glyma.02G120600","No alias","Glycine max","Copper amine oxidase family protein","protein_coding"
"Glyma.02G160400","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Glyma.02G164100","No alias","Glycine max","4\'-phosphopantetheinyl transferase superfamily","protein_coding"
"Glyma.02G182000","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.02G207600","No alias","Glycine max","Eukaryotic aspartyl protease family protein","protein_coding"
"Glyma.02G218800","No alias","Glycine max","cation/H+ exchanger 3","protein_coding"
"Glyma.02G266000","No alias","Glycine max","IQ-domain 33","protein_coding"
"Glyma.02G270000","No alias","Glycine max","serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime gamma","protein_coding"
"Glyma.02G281400","No alias","Glycine max","Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein","protein_coding"
"Glyma.02G294700","No alias","Glycine max","Pectin lyase-like superfamily protein","protein_coding"
"Glyma.03G099400","No alias","Glycine max","Ribosomal L18p/L5e family protein","protein_coding"
"Glyma.03G105900","No alias","Glycine max","Domain of unknown function (DUF313)","protein_coding"
"Glyma.03G119900","No alias","Glycine max","SU(VAR)3-9 homolog 3","protein_coding"
"Glyma.03G134100","No alias","Glycine max","Nucleotide-sugar transporter family protein","protein_coding"
"Glyma.04G021600","No alias","Glycine max","expansin 11","protein_coding"
"Glyma.04G054800","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.04G086200","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.04G105251","No alias","Glycine max","sulfate transporter 1;3","protein_coding"
"Glyma.04G126600","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.04G142500","No alias","Glycine max","AGAMOUS-like 15","protein_coding"
"Glyma.04G149800","No alias","Glycine max","Protein kinase superfamily protein","protein_coding"
"Glyma.04G218200","No alias","Glycine max","Nucleotide-sugar transporter family protein","protein_coding"
"Glyma.05G046900","No alias","Glycine max","arginosuccinate synthase family","protein_coding"
"Glyma.05G049600","No alias","Glycine max","BCL-2-associated athanogene 1","protein_coding"
"Glyma.05G136700","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.05G152700","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.05G160301","No alias","Glycine max","Protein of unknown function (DUF177)","protein_coding"
"Glyma.05G190500","No alias","Glycine max","Zinc finger C-x8-C-x5-C-x3-H type family protein","protein_coding"
"Glyma.05G214500","No alias","Glycine max","early nodulin-like protein 14","protein_coding"
"Glyma.05G235000","No alias","Glycine max","MMS ZWEI homologue 1","protein_coding"
"Glyma.05G241000","No alias","Glycine max","PLATZ transcription factor family protein","protein_coding"
"Glyma.06G037100","No alias","Glycine max","Protein of unknown function, DUF547","protein_coding"
"Glyma.06G073600","No alias","Glycine max","Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein","protein_coding"
"Glyma.06G076700","No alias","Glycine max","Plant calmodulin-binding protein-related","protein_coding"
"Glyma.06G096700","No alias","Glycine max","L-Aspartase-like family protein","protein_coding"
"Glyma.06G102900","No alias","Glycine max","methyl-CPG-binding domain 8","protein_coding"
"Glyma.06G119102","No alias","Glycine max","gibberellin 20-oxidase 3","protein_coding"
"Glyma.06G123400","No alias","Glycine max","nodulin MtN21 /EamA-like transporter family protein","protein_coding"
"Glyma.06G126350","No alias","Glycine max","Nucleic acid-binding, OB-fold-like protein","protein_coding"
"Glyma.06G137800","No alias","Glycine max","nascent polypeptide-associated complex subunit alpha-like protein 2","protein_coding"
"Glyma.06G220300","No alias","Glycine max","Phospholipid/glycerol acyltransferase family protein","protein_coding"
"Glyma.06G263000","No alias","Glycine max","mRNA capping enzyme family protein","protein_coding"
"Glyma.07G003500","No alias","Glycine max","RNA-binding (RRM/RBD/RNP motifs) family protein","protein_coding"
"Glyma.07G044100","No alias","Glycine max","GDSL-motif lipase 5","protein_coding"
"Glyma.07G119200","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Glyma.07G140300","No alias","Glycine max","glutathione S-transferase tau 7","protein_coding"
"Glyma.08G032400","No alias","Glycine max","profilin 5","protein_coding"
"Glyma.08G078600","No alias","Glycine max","cell division control 2","protein_coding"
"Glyma.08G086200","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.08G222000","No alias","Glycine max","Cation efflux family protein","protein_coding"
"Glyma.08G237300","No alias","Glycine max","RGA-like 1","protein_coding"
"Glyma.08G243300","No alias","Glycine max","F-box family protein","protein_coding"
"Glyma.08G261500","No alias","Glycine max","Integrase-type DNA-binding superfamily protein","protein_coding"
"Glyma.08G306100","No alias","Glycine max","Mitochondrial transcription termination factor family protein","protein_coding"
"Glyma.08G319100","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.09G003800","No alias","Glycine max","Pectin lyase-like superfamily protein","protein_coding"
"Glyma.09G004900","No alias","Glycine max","F-box family protein with a domain of unknown function (DUF295)","protein_coding"
"Glyma.09G005000","No alias","Glycine max","F-box family protein with a domain of unknown function (DUF295)","protein_coding"
"Glyma.09G022800","No alias","Glycine max","Peroxidase superfamily protein","protein_coding"
"Glyma.09G083000","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.09G121000","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.09G125500","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.09G129700","No alias","Glycine max","CBS domain-containing protein with a domain of unknown function (DUF21)","protein_coding"
"Glyma.09G195200","No alias","Glycine max","Protein of unknown function (DUF1278)","protein_coding"
"Glyma.09G224500","No alias","Glycine max","Glycosyl hydrolase superfamily protein","protein_coding"
"Glyma.09G224800","No alias","Glycine max","Pectin lyase-like superfamily protein","protein_coding"
"Glyma.09G247100","No alias","Glycine max","mitochondrial acyl carrier protein 1","protein_coding"
"Glyma.09G265700","No alias","Glycine max","NB-ARC domain-containing disease resistance protein","protein_coding"
"Glyma.09G283800","No alias","Glycine max","K-box region and MADS-box transcription factor family protein","protein_coding"
"Glyma.10G049300","No alias","Glycine max","Tudor/PWWP/MBT superfamily protein","protein_coding"
"Glyma.10G074300","No alias","Glycine max","4\'-phosphopantetheinyl transferase superfamily","protein_coding"
"Glyma.10G082000","No alias","Glycine max","Dof-type zinc finger DNA-binding family protein","protein_coding"
"Glyma.10G084700","No alias","Glycine max","AGAMOUS-like 62","protein_coding"
"Glyma.10G085600","No alias","Glycine max","AGAMOUS-like 62","protein_coding"
"Glyma.10G103500","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.10G106400","No alias","Glycine max","Calcium-binding EF-hand family protein","protein_coding"
"Glyma.10G114800","No alias","Glycine max","Nucleic acid-binding, OB-fold-like protein","protein_coding"
"Glyma.10G246200","No alias","Glycine max","TCP family transcription factor","protein_coding"
"Glyma.10G256333","No alias","Glycine max","Xanthine/uracil permease family protein","protein_coding"
"Glyma.10G273800","No alias","Glycine max","C2H2 and C2HC zinc fingers superfamily protein","protein_coding"
"Glyma.10G288600","No alias","Glycine max","Calcineurin-like metallo-phosphoesterase superfamily protein","protein_coding"
"Glyma.11G055000","No alias","Glycine max","Domain of unknown function (DUF313)","protein_coding"
"Glyma.11G192400","No alias","Glycine max","C2H2 and C2HC zinc fingers superfamily protein","protein_coding"
"Glyma.11G233600","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.12G000700","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.12G016051","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.12G086000","No alias","Glycine max","Plant protein of unknown function (DUF868)","protein_coding"
"Glyma.12G101200","No alias","Glycine max","Peroxidase superfamily protein","protein_coding"
"Glyma.12G102000","No alias","Glycine max","terpene synthase-like sequence-1,8-cineole","protein_coding"
"Glyma.12G103400","No alias","Glycine max","Protein with RNI-like/FBD-like domains","protein_coding"
"Glyma.12G114450","No alias","Glycine max","O-acyltransferase (WSD1-like) family protein","protein_coding"
"Glyma.12G175901","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.12G191600","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Glyma.12G230100","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.12G233000","No alias","Glycine max","Leucine-rich repeat transmembrane protein kinase","protein_coding"
"Glyma.12G235400","No alias","Glycine max","Eukaryotic aspartyl protease family protein","protein_coding"
"Glyma.13G034100","No alias","Glycine max","K-box region and MADS-box transcription factor family protein","protein_coding"
"Glyma.13G061800","No alias","Glycine max","Protein of unknown function (DUF1997)","protein_coding"
"Glyma.13G073400","No alias","Glycine max","myb domain protein 33","protein_coding"
"Glyma.13G079500","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.13G117200","No alias","Glycine max","transcription regulatory protein SNF5, putative (BSH)","protein_coding"
"Glyma.13G124400","No alias","Glycine max","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein","protein_coding"
"Glyma.13G131600","No alias","Glycine max","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"Glyma.13G141400","No alias","Glycine max","SLOW GROWTH 1","protein_coding"
"Glyma.13G154600","No alias","Glycine max","4\'-phosphopantetheinyl transferase superfamily","protein_coding"
"Glyma.13G165100","No alias","Glycine max","glutamate receptor 3.4","protein_coding"
"Glyma.13G200500","No alias","Glycine max","Eukaryotic aspartyl protease family protein","protein_coding"
"Glyma.13G220300","No alias","Glycine max","myosin heavy chain-related","protein_coding"
"Glyma.13G220900","No alias","Glycine max","Early-responsive to dehydration stress protein (ERD4)","protein_coding"
"Glyma.13G221200","No alias","Glycine max","Phototropic-responsive NPH3 family protein","protein_coding"
"Glyma.13G235900","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.13G247400","No alias","Glycine max","Zinc finger, RING-type;Transcription factor jumonji/aspartyl beta-hydroxylase","protein_coding"
"Glyma.13G266600","No alias","Glycine max","BES1/BZR1 homolog 4","protein_coding"
"Glyma.13G267400","No alias","Glycine max","WRKY DNA-binding protein 70","protein_coding"
"Glyma.13G284600","No alias","Glycine max","Auxin-responsive GH3 family protein","protein_coding"
"Glyma.13G287100","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.13G308100","No alias","Glycine max","RING-box 1","protein_coding"
"Glyma.13G311000","No alias","Glycine max","FASCICLIN-like arabinogalactan protein 17 precursor","protein_coding"
"Glyma.14G025750","No alias","Glycine max","F-box family protein","protein_coding"
"Glyma.14G050000","No alias","Glycine max","Zinc finger C-x8-C-x5-C-x3-H type family protein","protein_coding"
"Glyma.14G060900","No alias","Glycine max","Ribosomal protein L10 family protein","protein_coding"
"Glyma.14G073500","No alias","Glycine max","tubby like protein 6","protein_coding"
"Glyma.14G125801","No alias","Glycine max","Transmembrane amino acid transporter family protein","protein_coding"
"Glyma.14G129900","No alias","Glycine max","ArfGap/RecO-like zinc finger domain-containing protein","protein_coding"
"Glyma.14G157900","No alias","Glycine max","wall associated kinase 5","protein_coding"
"Glyma.14G160200","No alias","Glycine max","F-box and associated interaction domains-containing protein","protein_coding"
"Glyma.14G170400","No alias","Glycine max","Calcium-binding EF-hand family protein","protein_coding"
"Glyma.14G204800","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.15G048700","No alias","Glycine max","protein-protein interaction regulator family protein","protein_coding"
"Glyma.15G110500","No alias","Glycine max","Pectin lyase-like superfamily protein","protein_coding"
"Glyma.15G117500","No alias","Glycine max","4\'-phosphopantetheinyl transferase superfamily","protein_coding"
"Glyma.15G125500","No alias","Glycine max","FAR1-related sequence 8","protein_coding"
"Glyma.15G136400","No alias","Glycine max","evolutionarily conserved C-terminal region 7","protein_coding"
"Glyma.15G138800","No alias","Glycine max","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"Glyma.15G151600","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.15G173650","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.15G174965","No alias","Glycine max","zinc finger WD40 repeat protein 1","protein_coding"
"Glyma.15G185400","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.15G223600","No alias","Glycine max","cycloartenol synthase 1","protein_coding"
"Glyma.16G012800","No alias","Glycine max","RING/U-box superfamily protein","protein_coding"
"Glyma.16G043900","No alias","Glycine max","Protein of unknown function DUF106, transmembrane","protein_coding"
"Glyma.16G079150","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.16G144500","No alias","Glycine max","Pyridoxal phosphate (PLP)-dependent transferases superfamily protein","protein_coding"
"Glyma.16G161900","No alias","Glycine max","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding"
"Glyma.16G197300","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.16G207200","No alias","Glycine max","histone-lysine N-methyltransferase ASHH3","protein_coding"
"Glyma.16G213200","No alias","Glycine max","Succinyl-CoA ligase, alpha subunit","protein_coding"
"Glyma.16G216000","No alias","Glycine max","Polynucleotidyl transferase, ribonuclease H-like superfamily protein","protein_coding"
"Glyma.17G014100","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.17G014500","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.17G028600","No alias","Glycine max","Plant invertase/pectin methylesterase inhibitor superfamily","protein_coding"
"Glyma.17G054900","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.17G093933","No alias","Glycine max","Actin-binding FH2 (formin homology 2) family protein","protein_coding"
"Glyma.17G097800","No alias","Glycine max","aldehyde dehydrogenase 12A1","protein_coding"
"Glyma.17G124100","No alias","Glycine max","related to AP2 11","protein_coding"
"Glyma.17G136400","No alias","Glycine max","MATE efflux family protein","protein_coding"
"Glyma.17G145500","No alias","Glycine max","ubiquitin C-terminal hydrolase 3","protein_coding"
"Glyma.17G149800","No alias","Glycine max","novel plant snare 11","protein_coding"
"Glyma.17G172400","No alias","Glycine max","basic helix-loop-helix (bHLH) DNA-binding superfamily protein","protein_coding"
"Glyma.17G181950","No alias","Glycine max","Galactose oxidase/kelch repeat superfamily protein","protein_coding"
"Glyma.18G085500","No alias","Glycine max","PLC-like phosphodiesterase family protein","protein_coding"
"Glyma.18G116601","No alias","Glycine max","Disease resistance protein (TIR-NBS-LRR class) family","protein_coding"
"Glyma.18G133800","No alias","Glycine max","RNA-processing, Lsm domain","protein_coding"
"Glyma.18G190100","No alias","Glycine max","RHO guanyl-nucleotide exchange factor 7","protein_coding"
"Glyma.18G205700","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.18G216900","No alias","Glycine max","nuclear shuttle interacting","protein_coding"
"Glyma.18G297800","No alias","Glycine max","Flavodoxin family protein","protein_coding"
"Glyma.19G005000","No alias","Glycine max","Galactose oxidase/kelch repeat superfamily protein","protein_coding"
"Glyma.19G010600","No alias","Glycine max","Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding"
"Glyma.19G012700","No alias","Glycine max","Cellulose-synthase-like C4","protein_coding"
"Glyma.19G112600","No alias","Glycine max","Protein of unknown function (DUF1639)","protein_coding"
"Glyma.19G115900","No alias","Glycine max","Formyl transferase","protein_coding"
"Glyma.19G140600","No alias","Glycine max","polygalacturonase abscission zone A. thaliana","protein_coding"
"Glyma.19G221200","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.19G263400","No alias","Glycine max","ARM repeat superfamily protein","protein_coding"
"Glyma.20G008100","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.20G036300","No alias","Glycine max","Transmembrane amino acid transporter family protein","protein_coding"
"Glyma.20G044200","No alias","Glycine max","plectin-related","protein_coding"
"Glyma.20G094100","No alias","Glycine max","nodulin MtN21 /EamA-like transporter family protein","protein_coding"
"Glyma.20G111850","No alias","Glycine max","Function unknown","protein_coding"
"Glyma.20G204700","No alias","Glycine max","RNA polymerase Rpb7-like, N-terminal domain","protein_coding"
"Glyma.20G216600","No alias","Glycine max","Dof-type zinc finger DNA-binding family protein","protein_coding"
"Glyma.20G220600","No alias","Glycine max","plant U-box 9","protein_coding"
"GRMZM2G085827","No alias","Zea mays","4\'-phosphopantetheinyl transferase superfamily","protein_coding"
"GRMZM2G171605","No alias","Zea mays","4\'-phosphopantetheinyl transferase superfamily","protein_coding"
"HORVU0Hr1G002730.5","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G009980.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G012730.2","No alias","Hordeum vulgare","phosphopantetheinyl transferase *(mtPPT))","protein_coding"
"HORVU1Hr1G013780.1","No alias","Hordeum vulgare","component *(NRP-ABCDE10) of RNA polymerase complexes","protein_coding"
"HORVU1Hr1G036990.9","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G072400.1","No alias","Hordeum vulgare","RING-H2-class ATL-subclass E3 ubiquitin ligase","protein_coding"
"HORVU2Hr1G001360.1","No alias","Hordeum vulgare","tRNA dihydrouridine synthase","protein_coding"
"HORVU3Hr1G029790.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G060050.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G083020.4","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G089330.38","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G095890.1","No alias","Hordeum vulgare","E2 ubiquitin-conjugating enzyme *(UBC27)","protein_coding"
"HORVU5Hr1G028000.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G082770.2","No alias","Hordeum vulgare","regulatory protein *(XCT) of light-dependent circadian clock","protein_coding"
"HORVU5Hr1G112790.6","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G125290.3","No alias","Hordeum vulgare","MAPK-kinase protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"HORVU6Hr1G010440.4","No alias","Hordeum vulgare","glycosyl transferase *(SIA)","protein_coding"
"HORVU6Hr1G020320.5","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G041060.5","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G063250.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G063510.3","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G055620.12","No alias","Hordeum vulgare","Unknown function","protein_coding"
"Kfl00001_0250","kfl00001_0250_v1.1","Klebsormidium nitens","(at5g02820 : 578.0) Involved in the patterning and shape of leaf trichomes. Encodes the DNA topoisomerase VI SPO11-3, involved in endoreduplication; ROOT HAIRLESS 2 (RHL2); CONTAINS InterPro DOMAIN/s: Spo11/DNA topoisomerase VI, subunit A, N-terminal (InterPro:IPR013049), DNA topoisomerase VI, subunit A (InterPro:IPR004085), Spo11/DNA topoisomerase VI, subunit A (InterPro:IPR002815); BEST Arabidopsis thaliana protein match is: Spo11/DNA topoisomerase VI, subunit A protein (TAIR:AT3G13170.1); Has 936 Blast hits to 932 proteins in 314 species: Archae - 223; Bacteria - 16; Metazoa - 170; Fungi - 119; Plants - 152; Viruses - 0; Other Eukaryotes - 256 (source: NCBI BLink). & (reliability: 1156.0) &  (original description: no original description)","protein_coding"
"Kfl00007_0190","kfl00007_0190_v1.1","Klebsormidium nitens","(at1g80090 : 177.0) Cystathionine beta-synthase (CBS) family protein; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) protein (TAIR:AT1G15330.1); Has 517 Blast hits to 517 proteins in 144 species: Archae - 0; Bacteria - 47; Metazoa - 83; Fungi - 146; Plants - 195; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (reliability: 354.0) &  (original description: no original description)","protein_coding"
"Kfl00008_0030","kfl00008_0030_v1.1","Klebsormidium nitens","(at4g17070 : 278.0) peptidyl-prolyl cis-trans isomerases; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: response to oxidative stress; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130); Has 214 Blast hits to 208 proteins in 48 species: Archae - 0; Bacteria - 43; Metazoa - 9; Fungi - 0; Plants - 153; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 556.0) &  (original description: no original description)","protein_coding"
"Kfl00009_0220","kfl00009_0220_v1.1","Klebsormidium nitens","(at3g63340 : 237.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein serine/threonine phosphatase activity, protein kinase activity, catalytic activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein phosphatase 2C-related (InterPro:IPR001932), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Protein phosphatase 2C, N-terminal (InterPro:IPR014045), Protein phosphatase 2C (InterPro:IPR015655); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT3G63320.1). & (reliability: 474.0) &  (original description: no original description)","protein_coding"
"Kfl00013_0150","kfl00013_0150_v1.1","Klebsormidium nitens","(at1g76130 : 483.0) alpha-amylase, putative / 1,4-alpha-D-glucan glucanohydrolase, putative, strong similarity to alpha-amylase GI:7532799 from (Malus x domestica);contains Pfam profile PF00128: Alpha amylase, catalytic domain. Predicted to be secreted based on SignalP analysis.; alpha-amylase-like 2 (AMY2); FUNCTIONS IN: cation binding, catalytic activity, alpha-amylase activity, calcium ion binding; INVOLVED IN: carbohydrate metabolic process, glycogen catabolic process; LOCATED IN: extracellular region; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 13 (InterPro:IPR006046), Alpha-amylase, plant (InterPro:IPR013775), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047), Alpha-amylase, C-terminal beta-sheet (InterPro:IPR012850); BEST Arabidopsis thaliana protein match is: alpha-amylase-like 3 (TAIR:AT1G69830.1); Has 2455 Blast hits to 2450 proteins in 882 species: Archae - 39; Bacteria - 1348; Metazoa - 171; Fungi - 337; Plants - 494; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). & (p04063|amy2_horvu : 376.0) Alpha-amylase type B isozyme precursor (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase) (AMY2-2) (High pI alpha-amylase) - Hordeum vulgare (Barley) & (reliability: 966.0) &  (original description: no original description)","protein_coding"
