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{"nodes": [{"data": {"id": "LOC_Os07g08030", "name": "LOC_Os07g08030", "species_id": 8, "species_name": "Oryza sativa", "gene_id": 223318, "gene_name": "LOC_Os07g08030", "network_method_id": 7, "node_type": "query", "gene_link": "/sequence/view/223318", "color": "#CCC", "shape": "ellipse", "description": "ribose-5-phosphate isomerase A, putative, expressed", "best_name": "LOC_Os07g08030", "tokens": null, "interpro": ["Ribose5P_isomerase_typA"], "family_name": "OG_42_0001663", "family_id": 961472, "family_url": "/family/view/961472", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#F83", "family_shape": "ellipse", "lc_label": "OG_42_0001663;Ribose5P_isomerase_typA", "lc_color": "#F83", "lc_shape": "octagon", "species_color": "#CD1B50", "tag": "always_show"}}, {"data": {"id": "evm.model.tig00000551.5", "name": "evm.model.tig00000551.5", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 137741, "gene_name": "evm.model.tig00000551.5", "network_method_id": 5, "node_type": "query", "gene_link": "/sequence/view/137741", "color": "#CCC", "shape": "ellipse", "description": "(at3g04790 : 272.0) Ribose 5-phosphate isomerase, type A protein; FUNCTIONS IN: ribose-5-phosphate isomerase activity; INVOLVED IN: defense response to bacterium, reductive pentose-phosphate cycle; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribose 5-phosphate isomerase, type A (InterPro:IPR004788); BEST Arabidopsis thaliana protein match is: ribose-5-phosphate isomerase 2 (TAIR:AT2G01290.1); Has 5044 Blast hits to 5043 proteins in 1956 species: Archae - 235; Bacteria - 3572; Metazoa - 110; Fungi - 145; Plants - 141; Viruses - 0; Other Eukaryotes - 841 (source: NCBI BLink). & (reliability: 544.0) & (original description: no original description)", "best_name": "evm.model.tig00000551.5", "tokens": null, "interpro": ["Ribose5P_isomerase_typA"], "family_name": "OG_42_0001663", "family_id": 961472, "family_url": "/family/view/961472", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#F83", "family_shape": "ellipse", "lc_label": "OG_42_0001663;Ribose5P_isomerase_typA", "lc_color": "#F83", "lc_shape": "octagon", "species_color": "#3E12CD", "tag": "always_show"}}, {"data": {"id": "LOC_Os03g56370", "name": "LOC_Os03g56370", "species_id": 8, "species_name": "Oryza sativa", "gene_id": 207380, "gene_name": "LOC_Os03g56370", "network_method_id": 7, "node_type": "target", "gene_link": "/sequence/view/207380", "color": "#CCC", "shape": "ellipse", "description": "methyltransferase, putative, expressed", "best_name": "LOC_Os03g56370", "tokens": null, "interpro": ["Ppm1/Ppm2/Tcmp"], "family_name": "OG_42_0005275", "family_id": 965084, "family_url": "/family/view/965084", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#148", "family_shape": "rhomboid", "lc_label": "OG_42_0005275;Ppm1/Ppm2/Tcmp", "lc_color": "#148", "lc_shape": "hexagon", "species_color": "#CD1B50", "tag": "hideable"}}, {"data": {"id": "LOC_Os01g11230", "name": "LOC_Os01g11230", "species_id": 8, "species_name": "Oryza sativa", "gene_id": 191720, "gene_name": "LOC_Os01g11230", "network_method_id": 7, "node_type": "target", "gene_link": "/sequence/view/191720", "color": "#CCC", "shape": "ellipse", "description": "SOUL heme-binding protein, putative, expressed", "best_name": "LOC_Os01g11230", "tokens": null, "interpro": ["SOUL_haem-bd"], "family_name": "OG_42_0001887", "family_id": 961696, "family_url": "/family/view/961696", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#513", "family_shape": "diamond", "lc_label": "SOUL_haem-bd;OG_42_0001887", "lc_color": "#A1C", "lc_shape": "rhomboid", "species_color": "#CD1B50", "tag": "hideable"}}, {"data": {"id": "LOC_Os03g21370", "name": "LOC_Os03g21370", "species_id": 8, "species_name": "Oryza sativa", "gene_id": 