"Kfl00015_0410","kfl00015_0410_v1.1","Klebsormidium nitens","(at5g36880 : 986.0) Encodes a plastidic acetyl-coA synthetase. This enzyme plays a role in converting acetate to acetyl-coA in the plastids. It does not appear to be a major contributor to  fatty acid biosynthesis based on mutant phenotypes. The enzyme seems to act as a monomer and may play an important role  in preventing the toxic accumulation of fermentation products including acetaldehyde, acetate, and ethanol. It participates in  the pyruvate dehydrogenase bypass pathway; acetyl-CoA synthetase (ACS); FUNCTIONS IN: acetate-CoA ligase activity; INVOLVED IN: metabolic process, acetate metabolic process; LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acetate--CoA ligase (InterPro:IPR011904), AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl-activating enzyme 17 (TAIR:AT5G23050.1); Has 68981 Blast hits to 63577 proteins in 3326 species: Archae - 1100; Bacteria - 43606; Metazoa - 2469; Fungi - 2489; Plants - 1499; Viruses - 1; Other Eukaryotes - 17817 (source: NCBI BLink). & (q42982|4cl2_orysa : 112.0) 4-coumarate--CoA ligase 2 (EC 6.2.1.12) (4CL 2) (4-coumaroyl-CoA synthase 2) - Oryza sativa (Rice) & (reliability: 1972.0) &  (original description: no original description)","protein_coding"
"Kfl00018_0340","kfl00018_0340_v1.1","Klebsormidium nitens","(at2g47300 : 114.0) ribonuclease Ps; FUNCTIONS IN: ribonuclease P activity; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, sperm cell, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: POPLD (InterPro:IPR012590); Has 176 Blast hits to 168 proteins in 87 species: Archae - 0; Bacteria - 0; Metazoa - 58; Fungi - 69; Plants - 36; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). & (reliability: 228.0) &  (original description: no original description)","protein_coding"
"Kfl00019_0580","kfl00019_0580_v1.1","Klebsormidium nitens","(at1g02145 : 350.0) homolog of asparagine-linked glycosylation 12 (ALG12); FUNCTIONS IN: alpha-1,6-mannosyltransferase activity; INVOLVED IN: ER-associated protein catabolic process, protein amino acid terminal N-glycosylation; LOCATED IN: intrinsic to endoplasmic reticulum membrane; CONTAINS InterPro DOMAIN/s: Alg9-like mannosyltransferase (InterPro:IPR005599); BEST Arabidopsis thaliana protein match is: Alg9-like mannosyltransferase family (TAIR:AT1G16900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 700.0) &  (original description: no original description)","protein_coding"
"Kfl00020_0350","kfl00020_0350_v1.1","Klebsormidium nitens","(at1g71120 : 149.0) Contains lipase signature motif and GDSL domain.; GDSL-motif lipase/hydrolase 6 (GLIP6); FUNCTIONS IN: lipase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-motif lipase 7 (TAIR:AT5G15720.1); Has 3560 Blast hits to 3519 proteins in 249 species: Archae - 0; Bacteria - 402; Metazoa - 0; Fungi - 22; Plants - 3125; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (q7y1x1|est_hevbr : 101.0) Esterase precursor (EC 3.1.1.-) (Early nodule-specific protein homolog) (Latex allergen Hev b 13) - Hevea brasiliensis (Para rubber tree) & (reliability: 298.0) &  (original description: no original description)","protein_coding"
"Kfl00028_0270","kfl00028_0270_v1.1","Klebsormidium nitens","(at5g06680 : 712.0) Encodes protein similar to yeast SCP98. Yeast SCP98 is essential for the microtubule nucleation activity of the gamma-tubulin ring complexes.; spindle pole body component 98 (SPC98); CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259), Gamma tubulin complex protein 3 (InterPro:IPR015697); BEST Arabidopsis thaliana protein match is: Spc97 / Spc98 family of spindle pole body (SBP) component (TAIR:AT5G17410.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1424.0) &  (original description: no original description)","protein_coding"
"Kfl00028_0470","kfl00028_0470_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00029_0290","kfl00029_0290_v1.1","Klebsormidium nitens","(at1g12640 : 226.0) MBOAT (membrane bound O-acyl transferase) family protein; FUNCTIONS IN: acyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Membrane bound O-acyl transferase, MBOAT (InterPro:IPR004299); BEST Arabidopsis thaliana protein match is: MBOAT (membrane bound O-acyl transferase) family protein (TAIR:AT1G63050.1); Has 1204 Blast hits to 1199 proteins in 313 species: Archae - 0; Bacteria - 269; Metazoa - 625; Fungi - 142; Plants - 47; Viruses - 0; Other Eukaryotes - 121 (source: NCBI BLink). & (reliability: 452.0) &  (original description: no original description)","protein_coding"
"Kfl00029_0510","kfl00029_0510_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00032_0190","kfl00032_0190_v1.1","Klebsormidium nitens","(at2g39780 : 134.0) S-like ribonuclease; ribonuclease 2 (RNS2); FUNCTIONS IN: ribonuclease T2 activity, endoribonuclease activity, RNA binding; INVOLVED IN: aging; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease T2 (InterPro:IPR001568), Ribonuclease T2, active site (InterPro:IPR018188); BEST Arabidopsis thaliana protein match is: Ribonuclease T2 family protein (TAIR:AT1G14220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p83618|rn28_pangi : 105.0) Ribonuclease-like storage protein precursor (Root 28 kDa major protein) - Panax ginseng (Korean ginseng) & (reliability: 268.0) &  (original description: no original description)","protein_coding"
"Kfl00032_0310","kfl00032_0310_v1.1","Klebsormidium nitens","(at5g58020 : 89.0) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF602 (InterPro:IPR006735); Has 385 Blast hits to 385 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 153; Fungi - 117; Plants - 50; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). & (reliability: 178.0) &  (original description: no original description)","protein_coding"
"Kfl00037_0200","kfl00037_0200_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00047_0220","kfl00047_0220_v1.1","Klebsormidium nitens","(at2g28100 : 409.0) Encodes a protein with &#945;-fucosidase activity. The activity was assessed on 2'-fucosyl-lactitol. AtFUC1 was not able to act on XXFG substrates, at least when heterologously expressed in <i>Pichia pastoris</i>. The enzyme has been postulated to act on fucosylated substrates other than xyloglucan oligosaccharides.  was shown (<i>Pichia pastoris</i>) to hydrolyze fucose in 3- and 4-linkage , hence was characterized as alpha-L-3,4-fucosidase; alpha-L-fucosidase 1 (FUC1); FUNCTIONS IN: alpha-L-fucosidase activity; INVOLVED IN: glycoprotein catabolic process; LOCATED IN: vacuole; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 29 (InterPro:IPR000933), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); Has 2006 Blast hits to 1993 proteins in 389 species: Archae - 18; Bacteria - 1470; Metazoa - 203; Fungi - 6; Plants - 70; Viruses - 0; Other Eukaryotes - 239 (source: NCBI BLink). & (q7xur3|fuco1_orysa : 392.0) Putative alpha-L-fucosidase 1 precursor (EC 3.2.1.51) (Alpha-L-fucoside fucohydrolase) - Oryza sativa (Rice) & (reliability: 818.0) &  (original description: no original description)","protein_coding"
"Kfl00054_0150","kfl00054_0150_v1.1","Klebsormidium nitens","(at4g32060 : 300.0) calcium-binding EF hand family protein; FUNCTIONS IN: calcium ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); Has 1096 Blast hits to 1078 proteins in 164 species: Archae - 0; Bacteria - 0; Metazoa - 829; Fungi - 82; Plants - 97; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink). & (reliability: 600.0) &  (original description: no original description)","protein_coding"
"Kfl00073_0250","kfl00073_0250_v1.1","Klebsormidium nitens","(at5g42850 : 93.2) Thioredoxin superfamily protein; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Protein of unknown function DUF953, thioredoxin-like (InterPro:IPR010357); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 186.4) &  (original description: no original description)","protein_coding"
"Kfl00074_0040","kfl00074_0040_v1.1","Klebsormidium nitens","(at3g09660 : 715.0) minichromosome maintenance 8 (MCM8); FUNCTIONS IN: nucleoside-triphosphatase activity, DNA-dependent ATPase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: DNA-dependent DNA replication initiation, DNA replication; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), ATPase, AAA+ type, core (InterPro:IPR003593), DNA-dependent ATPase MCM (InterPro:IPR001208); BEST Arabidopsis thaliana protein match is: Minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT2G16440.1); Has 4027 Blast hits to 3851 proteins in 539 species: Archae - 371; Bacteria - 134; Metazoa - 1249; Fungi - 930; Plants - 423; Viruses - 3; Other Eukaryotes - 917 (source: NCBI BLink). & (q43704|mcm3_maize : 243.0) DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment) - Zea mays (Maize) & (reliability: 1430.0) &  (original description: no original description)","protein_coding"
"Kfl00077_0190","kfl00077_0190_v1.1","Klebsormidium nitens","(at3g15160 : 213.0) unknown protein; Has 266 Blast hits to 264 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 58; Fungi - 0; Plants - 199; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 426.0) &  (original description: no original description)","protein_coding"
"Kfl00079_0010","kfl00079_0010_v1.1","Klebsormidium nitens","(o63066|secy_maize : 488.0) Preprotein translocase secY subunit, chloroplast precursor (CpSecY) - Zea mays (Maize) & (at2g18710 : 482.0) Encodes a component of the thylakoid-localized Sec system involved in the translocation of cytoplasmic proteins into plastid.; SECY homolog 1 (SCY1); FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein secretion, protein transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SecY protein (InterPro:IPR002208); BEST Arabidopsis thaliana protein match is: SecY protein transport family protein (TAIR:AT2G31530.1); Has 9180 Blast hits to 9165 proteins in 2700 species: Archae - 72; Bacteria - 5385; Metazoa - 19; Fungi - 2; Plants - 102; Viruses - 0; Other Eukaryotes - 3600 (source: NCBI BLink). & (reliability: 964.0) &  (original description: no original description)","protein_coding"
"Kfl00079_0040","kfl00079_0040_v1.1","Klebsormidium nitens","(at1g78930 : 102.0) Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT2G21710.1); Has 1485 Blast hits to 916 proteins in 85 species: Archae - 0; Bacteria - 0; Metazoa - 111; Fungi - 0; Plants - 1282; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). & (reliability: 204.0) &  (original description: no original description)","protein_coding"
"Kfl00086_0280","kfl00086_0280_v1.1","Klebsormidium nitens","(at4g19880 : 233.0) Glutathione S-transferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutathione S-transferase, predicted (InterPro:IPR016639), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutathione S-transferase family protein (TAIR:AT5G45020.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 466.0) &  (original description: no original description)","protein_coding"
"Kfl00100_0060","kfl00100_0060_v1.1","Klebsormidium nitens","(at2g44640 : 151.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, plasma membrane, plastid, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3769 (InterPro:IPR022244); BEST Arabidopsis thaliana protein match is: pigment defective 320 (TAIR:AT3G06960.1); Has 49 Blast hits to 48 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (reliability: 302.0) &  (original description: no original description)","protein_coding"
"Kfl00111_0210","kfl00111_0210_v1.1","Klebsormidium nitens","(at5g63610 : 512.0) significant sequence similarity to plant and animal cyclin-dependent protein kinases, and was classified as an E-type CDK with a SPTAIRE cyclin binding motif in the kinase domain.; cyclin-dependent kinase E;1 (CDKE;1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G67580.2); Has 122304 Blast hits to 120929 proteins in 4501 species: Archae - 96; Bacteria - 13482; Metazoa - 46432; Fungi - 12531; Plants - 29277; Viruses - 477; Other Eukaryotes - 20009 (source: NCBI BLink). & (p23111|cdc2_maize : 242.0) Cell division control protein 2 homolog (EC 2.7.11.22) (EC 2.7.11.23) (p34cdc2) - Zea mays (Maize) & (reliability: 1024.0) &  (original description: no original description)","protein_coding"
"Kfl00113_0290","kfl00113_0290_v1.1","Klebsormidium nitens","(at5g22940 : 241.0) Homolog of FRA8 (AT2G28110), a member of a member of glycosyltransferase family 47; exhibits high sequence similarity to tobacco (Nicotiana plumbaginifolia) pectin glucuronyltransferase.; FRA8 homolog (F8H); CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT2G28110.1); Has 1434 Blast hits to 1412 proteins in 109 species: Archae - 0; Bacteria - 10; Metazoa - 314; Fungi - 4; Plants - 998; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). & (reliability: 482.0) &  (original description: no original description)","protein_coding"
"Kfl00117_0110","kfl00117_0110_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00122_0160","kfl00122_0160_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00124_0060","kfl00124_0060_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00127_0030","kfl00127_0030_v1.1","Klebsormidium nitens","(at2g29260 : 106.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G06060.1); Has 125944 Blast hits to 125708 proteins in 3633 species: Archae - 994; Bacteria - 82126; Metazoa - 5739; Fungi - 6481; Plants - 2838; Viruses - 5; Other Eukaryotes - 27761 (source: NCBI BLink). & (q949m2|fabg4_brana : 86.7) 3-oxoacyl-[acyl-carrier-protein] reductase 4 (EC 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase 4) (Fragment) - Brassica napus (Rape) & (reliability: 212.0) &  (original description: no original description)","protein_coding"
"Kfl00136_0130","kfl00136_0130_v1.1","Klebsormidium nitens","(o24164|ppom_tobac : 388.0) Protoporphyrinogen oxidase, mitochondrial (EC 1.3.3.4) (PPO II) (Protoporphyrinogen IX oxidase isozyme II) (PPX II) (PX-2) - Nicotiana tabacum (Common tobacco) & (at5g14220 : 383.0) Encodes PPO2, a putative protoporphyrinogen oxidase based on sequence homology.  Also known as MEE61 (maternal effect embryo arrest 61).  mee61 mutant shows arrested endosperm development.; HEMG2; FUNCTIONS IN: oxygen-dependent protoporphyrinogen oxidase activity; INVOLVED IN: porphyrin biosynthetic process, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Adrenodoxin reductase (InterPro:IPR000759), Protoporphyrinogen oxidase (InterPro:IPR004572); BEST Arabidopsis thaliana protein match is: Flavin containing amine oxidoreductase family (TAIR:AT4G01690.1). & (reliability: 766.0) &  (original description: no original description)","protein_coding"
"Kfl00139_0090","kfl00139_0090_v1.1","Klebsormidium nitens","(at2g17510 : 446.0) EMBRYO DEFECTIVE 2763 (EMB2763); FUNCTIONS IN: ribonuclease activity, RNA binding; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleotide binding protein, PINc (InterPro:IPR006596), Ribonuclease II/R (InterPro:IPR001900); BEST Arabidopsis thaliana protein match is: Ribonuclease II/R family protein (TAIR:AT1G77680.1). & (reliability: 892.0) &  (original description: no original description)","protein_coding"
"Kfl00140_0130","kfl00140_0130_v1.1","Klebsormidium nitens","(at5g08710 : 261.0) Regulator of chromosome condensation (RCC1) family protein; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family protein (TAIR:AT5G63860.1); Has 22297 Blast hits to 6326 proteins in 481 species: Archae - 85; Bacteria - 2816; Metazoa - 7462; Fungi - 1554; Plants - 2765; Viruses - 0; Other Eukaryotes - 7615 (source: NCBI BLink). & (reliability: 522.0) &  (original description: no original description)","protein_coding"
"Kfl00144_0280","kfl00144_0280_v1.1","Klebsormidium nitens","(at1g69020 : 426.0) Prolyl oligopeptidase family protein; FUNCTIONS IN: serine-type peptidase activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375), Peptidase S9A, oligopeptidase, N-terminal beta-propeller (InterPro:IPR004106), Peptidase S9A, prolyl oligopeptidase (InterPro:IPR002470); BEST Arabidopsis thaliana protein match is: Prolyl oligopeptidase family protein (TAIR:AT5G66960.1); Has 6703 Blast hits to 6563 proteins in 1132 species: Archae - 51; Bacteria - 2817; Metazoa - 295; Fungi - 25; Plants - 196; Viruses - 0; Other Eukaryotes - 3319 (source: NCBI BLink). & (reliability: 852.0) &  (original description: no original description)","protein_coding"
"Kfl00147_0015","kfl00147_0015_v1.1","Klebsormidium nitens","(at1g78610 : 185.0) mechanosensitive channel of small conductance-like 6 (MSL6); INVOLVED IN: transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Membrane protein, At2g17000, predicted (InterPro:IPR016688), Mechanosensitive ion channel MscS (InterPro:IPR006685), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: mechanosensitive channel of small conductance-like 4 (TAIR:AT1G53470.1); Has 3617 Blast hits to 3602 proteins in 1077 species: Archae - 172; Bacteria - 2574; Metazoa - 1; Fungi - 205; Plants - 217; Viruses - 0; Other Eukaryotes - 448 (source: NCBI BLink). & (reliability: 370.0) &  (original description: no original description)","protein_coding"
"Kfl00168_0100","kfl00168_0100_v1.1","Klebsormidium nitens","(at3g48150 : 620.0) anaphase-promoting complex or cyclosome subunit; anaphase-promoting complex subunit 8 (APC8); FUNCTIONS IN: binding; INVOLVED IN: cell cycle, regulation of mitotic metaphase/anaphase transition; LOCATED IN: anaphase-promoting complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Cdc23 (InterPro:IPR007192), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G16320.1); Has 14789 Blast hits to 8989 proteins in 1164 species: Archae - 889; Bacteria - 6197; Metazoa - 2204; Fungi - 825; Plants - 603; Viruses - 0; Other Eukaryotes - 4071 (source: NCBI BLink). & (reliability: 1240.0) &  (original description: no original description)","protein_coding"
"Kfl00176_0020","kfl00176_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00177_0190","kfl00177_0190_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00197_0160","kfl00197_0160_v1.1","Klebsormidium nitens","(at1g75340 : 130.0) Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571). & (reliability: 260.0) &  (original description: no original description)","protein_coding"
"Kfl00198_0110","kfl00198_0110_v1.1","Klebsormidium nitens","(at1g17850 : 378.0) Rhodanese/Cell cycle control phosphatase superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT2G40760.1). & (reliability: 756.0) &  (original description: no original description)","protein_coding"
"Kfl00206_0030","kfl00206_0030_v1.1","Klebsormidium nitens","(at5g65750 : 728.0) 2-oxoglutarate dehydrogenase, E1 component; FUNCTIONS IN: oxoglutarate dehydrogenase (succinyl-transferring) activity, cobalt ion binding, zinc ion binding; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxoglutarate dehydrogenase, E1 component (InterPro:IPR011603), Dehydrogenase, E1 component (InterPro:IPR001017), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate dehydrogenase, E1 component (TAIR:AT3G55410.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1456.0) &  (original description: no original description)","protein_coding"
"Kfl00207_0125","kfl00207_0125_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00212_0020","kfl00212_0020_v1.1","Klebsormidium nitens","(at1g21650 : 746.0) Encodes a component of the thylakoid-localized Sec system involved in the translocation of cytoplasmic proteins into plastid.  Loss-of-function mutations result in arrest at the globular stage and embryo lethality.; Preprotein translocase SecA family protein; FUNCTIONS IN: ATPase activity, zinc ion binding, P-P-bond-hydrolysis-driven protein transmembrane transporter activity, ATP binding; INVOLVED IN: intracellular protein transport, protein targeting, protein transport by the Sec complex, protein import; LOCATED IN: internal side of plasma membrane, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Zinc finger, RING-type (InterPro:IPR001841), SecA, preprotein translocase (InterPro:IPR022491), WD40 repeat (InterPro:IPR001680), SecA motor DEAD (InterPro:IPR014018), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), SecA Wing/Scaffold (InterPro:IPR011116), WD40-repeat-containing domain (InterPro:IPR017986), SecA preprotein, cross-linking domain (InterPro:IPR011130), SecA DEAD-like (InterPro:IPR011115), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), SecA conserved site (InterPro:IPR020937), WD40 repeat, subgroup (InterPro:IPR019781), SecA protein (InterPro:IPR000185); BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT1G21651.1). & (q41062|seca_pea : 557.0) Preprotein translocase secA subunit, chloroplast precursor - Pisum sativum (Garden pea) & (reliability: 1492.0) &  (original description: no original description)","protein_coding"
"Kfl00225_0040","kfl00225_0040_v1.1","Klebsormidium nitens","(at5g52810 : 214.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: structural constituent of eye lens, binding, catalytic activity; INVOLVED IN: arginine catabolic process to glutamate, nopaline catabolic process, metabolic process, octopine catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Ornithine cyclodeaminase/mu-crystallin (InterPro:IPR003462); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 428.0) &  (original description: no original description)","protein_coding"
"Kfl00230_0080","kfl00230_0080_v1.1","Klebsormidium nitens","(q9sbn4|pgkh_volca : 240.0) Phosphoglycerate kinase, chloroplast precursor (EC 2.7.2.3) - Volvox carteri & (at3g12780 : 228.0) nuclear phosphoglycerate kinase (PGK1); phosphoglycerate kinase 1 (PGK1); FUNCTIONS IN: phosphoglycerate kinase activity; INVOLVED IN: response to cadmium ion, response to cold, glycolysis, peptidyl-cysteine S-nitrosylation; LOCATED IN: in 11 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglycerate kinase, N-terminal (InterPro:IPR015824), Phosphoglycerate kinase (InterPro:IPR001576), Phosphoglycerate kinase, C-terminal (InterPro:IPR015901), Phosphoglycerate kinase, conserved site (InterPro:IPR015911); BEST Arabidopsis thaliana protein match is: Phosphoglycerate kinase family protein (TAIR:AT1G56190.1); Has 10843 Blast hits to 10817 proteins in 3010 species: Archae - 254; Bacteria - 5217; Metazoa - 451; Fungi - 193; Plants - 515; Viruses - 0; Other Eukaryotes - 4213 (source: NCBI BLink). & (reliability: 452.0) &  (original description: no original description)","protein_coding"
"Kfl00241_0070","kfl00241_0070_v1.1","Klebsormidium nitens","(at2g31740 : 397.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G04610.1); Has 1970 Blast hits to 1936 proteins in 487 species: Archae - 34; Bacteria - 737; Metazoa - 349; Fungi - 54; Plants - 234; Viruses - 0; Other Eukaryotes - 562 (source: NCBI BLink). & (reliability: 794.0) &  (original description: no original description)","protein_coding"
"Kfl00255_0140","kfl00255_0140_v1.1","Klebsormidium nitens","(at1g04945 : 159.0) HIT-type Zinc finger family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein ycf60 (InterPro:IPR019109), Zinc finger, HIT-type (InterPro:IPR007529); BEST Arabidopsis thaliana protein match is: translocon at the inner envelope membrane of chloroplasts 20 (TAIR:AT1G04940.1). & (reliability: 318.0) &  (original description: no original description)","protein_coding"
"Kfl00261_0030","kfl00261_0030_v1.1","Klebsormidium nitens","(at4g32850 : 625.0) Encodes a nuclear poly(A) polymerase. Located in the nucleus.; nuclear poly(a) polymerase (nPAP); CONTAINS InterPro DOMAIN/s: Poly(A) polymerase (InterPro:IPR014492), Nucleotidyltransferase, class I, C-terminal-like (InterPro:IPR011068), Poly(A) polymerase, central domain (InterPro:IPR007012), Nucleotidyl transferase domain (InterPro:IPR002934), Poly(A) polymerase, RNA-binding domain (InterPro:IPR007010); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1250.0) &  (original description: no original description)","protein_coding"
"Kfl00264_0230","kfl00264_0230_v1.1","Klebsormidium nitens","(at4g37900 : 230.0) Protein of unknown function (duplicated DUF1399); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1399 (InterPro:IPR009836); BEST Arabidopsis thaliana protein match is: Protein of unknown function (duplicated DUF1399) (TAIR:AT2G22660.2); Has 24258 Blast hits to 6156 proteins in 640 species: Archae - 4; Bacteria - 13513; Metazoa - 5207; Fungi - 694; Plants - 2964; Viruses - 274; Other Eukaryotes - 1602 (source: NCBI BLink). & (reliability: 460.0) &  (original description: no original description)","protein_coding"
"Kfl00284_0030","kfl00284_0030_v1.1","Klebsormidium nitens","(p05414|gox_spiol : 420.0) Peroxisomal (S)-2-hydroxy-acid oxidase (EC 1.1.3.15) (Glycolate oxidase) (GOX) (Short chain alpha-hydroxy acid oxidase) - Spinacia oleracea (Spinach) & (at4g18360 : 414.0) Aldolase-type TIM barrel family protein; FUNCTIONS IN: glycolate oxidase activity, oxidoreductase activity, FMN binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), FMN-dependent alpha-hydroxy acid dehydrogenase, active site (InterPro:IPR008259), FMN-dependent dehydrogenase (InterPro:IPR000262), Alpha-hydroxy acid dehydrogenase, FMN-dependent (InterPro:IPR012133); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT3G14420.2); Has 9948 Blast hits to 9918 proteins in 1541 species: Archae - 28; Bacteria - 4496; Metazoa - 367; Fungi - 686; Plants - 255; Viruses - 0; Other Eukaryotes - 4116 (source: NCBI BLink). & (reliability: 828.0) &  (original description: no original description)","protein_coding"
"Kfl00285_0180","kfl00285_0180_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00302_0150","kfl00302_0150_v1.1","Klebsormidium nitens","(at5g48930 : 87.8) At5g48930 has been shown to encode for the hydroxycinnamoyl-Coenzyme A shikimate/quinate hydroxycinnamoyltransferase (HCT) both synthesizing and catabolizing the hydroxycinnamoylesters (coumaroyl/caffeoyl shikimate and quinate) involved in the phenylpropanoid pathway.  Influence on the accumulation of flavonoids which in turn inhibit auxin transport and reduce plant growth.; hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase (HCT); CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G57840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 175.6) &  (original description: no original description)","protein_coding"
"Kfl00308_0050","kfl00308_0050_v1.1","Klebsormidium nitens","(at4g16310 : 80.1) LSD1-like 3 (LDL3); FUNCTIONS IN: primary amine oxidase activity; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Adrenodoxin reductase (InterPro:IPR000759), SWIRM (InterPro:IPR007526); BEST Arabidopsis thaliana protein match is: Flavin containing amine oxidoreductase family protein (TAIR:AT3G10390.1); Has 1823 Blast hits to 1718 proteins in 423 species: Archae - 23; Bacteria - 1184; Metazoa - 118; Fungi - 119; Plants - 329; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). & (reliability: 160.2) &  (original description: no original description)","protein_coding"
"Kfl00309_0020","kfl00309_0020_v1.1","Klebsormidium nitens","(at5g19680 : 294.0) Leucine-rich repeat (LRR) family protein; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT5G22320.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 588.0) &  (original description: no original description)","protein_coding"
"Kfl00323_0030","kfl00323_0030_v1.1","Klebsormidium nitens","(at5g48440 : 193.0) FAD-dependent oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity; LOCATED IN: chloroplast; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: FAD dependent oxidoreductase (InterPro:IPR006076); Has 4216 Blast hits to 4216 proteins in 1050 species: Archae - 57; Bacteria - 3005; Metazoa - 218; Fungi - 66; Plants - 52; Viruses - 0; Other Eukaryotes - 818 (source: NCBI BLink). & (reliability: 386.0) &  (original description: no original description)","protein_coding"
"Kfl00356_0060","kfl00356_0060_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00358_0030","kfl00358_0030_v1.1","Klebsormidium nitens","(at5g62530 : 682.0) Encodes mitochondrial Delta-pyrroline-5-  carboxylate dehydrogenase. Involved in the catabolism of proline to glutamate. Involved in protection from proline toxicity. Induced at pathogen infection sites. P5CDH and SRO5 (an overlapping gene in the sense orientation) generate 24-nt and 21-nt siRNAs, which together are components of a regulatory loop controlling reactive oxygen species (ROS) production and stress response.; aldehyde dehydrogenase 12A1 (ALDH12A1); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, cobalt ion binding, zinc ion binding, 1-pyrroline-5-carboxylate dehydrogenase activity; INVOLVED IN: oxygen and reactive oxygen species metabolic process, response to salt stress, proline catabolic process to glutamate, proline metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 7B4 (TAIR:AT1G54100.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1364.0) &  (original description: no original description)","protein_coding"
"Kfl00377_0060","kfl00377_0060_v1.1","Klebsormidium nitens","(p48981|bgal_maldo : 733.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid beta-galactosidase) (Exo-(1-->4)-beta-D-galactanase) - Malus domestica (Apple) (Malus sylvestris) & (at2g32810 : 723.0) putative beta-galactosidase; beta galactosidase 9 (BGAL9); FUNCTIONS IN: cation binding, sugar binding, beta-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 8 (TAIR:AT2G28470.1). & (reliability: 1446.0) &  (original description: no original description)","protein_coding"
"Kfl00396_0090","kfl00396_0090_v1.1","Klebsormidium nitens","(at4g39650 : 116.0) The gene encodes a gamma-glutamyltransferase (AKA gamma-glutamyl transpeptidase, EC 2.3.2.2) that is located in the apoplast of young siliques (within the ovules of the carpel) and is involved in the degradation of glutathione. The encoded enzyme also acts as part of a GSH pumping gamma-glutamyl cycle in this tissue and may also be involved in gamma-glutamyl amino acid formation.; gamma-glutamyl transpeptidase 2 (GGT2); CONTAINS InterPro DOMAIN/s: Gamma-glutamyltranspeptidase (InterPro:IPR000101); BEST Arabidopsis thaliana protein match is: gamma-glutamyl transpeptidase 1 (TAIR:AT4G39640.2); Has 9214 Blast hits to 9192 proteins in 1483 species: Archae - 86; Bacteria - 4248; Metazoa - 714; Fungi - 303; Plants - 110; Viruses - 1; Other Eukaryotes - 3752 (source: NCBI BLink). & (reliability: 232.0) &  (original description: no original description)","protein_coding"
"Kfl00403_0080","kfl00403_0080_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00409_0050","kfl00409_0050_v1.1","Klebsormidium nitens","(at1g01710 : 273.0) Acyl-CoA thioesterase family protein; FUNCTIONS IN: cyclic nucleotide binding, acyl-CoA thioesterase activity; INVOLVED IN: acyl-CoA metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Cyclic nucleotide-binding-like (InterPro:IPR018490), Acyl-CoA thioesterase (InterPro:IPR003703), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: Acyl-CoA thioesterase family protein (TAIR:AT4G00520.2); Has 3628 Blast hits to 3595 proteins in 999 species: Archae - 0; Bacteria - 1940; Metazoa - 444; Fungi - 348; Plants - 71; Viruses - 0; Other Eukaryotes - 825 (source: NCBI BLink). & (reliability: 546.0) &  (original description: no original description)","protein_coding"
"Kfl00412_0070","kfl00412_0070_v1.1","Klebsormidium nitens","(at2g01480 : 430.0) O-fucosyltransferase family protein; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G14970.1); Has 836 Blast hits to 825 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 836; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 852.0) &  (original description: no original description)","protein_coding"
"Kfl00425_0020","kfl00425_0020_v1.1","Klebsormidium nitens","(at3g58800 : 100.0) unknown protein; Has 75 Blast hits to 75 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 17; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 200.0) &  (original description: no original description)","protein_coding"
"Kfl00448_0030","kfl00448_0030_v1.1","Klebsormidium nitens","(at5g04480 : 205.0) UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biosynthetic process; LOCATED IN: Golgi apparatus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: glycosyl transferase family 1 protein (TAIR:AT4G01210.1). & (reliability: 404.0) &  (original description: no original description)","protein_coding"
"Kfl00456_0050","kfl00456_0050_v1.1","Klebsormidium nitens","(at4g00090 : 375.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: periodic tryptophan protein 2 (TAIR:AT1G15440.2); Has 19942 Blast hits to 11235 proteins in 520 species: Archae - 42; Bacteria - 5638; Metazoa - 5982; Fungi - 4099; Plants - 1742; Viruses - 0; Other Eukaryotes - 2439 (source: NCBI BLink). & (reliability: 750.0) &  (original description: no original description)","protein_coding"
"Kfl00481_0070","kfl00481_0070_v1.1","Klebsormidium nitens","(at3g09580 : 394.0) FAD/NAD(P)-binding oxidoreductase family protein; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937); BEST Arabidopsis thaliana protein match is: Flavin containing amine oxidoreductase family (TAIR:AT5G14220.1); Has 2908 Blast hits to 2906 proteins in 704 species: Archae - 36; Bacteria - 1433; Metazoa - 261; Fungi - 51; Plants - 352; Viruses - 0; Other Eukaryotes - 775 (source: NCBI BLink). & (reliability: 788.0) &  (original description: no original description)","protein_coding"
"Kfl00513_0100","kfl00513_0100_v1.1","Klebsormidium nitens","(at1g26370 : 699.0) RNA helicase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), ATPase, AAA+ type, core (InterPro:IPR003593), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, putative (TAIR:AT3G26560.1); Has 9899 Blast hits to 9180 proteins in 1561 species: Archae - 2; Bacteria - 3369; Metazoa - 2309; Fungi - 1230; Plants - 848; Viruses - 465; Other Eukaryotes - 1676 (source: NCBI BLink). & (reliability: 1398.0) &  (original description: no original description)","protein_coding"
"Kfl00515_0110","kfl00515_0110_v1.1","Klebsormidium nitens","(at5g64520 : 130.0) Encodes a protein of the XRCC2 family involved in DNA repair. atxrcc2-1 Mutants are sensitive to MitomycinC but do not show fertility defects.; homolog of X-ray repair cross complementing 2 (XRCC2) (XRCC2); Has 186 Blast hits to 186 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 99; Fungi - 44; Plants - 31; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). & (reliability: 260.0) &  (original description: no original description)","protein_coding"
"Kfl00550_0040","kfl00550_0040_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00553_0010","kfl00553_0010_v1.1","Klebsormidium nitens","(at2g17820 : 247.0) Encodes a member of the histidine kinase family.; histidine kinase 1 (HK1); FUNCTIONS IN: osmosensor activity, protein histidine kinase activity, histidine phosphotransfer kinase activity; INVOLVED IN: response to water deprivation, seed maturation, response to osmotic stress; LOCATED IN: membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: Signal transduction histidine kinase (TAIR:AT2G47430.1); Has 149976 Blast hits to 132540 proteins in 3044 species: Archae - 792; Bacteria - 133304; Metazoa - 35; Fungi - 2288; Plants - 2106; Viruses - 27; Other Eukaryotes - 11424 (source: NCBI BLink). & (reliability: 494.0) &  (original description: no original description)","protein_coding"
"Kfl00563_0050","kfl00563_0050_v1.1","Klebsormidium nitens","(at1g08980 : 242.0) Encodes an enzyme with similarity to bacterial acylamidohydrolases and exhibits indole-3-acetamide amidohydrolase activity in vitro.  This enzyme may be involved in the in vivo biosynthesis of indole-acetic acid from indole-3-acetamide, a native metabolite of A. thaliana. It appears to exist as a monomer.; amidase 1 (AMI1); FUNCTIONS IN: amidase activity, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, indoleacetamide hydrolase activity; INVOLVED IN: indoleacetic acid biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amidase, conserved site (InterPro:IPR020556), Amidase (InterPro:IPR000120); BEST Arabidopsis thaliana protein match is: translocon at the outer membrane of chloroplasts 64-V (TAIR:AT5G09420.1); Has 18462 Blast hits to 18443 proteins in 2488 species: Archae - 262; Bacteria - 10888; Metazoa - 543; Fungi - 1390; Plants - 376; Viruses - 0; Other Eukaryotes - 5003 (source: NCBI BLink). & (reliability: 444.0) &  (original description: no original description)","protein_coding"
"Kfl00564_0010","kfl00564_0010_v1.1","Klebsormidium nitens","(q5nbj3|gyrb_orysa : 787.0) DNA gyrase subunit B, chloroplast/mitochondrial precursor (EC 5.99.1.3) - Oryza sativa (Rice) & (at5g04130 : 781.0) DNA GYRASE B2; FUNCTIONS IN: DNA topoisomerase activity, DNA topoisomerase (ATP-hydrolyzing) activity, DNA binding, ATP binding; INVOLVED IN: DNA topological change, DNA metabolic process; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), DNA topoisomerase, type IIA, subunit B, domain 2 (InterPro:IPR013506), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), ATPase-like, ATP-binding domain (InterPro:IPR003594), DNA topoisomerase, type IIA, subunit B (InterPro:IPR000565), DNA topoisomerase, type IIA, subunit B/N-terminal (InterPro:IPR001241); BEST Arabidopsis thaliana protein match is: DNA GYRASE B1 (TAIR:AT3G10270.1); Has 25944 Blast hits to 25881 proteins in 6578 species: Archae - 105; Bacteria - 19082; Metazoa - 171; Fungi - 228; Plants - 112; Viruses - 77; Other Eukaryotes - 6169 (source: NCBI BLink). & (reliability: 1532.0) &  (original description: no original description)","protein_coding"
"Kfl00564_0020","kfl00564_0020_v1.1","Klebsormidium nitens","(at1g60890 : 89.0) Phosphatidylinositol-4-phosphate 5-kinase family protein; FUNCTIONS IN: 1-phosphatidylinositol-4-phosphate 5-kinase activity, phosphatidylinositol phosphate kinase activity, ATP binding; INVOLVED IN: phosphatidylinositol metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, plant (InterPro:IPR017163), MORN motif (InterPro:IPR003409), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol-4-phosphate 5-kinase family protein (TAIR:AT1G10900.1). & (reliability: 170.2) &  (original description: no original description)","protein_coding"
"Kfl00613_0070","kfl00613_0070_v1.1","Klebsormidium nitens","(p93411|ccnc_orysa : 255.0) G1/S-specific cyclin C-type - Oryza sativa (Rice) & (at5g48640 : 238.0) Cyclin family protein; CONTAINS InterPro DOMAIN/s: Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin family protein (TAIR:AT5G48630.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 476.0) &  (original description: no original description)","protein_coding"
"Kfl00617_0080","kfl00617_0080_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00637_0010","kfl00637_0010_v1.1","Klebsormidium nitens","(at2g44850 : 112.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: M germinated pollen stage, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0565 (InterPro:IPR018881); Has 106 Blast hits to 106 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 73; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 224.0) &  (original description: no original description)","protein_coding"
"Kfl00680_0020","kfl00680_0020_v1.1","Klebsormidium nitens","(at2g40860 : 568.0) protein kinase family protein / protein phosphatase 2C ( PP2C) family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein serine/threonine phosphatase activity, protein kinase activity, catalytic activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C, N-terminal (InterPro:IPR014045), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: HOPW1-1-interacting 2 (TAIR:AT4G31750.1); Has 131448 Blast hits to 130118 proteins in 4510 species: Archae - 166; Bacteria - 15372; Metazoa - 47633; Fungi - 11848; Plants - 35207; Viruses - 642; Other Eukaryotes - 20580 (source: NCBI BLink). & (o24585|cri4_maize : 92.8) Putative receptor protein kinase CRINKLY4 precursor (EC 2.7.11.1) - Zea mays (Maize) & (reliability: 1136.0) &  (original description: no original description)","protein_coding"
"Kfl00689_0100","kfl00689_0100_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00691_0070","kfl00691_0070_v1.1","Klebsormidium nitens","(at1g09140 : 225.0) Encodes a serine-arginine rich RNA binding protein involved in regulation of splicing (including splicing of itself). Exists as 3 alternative spliced forms that are differentially expressed.; SERINE-ARGININE PROTEIN 30 (ATSRP30); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G02840.3); Has 23 Blast hits to 23 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 450.0) &  (original description: no original description)","protein_coding"
"Kfl00693_0070","kfl00693_0070_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00700_0010","kfl00700_0010_v1.1","Klebsormidium nitens","(at5g35750 : 223.0) Encodes histidine kinase AHK2.; histidine kinase 2 (HK2); FUNCTIONS IN: osmosensor activity, cytokinin receptor activity, protein histidine kinase activity; INVOLVED IN: in 8 processes; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 3 (TAIR:AT1G27320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (o49230|etr1_braol : 178.0) Ethylene receptor (EC 2.7.13.3) - Brassica oleracea (Wild cabbage) & (reliability: 446.0) &  (original description: no original description)","protein_coding"
"Kfl00717_0010","kfl00717_0010_v1.1","Klebsormidium nitens","(at2g21370 : 508.0) Although this gene has a sequence similar to xylulose kinases, several lines of experimental evidence suggest that it does not act on xylulose or deoxy-xylulose.; xylulose kinase-1 (XK-1); FUNCTIONS IN: xylulokinase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: chloroplast, plastid, cytoplasm; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate kinase, FGGY (InterPro:IPR000577), Carbohydrate kinase, FGGY, N-terminal (InterPro:IPR018484), Carbohydrate kinase, FGGY, C-terminal (InterPro:IPR018485); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1016.0) &  (original description: no original description)","protein_coding"
"Kfl00722_0010","kfl00722_0010_v1.1","Klebsormidium nitens","(at1g79440 : 577.0) Encodes a mitochondrial succinic semialdehyde dehydrogenase (SSADH).  Nomenclature according to Kirch, et al (2004).; aldehyde dehydrogenase 5F1 (ALDH5F1); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, NAD or NADH binding, copper ion binding, succinate-semialdehyde dehydrogenase activity; INVOLVED IN: in 6 processes; LOCATED IN: mitochondrion, chloroplast, mitochondrial matrix; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160), Succinic semialdehyde dehydrogenase (InterPro:IPR010102); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 2B4 (TAIR:AT3G48000.1); Has 62487 Blast hits to 62143 proteins in 3037 species: Archae - 481; Bacteria - 36218; Metazoa - 2614; Fungi - 2131; Plants - 1502; Viruses - 0; Other Eukaryotes - 19541 (source: NCBI BLink). & (o24174|badh_orysa : 291.0) Betaine-aldehyde dehydrogenase (EC 1.2.1.8) (BADH) - Oryza sativa (Rice) & (reliability: 1154.0) &  (original description: no original description)","protein_coding"
"Kfl00745_0020","kfl00745_0020_v1.1","Klebsormidium nitens","(at1g19450 : 392.0) Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G75220.1); Has 32354 Blast hits to 31683 proteins in 2302 species: Archae - 652; Bacteria - 16202; Metazoa - 5205; Fungi - 6407; Plants - 2489; Viruses - 2; Other Eukaryotes - 1397 (source: NCBI BLink). & (q41144|stc_ricco : 145.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (reliability: 784.0) &  (original description: no original description)","protein_coding"
"Kfl00765_0040","kfl00765_0040_v1.1","Klebsormidium nitens","(at4g31600 : 199.0) UDP-N-acetylglucosamine (UAA) transporter family; INVOLVED IN: transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UAA transporter (InterPro:IPR013657); BEST Arabidopsis thaliana protein match is: Nucleotide/sugar transporter family protein (TAIR:AT4G32272.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 398.0) &  (original description: no original description)","protein_coding"
"Kfl00775_0020","kfl00775_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00842_0010","kfl00842_0010_v1.1","Klebsormidium nitens","(at3g53760 : 644.0) Encodes GCP4 (gamma-Tubulin Complex Protein 4), required for microtubule organization.; GAMMA-TUBULIN COMPLEX PROTEIN 4 (GCP4); CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259); BEST Arabidopsis thaliana protein match is: spindle pole body component 98 (TAIR:AT5G06680.1); Has 1249 Blast hits to 1181 proteins in 191 species: Archae - 0; Bacteria - 0; Metazoa - 551; Fungi - 320; Plants - 155; Viruses - 0; Other Eukaryotes - 223 (source: NCBI BLink). & (q9sc88|gcp4_medtr : 619.0) Gamma-tubulin complex component 4 homolog - Medicago truncatula (Barrel medic) & (reliability: 1288.0) &  (original description: no original description)","protein_coding"
"Kfl00925_g2","kfl00925_g2_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00981_0010","kfl00981_0010_v1.1","Klebsormidium nitens","(at5g21040 : 271.0) Encodes an F-box containing protein that interacts physically with BHLH32 and appears to be involved in mediating phosphate starvation responses.; F-box protein 2 (FBX2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cellular response to phosphate starvation; LOCATED IN: SCF ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), F-box domain, cyclin-like (InterPro:IPR001810), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), F-box domain, Skp2-like (InterPro:IPR022364), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G43770.1). & (reliability: 542.0) &  (original description: no original description)","protein_coding"