204481, "gene_name": "LOC_Os03g21370", "network_method_id": 7, "node_type": "target", "gene_link": "/sequence/view/204481", "color": "#CCC", "shape": "ellipse", "description": "expressed protein", "best_name": "LOC_Os03g21370", "tokens": null, "interpro": ["Uncharacterised_Ycf54"], "family_name": "OG_42_0006740", "family_id": 966549, "family_url": "/family/view/966549", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#D9E", "family_shape": "vee", "lc_label": "OG_42_0006740;Uncharacterised_Ycf54", "lc_color": "#D9E", "lc_shape": "vee", "species_color": "#CD1B50", "tag": "hideable"}}, {"data": {"id": "LOC_Os04g23890", "name": "LOC_Os04g23890", "species_id": 8, "species_name": "Oryza sativa", "gene_id": 210179, "gene_name": "LOC_Os04g23890", "network_method_id": 7, "node_type": "target", "gene_link": "/sequence/view/210179", "color": "#CCC", "shape": "ellipse", "description": "AGC_PVPK_like_kin82y.10 - ACG kinases include homologs to PKA, PKG and PKC, expressed", "best_name": "LOC_Os04g23890", "tokens": null, "interpro": ["PAS", "PAS", "Prot_kinase_dom"], "family_name": "OG_42_0002367", "family_id": 962176, "family_url": "/family/view/962176", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#707", "family_shape": "diamond", "lc_label": "OG_42_0002367;PAS;Prot_kinase_dom", "lc_color": "#707", "lc_shape": "diamond", "species_color": "#CD1B50", "tag": "hideable"}}, {"data": {"id": "LOC_Os12g01210", "name": "LOC_Os12g01210", "species_id": 8, "species_name": "Oryza sativa", "gene_id": 242328, "gene_name": "LOC_Os12g01210", "network_method_id": 7, "node_type": "target", "gene_link": "/sequence/view/242328", "color": "#CCC", "shape": "ellipse", "description": "HCF152, putative, expressed", "best_name": "LOC_Os12g01210", "tokens": null, "interpro": ["Pentatricopeptide_repeat", "Pentatricopeptide_repeat", "Pentatricopeptide_repeat", "Pentatricopeptide_repeat", "Pentatricopeptide_repeat"], "family_name": "OG_42_0004570", "family_id": 964379, "family_url": "/family/view/964379", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#2D1", "family_shape": "hexagon", "lc_label": "OG_42_0004570;OG_42_0014386;OG_42_0013401;Pentatricopeptide_repeat", "lc_color": "#2D1", "lc_shape": "octagon", "species_color": "#CD1B50", "tag": "always_show"}}, {"data": {"id": "LOC_Os07g48610", "name": "LOC_Os07g48610", "species_id": 8, "species_name": "Oryza sativa", "gene_id": 227003, "gene_name": "LOC_Os07g48610", "network_method_id": 7, "node_type": "target", "gene_link": "/sequence/view/227003", "color": "#CCC", "shape": "ellipse", "description": "hydrolase, alpha/beta fold family domain containing protein, expressed", "best_name": "LOC_Os07g48610", "tokens": null, "interpro": ["AB_hydrolase_1"], "family_name": "OG_42_0001858", "family_id": 961667, "family_url": "/family/view/961667", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#E7A", "family_shape": "triangle", "lc_label": "OG_42_0001858;AB_hydrolase_1", "lc_color": "#E7A", "lc_shape": "triangle", "species_color": "#CD1B50", "tag": "hideable"}}, {"data": {"id": "LOC_Os08g37600", "name": "LOC_Os08g37600", "species_id": 8, "species_name": "Oryza sativa", "gene_id": 230529, "gene_name": "LOC_Os08g37600", "network_method_id": 7, "node_type": "target", "gene_link": "/sequence/view/230529", "color": "#CCC", "shape": "ellipse", "description": "citrate transporter, putative, expressed", "best_name": "LOC_Os08g37600", "tokens": null, "interpro": ["SLC13A/DASS"], "family_name": "OG_42_0001496", "family_id": 961305, "family_url": "/family/view/961305", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#EA6", "family_shape": "rectangle", "lc_label": "SLC13A/DASS;OG_42_0001496", "lc_color": "#7D3", "lc_shape": "rectangle", "species_color": "#CD1B50", "tag": "hideable"}}, {"data": {"id": "LOC_Os04g45600", "name": "LOC_Os04g45600", "species_id": 8, "species_name": "Oryza sativa", "gene_id": 212099, "gene_name": "LOC_Os04g45600", "network_method_id": 7, "node_type": "target", "gene_link": "/sequence/view/212099", "color": "#CCC", "shape": "ellipse", "description": "NDH-M H PLASTOQUINONE DEHY, putative, expressed", "best_name": "LOC_Os04g45600", "tokens": null, "interpro": ["NdhM"], "family_name": "OG_42_0008741", "family_id": 968550, "family_url": "/family/view/968550", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#2A6", "family_shape": "ellipse", "lc_label": "OG_42_0008741;NdhM", "lc_color": "#2A6", "lc_shape": "roundrectangle", "species_color": "#CD1B50", "tag": "hideable"}}, {"data": {"id": "LOC_Os02g52260", "name": "LOC_Os02g52260", "species_id": 8, "species_name": "Oryza sativa", "gene_id": 201971, "gene_name": "LOC_Os02g52260", "network_method_id": 7, "node_type": "target", "gene_link": "/sequence/view/201971", "color": "#CCC", "shape": "ellipse", "description": "expressed protein", "best_name": "LOC_Os02g52260", "tokens": null, "interpro": ["CAAD_dom"], "family_name": "OG_42_0000658", "family_id": 960467, "family_url": "/family/view/960467", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#000", "family_shape": "triangle", "lc_label": "CAAD_dom;OG_42_0000658;Chloroa_b-bind", "lc_color": "#EEB", "lc_shape": "ellipse", "species_color": "#CD1B50", "tag": "always_show"}}, {"data": {"id": "LOC_Os10g20310", "name": "LOC_Os10g20310", "species_id": 8, "species_name": "Oryza sativa", "gene_id": 236174, "gene_name": "LOC_Os10g20310", "network_method_id": 7, "node_type": "target", "gene_link": "/sequence/view/236174", "color": "#CCC", "shape": "ellipse", "description": "thioredoxin fold, putative, expressed", "best_name": "LOC_Os10g20310", "tokens": null, "family_name": "OG_42_0000164", "family_id": 959973, "family_url": "/family/view/959973", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#508", "family_shape": "octagon", "lc_label": "OG_42_0000164", "lc_color": "#508", "lc_shape": "diamond", "species_color": "#CD1B50", "tag": "hideable"}}, {"data": {"id": "LOC_Os11g11210", "name": "LOC_Os11g11210", "species_id": 8, "species_name": "Oryza sativa", "gene_id": 239156, "gene_name": "LOC_Os11g11210", "network_method_id": 7, "node_type": "target", "gene_link": "/sequence/view/239156", "color": "#CCC", "shape": "ellipse", "description": "OsClp12 - Putative Clp protease homologue, expressed", "best_name": "LOC_Os11g11210", "tokens": null, "interpro": ["Lon_substr-bd"], "family_name": "OG_42_0008712", "family_id": 968521, "family_url": "/family/view/968521", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#242", "family_shape": "hexagon", "lc_label": "OG_42_0008712;Lon_substr-bd", "lc_color": "#242", "lc_shape": "ellipse", "species_color": "#CD1B50", "tag": "hideable"}}, {"data": {"id": "LOC_Os07g13969", "name": "LOC_Os07g13969", "species_id": 8, "species_name": "Oryza sativa", "gene_id": 223874, "gene_name": "LOC_Os07g13969", "network_method_id": 7, "node_type": "target", "gene_link": "/sequence/view/223874", "color": "#CCC", "shape": "ellipse", "description": "expressed protein", "best_name": "LOC_Os07g13969", "tokens": null, "interpro": ["TSP9"], "family_name": "OG_42_0006732", "family_id": 966541, "family_url": "/family/view/966541", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#F01", "family_shape": "rhomboid", "lc_label": "OG_42_0006732;TSP9", "lc_color": "#F01", "lc_shape": "triangle", "species_color": "#CD1B50", "tag": "hideable"}}, {"data": {"id": "LOC_Os06g45370", "name": "LOC_Os06g45370", "species_id": 8, "species_name": "Oryza sativa", "gene_id": 222054, "gene_name": "LOC_Os06g45370", "network_method_id": 7, "node_type": "target", "gene_link": "/sequence/view/222054", "color": "#CCC", "shape": "ellipse", "description": "fructose-1,6-bisphosphatase, putative, expressed", "best_name": "LOC_Os06g45370", "tokens": null, "interpro": ["FBPase_N"], "family_name": "OG_42_0008016", "family_id": 