"Kfl01038_0020","kfl01038_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl01166_0020","kfl01166_0020_v1.1","Klebsormidium nitens","(at5g64500 : 423.0) Major facilitator superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G22730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 778.0) &  (original description: no original description)","protein_coding"
"Kfl01351_0010","kfl01351_0010_v1.1","Klebsormidium nitens","(at3g20630 : 903.0) Encodes a ubiquitin-specific protease.  Identical to TTN6. Loss of function mutations are embryo lethals, having development arrested at the preglobular/globular stage.  Also involved in root responses to phosphate deficiency.; ubiquitin-specific protease 14 (UBP14); CONTAINS InterPro DOMAIN/s: Zinc finger, UBP-type (InterPro:IPR001607), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), UBA-like (InterPro:IPR009060), Ubiquitinyl hydrolase (InterPro:IPR016652); Has 2045 Blast hits to 1942 proteins in 227 species: Archae - 0; Bacteria - 2; Metazoa - 1042; Fungi - 463; Plants - 217; Viruses - 0; Other Eukaryotes - 321 (source: NCBI BLink). & (reliability: 1806.0) &  (original description: no original description)","protein_coding"
"LOC_Os01g04690","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g12800","No alias","Oryza sativa","peroxisomal membrane protein, putative, expressed","protein_coding"
"LOC_Os01g23580","No alias","Oryza sativa","inorganic H+ pyrophosphatase, putative, expressed","protein_coding"
"LOC_Os01g34460","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g42700","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os01g46750","No alias","Oryza sativa","AMP-binding enzyme, putative, expressed","protein_coding"
"LOC_Os01g48190","No alias","Oryza sativa","drought induced 19 protein, putative, expressed","protein_coding"
"LOC_Os01g55490","No alias","Oryza sativa","transcriptional regulator family protein, putative, expressed","protein_coding"
"LOC_Os01g55730","No alias","Oryza sativa","AGAP003732-PA, putative, expressed","protein_coding"
"LOC_Os01g59110","No alias","Oryza sativa","indole-3-acetate beta-glucosyltransferase, putative, expressed","protein_coding"
"LOC_Os02g11750","No alias","Oryza sativa","RNA recognition motif containing protein, putative, expressed","protein_coding"
"LOC_Os02g12660","No alias","Oryza sativa","protein kinase domain containing protein, putative, expressed","protein_coding"
"LOC_Os02g22190","No alias","Oryza sativa","glycosyltransferase, putative, expressed","protein_coding"
"LOC_Os02g34120","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g37856","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os02g43250","No alias","Oryza sativa","receptor-like protein kinase precursor, putative, expressed","protein_coding"
"LOC_Os02g49260","No alias","Oryza sativa","transporter-related, putative, expressed","protein_coding"
"LOC_Os02g49410","No alias","Oryza sativa","histone-like transcription factor and archaeal histone, putative, expressed","protein_coding"
"LOC_Os02g53670","No alias","Oryza sativa","MYB family transcription factor, putative, expressed","protein_coding"
"LOC_Os03g02260","No alias","Oryza sativa","DnaK family protein, putative, expressed","protein_coding"
"LOC_Os03g07160","No alias","Oryza sativa","OsFBK11 - F-box domain and kelch repeat containing protein, expressed","protein_coding"
"LOC_Os03g08390","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g13460","No alias","Oryza sativa","microtubule associated protein, putative, expressed","protein_coding"
"LOC_Os03g13550","No alias","Oryza sativa","oxidoreductase, putative, expressed","protein_coding"
"LOC_Os03g20860","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g39710","No alias","Oryza sativa","transporter family protein, putative, expressed","protein_coding"
"LOC_Os03g41390","No alias","Oryza sativa","ZOS3-15 - C2H2 zinc finger protein, expressed","protein_coding"
"LOC_Os03g48150","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os03g49420","No alias","Oryza sativa","HEAT repeat family protein, putative, expressed","protein_coding"
"LOC_Os03g52120","No alias","Oryza sativa","DNA binding protein, putative, expressed","protein_coding"
"LOC_Os03g52430","No alias","Oryza sativa","mitochondrial carrier protein, putative, expressed","protein_coding"
"LOC_Os03g54084","No alias","Oryza sativa","phytochrome C, putative, expressed","protein_coding"
"LOC_Os03g63160","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os04g04010","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os04g28030","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os04g38340","No alias","Oryza sativa","endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed","protein_coding"
"LOC_Os04g48010","No alias","Oryza sativa","WD-40 repeat family protein, putative, expressed","protein_coding"
"LOC_Os04g49850","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os04g51520","No alias","Oryza sativa","glycosyl hydrolases family 16, putative, expressed","protein_coding"
"LOC_Os04g54340","No alias","Oryza sativa","double-strand break repair protein MRE11, putative, expressed","protein_coding"
"LOC_Os05g01360","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os05g02170","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os05g04520","No alias","Oryza sativa","protein kinase, putative, expressed","protein_coding"
"LOC_Os05g05270","No alias","Oryza sativa","sucrose-phosphatase, putative, expressed","protein_coding"
"LOC_Os05g06650","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os05g10940","No alias","Oryza sativa","metal cation transporter, putative, expressed","protein_coding"
"LOC_Os05g11950","No alias","Oryza sativa","GDSL-like lipase/acylhydrolase, putative, expressed","protein_coding"
"LOC_Os05g19970","No alias","Oryza sativa","ZOS5-06 - C2H2 zinc finger protein, expressed","protein_coding"
"LOC_Os05g22260","No alias","Oryza sativa","crooked neck, putative, expressed","protein_coding"
"LOC_Os05g23470","No alias","Oryza sativa","AN1-like zinc finger domain containing protein, expressed","protein_coding"
"LOC_Os05g33550","No alias","Oryza sativa","methyl-binding domain protein MBD, putative, expressed","protein_coding"
"LOC_Os05g36930","No alias","Oryza sativa","histone deacetylase, putative, expressed","protein_coding"
"LOC_Os06g22190","No alias","Oryza sativa","retrotransposon protein, putative, unclassified, expressed","protein_coding"
"LOC_Os06g39140","No alias","Oryza sativa","hemoglobin-like protein HbO, putative, expressed","protein_coding"
"LOC_Os06g40704","No alias","Oryza sativa","stromal membrane-associated protein, putative, expressed","protein_coding"
"LOC_Os06g43630","No alias","Oryza sativa","sucrose-phosphate synthase, putative, expressed","protein_coding"
"LOC_Os06g45440","No alias","Oryza sativa","haloacid dehalogenase-like hydrolase domain-containing protein 3, putative, expressed","protein_coding"
"LOC_Os06g48355","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os07g08190","No alias","Oryza sativa","cyclophilin, putative, expressed","protein_coding"
"LOC_Os07g46230","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os07g46340","No alias","Oryza sativa","methyltransferase, putative, expressed","protein_coding"
"LOC_Os08g03370","No alias","Oryza sativa","Divergent PAP2 family domain containing protein, expressed","protein_coding"
"LOC_Os08g06490","No alias","Oryza sativa","pentatricopeptide, putative, expressed","protein_coding"
"LOC_Os08g09010","No alias","Oryza sativa","Cupin domain containing protein, expressed","protein_coding"
"LOC_Os08g14490","No alias","Oryza sativa","dehydrogenase-phosphopantetheinyltransferase, putative, expressed","protein_coding"
"LOC_Os08g39050","No alias","Oryza sativa","pentatricopeptide, putative, expressed","protein_coding"
"LOC_Os08g39350","No alias","Oryza sativa","glycerophosphoryl diester phosphodiesterase family protein, putative, expressed","protein_coding"
"LOC_Os08g39630","No alias","Oryza sativa","helix-loop-helix DNA-binding domain containing protein, expressed","protein_coding"
"LOC_Os09g04810","No alias","Oryza sativa","myosin heavy chain-related, putative, expressed","protein_coding"
"LOC_Os09g07380","No alias","Oryza sativa","frigida, putative, expressed","protein_coding"
"LOC_Os09g24540","No alias","Oryza sativa","peptidyl-prolyl cis-trans isomerase, putative, expressed","protein_coding"
"LOC_Os09g24970","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os09g36190","No alias","Oryza sativa","glycosyl transferase family 8, putative, expressed","protein_coding"
"LOC_Os09g37480","No alias","Oryza sativa","OsSAUR53 - Auxin-responsive SAUR gene family member, expressed","protein_coding"
"LOC_Os10g35720","No alias","Oryza sativa","OsGrx_S17 - glutaredoxin subgroup II, expressed","protein_coding"
"LOC_Os10g41340","No alias","Oryza sativa","palmitoyl-protein thioesterase 1 precursor, putative, expressed","protein_coding"
"LOC_Os10g42630","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os10g42690","No alias","Oryza sativa","jmjC domain containing protein, expressed","protein_coding"
"LOC_Os11g04160","No alias","Oryza sativa","dehydrogenase-phosphopantetheinyltransferase, putative, expressed","protein_coding"
"LOC_Os11g05810","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os11g06040","No alias","Oryza sativa","PX domain containing protein, putative, expressed","protein_coding"
"LOC_Os11g11070","No alias","Oryza sativa","mRNA-capping enzyme, putative, expressed","protein_coding"
"LOC_Os11g11370","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os11g23050","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os11g37280","No alias","Oryza sativa","LTPL68 - Protease inhibitor/seed storage/LTP family protein precursor, expressed","protein_coding"
"LOC_Os12g03960","No alias","Oryza sativa","dehydrogenase-phosphopantetheinyltransferase, putative, expressed","protein_coding"
"LOC_Os12g18070","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os12g26050","No alias","Oryza sativa","hypothetical protein","protein_coding"
"LOC_Os12g36950","No alias","Oryza sativa","CTP synthase, putative, expressed","protein_coding"
"LOC_Os12g39400","No alias","Oryza sativa","ZOS12-09 - C2H2 zinc finger protein, expressed","protein_coding"
"MA_101288g0010","No alias","Picea abies","(at3g51000 : 81.6) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: epoxide hydrolase activity, catalytic activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G05600.1); Has 19118 Blast hits to 19078 proteins in 1849 species: Archae - 110; Bacteria - 13477; Metazoa - 828; Fungi - 558; Plants - 614; Viruses - 8; Other Eukaryotes - 3523 (source: NCBI BLink). & (reliability: 163.2) &  (original description: no original description)","protein_coding"
"MA_1022031g0010","No alias","Picea abies","(at1g26190 : 212.0) Phosphoribulokinase / Uridine kinase family; FUNCTIONS IN: adenylate cyclase activity, kinase activity, phosphotransferase activity, alcohol group as acceptor, ATP binding; INVOLVED IN: biosynthetic process, cAMP biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764), Adenylate cyclase (InterPro:IPR008172); BEST Arabidopsis thaliana protein match is: Phosphoribulokinase / Uridine kinase family (TAIR:AT1G73980.1); Has 4771 Blast hits to 4715 proteins in 1747 species: Archae - 39; Bacteria - 3460; Metazoa - 396; Fungi - 136; Plants - 334; Viruses - 2; Other Eukaryotes - 404 (source: NCBI BLink). & (reliability: 424.0) &  (original description: no original description)","protein_coding"
"MA_10425817g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_10426376g0010","No alias","Picea abies","(at2g38270 : 249.0) Encodes protein homologous to CXIP1.  CXIP1 is a PICOT domain containing protein interacts with CAX1, a high capacity calcium transporter.  However, CXP2 does not interact with CAX1 and only moderately activates another calcium transporter CAX4.; CAX-interacting protein 2 (CXIP2); FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cation transport; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336), Glutaredoxin-related protein (InterPro:IPR004480); BEST Arabidopsis thaliana protein match is: CAX interacting protein 1 (TAIR:AT3G54900.1); Has 5833 Blast hits to 5648 proteins in 1292 species: Archae - 30; Bacteria - 2544; Metazoa - 528; Fungi - 278; Plants - 476; Viruses - 0; Other Eukaryotes - 1977 (source: NCBI BLink). & (reliability: 498.0) &  (original description: no original description)","protein_coding"
"MA_10426635g0010","No alias","Picea abies","(q6z2t3|lsi1_orysa : 264.0) Silicon transporter LSI1 (Low silicon protein 1) - Oryza sativa (Rice) & (at5g37810 : 235.0) NOD26-like intrinsic protein 4;1 (NIP4;1); FUNCTIONS IN: water channel activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: NOD26-like intrinsic protein 4;2 (TAIR:AT5G37820.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 458.0) &  (original description: no original description)","protein_coding"
"MA_10426754g0010","No alias","Picea abies","(at2g47060 : 499.0) Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G62220.1). & (q8l4h4|nork_medtr : 214.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 998.0) &  (original description: no original description)","protein_coding"
"MA_10426984g0010","No alias","Picea abies","(at4g12240 : 218.0) zinc finger (C2H2 type) family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT5G52010.1); Has 77 Blast hits to 77 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 71; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 436.0) &  (original description: no original description)","protein_coding"
"MA_10428406g0010","No alias","Picea abies","(at3g09350 : 255.0) Encodes one of the Arabidopsis orthologs of the human Hsp70-binding protein 1 (HspBP-1) and yeast Fes1p: Fes1A (AT3G09350), Fes1B (AT3G53800), Fes1C (AT5G02150). Fes1A is cytosolic and associates with cytosolic Hsp70.  Mutants showed increased heat-sensitive phenotype suggestion the involvement of Fes1A in acquired thermotolerance.  Does not have nucleotide exchange factor activity in vitro.; Fes1A (Fes1A); CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Fes1B (TAIR:AT3G53800.1); Has 594 Blast hits to 590 proteins in 194 species: Archae - 0; Bacteria - 0; Metazoa - 194; Fungi - 149; Plants - 182; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). & (reliability: 510.0) &  (original description: no original description)","protein_coding"
"MA_10429055g0010","No alias","Picea abies","(at1g06460 : 118.0) ACD32.1 encodes an alpha-crystallin domain  containing protein with homology to small heat shock proteins.; alpha-crystallin domain 32.1 (ACD32.1); INVOLVED IN: response to heat; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: heat shock protein 17.6A (TAIR:AT5G12030.1); Has 3590 Blast hits to 3590 proteins in 1004 species: Archae - 36; Bacteria - 2284; Metazoa - 1; Fungi - 156; Plants - 751; Viruses - 0; Other Eukaryotes - 362 (source: NCBI BLink). & (reliability: 236.0) &  (original description: no original description)","protein_coding"
"MA_10429520g0010","No alias","Picea abies","(q6i581|gh35_orysa : 556.0) Probable indole-3-acetic acid-amido synthetase GH3.5 (EC 6.3.2.-) (Auxin-responsive GH3-like protein 5) (OsGH3-5) - Oryza sativa (Rice) & (at2g46370 : 528.0) Encodes a jasmonate-amido synthetase that is a member of the GH3 family of proteins. JAR1 catalyzes the formation of a biologically active jasmonyl-isoleucine (JA-Ile) conjugate. JA-Ile promotes the interaction between JAZ1 and COI1 in the jasmonate signaling pathway. JAR1 localizes to the cytoplasm and is also a phytochrome A signaling component. JAR1 is an auxin-induced gene. Loss of function mutants are defective in a variety of responses to jasmonic acid. JAR1 has additional enzymatic activities in vitro, (e.g. the ability to synthesize adenosine 5'-tetraphosphate and other JA conjugates), but there are no data to show whether JAR1 catalyzes many of these reactions in vivo. JAR1 is involved in pathogen defense, sensitivity to ozone, and wound responses.; JASMONATE RESISTANT 1 (JAR1); FUNCTIONS IN: catalytic activity, adenylyltransferase activity, ATP binding, jasmonate-amino synthetase activity; INVOLVED IN: in 13 processes; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT4G03400.1). & (reliability: 1056.0) &  (original description: no original description)","protein_coding"
"MA_10430090g0010","No alias","Picea abies","(at1g09900 : 431.0) Pentatricopeptide repeat (PPR-like) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR-like) superfamily protein (TAIR:AT3G04760.1); Has 67710 Blast hits to 15322 proteins in 310 species: Archae - 4; Bacteria - 73; Metazoa - 1094; Fungi - 1217; Plants - 62670; Viruses - 0; Other Eukaryotes - 2652 (source: NCBI BLink). & (q76c99|rf1_orysa : 305.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 862.0) &  (original description: no original description)","protein_coding"
"MA_10431000g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_10432896g0010","No alias","Picea abies","(at4g39470 : 183.0) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Protein prenylyltransferase superfamily protein (TAIR:AT3G18420.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 366.0) &  (original description: no original description)","protein_coding"
"MA_10433543g0010","No alias","Picea abies","(at4g13650 : 679.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G16480.1); Has 61118 Blast hits to 14026 proteins in 284 species: Archae - 2; Bacteria - 18; Metazoa - 154; Fungi - 167; Plants - 59907; Viruses - 0; Other Eukaryotes - 870 (source: NCBI BLink). & (q76c99|rf1_orysa : 122.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1358.0) &  (original description: no original description)","protein_coding"
"MA_10435112g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_10435312g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_10435785g0010","No alias","Picea abies","(at3g11470 : 179.0) 4'-phosphopantetheinyl transferase superfamily; FUNCTIONS IN: holo-[acyl-carrier-protein] synthase activity, magnesium ion binding, transferase activity; INVOLVED IN: metabolic process, macromolecule biosynthetic process; CONTAINS InterPro DOMAIN/s: 4&apos;-phosphopantetheinyl transferase (InterPro:IPR008278); BEST Arabidopsis thaliana protein match is: 4'-phosphopantetheinyl transferase superfamily (TAIR:AT2G02770.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 324.0) &  (original description: no original description)","protein_coding"
"MA_11165g0010","No alias","Picea abies","(at1g68760 : 170.0) Encodes a cytosol-localized nudix hydrolase that hydrolyzes 8-oxo-(d)GTP to its monophosphate form. This protective mechanism prevents the misincorporation of these oxidized nucleotides into DNA and RNA. NUDX1 also has a low level of dihydroneopterin triphosphate pyrophosphatase activity in vitro and may participate in the folate synthesis pathway.; nudix hydrolase  1 (NUDX1); FUNCTIONS IN: hydrolase activity, dihydroneopterin triphosphate pyrophosphohydrolase activity, 8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity; INVOLVED IN: response to DNA damage stimulus; LOCATED IN: cytosol; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase (InterPro:IPR020476), NUDIX hydrolase, conserved site (InterPro:IPR020084), NUDIX hydrolase domain (InterPro:IPR000086); Has 6319 Blast hits to 6317 proteins in 1575 species: Archae - 191; Bacteria - 5327; Metazoa - 193; Fungi - 66; Plants - 51; Viruses - 14; Other Eukaryotes - 477 (source: NCBI BLink). & (reliability: 340.0) &  (original description: no original description)","protein_coding"
"MA_12023g0010","No alias","Picea abies","(at4g02750 : 731.0) Tetratricopeptide repeat (TPR)-like superfamily protein; LOCATED IN: mitochondrion; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G09410.1); Has 56089 Blast hits to 14902 proteins in 275 species: Archae - 0; Bacteria - 15; Metazoa - 173; Fungi - 123; Plants - 55165; Viruses - 0; Other Eukaryotes - 613 (source: NCBI BLink). & (q76c99|rf1_orysa : 142.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1462.0) &  (original description: no original description)","protein_coding"
"MA_120753g0010","No alias","Picea abies","(at4g02340 : 169.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: epoxide hydrolase activity, catalytic activity; LOCATED IN: peroxisome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G05600.1); Has 22331 Blast hits to 22276 proteins in 1970 species: Archae - 173; Bacteria - 16575; Metazoa - 610; Fungi - 564; Plants - 630; Viruses - 11; Other Eukaryotes - 3768 (source: NCBI BLink). & (reliability: 338.0) &  (original description: no original description)","protein_coding"
"MA_20115g0020","No alias","Picea abies","(at4g00620 : 328.0) Amino acid dehydrogenase family protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: folic acid and derivative biosynthetic process, metabolic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain (InterPro:IPR020631), Tetrahydrofolate dehydrogenase/cyclohydrolase (InterPro:IPR000672), NAD(P)-binding domain (InterPro:IPR016040), Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site (InterPro:IPR020867), Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain (InterPro:IPR020630); BEST Arabidopsis thaliana protein match is: Amino acid dehydrogenase family protein (TAIR:AT4G00600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 656.0) &  (original description: no original description)","protein_coding"
"MA_222847g0010","No alias","Picea abies",""(at1g67110 : 206.0) member of CYP709A; ""cytochrome P450, family 735, subfamily A, polypeptide 2"" (CYP735A2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 735, subfamily A, polypeptide 1 (TAIR:AT5G38450.1); Has 33174 Blast hits to 33061 proteins in 1685 species: Archae - 70; Bacteria - 4727; Metazoa - 11578; Fungi - 6785; Plants - 8543; Viruses - 6; Other Eukaryotes - 1465 (source: NCBI BLink). & (q05047|c72a1_catro : 194.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 412.0) &  (original description: no original description)"","protein_coding"
"MA_286042g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_294189g0010","No alias","Picea abies","(q43847|ssy2_soltu : 536.0) Granule-bound starch synthase 2, chloroplast precursor (EC 2.4.1.21) (Granule-bound starch synthase II) (SS II) (GBSS-II) - Solanum tuberosum (Potato) & (at3g01180 : 510.0) starch synthase 2 (SS2); FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: cellulose biosynthetic process, glucan biosynthetic process, biosynthetic process, glycogen biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycogen/starch synthases, ADP-glucose type (InterPro:IPR011835), Starch synthase, catalytic domain (InterPro:IPR013534), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: Glycogen/starch synthases, ADP-glucose type (TAIR:AT5G24300.2); Has 15927 Blast hits to 11968 proteins in 3394 species: Archae - 233; Bacteria - 4788; Metazoa - 1175; Fungi - 1070; Plants - 4691; Viruses - 26; Other Eukaryotes - 3944 (source: NCBI BLink). & (reliability: 1020.0) &  (original description: no original description)","protein_coding"