967825, "family_url": "/family/view/967825", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#4FE", "family_shape": "octagon", "lc_label": "OG_42_0004831;Pyrophosphatase;OG_42_0004134;OG_42_0008016;FBPase_N;OG_42_0021024;OG_42_0004759", "lc_color": "#7DA", "lc_shape": "ellipse", "species_color": "#CD1B50", "tag": "hideable"}}, {"data": {"id": "LOC_Os04g54640", "name": "LOC_Os04g54640", "species_id": 8, "species_name": "Oryza sativa", "gene_id": 212947, "gene_name": "LOC_Os04g54640", "network_method_id": 7, "node_type": "target", "gene_link": "/sequence/view/212947", "color": "#CCC", "shape": "ellipse", "description": "peptidase, cysteine peptidase active site, putative, expressed", "best_name": "LOC_Os04g54640", "tokens": null, "family_name": "OG_42_0006807", "family_id": 966616, "family_url": "/family/view/966616", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#92B", "family_shape": "octagon", "lc_label": "OG_42_0006807", "lc_color": "#92B", "lc_shape": "diamond", "species_color": "#CD1B50", "tag": "hideable"}}, {"data": {"id": "LOC_Os03g24020", "name": "LOC_Os03g24020", "species_id": 8, "species_name": "Oryza sativa", "gene_id": 204682, "gene_name": "LOC_Os03g24020", "network_method_id": 7, "node_type": "target", "gene_link": "/sequence/view/204682", "color": "#CCC", "shape": "ellipse", "description": "ribosomal protein L6, putative, expressed", "best_name": "LOC_Os03g24020", "tokens": null, "interpro": ["Ribosomal_L6_a/b-dom", "Ribosomal_L6_a/b-dom"], "family_name": "OG_42_0002024", "family_id": 961833, "family_url": "/family/view/961833", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#183", "family_shape": "roundrectangle", "lc_label": "OG_42_0002024;Ribosomal_L6_a/b-dom", "lc_color": "#183", "lc_shape": "hexagon", "species_color": "#CD1B50", "tag": "hideable"}}, {"data": {"id": "LOC_Os01g45914", "name": "LOC_Os01g45914", "species_id": 8, "species_name": "Oryza sativa", "gene_id": 194601, "gene_name": "LOC_Os01g45914", "network_method_id": 7, "node_type": "target", "gene_link": "/sequence/view/194601", "color": "#CCC", "shape": "ellipse", "description": "expressed protein", "best_name": "LOC_Os01g45914", "tokens": null, "family_name": "OG_42_0094064", "family_id": 1053873, "family_url": "/family/view/1053873", "family_clade": "Oryza", "family_clade_color": "#7FFFD4", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#EF9", "family_shape": "ellipse", "lc_label": "OG_42_0094064", "lc_color": "#EF9", "lc_shape": "octagon", "species_color": "#CD1B50", "tag": "hideable"}}, {"data": {"id": "LOC_Os03g39830", "name": "LOC_Os03g39830", "species_id": 8, "species_name": "Oryza sativa", "gene_id": 205946, "gene_name": "LOC_Os03g39830", "network_method_id": 7, "node_type": "target", "gene_link": "/sequence/view/205946", "color": "#CCC", "shape": "ellipse", "description": "expressed protein", "best_name": "LOC_Os03g39830", "tokens": null, "family_name": "OG_42_0008687", "family_id": 968496, "family_url": "/family/view/968496", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#D60", "family_shape": "vee", "lc_label": "OG_42_0008687", "lc_color": "#D60", "lc_shape": "vee", "species_color": "#CD1B50", "tag": "hideable"}}, {"data": {"id": "LOC_Os01g72370", "name": "LOC_Os01g72370", "species_id": 8, "species_name": "Oryza sativa", "gene_id": 197037, "gene_name": "LOC_Os01g72370", "network_method_id": 7, "node_type": "target", "gene_link": "/sequence/view/197037", "color": "#CCC", "shape": "ellipse", "description": "helix-loop-helix DNA-binding domain containing protein, expressed", "best_name": "LOC_Os01g72370", "tokens": null, "interpro": ["bHLH_dom"], "family_name": "OG_42_0001810", "family_id": 961619, "family_url": "/family/view/961619", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#F66", "family_shape": "octagon", "lc_label": "bHLH_dom;OG_42_0001810", "lc_color": "#993", "lc_shape": "hexagon", "species_color": "#CD1B50", "tag": "hideable"}}, {"data": {"id": "LOC_Os01g25600", "name": "LOC_Os01g25600", "species_id": 8, "species_name": "Oryza sativa", "gene_id": 192946, "gene_name": "LOC_Os01g25600", "network_method_id": 7, "node_type": "target", "gene_link": "/sequence/view/192946", "color": "#CCC", "shape": "ellipse", "description": "tetratricopeptide repeat domain containing protein, expressed", "best_name": "LOC_Os01g25600", "tokens": null, "interpro": ["TPR_1", "LPA1-like"], "family_name": "OG_42_0008441", "family_id": 968250, "family_url": "/family/view/968250", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#220", "family_shape": "ellipse", "lc_label": "TPR_1;LPA1-like;OG_42_0008441", "lc_color": "#F25", "lc_shape": "triangle", "species_color": "#CD1B50", "tag": "hideable"}}, {"data": {"id": "LOC_Os12g29570", "name": "LOC_Os12g29570", "species_id": 8, "species_name": "Oryza sativa", "gene_id": 244890, "gene_name": "LOC_Os12g29570", "network_method_id": 7, "node_type": "target", "gene_link": "/sequence/view/244890", "color": "#CCC", "shape": "ellipse", "description": "expressed protein", "best_name": "LOC_Os12g29570", "tokens": null, "family_name": "OG_42_0005725", "family_id": 965534, "family_url": "/family/view/965534", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#74F", "family_shape": "triangle", "lc_label": "OG_42_0005725", "lc_color": "#74F", "lc_shape": "diamond", "species_color": "#CD1B50", "tag": "hideable"}}, {"data": {"id": "LOC_Os03g12620", "name": "LOC_Os03g12620", "species_id": 8, "species_name": "Oryza sativa", "gene_id": 203657, "gene_name": "LOC_Os03g12620", "network_method_id": 7, "node_type": "target", "gene_link": "/sequence/view/203657", "color": "#CCC", "shape": "ellipse", "description": "glycosyl hydrolases family 17, putative, expressed", "best_name": "LOC_Os03g12620", "tokens": null, "interpro": ["Glyco_hydro_17"], "family_name": "OG_42_0000705", "family_id": 960514, "family_url": "/family/view/960514", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#403", "family_shape": "vee", "lc_label": "Glyco_hydro_17;OG_42_0000705", "lc_color": "#066", "lc_shape": "ellipse", "species_color": "#CD1B50", "tag": "hideable"}}, {"data": {"id": "LOC_Os01g12900", "name": "LOC_Os01g12900", "species_id": 8, "species_name": "Oryza sativa", "gene_id": 191874, "gene_name": "LOC_Os01g12900", "network_method_id": 7, "node_type": "target", "gene_link": "/sequence/view/191874", "color": "#CCC", "shape": "ellipse", "description": "ras-related protein, putative, expressed", 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"family_id": 959930, "family_url": "/family/view/959930", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#006", "family_shape": "vee", "lc_label": "Vta1/CALS_N;FKS1-like_dom1;OG_42_0000121;Glyco_trans_48", "lc_color": "#699", "lc_shape": "vee", "species_color": "#CD1B50", "tag": "hideable"}}, {"data": {"id": "LOC_Os03g18940", "name": "LOC_Os03g18940", "species_id": 8, "species_name": "Oryza sativa", "gene_id": 204251, "gene_name": "LOC_Os03g18940", "network_method_id": 7, "node_type": "target", "gene_link": "/sequence/view/204251", "color": "#CCC", "shape": "ellipse", "description": "exonuclease, putative, expressed", "best_name": "LOC_Os03g18940", "tokens": null, "interpro": ["Exonuclease_RNaseT/DNA_pol3"], "family_name": "OG_42_0006204", "family_id": 966013, "family_url": "/family/view/966013", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#FEE", "family_shape": "rhomboid", "lc_label": "OG_42_0006204;Exonuclease_RNaseT/DNA_pol3", "lc_color": "#FEE", "lc_shape": "rhomboid", "species_color": "#CD1B50", "tag": "hideable"}}, {"data": {"id": "LOC_Os11g18919", "name": "LOC_Os11g18919", "species_id": 