"MA_31242g0010","No alias","Picea abies","(at3g45830 : 161.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02290.1); Has 499 Blast hits to 438 proteins in 100 species: Archae - 0; Bacteria - 7; Metazoa - 236; Fungi - 15; Plants - 108; Viruses - 2; Other Eukaryotes - 131 (source: NCBI BLink). & (reliability: 322.0) &  (original description: no original description)","protein_coding"
"MA_4863g0010","No alias","Picea abies","(at3g13220 : 615.0) Encodes a ATP-binding cassette transporter G26 (ABCG26) involved in tapetal cell and pollen development. Required for male fertility and pollen exine formation.; WBC27; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G52310.1); Has 402808 Blast hits to 366123 proteins in 4145 species: Archae - 7203; Bacteria - 319822; Metazoa - 8717; Fungi - 6492; Plants - 5411; Viruses - 13; Other Eukaryotes - 55150 (source: NCBI BLink). & (q5z9s8|pdr12_orysa : 165.0) Pleiotropic drug resistance protein 12 - Oryza sativa (Rice) & (reliability: 1230.0) &  (original description: no original description)","protein_coding"
"MA_58746g0010","No alias","Picea abies","(q04672|sbp_soybn : 151.0) Sucrose-binding protein precursor (SBP) - Glycine max (Soybean) & (at3g22640 : 116.0) PAP85; FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: plant-type cell wall; EXPRESSED IN: stem, seed; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT4G36700.1); Has 886 Blast hits to 876 proteins in 129 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 0; Plants - 826; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). & (reliability: 232.0) &  (original description: no original description)","protein_coding"
"MA_59485g0010","No alias","Picea abies","(at3g23940 : 157.0) dehydratase family; CONTAINS InterPro DOMAIN/s: Dihydroxy-acid dehydratase (InterPro:IPR004404), Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site (InterPro:IPR020558), Dihydroxy-acid/6-phosphogluconate dehydratase (InterPro:IPR000581). & (reliability: 314.0) &  (original description: no original description)","protein_coding"
"MA_61352g0010","No alias","Picea abies","(at1g68750 : 402.0) Encodes one of four Arabidopsis phosphoenolpyruvate (PEP) carboxylase proteins. But, it is more similar to bacterial PEP carboxylase than plant PEP carboxylase. Efforts to express this enzyme and to demonstrate its enzymatic activity in E.coli failed.; phosphoenolpyruvate carboxylase 4 (PPC4); CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Phosphoenolpyruvate carboxylase, active site (InterPro:IPR018129), Phosphoenolpyruvate carboxylase (InterPro:IPR001449), Phosphoenolpyruvate carboxylase, C-terminal region (InterPro:IPR021135); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase 1 (TAIR:AT1G53310.3); Has 9944 Blast hits to 6686 proteins in 1878 species: Archae - 54; Bacteria - 5038; Metazoa - 4; Fungi - 0; Plants - 1854; Viruses - 0; Other Eukaryotes - 2994 (source: NCBI BLink). & (q6r2v6|capp2_chlre : 326.0) Phosphoenolpyruvate carboxylase 2 (EC 4.1.1.31) (PEP carboxylase 2) (PEPCase 2) (PEPC 2) - Chlamydomonas reinhardtii & (reliability: 804.0) &  (original description: no original description)","protein_coding"
"MA_694407g0010","No alias","Picea abies","(at2g40600 : 166.0) appr-1-p processing enzyme family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Appr-1-p processing (InterPro:IPR002589); BEST Arabidopsis thaliana protein match is: appr-1-p processing enzyme family protein (TAIR:AT1G69340.1); Has 3775 Blast hits to 3643 proteins in 1376 species: Archae - 162; Bacteria - 2045; Metazoa - 672; Fungi - 129; Plants - 171; Viruses - 376; Other Eukaryotes - 220 (source: NCBI BLink). & (reliability: 332.0) &  (original description: no original description)","protein_coding"
"MA_71924g0010","No alias","Picea abies","(at4g18520 : 226.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G39530.1); Has 48062 Blast hits to 12645 proteins in 202 species: Archae - 0; Bacteria - 8; Metazoa - 107; Fungi - 40; Plants - 47280; Viruses - 0; Other Eukaryotes - 627 (source: NCBI BLink). & (q76c99|rf1_orysa : 87.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 452.0) &  (original description: no original description)","protein_coding"
"MA_728362g0010","No alias","Picea abies","(q7xzf7|gyra_orysa : 99.4) Probable DNA gyrase subunit A, chloroplast/mitochondrial precursor (EC 5.99.1.3) - Oryza sativa (Rice) & (at3g10690 : 98.6) DNA GYRASE A (GYRA); FUNCTIONS IN: DNA topoisomerase activity, catalytic activity, ATP binding; INVOLVED IN: DNA topological change, DNA metabolic process; LOCATED IN: mitochondrion, chloroplast, nucleoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA gyrase, subunit A (InterPro:IPR005743), DNA topoisomerase, type IIA, subunit A/C-terminal (InterPro:IPR002205), DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta (InterPro:IPR013758), DNA topoisomerase, type IIA, subunit A, alpha-helical (InterPro:IPR013757), DNA topoisomerase, type IIA, central (InterPro:IPR013760), DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel (InterPro:IPR006691); BEST Arabidopsis thaliana protein match is: topoisomerase II (TAIR:AT3G23890.1); Has 22353 Blast hits to 21396 proteins in 3265 species: Archae - 84; Bacteria - 12907; Metazoa - 182; Fungi - 204; Plants - 111; Viruses - 99; Other Eukaryotes - 8766 (source: NCBI BLink). & (reliability: 197.2) &  (original description: no original description)","protein_coding"
"MA_80827g0010","No alias","Picea abies","(at4g11120 : 112.0) translation elongation factor Ts (EF-Ts), putative; FUNCTIONS IN: translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor Ts, conserved site (InterPro:IPR018101), Translation elongation factor EFTs/EF1B (InterPro:IPR001816), UBA-like (InterPro:IPR009060), Translation elongation factor EFTs/EF1B, dimerisation (InterPro:IPR014039); BEST Arabidopsis thaliana protein match is: elongation factor Ts family protein (TAIR:AT4G29060.1); Has 9471 Blast hits to 8571 proteins in 2664 species: Archae - 0; Bacteria - 5908; Metazoa - 120; Fungi - 25; Plants - 215; Viruses - 0; Other Eukaryotes - 3203 (source: NCBI BLink). & (reliability: 224.0) &  (original description: no original description)","protein_coding"
"MA_82470g0010","No alias","Picea abies","(at1g62390 : 683.0) Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein; FUNCTIONS IN: binding; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein (TAIR:AT2G25290.3); Has 5282 Blast hits to 4636 proteins in 331 species: Archae - 11; Bacteria - 234; Metazoa - 2213; Fungi - 870; Plants - 1167; Viruses - 2; Other Eukaryotes - 785 (source: NCBI BLink). & (reliability: 1366.0) &  (original description: no original description)","protein_coding"
"MA_85974g0010","No alias","Picea abies","(at4g28590 : 84.3) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT2G31840.1); Has 114 Blast hits to 112 proteins in 39 species: Archae - 2; Bacteria - 0; Metazoa - 17; Fungi - 6; Plants - 67; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 168.6) &  (original description: no original description)","protein_coding"
"MA_8898639g0010","No alias","Picea abies","(p25317|gstxa_tobac : 234.0) Probable glutathione S-transferase parA (EC 2.5.1.18) (Auxin-regulated protein parA) (STR246C protein) - Nicotiana tabacum (Common tobacco) & (at1g17180 : 214.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 25 (GSTU25); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 24 (TAIR:AT1G17170.1); Has 6324 Blast hits to 6297 proteins in 1135 species: Archae - 0; Bacteria - 2853; Metazoa - 581; Fungi - 157; Plants - 1982; Viruses - 0; Other Eukaryotes - 751 (source: NCBI BLink). & (reliability: 428.0) &  (original description: no original description)","protein_coding"
"MA_89868g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding"
"MA_93866g0010","No alias","Picea abies","(at3g47630 : 109.0) CONTAINS InterPro DOMAIN/s: Mitochondrial matrix Mmp37 (InterPro:IPR015222); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 218.0) &  (original description: no original description)","protein_coding"
"MA_94706g0010","No alias","Picea abies","(at3g15970 : 178.0) NUP50 (Nucleoporin 50 kDa) protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular transport; LOCATED IN: nuclear pore; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ran binding protein 1 (InterPro:IPR000156), Pleckstrin homology-type (InterPro:IPR011993), Nuclear pore complex, NUP2/50/61 (InterPro:IPR015007); BEST Arabidopsis thaliana protein match is: NUP50 (Nucleoporin 50 kDa) protein (TAIR:AT1G52380.1); Has 4078 Blast hits to 2719 proteins in 441 species: Archae - 18; Bacteria - 1103; Metazoa - 1379; Fungi - 710; Plants - 228; Viruses - 8; Other Eukaryotes - 632 (source: NCBI BLink). & (reliability: 356.0) &  (original description: no original description)","protein_coding"
"MA_952069g0010","No alias","Picea abies","(at2g39670 : 87.4) Radical SAM superfamily protein; FUNCTIONS IN: iron-sulfur cluster binding, catalytic activity, RNA methyltransferase activity; INVOLVED IN: rRNA processing; LOCATED IN: cytoplasm; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Ribosomal RNA large subunit methyltransferase RlmN; (InterPro:IPR004383), Radical SAM (InterPro:IPR007197); BEST Arabidopsis thaliana protein match is: Radical SAM superfamily protein (TAIR:AT3G19630.1); Has 6992 Blast hits to 6986 proteins in 2311 species: Archae - 11; Bacteria - 5102; Metazoa - 1; Fungi - 1; Plants - 134; Viruses - 5; Other Eukaryotes - 1738 (source: NCBI BLink). & (reliability: 174.8) &  (original description: no original description)","protein_coding"
"Mp1g03590.1","No alias","Marchantia polymorpha","AGP beta-1,6-galactosyltransferase","protein_coding"
"Mp1g20330.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp1g20770.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp2g16970.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp2g22700.1","No alias","Marchantia polymorpha","chalcone synthase","protein_coding"
"Mp3g06610.1","No alias","Marchantia polymorpha","Enzyme classification.EC_1 oxidoreductases.EC_1.13 oxidoreductase acting on single donor with incorporation of molecular oxygen (oxygenase)(50.1.12 : 812.7) & Probable linoleate 9S-lipoxygenase 4 OS=Solanum tuberosum (sp|q43190|lox14_soltu : 686.0)","protein_coding"
"Mp3g07750.1","No alias","Marchantia polymorpha","phosphopantetheinyl transferase (mtPPT)","protein_coding"
"Mp3g15380.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp3g16180.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp3g19530.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp4g02770.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp4g19380.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp4g24110.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp5g08490.1","No alias","Marchantia polymorpha","nitrate reductase","protein_coding"
"Mp5g12180.1","No alias","Marchantia polymorpha","Protein DMP5 OS=Arabidopsis thaliana (sp|q9m897|dmp5_arath : 88.2)","protein_coding"
"Mp5g16190.1","No alias","Marchantia polymorpha","metal cation transporter","protein_coding"
"Mp5g16430.1","No alias","Marchantia polymorpha","pepsin-type protease","protein_coding"
"Mp5g17290.1","No alias","Marchantia polymorpha","glutaredoxin","protein_coding"
"Mp6g09910.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp7g00480.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp7g00610.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp7g03630.1","No alias","Marchantia polymorpha","component QCR9 of cytochrome c reductase complex","protein_coding"
"Mp7g19120.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp8g07710.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp8g14500.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp8g15380.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Potri.006G211300","No alias","Populus trichocarpa","4\'-phosphopantetheinyl transferase superfamily","protein_coding"
"Potri.010G238500","No alias","Populus trichocarpa","4\'-phosphopantetheinyl transferase superfamily","protein_coding"
"Potri.016G078400","No alias","Populus trichocarpa","4\'-phosphopantetheinyl transferase superfamily","protein_coding"
"Pp1s11_19V6","No alias","Physcomitrella patens","deah (asp-glu-ala-asp his) box polypeptide 57","protein_coding"
"Pp1s12_275V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s140_66V6","No alias","Physcomitrella patens","coronitine insensitive 1","protein_coding"
"Pp1s15_90V6","No alias","Physcomitrella patens","histone deacetylase","protein_coding"
"Pp1s175_57V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s182_61V6","No alias","Physcomitrella patens","aarf domain containing kinase 1","protein_coding"
"Pp1s192_66V6","No alias","Physcomitrella patens","dual specificity phosphatase 12","protein_coding"
"Pp1s215_29V6","No alias","Physcomitrella patens","small rab-related gtpase","protein_coding"
"Pp1s233_45V6","No alias","Physcomitrella patens","protein binding protein","protein_coding"
"Pp1s234_5V6","No alias","Physcomitrella patens","arginine serine-rich-splicing","protein_coding"
"Pp1s275_36V6","No alias","Physcomitrella patens","F3K23.12; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s303_34V6","No alias","Physcomitrella patens","MSH12.1; expressed protein [Arabidopsis thaliana]","protein_coding"
"Pp1s31_343V6","No alias","Physcomitrella patens","eukaryotic translation initiation factor","protein_coding"
"Pp1s358_56V6","No alias","Physcomitrella patens","Nucleolar phosphoprotein p130 (Nucleolar 130 kDa protein) (140 kDa nucleolar phosphoprotein) (Nopp140) (Nucleolar and coiled-body phosphoprotein 1) [Rattus norvegicus]","protein_coding"
"Pp1s35_224V6","No alias","Physcomitrella patens","vacuolar atp synthase 21 kda proteolipid subunit","protein_coding"
"Pp1s391_39V6","No alias","Physcomitrella patens","unnamed protein product [Vitis vinifera]","protein_coding"
"Pp1s42_183V6","No alias","Physcomitrella patens","ankyrin repeat-containing","protein_coding"
"Pp1s479_13V6","No alias","Physcomitrella patens","mitogen-activated protein kinase 7","protein_coding"
"Pp1s50_118V6","No alias","Physcomitrella patens","choline kinase","protein_coding"
"Pp1s52_70V6","No alias","Physcomitrella patens","r- sec22-family","protein_coding"
"Pp1s53_233V6","No alias","Physcomitrella patens","T23J18.5; ABC1 family protein [Arabidopsis thaliana]","protein_coding"
"Pp1s60_173V6","No alias","Physcomitrella patens","af466199_12gb protein","protein_coding"
"Pp1s6_102V6","No alias","Physcomitrella patens","potassium transporter PpHAK1","protein_coding"
"Pp1s75_229V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s76_90V6","No alias","Physcomitrella patens","verticillium wilt resistance-like protein","protein_coding"
"Pp1s78_18V6","No alias","Physcomitrella patens","F24K9.7; eukaryotic translation initiation factor 3G / eIF3g [KO:K03248] [Arabidopsis thaliana]","protein_coding"
"Pp1s84_273V6","No alias","Physcomitrella patens","threonyl-trna synthetase","protein_coding"
"Pp1s93_178V6","No alias","Physcomitrella patens","eukaryotic translation initiation factor 2 beta subunit","protein_coding"
"Pp1s93_18V6","No alias","Physcomitrella patens","4 -phosphopantetheinyl transferase","protein_coding"
"PSME_00000783-RA","No alias","Pseudotsuga menziesii","(q42967|dcup_tobac : 455.0) Uroporphyrinogen decarboxylase, chloroplast precursor (EC 4.1.1.37) (URO-D) (UPD) - Nicotiana tabacum (Common tobacco) & (at2g40490 : 439.0) HEME2; FUNCTIONS IN: uroporphyrinogen decarboxylase activity; INVOLVED IN: porphyrin biosynthetic process; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Uroporphyrinogen decarboxylase HemE (InterPro:IPR006361), Uroporphyrinogen decarboxylase (URO-D) (InterPro:IPR000257); BEST Arabidopsis thaliana protein match is: Uroporphyrinogen decarboxylase (TAIR:AT3G14930.2); Has 7458 Blast hits to 7455 proteins in 2032 species: Archae - 137; Bacteria - 4041; Metazoa - 236; Fungi - 136; Plants - 121; Viruses - 0; Other Eukaryotes - 2787 (source: NCBI BLink). & (reliability: 878.0) &  (original description: no original description)","protein_coding"
"PSME_00001131-RA","No alias","Pseudotsuga menziesii","(at1g19340 : 302.0) Methyltransferase MT-A70 family protein; FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity, nucleic acid binding; INVOLVED IN: methylation, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA methylase, N-6 adenine-specific, conserved site (InterPro:IPR002052), MT-A70 (InterPro:IPR007757); Has 622 Blast hits to 622 proteins in 244 species: Archae - 4; Bacteria - 240; Metazoa - 93; Fungi - 88; Plants - 72; Viruses - 2; Other Eukaryotes - 123 (source: NCBI BLink). & (reliability: 604.0) &  (original description: no original description)","protein_coding"
"PSME_00001700-RA","No alias","Pseudotsuga menziesii","(at1g13580 : 377.0) LAG1 longevity assurance homolog 3 (LAG13); CONTAINS InterPro DOMAIN/s: Longevity assurance, LAG1/LAC1 (InterPro:IPR016439), TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein (TAIR:AT3G25540.1). & (q6eun0|ascl1_orysa : 367.0) ASC1-like protein 1 (Alternaria stem canker resistance-like protein 1) - Oryza sativa (Rice) & (reliability: 754.0) &  (original description: no original description)","protein_coding"
"PSME_00002164-RA","No alias","Pseudotsuga menziesii","(at1g14030 : 388.0) Rubisco methyltransferase family protein; FUNCTIONS IN: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rubisco methyltransferase (InterPro:IPR011192), SET domain (InterPro:IPR001214), Rubisco LSMT substrate-binding (InterPro:IPR015353); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT3G07670.1); Has 1278 Blast hits to 1271 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 262; Fungi - 348; Plants - 463; Viruses - 0; Other Eukaryotes - 205 (source: NCBI BLink). & (p94026|rbcmt_tobac : 373.0) Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplast precursor (EC 2.1.1.127) ([Ribulose-bisphosphate carboxylase]-lysine N-methyltransferase) (RuBisCO methyltransferase) (RuBisCO LSMT) (rbcMT) & (reliability: 776.0) &  (original description: no original description)","protein_coding"
"PSME_00002475-RA","No alias","Pseudotsuga menziesii","(p30361|ucria_tobac : 289.0) Cytochrome b6-f complex iron-sulfur subunit 1, chloroplast precursor (EC 1.10.99.1) (Rieske iron-sulfur protein 1) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein 1) (ISP 1) (RISP 1) - Nicotiana tabacum (Common toba & (at4g03280 : 277.0) Encodes the Rieske FeS center of cytochrome b6f complex. Gene is expressed in shoot but not in root. Mutant has reduced electron transport at saturating light intensities and Q-cycle activity is hypersensitive to acidification of the thylakoid lumen.; photosynthetic electron transfer C (PETC); FUNCTIONS IN: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity; INVOLVED IN: response to karrikin, defense response to bacterium, photosynthetic electron transport in cytochrome b6/f, nonphotochemical quenching; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941), Rieske iron-sulphur protein, C-terminal (InterPro:IPR005805), Cytochrome b6-f complex Fe-S subunit (InterPro:IPR014909), Rieske iron-sulphur protein (InterPro:IPR014349); BEST Arabidopsis thaliana protein match is: Ubiquinol-cytochrome C reductase iron-sulfur subunit (TAIR:AT5G13430.1); Has 5376 Blast hits to 5368 proteins in 1325 species: Archae - 24; Bacteria - 2829; Metazoa - 295; Fungi - 164; Plants - 410; Viruses - 0; Other Eukaryotes - 1654 (source: NCBI BLink). & (reliability: 554.0) &  (original description: no original description)","protein_coding"
"PSME_00002992-RA","No alias","Pseudotsuga menziesii","(o24473|if2b_wheat : 367.0) Eukaryotic translation initiation factor 2 subunit beta (eIF-2-beta) (P38) - Triticum aestivum (Wheat) & (at5g20920 : 360.0) protein synthesis initiation factor eIF2 beta; eukaryotic translation initiation factor 2 beta subunit (EIF2 BETA); FUNCTIONS IN: protein binding, translation initiation factor activity; INVOLVED IN: translational initiation, embryo development ending in seed dormancy; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor IF2/IF5, N-terminal (InterPro:IPR016189), Translation initiation factor IF2/IF5, zinc-binding (InterPro:IPR016190), Translation initiation factor IF2/IF5 (InterPro:IPR002735); BEST Arabidopsis thaliana protein match is: Translation initiation factor IF2/IF5 (TAIR:AT3G07920.1); Has 1323 Blast hits to 1320 proteins in 358 species: Archae - 271; Bacteria - 0; Metazoa - 350; Fungi - 277; Plants - 186; Viruses - 4; Other Eukaryotes - 235 (source: NCBI BLink). & (reliability: 720.0) &  (original description: no original description)","protein_coding"
"PSME_00002993-RA","No alias","Pseudotsuga menziesii","(at5g20920 : 345.0) protein synthesis initiation factor eIF2 beta; eukaryotic translation initiation factor 2 beta subunit (EIF2 BETA); FUNCTIONS IN: protein binding, translation initiation factor activity; INVOLVED IN: translational initiation, embryo development ending in seed dormancy; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor IF2/IF5, N-terminal (InterPro:IPR016189), Translation initiation factor IF2/IF5, zinc-binding (InterPro:IPR016190), Translation initiation factor IF2/IF5 (InterPro:IPR002735); BEST Arabidopsis thaliana protein match is: Translation initiation factor IF2/IF5 (TAIR:AT3G07920.1); Has 1323 Blast hits to 1320 proteins in 358 species: Archae - 271; Bacteria - 0; Metazoa - 350; Fungi - 277; Plants - 186; Viruses - 4; Other Eukaryotes - 235 (source: NCBI BLink). & (o24473|if2b_wheat : 334.0) Eukaryotic translation initiation factor 2 subunit beta (eIF-2-beta) (P38) - Triticum aestivum (Wheat) & (reliability: 690.0) &  (original description: no original description)","protein_coding"
"PSME_00003695-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00003696-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00004173-RA","No alias","Pseudotsuga menziesii","(at5g04440 : 121.0) Protein of unknown function (DUF1997); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1997 (InterPro:IPR018971); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1997) (TAIR:AT4G31115.1); Has 266 Blast hits to 266 proteins in 73 species: Archae - 0; Bacteria - 111; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). & (reliability: 242.0) &  (original description: no original description)","protein_coding"
"PSME_00004849-RA","No alias","Pseudotsuga menziesii","(at4g12790 : 347.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleotide binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function, ATP binding (InterPro:IPR004130); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G22370.2); Has 1465 Blast hits to 1454 proteins in 282 species: Archae - 123; Bacteria - 0; Metazoa - 415; Fungi - 412; Plants - 158; Viruses - 0; Other Eukaryotes - 357 (source: NCBI BLink). & (reliability: 694.0) &  (original description: no original description)","protein_coding"
"PSME_00004931-RA","No alias","Pseudotsuga menziesii","(at1g30070 : 247.0) SGS domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Siah interacting protein, N-terminal (InterPro:IPR015120), CS-like domain (InterPro:IPR007052), SGS (InterPro:IPR007699), HSP20-like chaperone (InterPro:IPR008978), CS domain (InterPro:IPR017447); BEST Arabidopsis thaliana protein match is: COP1-interacting protein-related (TAIR:AT1G30060.1). & (reliability: 494.0) &  (original description: no original description)","protein_coding"
"PSME_00005061-RA","No alias","Pseudotsuga menziesii","(at3g24495 : 349.0) encodes a DNA mismatch repair homolog of human MutS gene, MSH6. There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2*MSH7 exhibit moderate affinity for a (T/G) substrate and weak binding of (+T), suggesting MSH2*MSH7 may be specialized for lesions/base mispairs not tested or for (T/G) mispairs in special contexts.; MUTS homolog 7 (MSH7); FUNCTIONS IN: damaged DNA binding, mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein MutS, connector (InterPro:IPR007860), DNA mismatch repair protein MutS, N-terminal (InterPro:IPR016151), DNA mismatch repair protein MutS, core (InterPro:IPR007696), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS-homologue MSH6 (InterPro:IPR015536), DNA mismatch repair protein MutS-like, N-terminal (InterPro:IPR007695); BEST Arabidopsis thaliana protein match is: MUTS homolog 6 (TAIR:AT4G02070.2); Has 17871 Blast hits to 13835 proteins in 2667 species: Archae - 197; Bacteria - 11731; Metazoa - 1028; Fungi - 1274; Plants - 566; Viruses - 3; Other Eukaryotes - 3072 (source: NCBI BLink). & (q9xgc9|msh2_maize : 155.0) DNA mismatch repair protein MSH2 (MUS1) - Zea mays (Maize) & (reliability: 698.0) &  (original description: no original description)","protein_coding"
"PSME_00005897-RA","No alias","Pseudotsuga menziesii","(at1g66070 : 166.0) Translation initiation factor eIF3 subunit; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor eIF3 subunit (InterPro:IPR013906); BEST Arabidopsis thaliana protein match is: Translation initiation factor eIF3 subunit (TAIR:AT5G37475.1). & (reliability: 332.0) &  (original description: no original description)","protein_coding"
"PSME_00006428-RA","No alias","Pseudotsuga menziesii","(at1g68300 : 86.3) Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G11930.4); Has 7821 Blast hits to 7529 proteins in 1691 species: Archae - 688; Bacteria - 6019; Metazoa - 129; Fungi - 89; Plants - 708; Viruses - 0; Other Eukaryotes - 188 (source: NCBI BLink). & (reliability: 168.0) &  (original description: no original description)","protein_coding"
"PSME_00007587-RA","No alias","Pseudotsuga menziesii","(at1g60690 : 348.0) NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity, aldo-keto reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: plasma membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G60710.1); Has 30326 Blast hits to 30300 proteins in 2568 species: Archae - 659; Bacteria - 20203; Metazoa - 1608; Fungi - 2287; Plants - 1265; Viruses - 0; Other Eukaryotes - 4304 (source: NCBI BLink). & (p40691|a115_tobac : 333.0) Auxin-induced protein PCNT115 - Nicotiana tabacum (Common tobacco) & (reliability: 696.0) &  (original description: no original description)","protein_coding"
"PSME_00007974-RA","No alias","Pseudotsuga menziesii","(at2g28060 : 119.0) 5'-AMP-activated protein kinase beta-2 subunit protein; CONTAINS InterPro DOMAIN/s: 5-AMP-activated protein kinase, beta subunit, interaction domain (InterPro:IPR006828); BEST Arabidopsis thaliana protein match is: 5'-AMP-activated protein kinase beta-2 subunit protein (TAIR:AT5G21170.2); Has 379 Blast hits to 379 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 199; Fungi - 21; Plants - 141; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). & (reliability: 238.0) &  (original description: no original description)","protein_coding"
"PSME_00008053-RA","No alias","Pseudotsuga menziesii","(at1g09815 : 81.6) polymerase delta 4 (POLD4); FUNCTIONS IN: DNA-directed DNA polymerase activity; INVOLVED IN: DNA replication; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase delta, subunit 4 (InterPro:IPR007218); Has 212 Blast hits to 212 proteins in 91 species: Archae - 0; Bacteria - 0; Metazoa - 52; Fungi - 86; Plants - 65; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). & (reliability: 163.2) &  (original description: no original description)","protein_coding"
"PSME_00008395-RA","No alias","Pseudotsuga menziesii","(at1g65910 : 154.0) NAC domain containing protein 28 (NAC028); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 86 (TAIR:AT5G17260.1); Has 3059 Blast hits to 3053 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 3044; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). & (q7gcl7|nac74_orysa : 123.0) NAC domain-containing protein 74 (ONAC074) - Oryza sativa (Rice) & (reliability: 308.0) &  (original description: no original description)","protein_coding"
"PSME_00008734-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00009309-RA","No alias","Pseudotsuga menziesii","(at3g46460 : 234.0) ubiquitin-conjugating enzyme 13 (UBC13); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin carrier protein 7 (TAIR:AT5G59300.1); Has 10290 Blast hits to 10255 proteins in 396 species: Archae - 0; Bacteria - 0; Metazoa - 4390; Fungi - 2251; Plants - 1992; Viruses - 23; Other Eukaryotes - 1634 (source: NCBI BLink). & (p25868|ubc7_wheat : 218.0) Ubiquitin-conjugating enzyme E2 7 (EC 6.3.2.19) (Ubiquitin-protein ligase 7) (Ubiquitin carrier protein 7) - Triticum aestivum (Wheat) & (reliability: 468.0) &  (original description: no original description)","protein_coding"
"PSME_00009958-RA","No alias","Pseudotsuga menziesii","(at5g23550 : 184.0) Got1/Sft2-like vescicle transport protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: vesicle-mediated transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vesicle transport protein, Got1/SFT2-like (InterPro:IPR007305), Vesicle transport protein, SFT2-like (InterPro:IPR011691); BEST Arabidopsis thaliana protein match is: Got1/Sft2-like vescicle transport protein family (TAIR:AT5G24170.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 368.0) &  (original description: no original description)","protein_coding"
"PSME_00010092-RA","No alias","Pseudotsuga menziesii","(q84mp7|h2av3_orysa : 141.0) Probable histone H2A variant 3 - Oryza sativa (Rice) & (at1g52740 : 137.0) Encodes HTA9, a histone H2A protein.; histone H2A protein 9 (HTA9); FUNCTIONS IN: DNA binding; INVOLVED IN: detection of temperature stimulus, defense response to bacterium, regulation of flower development; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2A (InterPro:IPR002119), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: histone H2A 11 (TAIR:AT3G54560.1); Has 3910 Blast hits to 3905 proteins in 353 species: Archae - 0; Bacteria - 0; Metazoa - 2573; Fungi - 292; Plants - 612; Viruses - 4; Other Eukaryotes - 429 (source: NCBI BLink). & (reliability: 274.0) &  (original description: no original description)","protein_coding"
"PSME_00010320-RA","No alias","Pseudotsuga menziesii","(at4g24900 : 128.0) unknown protein; Has 119 Blast hits to 96 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 81; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 256.0) &  (original description: no original description)","protein_coding"
"PSME_00010934-RA","No alias","Pseudotsuga menziesii","(at2g15790 : 553.0) SQN encodes the Arabidopsis homolog of cyclophilin 40 (CyP40). It is  specifically required for the vegetative but not the reproductive  maturation of the shoot.; SQUINT (SQN); CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide TPR2 (InterPro:IPR013105), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT3G63400.3); Has 20219 Blast hits to 19939 proteins in 2706 species: Archae - 114; Bacteria - 6925; Metazoa - 4764; Fungi - 1760; Plants - 1912; Viruses - 4; Other Eukaryotes - 4740 (source: NCBI BLink). & (p24525|cyph_brana : 223.0) Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) - Brassica napus (Rape) & (reliability: 1106.0) &  (original description: no original description)","protein_coding"
"PSME_00011425-RA","No alias","Pseudotsuga menziesii","(at1g17280 : 335.0) ubiquitin-conjugating enzyme 34 (UBC34); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 33 (TAIR:AT5G50430.2); Has 7599 Blast hits to 7596 proteins in 375 species: Archae - 0; Bacteria - 0; Metazoa - 3285; Fungi - 1587; Plants - 1489; Viruses - 20; Other Eukaryotes - 1218 (source: NCBI BLink). & (reliability: 670.0) &  (original description: no original description)","protein_coding"
"PSME_00011579-RA","No alias","Pseudotsuga menziesii","(p82192|rk5_spiol : 141.0) 50S ribosomal protein L5, chloroplast - Spinacia oleracea (Spinach) & (at4g01310 : 137.0) Ribosomal L5P family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L5 (InterPro:IPR002132), Ribosomal protein L5, conserved site (InterPro:IPR020929), Ribosomal protein L5, C-terminal (InterPro:IPR020928), Ribosomal protein L5, N-terminal (InterPro:IPR020927); Has 9219 Blast hits to 9219 proteins in 3016 species: Archae - 312; Bacteria - 5408; Metazoa - 222; Fungi - 280; Plants - 343; Viruses - 0; Other Eukaryotes - 2654 (source: NCBI BLink). & (reliability: 274.0) &  (original description: no original description)","protein_coding"
"PSME_00011681-RA","No alias","Pseudotsuga menziesii","(at1g72440 : 167.0) Encodes SLOW WALKER2 (SWA2), a NOC1/Mak21 homologue.  Essential for coordinated cell cycle progression during female gametophyte development.; embryo sac development arrest 25 (EDA25); INVOLVED IN: polar nucleus fusion, embryo sac development; LOCATED IN: nucleolus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCAAT-binding factor (InterPro:IPR005612); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 334.0) &  (original description: no original description)","protein_coding"
"PSME_00011938-RA","No alias","Pseudotsuga menziesii","(at1g49820 : 293.0) encodes 5-methylthioribose kinase, involved in methionine cycle; S-methyl-5-thioribose kinase (MTK); CONTAINS InterPro DOMAIN/s: Methylthioribose kinase (InterPro:IPR009212), Aminoglycoside phosphotransferase (InterPro:IPR002575), Protein kinase-like domain (InterPro:IPR011009); Has 954 Blast hits to 954 proteins in 299 species: Archae - 0; Bacteria - 750; Metazoa - 4; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 137 (source: NCBI BLink). & (reliability: 586.0) &  (original description: no original description)","protein_coding"
"PSME_00012116-RA","No alias","Pseudotsuga menziesii","(at1g11870 : 416.0) Seryl-tRNA synthetase targeted to chloroplasts and mitochondria. Its inactivation causes developmental arrest of chloroplasts and mitochondria in Nicotiana benthamiana.; Seryl-tRNA synthetase (SRS); FUNCTIONS IN: serine-tRNA ligase activity; INVOLVED IN: chloroplast organization, mitochondrion organization, seryl-tRNA aminoacylation, tRNA aminoacylation, ovule development; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA-binding arm (InterPro:IPR010978), Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Seryl-tRNA synthetase, class IIa, N-terminal (InterPro:IPR015866), Seryl-tRNA synthetase, class IIa (InterPro:IPR002317), Ubiquitin supergroup (InterPro:IPR019955), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Seryl-tRNA synthetase, class IIa, C-terminal (InterPro:IPR018156); BEST Arabidopsis thaliana protein match is: seryl-tRNA synthetase / serine--tRNA ligase (TAIR:AT5G27470.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (o81983|sys_helan : 184.0) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase) (SerRS) - Helianthus annuus (Common sunflower) & (reliability: 832.0) &  (original description: no original description)","protein_coding"
"PSME_00013297-RA","No alias","Pseudotsuga menziesii","(at4g16710 : 180.0) glycosyltransferase family protein 28; FUNCTIONS IN: carbohydrate binding, transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: lipid glycosylation, biosynthetic process, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 28, C-terminal (InterPro:IPR007235); Has 643 Blast hits to 638 proteins in 315 species: Archae - 10; Bacteria - 244; Metazoa - 125; Fungi - 122; Plants - 50; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). & (reliability: 360.0) &  (original description: no original description)","protein_coding"
"PSME_00014314-RA","No alias","Pseudotsuga menziesii","(at5g53140 : 391.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C,  manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G10740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 782.0) &  (original description: no original description)","protein_coding"
"PSME_00014405-RA","No alias","Pseudotsuga menziesii","(q8s5m8|yipl_orysa : 115.0) Putative yippee-like protein Os10g0369500 - Oryza sativa (Rice) & (at4g27745 : 94.4) Yippee family putative zinc-binding protein; CONTAINS InterPro DOMAIN/s: Yippee-like protein (InterPro:IPR004910); BEST Arabidopsis thaliana protein match is: Yippee family putative zinc-binding protein (TAIR:AT5G53940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 172.6) &  (original description: no original description)","protein_coding"
"PSME_00014995-RA","No alias","Pseudotsuga menziesii","(at5g47100 : 313.0) member of AtCBLs (Calcineurin B-like Calcium Sensor Proteins. CBL9 interacts with and targets CIPK23 to the plasma membrane in vivo.; calcineurin B-like protein 9 (CBL9); FUNCTIONS IN: calcium ion binding; INVOLVED IN: response to water deprivation, N-terminal protein myristoylation, potassium ion import, stomatal movement, response to stress; LOCATED IN: plasma membrane, protein serine/threonine phosphatase complex, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), Recoverin (InterPro:IPR001125), EF-HAND 2 (InterPro:IPR018249), Calcineurin B protein (InterPro:IPR015757), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: calcineurin B-like protein 1 (TAIR:AT4G17615.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 626.0) &  (original description: no original description)","protein_coding"
"PSME_00015863-RA","No alias","Pseudotsuga menziesii","(at2g23840 : 204.0) HNH endonuclease; FUNCTIONS IN: endonuclease activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HNH nuclease (InterPro:IPR003615), HNH endonuclease (InterPro:IPR002711); Has 4176 Blast hits to 4176 proteins in 656 species: Archae - 6; Bacteria - 1679; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 29; Other Eukaryotes - 2425 (source: NCBI BLink). & (reliability: 408.0) &  (original description: no original description)","protein_coding"
"PSME_00017169-RA","No alias","Pseudotsuga menziesii","(at5g67590 : 172.0) Mutant leaves have a reduced capacity for cold acclimation, appear water-soaked, leak electrolytes, and accumulate reactive oxygen species constitutively. Encode a protein with high similarity to the 18-kD Fe-S subunit of complex I (NADH dehydrogenase, EC 1.6.5.3) in the mitochondrial electron transfer chain.; FROSTBITE1 (FRO1); CONTAINS InterPro DOMAIN/s: ETC complex I subunit conserved region (InterPro:IPR006885); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 344.0) &  (original description: no original description)","protein_coding"
"PSME_00018192-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00018387-RA","No alias","Pseudotsuga menziesii","(at5g55990 : 201.0) Encodes a member of the Arabidopsis CBL (Calcineurin B-like Calcium Sensor) protein family.; calcineurin B-like protein 2 (CBL2); FUNCTIONS IN: calcium ion binding; INVOLVED IN: calcium-mediated signaling; LOCATED IN: cytosolic ribosome, plant-type vacuole membrane, vacuole, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Recoverin (InterPro:IPR001125), EF-HAND 2 (InterPro:IPR018249), Calcineurin B protein (InterPro:IPR015757), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: calcineurin B-like 3 (TAIR:AT4G26570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 402.0) &  (original description: no original description)","protein_coding"
"PSME_00019388-RA","No alias","Pseudotsuga menziesii","(at3g12390 : 186.0) Nascent polypeptide-associated complex (NAC), alpha subunit family protein; INVOLVED IN: response to salt stress; LOCATED IN: cytosolic ribosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Nascent polypeptide-associated complex, alpha subunit (InterPro:IPR016641), Nascent polypeptide-associated complex NAC (InterPro:IPR002715); BEST Arabidopsis thaliana protein match is: nascent polypeptide-associated complex subunit alpha-like protein 3 (TAIR:AT5G13850.1); Has 5275 Blast hits to 2514 proteins in 367 species: Archae - 69; Bacteria - 684; Metazoa - 1880; Fungi - 785; Plants - 552; Viruses - 60; Other Eukaryotes - 1245 (source: NCBI BLink). & (reliability: 372.0) &  (original description: no original description)","protein_coding"
"PSME_00021809-RA","No alias","Pseudotsuga menziesii","(at5g60340 : 157.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: oxidoreductase activity, ATP binding; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible, C globular stage, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 314.0) &  (original description: no original description)","protein_coding"
"PSME_00021988-RA","No alias","Pseudotsuga menziesii","(at3g04400 : 260.0) embryo defective 2171 (emb2171); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, embryo development ending in seed dormancy; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L14b/L23e (InterPro:IPR000218), Ribosomal protein L14 conserved site (InterPro:IPR019972); BEST Arabidopsis thaliana protein match is: Ribosomal protein L14p/L23e family protein (TAIR:AT2G33370.1). & (q07760|rl23_tobac : 260.0) 60S ribosomal protein L23 - Nicotiana tabacum (Common tobacco) & (reliability: 520.0) &  (original description: no original description)","protein_coding"
"PSME_00022311-RA","No alias","Pseudotsuga menziesii","(at3g11470 : 225.0) 4'-phosphopantetheinyl transferase superfamily; FUNCTIONS IN: holo-[acyl-carrier-protein] synthase activity, magnesium ion binding, transferase activity; INVOLVED IN: metabolic process, macromolecule biosynthetic process; CONTAINS InterPro DOMAIN/s: 4&apos;-phosphopantetheinyl transferase (InterPro:IPR008278); BEST Arabidopsis thaliana protein match is: 4'-phosphopantetheinyl transferase superfamily (TAIR:AT2G02770.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 450.0) &  (original description: no original description)","protein_coding"
"PSME_00022573-RA","No alias","Pseudotsuga menziesii","(at3g18390 : 286.0) embryo defective 1865 (EMB1865); FUNCTIONS IN: RNA binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: CRM family member 3B (TAIR:AT4G14510.1); Has 1281 Blast hits to 1142 proteins in 135 species: Archae - 11; Bacteria - 10; Metazoa - 285; Fungi - 118; Plants - 447; Viruses - 43; Other Eukaryotes - 367 (source: NCBI BLink). & (reliability: 572.0) &  (original description: no original description)","protein_coding"
"PSME_00023298-RA","No alias","Pseudotsuga menziesii","(at1g71696 : 378.0) Encodes a Putative Zn2+ carboxypeptidase, 4 splice variants have been identified but not characterized for different functions and/or expression patterns.SOL1 isolated as a suppressor of root- specific overexpression of CLE19, a clavata3 like gene. sol1 partially suppresses the short root phenotype caused  by CLE19 overexpression.; SUPPRESSOR OF LLP1 1 (SOL1); FUNCTIONS IN: metallocarboxypeptidase activity, carboxypeptidase activity, zinc ion binding; INVOLVED IN: regulation of root meristem growth; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Carboxypeptidase-like, regulatory domain (InterPro:IPR008969), Peptidase M14, carboxypeptidase A (InterPro:IPR000834), Carboxypeptidase, regulatory domain (InterPro:IPR014766); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 756.0) &  (original description: no original description)","protein_coding"
"PSME_00023315-RA","No alias","Pseudotsuga menziesii","(at1g12520 : 92.4) Copper/zinc superoxide dismutase copper chaperone. Localized to the chloroplast. Expressed in roots and shoots. Up-regulated in response to copper and senescence. The AtACC activates all three CuZnSOD activities located in three different subcellular compartments.  Contains three domains, central, ATX-1 like and C-terminal. ATX-1 like domain essential for the copper chaperone function of AtCCS in planta.; copper chaperone for SOD1 (CCS); FUNCTIONS IN: superoxide dismutase copper chaperone activity, superoxide dismutase activity; INVOLVED IN: cellular copper ion homeostasis; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Superoxide dismutase, copper/zinc binding (InterPro:IPR001424); BEST Arabidopsis thaliana protein match is: copper/zinc superoxide dismutase 2 (TAIR:AT2G28190.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 184.8) &  (original description: no original description)","protein_coding"
"PSME_00025254-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00025419-RA","No alias","Pseudotsuga menziesii","(at1g55300 : 140.0) TBP-associated factor 7 (TAF7); FUNCTIONS IN: general RNA polymerase II transcription factor activity; INVOLVED IN: transcription initiation from RNA polymerase II promoter; LOCATED IN: transcription factor TFIID complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TAFII55 protein, conserved region (InterPro:IPR006751); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 280.0) &  (original description: no original description)","protein_coding"
"PSME_00026053-RA","No alias","Pseudotsuga menziesii","(at5g57800 : 169.0) encodes a transmembrane protein with similarity to the sterol desaturase family at the N-terminus and to the short-chain dehydrogenase/reductase family at the C-terminus. Mutant analyses indicate this protein is involved in cuticle membrane and wax biosynthesis.; ECERIFERUM 3 (CER3); FUNCTIONS IN: oxidoreductase activity, binding, iron ion binding, catalytic activity; INVOLVED IN: cuticle hydrocarbon biosynthetic process, response to salt stress, pollen sperm cell differentiation, wax biosynthetic process, cuticle development; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Fatty acid hydroxylase (InterPro:IPR006694), Uncharacterised protein, Wax2 C-terminal (InterPro:IPR021940); BEST Arabidopsis thaliana protein match is: Fatty acid hydroxylase superfamily (TAIR:AT1G02205.2); Has 879 Blast hits to 877 proteins in 232 species: Archae - 0; Bacteria - 279; Metazoa - 24; Fungi - 149; Plants - 340; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (reliability: 338.0) &  (original description: no original description)","protein_coding"
"PSME_00026797-RA","No alias","Pseudotsuga menziesii","(at2g17705 : 185.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G08330.1); Has 135 Blast hits to 135 proteins in 32 species: Archae - 5; Bacteria - 29; Metazoa - 0; Fungi - 0; Plants - 91; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 370.0) &  (original description: no original description)","protein_coding"
"PSME_00026814-RA","No alias","Pseudotsuga menziesii","(at4g38495 : 138.0) CONTAINS InterPro DOMAIN/s: YL1 nuclear, C-terminal (InterPro:IPR013272); Has 279 Blast hits to 279 proteins in 147 species: Archae - 0; Bacteria - 0; Metazoa - 94; Fungi - 133; Plants - 35; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 276.0) &  (original description: no original description)","protein_coding"
"PSME_00028200-RA","No alias","Pseudotsuga menziesii","(at3g03740 : 193.0) BTB-POZ and MATH domain 4 (BPM4); CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083), BTB/POZ fold (InterPro:IPR011333), BTB/POZ (InterPro:IPR013069), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: BTB-POZ and MATH domain 5 (TAIR:AT5G21010.1); Has 5789 Blast hits to 5682 proteins in 201 species: Archae - 0; Bacteria - 0; Metazoa - 3860; Fungi - 138; Plants - 1466; Viruses - 48; Other Eukaryotes - 277 (source: NCBI BLink). & (reliability: 362.0) &  (original description: no original description)","protein_coding"
"PSME_00030925-RA","No alias","Pseudotsuga menziesii","(at4g32520 : 209.0) Encodes a serine hydroxymethyltransferase SHMT3 located in the plastid.; serine hydroxymethyltransferase 3 (SHM3); FUNCTIONS IN: glycine hydroxymethyltransferase activity; INVOLVED IN: glycine metabolic process, L-serine metabolic process; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Serine hydroxymethyltransferase, pyridoxal phosphate binding site (InterPro:IPR019798), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Serine hydroxymethyltransferase (InterPro:IPR001085); BEST Arabidopsis thaliana protein match is: serine transhydroxymethyltransferase 1 (TAIR:AT4G37930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p49358|glyn_flapr : 168.0) Serine hydroxymethyltransferase 2, mitochondrial precursor (EC 2.1.2.1) (Serine methylase) (Glycine hydroxymethyltransferase) (SHMT) - Flaveria pringlei & (reliability: 418.0) &  (original description: no original description)","protein_coding"
"PSME_00032241-RA","No alias","Pseudotsuga menziesii","(at3g12740 : 89.4) Physically interacts with ALA3, and is required for the phospholipid translocase activity of ALA3.; ALA-interacting subunit 1 (ALIS1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF284, transmembrane eukaryotic (InterPro:IPR005045); BEST Arabidopsis thaliana protein match is: LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein (TAIR:AT1G54320.1); Has 864 Blast hits to 864 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 252; Fungi - 234; Plants - 160; Viruses - 0; Other Eukaryotes - 218 (source: NCBI BLink). & (reliability: 178.8) &  (original description: no original description)","protein_coding"
"PSME_00032338-RA","No alias","Pseudotsuga menziesii","(at1g44170 : 189.0) Encodes a protein similar to the aldehyde dehydrogenase cp-ADH from C.plantagineum. Constitutively expressed at low levels.; aldehyde dehydrogenase 3H1 (ALDH3H1); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, aldehyde dehydrogenase (NAD) activity; INVOLVED IN: response to desiccation, response to salt stress, response to abscisic acid stimulus; LOCATED IN: endoplasmic reticulum, plastid, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase NAD(P)-dependent (InterPro:IPR012394), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 3I1 (TAIR:AT4G34240.1); Has 53834 Blast hits to 53786 proteins in 2931 species: Archae - 469; Bacteria - 32921; Metazoa - 2418; Fungi - 2071; Plants - 990; Viruses - 0; Other Eukaryotes - 14965 (source: NCBI BLink). & (reliability: 378.0) &  (original description: no original description)","protein_coding"
"PSME_00032441-RA","No alias","Pseudotsuga menziesii","(at5g16150 : 119.0) Encodes a putative plastidic glucose transporter.; plastidic GLC translocator (PGLCT); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: response to trehalose stimulus; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G05030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 238.0) &  (original description: no original description)","protein_coding"
"PSME_00032443-RA","No alias","Pseudotsuga menziesii","(at5g39890 : 179.0) Protein of unknown function (DUF1637); FUNCTIONS IN: cysteamine dioxygenase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1637 (InterPro:IPR012864); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1637) (TAIR:AT5G15120.1); Has 361 Blast hits to 361 proteins in 93 species: Archae - 0; Bacteria - 0; Metazoa - 102; Fungi - 0; Plants - 224; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 358.0) &  (original description: no original description)","protein_coding"
"PSME_00033404-RA","No alias","Pseudotsuga menziesii","(at3g56830 : 141.0) Similar in sequence to NPQ6 and NPQ7, but loss of function mutant does not exhibit a nonphotochemical quenching phenotype.; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF565 (InterPro:IPR007572); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF565) (TAIR:AT1G65420.1); Has 154 Blast hits to 154 proteins in 43 species: Archae - 0; Bacteria - 27; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). & (q9mul5|ycf20_mesvi : 89.4) Hypothetical 13.0 kDa protein ycf20 (RF20) - Mesostigma viride & (reliability: 282.0) &  (original description: no original description)","protein_coding"
"PSME_00033920-RA","No alias","Pseudotsuga menziesii","(at1g49590 : 135.0) C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, U1-C type (InterPro:IPR013085), Zinc finger, U1-type (InterPro:IPR003604), Zinc finger, C2H2-type matrin (InterPro:IPR000690). & (reliability: 270.0) &  (original description: no original description)","protein_coding"
"PSME_00034654-RA","No alias","Pseudotsuga menziesii",""(at2g46950 : 456.0) member of CYP709B; ""cytochrome P450, family 709, subfamily B, polypeptide 2"" (CYP709B2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 709, subfamily B, polypeptide 3 (TAIR:AT4G27710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q05047|c72a1_catro : 377.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 912.0) &  (original description: no original description)"","protein_coding"
"PSME_00035171-RA","No alias","Pseudotsuga menziesii","(at5g26667 : 295.0) encodes a uridine 5'-monophosphate (UMP)/cytidine 5'-monophosphate (CMP) kinase.; PYR6; FUNCTIONS IN: uridylate kinase activity, cytidylate kinase activity; INVOLVED IN: pyrimidine ribonucleoside monophosphate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, cultured cell; EXPRESSED DURING: seed development stages; CONTAINS InterPro DOMAIN/s: UMP-CMP kinase (InterPro:IPR006266), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G60180.1); Has 14097 Blast hits to 13900 proteins in 4949 species: Archae - 110; Bacteria - 9093; Metazoa - 1254; Fungi - 484; Plants - 467; Viruses - 0; Other Eukaryotes - 2689 (source: NCBI BLink). & (p43188|kadc_maize : 101.0) Adenylate kinase, chloroplast (EC 2.7.4.3) (ATP-AMP transphosphorylase) - Zea mays (Maize) & (reliability: 590.0) &  (original description: no original description)","protein_coding"
"PSME_00035349-RA","No alias","Pseudotsuga menziesii","(at5g58640 : 228.0) Selenoprotein, Rdx type; FUNCTIONS IN: selenium binding; INVOLVED IN: cell redox homeostasis; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Selenoprotein T (InterPro:IPR019389), Selenoprotein, Rdx type (InterPro:IPR011893); BEST Arabidopsis thaliana protein match is: SELT-like protein precursor (TAIR:AT3G47300.1); Has 232 Blast hits to 232 proteins in 70 species: Archae - 0; Bacteria - 0; Metazoa - 137; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). & (reliability: 456.0) &  (original description: no original description)","protein_coding"
"PSME_00035559-RA","No alias","Pseudotsuga menziesii","(at1g09330 : 292.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF846, eukaryotic (InterPro:IPR008564); Has 518 Blast hits to 518 proteins in 206 species: Archae - 0; Bacteria - 0; Metazoa - 193; Fungi - 145; Plants - 73; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). & (reliability: 584.0) &  (original description: no original description)","protein_coding"
"PSME_00035768-RA","No alias","Pseudotsuga menziesii",""(at5g23090 : 237.0) ""nuclear factor Y, subunit B13"" (NF-YB13); CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B12 (TAIR:AT5G08190.2); Has 1502 Blast hits to 1502 proteins in 245 species: Archae - 0; Bacteria - 0; Metazoa - 491; Fungi - 387; Plants - 520; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink). & (reliability: 474.0) &  (original description: no original description)"","protein_coding"
"PSME_00036224-RA","No alias","Pseudotsuga menziesii","(at4g38600 : 165.0) encodes a member of HECT ubiquitin protein ligase family that is involved in trichome cell morphogenesis. Mutants in this gene exhibit supernumerary trichome branches and increased DNA content.; KAKTUS (KAK); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: trichome branching, DNA endoreduplication; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024), HECT (InterPro:IPR000569); BEST Arabidopsis thaliana protein match is: ubiquitin-protein ligase 4 (TAIR:AT5G02880.1); Has 6273 Blast hits to 5534 proteins in 324 species: Archae - 2; Bacteria - 240; Metazoa - 3391; Fungi - 909; Plants - 600; Viruses - 3; Other Eukaryotes - 1128 (source: NCBI BLink). & (reliability: 330.0) &  (original description: no original description)","protein_coding"
"PSME_00037847-RA","No alias","Pseudotsuga menziesii","(at3g21690 : 452.0) MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT1G61890.1); Has 11325 Blast hits to 11232 proteins in 2038 species: Archae - 269; Bacteria - 8227; Metazoa - 142; Fungi - 332; Plants - 1357; Viruses - 0; Other Eukaryotes - 998 (source: NCBI BLink). & (reliability: 904.0) &  (original description: no original description)","protein_coding"
"PSME_00039953-RA","No alias","Pseudotsuga menziesii","(p40392|ric1_orysa : 267.0) Ras-related protein RIC1 - Oryza sativa (Rice) & (at1g02130 : 265.0) Belongs to the Rab1 GTPase subfamily. This small GTP-binding protein is required in ER to Golgi transportation.; RAS 5 (RA-5); FUNCTIONS IN: GTP binding; INVOLVED IN: response to cadmium ion, ER to Golgi vesicle-mediated transport; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog 1A (TAIR:AT5G47200.1); Has 30420 Blast hits to 30350 proteins in 816 species: Archae - 27; Bacteria - 199; Metazoa - 15882; Fungi - 4318; Plants - 3658; Viruses - 20; Other Eukaryotes - 6316 (source: NCBI BLink). & (reliability: 530.0) &  (original description: no original description)","protein_coding"
"PSME_00040767-RA","No alias","Pseudotsuga menziesii","(at2g01250 : 333.0) Ribosomal protein L30/L7 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic large ribosomal subunit, chloroplast, plasma membrane, large ribosomal subunit, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L30, N-terminal (InterPro:IPR012988), Ribosomal protein L30p/L7e, conserved region (InterPro:IPR000517), Ribosomal protein L30, conserved site (InterPro:IPR018038), Ribosomal protein L30, ferredoxin-like fold domain (InterPro:IPR016082); BEST Arabidopsis thaliana protein match is: Ribosomal protein L30/L7 family protein (TAIR:AT3G13580.1); Has 1075 Blast hits to 1075 proteins in 310 species: Archae - 55; Bacteria - 0; Metazoa - 442; Fungi - 204; Plants - 182; Viruses - 0; Other Eukaryotes - 192 (source: NCBI BLink). & (reliability: 666.0) &  (original description: no original description)","protein_coding"
"PSME_00041151-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00041426-RA","No alias","Pseudotsuga menziesii","(at2g40760 : 262.0) Rhodanese/Cell cycle control phosphatase superfamily protein; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G09280.1); Has 5729 Blast hits to 5726 proteins in 1464 species: Archae - 2; Bacteria - 2945; Metazoa - 57; Fungi - 3; Plants - 114; Viruses - 0; Other Eukaryotes - 2608 (source: NCBI BLink). & (reliability: 524.0) &  (original description: no original description)","protein_coding"
"PSME_00041589-RA","No alias","Pseudotsuga menziesii","(at3g48820 : 431.0) Encodes a homolog of the animal sialyltransferases but sialyltransferase activity was not detected (Plant Biology 2009, 11:284).  Located in the Golgi apparatus.; Glycosyltransferase family 29 (sialyltransferase) family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, sialyltransferase activity; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: Golgi apparatus, membrane; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 29 (InterPro:IPR001675); BEST Arabidopsis thaliana protein match is: MALE GAMETOPHYTE DEFECTIVE 2 (TAIR:AT1G08660.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 862.0) &  (original description: no original description)","protein_coding"
"PSME_00042712-RA","No alias","Pseudotsuga menziesii","(at5g51940 : 184.0) One of two highly similar proteins that can serve as a non-catalytic subunit of nuclear DNA-dependent RNA polymerases II, IV and V; homologous to budding yeast RPB6 and the E. coli RNA polymerase omega subunit. Probably redundant with At2g04630.; NRPB6A; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription, DNA-dependent; LOCATED IN: DNA-directed RNA polymerase V complex, DNA-directed RNA polymerase II, core complex, DNA-directed RNA polymerase IV complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, 14-18kDa subunit, conserved site (InterPro:IPR020708), RNA polymerase subunit, RPB6/omega (InterPro:IPR012293), RNA polymerase Rpb6 (InterPro:IPR006110), DNA-directed RNA polymerase, 14-18kDa subunit (InterPro:IPR006111); BEST Arabidopsis thaliana protein match is: RNA polymerase Rpb6 (TAIR:AT2G04630.1); Has 907 Blast hits to 906 proteins in 313 species: Archae - 223; Bacteria - 0; Metazoa - 99; Fungi - 194; Plants - 79; Viruses - 16; Other Eukaryotes - 296 (source: NCBI BLink). & (reliability: 368.0) &  (original description: no original description)","protein_coding"
"PSME_00043666-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00044404-RA","No alias","Pseudotsuga menziesii","(at1g55360 : 442.0) Protein of Unknown Function (DUF239); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT3G13510.1); Has 753 Blast hits to 700 proteins in 28 species: Archae - 0; Bacteria - 15; Metazoa - 0; Fungi - 10; Plants - 728; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 858.0) &  (original description: no original description)","protein_coding"
"PSME_00044683-RA","No alias","Pseudotsuga menziesii","(at4g09340 : 166.0) SPla/RYanodine receptor (SPRY) domain-containing protein; CONTAINS InterPro DOMAIN/s: Ran binding protein, CRA domain (InterPro:IPR019589), B302 (SPRY)-like (InterPro:IPR001870), CTLH, C-terminal LisH motif (InterPro:IPR006595), LisH dimerisation motif (InterPro:IPR006594), Ran binding protein-like, CRA domain (InterPro:IPR013144), SPla/RYanodine receptor SPRY (InterPro:IPR003877); BEST Arabidopsis thaliana protein match is: SPla/RYanodine receptor (SPRY) domain-containing protein (TAIR:AT1G35470.2); Has 1270 Blast hits to 1182 proteins in 217 species: Archae - 0; Bacteria - 1; Metazoa - 551; Fungi - 310; Plants - 183; Viruses - 1; Other Eukaryotes - 224 (source: NCBI BLink). & (reliability: 332.0) &  (original description: no original description)","protein_coding"
"PSME_00045625-RA","No alias","Pseudotsuga menziesii","(at3g51140 : 256.0) Protein of unknown function (DUF3353); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3353 (InterPro:IPR021788); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3353) (TAIR:AT5G23040.1); Has 193 Blast hits to 193 proteins in 61 species: Archae - 0; Bacteria - 77; Metazoa - 0; Fungi - 0; Plants - 100; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (reliability: 512.0) &  (original description: no original description)","protein_coding"
"PSME_00045833-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00046440-RA","No alias","Pseudotsuga menziesii","(at5g09250 : 111.0) putative transcriptional co-activator (KIWI) mRNA, complete; KIWI; FUNCTIONS IN: protein binding, transcription coactivator activity, DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ssDNA-binding transcriptional regulator (InterPro:IPR009044), Transcriptional coactivator p15 (InterPro:IPR003173); BEST Arabidopsis thaliana protein match is: ssDNA-binding transcriptional regulator (TAIR:AT5G09240.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 222.0) &  (original description: no original description)","protein_coding"
"PSME_00051825-RA","No alias","Pseudotsuga menziesii","(at4g31010 : 101.0) RNA-binding CRS1 / YhbY (CRM) domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: RNA-binding CRS1 / YhbY (CRM) domain-containing protein (TAIR:AT5G54890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 184.0) &  (original description: no original description)","protein_coding"
"PSME_00052323-RA","No alias","Pseudotsuga menziesii","(at5g21920 : 172.0) YLMG2; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function YGGT (InterPro:IPR003425); BEST Arabidopsis thaliana protein match is: YGGT family protein (TAIR:AT4G27990.1). & (reliability: 344.0) &  (original description: no original description)","protein_coding"
"PSME_00056741-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"Seita.1G003500.1","No alias","Setaria italica ","MADS/AGL-type transcription factor","protein_coding"
"Seita.1G125800.1","No alias","Setaria italica ","CKL protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.1G146200.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G320400.1","No alias","Setaria italica ","EC_2.7 transferase transferring phosphorus-containing group & shikimate kinase","protein_coding"
"Seita.1G365500.1","No alias","Setaria italica ","class XI myosin microfilament-based motor protein","protein_coding"
"Seita.2G004900.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G120900.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G121200.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G164400.1","No alias","Setaria italica ","histone H3K36 methylation reader *(EML)","protein_coding"
"Seita.2G178900.1","No alias","Setaria italica ","class tau glutathione S-transferase","protein_coding"
"Seita.2G215300.1","No alias","Setaria italica ","component *(ARID5) of ISWI chromatin remodeling complex","protein_coding"
"Seita.2G338000.1","No alias","Setaria italica ","assembly factor (eIF1) of eIF1","protein_coding"
"Seita.3G025300.1","No alias","Setaria italica ","UDP-L-arabinose mutase","protein_coding"
"Seita.3G090500.1","No alias","Setaria italica ","bZIP class-G transcription factor","protein_coding"
"Seita.3G180900.1","No alias","Setaria italica ","TUB-type transcription factor","protein_coding"
"Seita.3G243900.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.4G064400.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.4G220300.1","No alias","Setaria italica ","component *(VPS32/SNF7) of ESCRT-III complex","protein_coding"
"Seita.4G291700.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.4G292000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G044400.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G056000.1","No alias","Setaria italica ","ULK protein kinase & protein kinase *(RUK) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.5G097000.1","No alias","Setaria italica ","ATPase component *(VPS4/SKD1) of VPS4-VTA1 ESCRT-disassembly complex & EC_3.6 hydrolase acting on acid anhydride","protein_coding"
"Seita.5G123900.1","No alias","Setaria italica ","brassinosteroid hydroxylase *(CYP72B) & EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen","protein_coding"
"Seita.5G195100.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G432000.1","No alias","Setaria italica ","component *(EXO70) of Exocyst complex","protein_coding"
"Seita.5G433100.1","No alias","Setaria italica ","CAMTA-type transcription factor","protein_coding"
"Seita.6G004400.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.6G026000.1","No alias","Setaria italica ","EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding"
"Seita.6G060700.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.6G090600.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.6G091100.1","No alias","Setaria italica ","phosphopantetheinyl transferase *(mtPPT))","protein_coding"
"Seita.6G091200.1","No alias","Setaria italica ","phosphopantetheinyl transferase *(mtPPT))","protein_coding"
"Seita.6G115500.1","No alias","Setaria italica ","component *(SEC8) of Exocyst complex","protein_coding"
"Seita.6G133500.1","No alias","Setaria italica ","Golgin-type membrane tethering protein *(GC3/GC4)","protein_coding"
"Seita.6G143200.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.6G208200.1","No alias","Setaria italica ","3-hydroxy-3-methylglutaryl-CoA reductase & EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding"
"Seita.6G222700.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.7G237500.1","No alias","Setaria italica ","LRR-VIII-2 protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.7G312700.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.8G016000.1","No alias","Setaria italica ","substrate adaptor of CUL3-based E3 ubiquitin ligase complex","protein_coding"
"Seita.8G021200.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.8G145000.1","No alias","Setaria italica ","component *(MIP1) of DSL1 (Depends-on-SLY1) complex","protein_coding"
"Seita.8G158300.1","No alias","Setaria italica ","regulatory E3 ubiquitin ligase *(RHF)","protein_coding"
"Seita.9G020000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G065200.1","No alias","Setaria italica ","component *(NOT9) of mRNA deadenylation CCR4-NOT complex","protein_coding"
"Seita.9G079800.1","No alias","Setaria italica ","SnRK2 SNF1-related protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.9G134600.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G193600.1","No alias","Setaria italica ","Kinesin-7-type motor protein","protein_coding"
"Seita.9G200800.1","No alias","Setaria italica ","component *(NDUFA2/B8) of NADH dehydrogenase alpha subcomplex","protein_coding"
"Seita.9G363600.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G370200.1","No alias","Setaria italica ","3-beta hydroxysteroid dehydrogenase of phytosterol C4-demethylation complex & EC_1.1 oxidoreductase acting on CH-OH group of donor","protein_coding"
"Seita.9G379200.1","No alias","Setaria italica ","histone demethylase *(JMJD6)","protein_coding"
"Seita.9G474700.1","No alias","Setaria italica ","transcriptional co-regulator *(Oberon)","protein_coding"
"Seita.9G480300.1","No alias","Setaria italica ","RLCK-V receptor-like protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Seita.9G544900.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.J004400.1","No alias","Setaria italica ","potassium cation transporter *(HAK/KUP/KT)","protein_coding"
"Sobic.001G039800.1","No alias","Sorghum bicolor ","transcription factor *(CRF) & subgroup ERF-VI transcription factor","protein_coding"
"Sobic.001G066100.2","No alias","Sorghum bicolor ","TCP-type transcription factor","protein_coding"
"Sobic.001G071600.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G072500.2","No alias","Sorghum bicolor ","component *(THOC2/Tho2) of mRNP trafficking THO subcomplex","protein_coding"
"Sobic.001G153600.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G337600.1","No alias","Sorghum bicolor ","protein involved in cytochrome b6/f complex assembly *(HCF222)","protein_coding"
"Sobic.001G365600.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G447700.1","No alias","Sorghum bicolor ","regulatory protein *(SHW) involved in photoreceptor signalling","protein_coding"
"Sobic.001G479100.1","No alias","Sorghum bicolor ","component *(ORC2) of origin recognition complex","protein_coding"
"Sobic.001G494000.1","No alias","Sorghum bicolor ","BEL-type transcription factor","protein_coding"
"Sobic.001G498700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G513000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G537100.1","No alias","Sorghum bicolor ","phosphopantetheinyl transferase *(mtPPT))","protein_coding"
"Sobic.001G539400.1","No alias","Sorghum bicolor ","P3A-type proton-translocating ATPase *(AHA)","protein_coding"
"Sobic.002G056000.1","No alias","Sorghum bicolor ","DNA methyltransferase *(MET)","protein_coding"
"Sobic.002G114700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G164900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G226100.1","No alias","Sorghum bicolor ","thylakoid biogenesis chaperone *(SCO2/CYO1) & protein disulfide isomerase *(SCO2/CYO1)","protein_coding"
"Sobic.002G258100.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G281800.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G301400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G306400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G329300.2","No alias","Sorghum bicolor ","transcriptional regulator *(PRI1) of transient metal homeostasis & bHLH-type transcription factor","protein_coding"
"Sobic.002G354800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G370700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G384300.1","No alias","Sorghum bicolor ","MYB class-R2R3 transcription factor","protein_coding"
"Sobic.002G418600.1","No alias","Sorghum bicolor ","chromatin remodeling factor *(SHPRH)","protein_coding"
"Sobic.003G045000.1","No alias","Sorghum bicolor ","regulatory component B1 of PP2A phosphatase complexes","protein_coding"
"Sobic.003G048000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G110400.1","No alias","Sorghum bicolor ","component *(NSH2) of NSH1-NSH2 nucleoside hydrolase heterodimer","protein_coding"
"Sobic.003G126500.1","No alias","Sorghum bicolor ","hydroxymethylglutaryl-CoA lyase & EC_4.1 carbon-carbon lyase","protein_coding"
"Sobic.003G189600.1","No alias","Sorghum bicolor ","PQQL-like peptidase","protein_coding"
"Sobic.003G213000.1","No alias","Sorghum bicolor ","sugar efflux transporter *(SWEET)","protein_coding"
"Sobic.003G214700.1","No alias","Sorghum bicolor ","component *(LUG/LUH) of transcriptional co-repressor complex","protein_coding"
"Sobic.003G218300.1","No alias","Sorghum bicolor ","tRNA cytidine-methyltransferase *(DNMT)","protein_coding"
"Sobic.003G252100.1","No alias","Sorghum bicolor ","component *(RINGLET/RLT) of ISWI chromatin remodeling complex","protein_coding"
"Sobic.003G304800.1","No alias","Sorghum bicolor ","protease *(RBL)","protein_coding"
"Sobic.003G328700.1","No alias","Sorghum bicolor ","component *(NRPB5) of RNA polymerase II complex & component *(NRPC5) of RNA polymerase III complex & component *(NRPD5) of RNA polymerase IV complex & component *(NRPA5) of RNA polymerase I complex","protein_coding"
"Sobic.003G344600.1","No alias","Sorghum bicolor ","nucleotide exchange factor *(BAG)","protein_coding"
"Sobic.003G345300.1","No alias","Sorghum bicolor ","plastidial splicing factor *(PDM3)","protein_coding"
"Sobic.003G386200.1","No alias","Sorghum bicolor ","E3 ubiquitin ligase","protein_coding"
"Sobic.003G411400.2","No alias","Sorghum bicolor ","histone H3K9 methyltransferase *(KYP) & EC_2.1 transferase transferring one-carbon group","protein_coding"
"Sobic.004G005000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G054500.1","No alias","Sorghum bicolor ","porphobilinogen deaminase *(HEMC) & EC_2.5 transferase transferring alkyl or aryl group, other than methyl group","protein_coding"
"Sobic.004G067000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G191200.1","No alias","Sorghum bicolor ","component *(PnsL2/PQL1) of NDH lumen subcomplex L","protein_coding"
"Sobic.004G249600.1","No alias","Sorghum bicolor ","solute transporter *(MTCC)","protein_coding"
"Sobic.004G256200.1","No alias","Sorghum bicolor ","BBX class-II transcription factor","protein_coding"
"Sobic.005G025300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.005G152000.1","No alias","Sorghum bicolor ","tyrosine aminotransferase *(TAT) & EC_2.6 transferase transferring nitrogenous group","protein_coding"
"Sobic.006G060000.1","No alias","Sorghum bicolor ","phosphatidylinositol synthase *(PIS) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.006G085601.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G097800.2","No alias","Sorghum bicolor ","EC_2.4 glycosyltransferase","protein_coding"
"Sobic.006G128700.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G140000.1","No alias","Sorghum bicolor ","LRR-XI protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.006G271000.1","No alias","Sorghum bicolor ","component *(MIS12) of kinetochore MIS12 complex","protein_coding"
"Sobic.007G108500.1","No alias","Sorghum bicolor ","phosphatidate phosphatase *(LPP-alpha) & EC_3.1 hydrolase acting on ester bond","protein_coding"
"Sobic.007G132900.1","No alias","Sorghum bicolor ","chromatin architectural modulator *(HMGA)","protein_coding"
"Sobic.007G193700.1","No alias","Sorghum bicolor ","threonylcarbamoyl-AMP synthase","protein_coding"
"Sobic.007G219000.1","No alias","Sorghum bicolor ","substrate adaptor of CUL4-based E3 ubiquitin ligase complex","protein_coding"
"Sobic.008G097000.1","No alias","Sorghum bicolor ","L-galactose dehydrogenase *(GalDH)","protein_coding"
"Sobic.008G116600.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G027000.1","No alias","Sorghum bicolor ","EC_1.3 oxidoreductase acting on CH-CH group of donor","protein_coding"
"Sobic.009G052000.4","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G080600.1","No alias","Sorghum bicolor ","mannan O-acetyltransferase *(MOAT)","protein_coding"
"Sobic.009G151400.2","No alias","Sorghum bicolor ","protein S-acyltransferase *(PAT1-9)","protein_coding"
"Sobic.009G160100.3","No alias","Sorghum bicolor ","pyrroline-5-carboxylate synthetase & EC_1.2 oxidoreductase acting on aldehyde or oxo group of donor","protein_coding"
"Sobic.009G193700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G234200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.010G032900.1","No alias","Sorghum bicolor ","1-deoxy-D-xylulose 5-phosphate synthase *(DXS) & EC_2.2 transferase transferring aldehyde or ketonic group","protein_coding"
"Sobic.010G054900.1","No alias","Sorghum bicolor ","RLCK-VIIa receptor-like protein kinase & EC_2.7 transferase transferring phosphorus-containing group","protein_coding"
"Sobic.010G077600.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Solyc01g005840","No alias","Solanum lycopersicum","ubiquitin-conjugating enzyme E2 -like protein","protein_coding"
"Solyc01g006490","No alias","Solanum lycopersicum","uncharacterized protein","protein_coding"
"Solyc01g094080","No alias","Solanum lycopersicum","Cytochrome P450 family protein (AHRD V3.3 *** A0A061DTU0_THECC)","protein_coding"
"Solyc01g095120","No alias","Solanum lycopersicum","alpha/beta-hydrolases superfamily protein","protein_coding"
"Solyc01g099710","No alias","Solanum lycopersicum","Phospholipid/glycerol acyltransferase family protein (AHRD V3.3 *** B9N4I6_POPTR)","protein_coding"
"Solyc01g100270","No alias","Solanum lycopersicum","3'-5' exonuclease domain-containing family protein (AHRD V3.3 *** U5GFK4_POPTR)","protein_coding"
"Solyc01g103130","No alias","Solanum lycopersicum","Dynamin (AHRD V3.3 *** A0A103XDG1_CYNCS)","protein_coding"
"Solyc01g104040","No alias","Solanum lycopersicum","UDP-glucose glycoprotein glucosyltransferase (AHRD V3.3 *** A0A0G2RIE9_CAMSI)","protein_coding"
"Solyc01g108070","No alias","Solanum lycopersicum","Class I glutamine amidotransferase-like superfamily protein isoform 1 (AHRD V3.3 *** A0A061E0X3_THECC)","protein_coding"
"Solyc01g112250","No alias","Solanum lycopersicum","Calcium-dependent protein kinase family protein (AHRD V3.3 *** AT2G17290.2)","protein_coding"
"Solyc02g021240","No alias","Solanum lycopersicum","oligopeptide transporter 1","protein_coding"
"Solyc02g032420","No alias","Solanum lycopersicum","LOW QUALITY:purple acid phosphatase 14 (AHRD V3.3 --* AT2G46880.2)","protein_coding"
"Solyc02g062540","No alias","Solanum lycopersicum","Thioredoxin domain-containing protein, putative (AHRD V3.3 *** B9S6A8_RICCO)","protein_coding"
"Solyc02g064940","No alias","Solanum lycopersicum","Leucine-rich repeat receptor-like protein kinase family (AHRD V3.3 *** A0A0K9PL83_ZOSMR)","protein_coding"
"Solyc02g069390","No alias","Solanum lycopersicum","Transcription factor, putative (AHRD V3.3 *** B9RPY7_RICCO)","protein_coding"
"Solyc02g071280","No alias","Solanum lycopersicum","16S rRNA processing protein RimM family (AHRD V3.3 *** AT5G46420.1)","protein_coding"
"Solyc02g078180","No alias","Solanum lycopersicum","DUF616 family protein (AHRD V3.3 *** G7IPT3_MEDTR)","protein_coding"
"Solyc02g082030","No alias","Solanum lycopersicum","Protein TRIGALACTOSYLDIACYLGLYCEROL 2, chloroplastic (AHRD V3.3 *** TGD2_ARATH)","protein_coding"
"Solyc02g082430","No alias","Solanum lycopersicum","MLO-like protein (AHRD V3.3 *** K4BAB3_SOLLC)","protein_coding"
"Solyc02g093460","No alias","Solanum lycopersicum","tRNA-pseudouridine synthase, putative (AHRD V3.3 *** B9S669_RICCO)","protein_coding"
"Solyc02g093530","No alias","Solanum lycopersicum","Ras-related protein (AHRD V3.3 *** W9QSD6_9ROSA)","protein_coding"
"Solyc02g094220","No alias","Solanum lycopersicum","transmembrane protein, putative (DUF 3339) (AHRD V3.3 *** AT3G48660.1)","protein_coding"
"Solyc02g094510","No alias","Solanum lycopersicum","RING finger protein (AHRD V3.3 *** G7KX94_MEDTR)","protein_coding"
"Solyc03g096460","No alias","Solanum lycopersicum","wound/stress protein AY568721","protein_coding"
"Solyc03g112420","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A103XY30_CYNCS)","protein_coding"
"Solyc03g113780","No alias","Solanum lycopersicum","Pyridoxamine 5-phosphate oxidase, putative (AHRD V3.3 *** B9RJT5_RICCO)","protein_coding"
"Solyc03g114660","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A103XYK3_CYNCS)","protein_coding"
"Solyc03g114790","No alias","Solanum lycopersicum","Isoaspartyl peptidase/L-asparaginase (AHRD V3.3 *** ASPG_LUPLU)","protein_coding"
"Solyc03g117100","No alias","Solanum lycopersicum","PPPDE putative thiol peptidase family protein (AHRD V3.3 *** AT1G80690.1)","protein_coding"
"Solyc03g120510","No alias","Solanum lycopersicum","LOW QUALITY:Pentatricopeptide repeat-containing protein family (AHRD V3.3 *** A0A151SH53_CAJCA)","protein_coding"
"Solyc03g122070","No alias","Solanum lycopersicum","ABC transporter B family-like protein (AHRD V3.3 *** G7L8C5_MEDTR)","protein_coding"
"Solyc03g122090","No alias","Solanum lycopersicum","25. vesicle transport protein (AHRD V3.3 *** A0A1D1XNZ8_9ARAE)","protein_coding"
"Solyc03g123760","No alias","Solanum lycopersicum","phytoene desaturase","protein_coding"
"Solyc04g009530","No alias","Solanum lycopersicum","Glutathione S-transferase (AHRD V3.3 *** A0A0N9HM59_HELAN)","protein_coding"
"Solyc04g014670","No alias","Solanum lycopersicum","NAD(P)-binding Rossmann-fold superfamily protein (AHRD V3.3 *** AT2G29150.1),Pfam:PF13561","protein_coding"
"Solyc04g015150","No alias","Solanum lycopersicum","Phosphoglycolate phosphatase (AHRD V3.3 *** M1BQX5_SOLTU)","protein_coding"
"Solyc04g015960","No alias","Solanum lycopersicum","NAC domain-containing protein, putative (AHRD V3.3 --* B9S9K8_RICCO)","protein_coding"
"Solyc04g049940","No alias","Solanum lycopersicum","LOW QUALITY:Auxin-responsive GH3 family protein (AHRD V3.3 --* AT4G37390.1)","protein_coding"
"Solyc04g063270","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing family protein (AHRD V3.3 *** B9IJY6_POPTR)","protein_coding"
"Solyc04g077620","No alias","Solanum lycopersicum","LOW QUALITY:Spc97 / Spc98 family of spindle pole body (SBP) component (AHRD V3.3 --* AT1G80260.3)","protein_coding"
"Solyc04g078090","No alias","Solanum lycopersicum","Acyl-CoA-binding domain protein (AHRD V3.3 *-* A0A072VPF6_MEDTR)","protein_coding"
"Solyc05g006040","No alias","Solanum lycopersicum","Serine/Threonine-kinase (AHRD V3.3 *-* AT1G10522.2)","protein_coding"
"Solyc05g006970","No alias","Solanum lycopersicum","small multi-drug export protein (AHRD V3.3 *** AT2G02590.1)","protein_coding"
"Solyc05g009290","No alias","Solanum lycopersicum","Protein FLX-like 3 (AHRD V3.3 *** A0A199UZ70_ANACO)","protein_coding"
"Solyc05g009760","No alias","Solanum lycopersicum","NBS-LRR resistance protein-like protein (AHRD V3.3 *** A1Y9Q8_SOLLC)","protein_coding"
"Solyc05g012120","No alias","Solanum lycopersicum","Ribosome maturation factor RimP (AHRD V3.3 *** A0A0B2RDN8_GLYSO)","protein_coding"
"Solyc05g014340","No alias","Solanum lycopersicum","Serine/threonine protein phosphatase 2A regulatory subunit B (AHRD V3.3 *** B9HTC9_POPTR)","protein_coding"
"Solyc05g018500","No alias","Solanum lycopersicum","Protein OBERON 3-like protein (AHRD V3.3 *** A0A0B0MD36_GOSAR)","protein_coding"
"Solyc05g046360","No alias","Solanum lycopersicum","Cell differentiation protein rcd1, putative (AHRD V3.3 *** B9STZ0_RICCO)","protein_coding"
"Solyc05g047610","No alias","Solanum lycopersicum","S-acyltransferase (AHRD V3.3 *-* M1B2H3_SOLTU)","protein_coding"
"Solyc06g006040","No alias","Solanum lycopersicum","Non-specific serine/threonine protein kinase (AHRD V3.3 *** M1ANR5_SOLTU)","protein_coding"
"Solyc06g008920","No alias","Solanum lycopersicum","AMP dependent ligase, putative (AHRD V3.3 *** B9R8M5_RICCO)","protein_coding"
"Solyc06g034230","No alias","Solanum lycopersicum","Ubiquitin carboxyl-terminal hydrolase family protein (AHRD V3.3 *-* AT1G71850.1)","protein_coding"
"Solyc06g036310","No alias","Solanum lycopersicum","Heavy metal transport/detoxification superfamily protein (AHRD V3.3 *** A0A072TW71_MEDTR)","protein_coding"
"Solyc06g036460","No alias","Solanum lycopersicum","Membrane-associated kinase regulator-like protein, putative (AHRD V3.3 *** A0A072U8P3_MEDTR)","protein_coding"
"Solyc06g051410","No alias","Solanum lycopersicum","Phosphoribosylanthranilate isomerase (AHRD V3.3 *** F1BPW4_SOLPN)","protein_coding"
"Solyc06g053560","No alias","Solanum lycopersicum","Casein kinase, putative (AHRD V3.3 *** B9SS69_RICCO)","protein_coding"
"Solyc06g069190","No alias","Solanum lycopersicum","Eukaryotic aspartyl protease family protein (AHRD V3.3 *** AT1G49050.1)","protein_coding"
"Solyc06g072380","No alias","Solanum lycopersicum","3,4-dihydroxy-2-butanone kinase","protein_coding"
"Solyc06g073280","No alias","Solanum lycopersicum","Aminotransferase (AHRD V3.3 *** C1FDC5_MICCC)","protein_coding"
"Solyc06g076350","No alias","Solanum lycopersicum","LePCL1","protein_coding"
"Solyc07g014590","No alias","Solanum lycopersicum","Isoamylase (AHRD V3.3 *** Q1AJM7_IPOBA)","protein_coding"
"Solyc07g052590","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing family protein (AHRD V3.3 *** B9IQB5_POPTR)","protein_coding"
"Solyc07g062540","No alias","Solanum lycopersicum","Mannosyltransferase (AHRD V3.3 *** K4CGT7_SOLLC)","protein_coding"
"Solyc07g066460","No alias","Solanum lycopersicum","Protein Iojap (AHRD V3.3 *** A0A151S2U3_CAJCA)","protein_coding"
"Solyc08g006780","No alias","Solanum lycopersicum","Nucleoid-associated protein (AHRD V3.3 *** A0A199V9B5_ANACO)","protein_coding"
"Solyc08g008180","No alias","Solanum lycopersicum","Loricrin-like (AHRD V3.3 *** A0A0K9PKU0_ZOSMR)","protein_coding"
"Solyc08g065640","No alias","Solanum lycopersicum","PITH domain-containing protein 1 (AHRD V3.3 *** A0A0B2SR38_GLYSO)","protein_coding"
"Solyc08g066450","No alias","Solanum lycopersicum","DUF1677 family protein (AHRD V3.3 *** G7LFY6_MEDTR)","protein_coding"
"Solyc08g066530","No alias","Solanum lycopersicum","Acid phosphatase 1 (AHRD V3.3 *** W9S6E0_9ROSA)","protein_coding"
"Solyc08g076840","No alias","Solanum lycopersicum","RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *** AT2G35410.1)","protein_coding"
"Solyc08g077500","No alias","Solanum lycopersicum","Pleckstrin (PH) domain-containing protein isoform 1 (AHRD V3.3 *** A0A061G2P4_THECC)","protein_coding"
"Solyc09g005360","No alias","Solanum lycopersicum","PHD finger alfin-like protein (AHRD V3.3 *** A0A072UGM4_MEDTR)","protein_coding"
"Solyc09g005640","No alias","Solanum lycopersicum","Protein SCO1, mitochondrial-like protein (AHRD V3.3 *** A0A0B0PAY7_GOSAR)","protein_coding"
"Solyc09g007640","No alias","Solanum lycopersicum","Carboxypeptidase (AHRD V3.3 *** K4CQF3_SOLLC)","protein_coding"
"Solyc09g009430","No alias","Solanum lycopersicum","Cell division protein ftsZ, putative (AHRD V3.3 *** B9SRX2_RICCO)","protein_coding"
"Solyc09g009910","No alias","Solanum lycopersicum","ABC transporter family protein (AHRD V3.3 *** A0A097P9R7_HEVBR)","protein_coding"
"Solyc09g009960","No alias","Solanum lycopersicum","4'-phosphopantetheinyl transferase (AHRD V3.3 *** A0A151RRT2_CAJCA)","protein_coding"
"Solyc09g011330","No alias","Solanum lycopersicum","Serine/threonine-protein kinase (AHRD V3.3 *** M1C8X1_SOLTU)","protein_coding"
"Solyc09g018220","No alias","Solanum lycopersicum","Tobacco mosaic virus resistance-2","protein_coding"
"Solyc09g064430","No alias","Solanum lycopersicum","Tyrosine decarboxylase family protein (AHRD V3.3 *** B9GRB9_POPTR)","protein_coding"
"Solyc09g065030","No alias","Solanum lycopersicum","TRICHOME BIREFRINGENCE-LIKE 11 (AHRD V3.3 *** AT5G19160.1)","protein_coding"
"Solyc09g082060","No alias","Solanum lycopersicum","Cysteine synthase (AHRD V3.3 *** CYSK_SOLTU)","protein_coding"
"Solyc09g082730","No alias","Solanum lycopersicum","Aldo_keto reductase family protein  IPR001395  Aldo_keto reductase","protein_coding"
"Solyc10g005540","No alias","Solanum lycopersicum","S-adenosylmethionine-dependent methyltransferase, putative (AHRD V3.3 *** B9RHZ5_RICCO)","protein_coding"
"Solyc10g050840","No alias","Solanum lycopersicum","Dipeptidyl peptidase family member 6 (AHRD V3.3 *** A0A151SBS0_CAJCA)","protein_coding"
"Solyc10g055390","No alias","Solanum lycopersicum","Nodulin-like / Major Facilitator Superfamily protein (AHRD V3.3 *** A0A0K9P7P6_ZOSMR)","protein_coding"
"Solyc10g055520","No alias","Solanum lycopersicum","No description available","protein_coding"
"Solyc10g074590","No alias","Solanum lycopersicum","pantothenate kinase (AHRD V3.3 *** AT4G35360.2)","protein_coding"
"Solyc10g078920","No alias","Solanum lycopersicum","Thioredoxin (AHRD V3.3 *** G7KVF9_MEDTR)","protein_coding"
"Solyc10g079250","No alias","Solanum lycopersicum","DNA repair protein recA (AHRD V3.3 *** A0A061GHC6_THECC)","protein_coding"
"Solyc10g083920","No alias","Solanum lycopersicum","Serine/threonine protein phosphatase 2A regulatory subunit B (AHRD V3.3 *** B9IFU5_POPTR)","protein_coding"
"Solyc11g006930","No alias","Solanum lycopersicum","4'-phosphopantetheinyl transferase family protein (AHRD V3.3 *** A0A072VJ15_MEDTR)","protein_coding"
"Solyc11g008970","No alias","Solanum lycopersicum","Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A103Y632_CYNCS)","protein_coding"
"Solyc11g045030","No alias","Solanum lycopersicum","cytoplasmic membrane protein","protein_coding"
"Solyc11g065080","No alias","Solanum lycopersicum","S2 self-incompatibility locus-linked pollen 3.2 protein (AHRD V3.3 *-* Q7XAE8_PETIN)","protein_coding"
"Solyc11g065250","No alias","Solanum lycopersicum","Pentatricopeptide repeat superfamily protein (AHRD V3.3 *** A0A061FB64_THECC)","protein_coding"
"Solyc11g065680","No alias","Solanum lycopersicum","transmembrane protein (AHRD V3.3 *** AT2G01870.1)","protein_coding"
"Solyc11g068540","No alias","Solanum lycopersicum","beta-alanine synthase","protein_coding"
"Solyc11g069690","No alias","Solanum lycopersicum","Protein disulfide-isomerase 5-1 (AHRD V3.3 *** PDI51_ARATH)","protein_coding"
"Solyc11g071960","No alias","Solanum lycopersicum","Sulfhydryl oxidase (AHRD V3.3 *** K4DAQ3_SOLLC)","protein_coding"
"Solyc11g072830","No alias","Solanum lycopersicum","Chitinase (AHRD V3.3 *** G7KL79_MEDTR)","protein_coding"
"Solyc12g009440","No alias","Solanum lycopersicum","Chaperone DnaJ (AHRD V3.3 *** A0A0B0P8V3_GOSAR)","protein_coding"
"Solyc12g013890","No alias","Solanum lycopersicum","embryo defective 2737 (AHRD V3.3 *** AT5G53860.2)","protein_coding"
"Solyc12g035250","No alias","Solanum lycopersicum","Zinc finger transcription factor 77","protein_coding"
"Solyc12g042200","No alias","Solanum lycopersicum","Transducin/WD40 repeat protein (AHRD V3.3 *** G7J399_MEDTR)","protein_coding"
"Solyc12g062250","No alias","Solanum lycopersicum","like SEX4 1 (AHRD V3.3 *** AT3G01510.1)","protein_coding"
"Solyc12g094430","No alias","Solanum lycopersicum","Glutathione S-transferase (AHRD V3.3 *** C7F8A3_ARAHY)","protein_coding"
"Solyc12g096660","No alias","Solanum lycopersicum","Type II inositol 5-phosphatase, putative (AHRD V3.3 *** B9RM01_RICCO)","protein_coding"
"Solyc12g096820","No alias","Solanum lycopersicum","Glycosyltransferase (AHRD V3.3 *** K4DHF5_SOLLC)","protein_coding"
"Solyc12g098370","No alias","Solanum lycopersicum","Myb family transcription factor APL (AHRD V3.3 *** A0A0B0NIP7_GOSAR)","protein_coding"
"Solyc12g098410","No alias","Solanum lycopersicum","Glucan endo-1,3-beta-glucosidase 1 (AHRD V3.3 *-* A0A151QZ89_CAJCA)","protein_coding"
"Solyc12g099160","No alias","Solanum lycopersicum","serine carboxypeptidase family protein","protein_coding"
"Sopen09g004710","No alias","Solanum pennellii","4'-phosphopantetheinyl transferase superfamily","protein_coding"
"Sopen11g002850","No alias","Solanum pennellii","4'-phosphopantetheinyl transferase superfamily","protein_coding"