8, "species_name": "Oryza sativa", "gene_id": 239774, "gene_name": "LOC_Os11g18919", "network_method_id": 7, "node_type": "target", "gene_link": "/sequence/view/239774", "color": "#CCC", "shape": "ellipse", "description": "expressed protein", "best_name": "LOC_Os11g18919", "tokens": null, "family_name": "OG_42_0111484", "family_id": 1071293, "family_url": "/family/view/1071293", "family_clade": "Oryza", "family_clade_color": "#7FFFD4", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#33A", "family_shape": "triangle", "lc_label": "OG_42_0111484", "lc_color": "#33A", "lc_shape": "diamond", "species_color": "#CD1B50", "tag": "hideable"}}, {"data": {"id": "LOC_Os01g11952", "name": "LOC_Os01g11952", "species_id": 8, "species_name": "Oryza sativa", "gene_id": 191782, "gene_name": "LOC_Os01g11952", "network_method_id": 7, "node_type": "target", "gene_link": "/sequence/view/191782", "color": "#CCC", "shape": "ellipse", "description": "histone-lysine N-methyltransferase ATX5, putative, expressed", "best_name": "LOC_Os01g11952", "tokens": null, "interpro": ["SET_dom", "PWWP_dom"], "family_name": "OG_42_0002244", "family_id": 962053, "family_url": "/family/view/962053", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#B5C", "family_shape": "ellipse", "lc_label": "SET_dom;OG_42_0006949;Rubisco_LSMT_subst-bd;PWWP_dom;OG_42_0002244", "lc_color": "#3F2", "lc_shape": "ellipse", "species_color": "#CD1B50", "tag": "hideable"}}, {"data": {"id": "LOC_Os03g38230", "name": "LOC_Os03g38230", "species_id": 8, "species_name": "Oryza sativa", "gene_id": 205803, "gene_name": "LOC_Os03g38230", "network_method_id": 7, "node_type": "target", "gene_link": "/sequence/view/205803", "color": "#CCC", "shape": "ellipse", "description": "peptidase M50 family protein, putative, expressed", "best_name": "LOC_Os03g38230", "tokens": null, "interpro": ["Peptidase_M50", "PDZ"], "family_name": "OG_42_0004142", "family_id": 963951, "family_url": "/family/view/963951", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#4BC", "family_shape": "ellipse", "lc_label": "OG_42_0004142;Peptidase_M50;PDZ", "lc_color": "#4BC", "lc_shape": "rectangle", "species_color": "#CD1B50", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00000237.46", "name": "evm.model.tig00000237.46", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 134319, "gene_name": "evm.model.tig00000237.46", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/134319", "color": "#CCC", "shape": "ellipse", "description": "(at1g09680 : 83.2) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G39710.1); Has 56278 Blast hits to 14858 proteins in 304 species: Archae - 3; Bacteria - 59; Metazoa - 821; Fungi - 925; Plants - 52616; Viruses - 0; Other Eukaryotes - 1854 (source: NCBI BLink). & (reliability: 166.4) & (original description: no original description)", "best_name": "evm.model.tig00000237.46", "tokens": null, "interpro": ["Pentatricopeptide_repeat", "Pentatricopeptide_repeat", "Pentatricopeptide_repeat", "Pentatricopeptide_repeat", "Pentatricopeptide_repeat", "Pentatricopeptide_repeat", "Pentatricopeptide_repeat"], "family_name": "OG_42_0004570", "family_id": 964379, "family_url": "/family/view/964379", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#2D1", "family_shape": "hexagon", "lc_label": "OG_42_0004570;OG_42_0014386;OG_42_0013401;Pentatricopeptide_repeat", "lc_color": "#2D1", "lc_shape": "octagon", "species_color": "#3E12CD", "tag": "always_show"}}, {"data": {"id": "evm.model.tig00000828.28", "name": "evm.model.tig00000828.28", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 139853, "gene_name": "evm.model.tig00000828.28", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/139853", "color": "#CCC", "shape": "ellipse", "description": "(at2g25840 : 298.0) ovule abortion 4 (OVA4); FUNCTIONS IN: aminoacyl-tRNA ligase activity, tryptophan-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, ovule development; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Tryptophanyl-tRNA synthetase, class Ib (InterPro:IPR002306), Aminoacyl-tRNA synthetase, class Ib (InterPro:IPR002305); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 596.0) & (original description: no original description)", "best_name": "evm.model.tig00000828.28", "tokens": null, "interpro": ["aa-tRNA-synth_Ic", "aa-tRNA-synth_Ic"], "family_name": "OG_42_0007906", "family_id": 967715, "family_url": "/family/view/967715", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#AC8", "family_shape": "hexagon", "lc_label": "OG_42_0007906;OG_42_0005753;aa-tRNA-synth_Ic", "lc_color": "#AC8", "lc_shape": "hexagon", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00022080.15", "name": "evm.model.tig00022080.15", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 155702, "gene_name": "evm.model.tig00022080.15", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/155702", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "evm.model.tig00022080.15", "tokens": null, "family_name": "OG_42_0065373", "family_id": 1025182, "family_url": "/family/view/1025182", "family_clade": "Cyanophora", "family_clade_color": "#FFFF00", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#521", "family_shape": "hexagon", "lc_label": "OG_42_0065373", "lc_color": "#521", "lc_shape": "triangle", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00000042.56", "name": "evm.model.tig00000042.56", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 131399, "gene_name": "evm.model.tig00000042.56", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/131399", "color": "#CCC", "shape": "ellipse", "description": "(at4g14680 : 418.0) ATP sulfurylase; APS3; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Pseudouridine synthase/archaeosine transglycosylase-like (InterPro:IPR015947), Sulphate adenylyltransferase (InterPro:IPR002650); BEST Arabidopsis thaliana protein match is: ATP sulfurylase 1 (TAIR:AT3G22890.1); Has 2059 Blast hits to 2056 proteins in 649 species: Archae - 98; Bacteria - 865; Metazoa - 242; Fungi - 201; Plants - 189; Viruses - 0; Other Eukaryotes - 464 (source: NCBI BLink). & (reliability: 836.0) & (original description: no original description)", "best_name": "evm.model.tig00000042.56", "tokens": null, "interpro": ["ATP-Sase_PUA-like_dom", "Sulfurylase_cat_dom"], "family_name": "OG_42_0001933", "family_id": 961742, "family_url": "/family/view/961742", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#48F", "family_shape": "octagon", "lc_label": "OG_42_0001933;Sulfurylase_cat_dom;ATP-Sase_PUA-like_dom", "lc_color": "#48F", "lc_shape": "diamond", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00001388.17", "name": "evm.model.tig00001388.17", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 143326, "gene_name": "evm.model.tig00001388.17", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/143326", "color": "#CCC", "shape": "ellipse", "description": "(at3g02660 : 268.0) EMBRYO DEFECTIVE 2768 (emb2768); FUNCTIONS IN: RNA binding, tyrosine-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial (InterPro:IPR002307), RNA-binding S4 (InterPro:IPR002942), Aminoacyl-tRNA synthetase, class Ib (InterPro:IPR002305); Has 9022 Blast hits to 9013 proteins in 2715 species: Archae - 16; Bacteria - 5542; Metazoa - 116; Fungi - 145; Plants - 38; Viruses - 0; Other Eukaryotes - 3165 (source: NCBI BLink). & (reliability: 536.0) & (original description: no original description)", "best_name": "evm.model.tig00001388.17", "tokens": null, "interpro": ["aa-tRNA-synth_Ic"], "family_name": "OG_42_0005753", "family_id": 965562, "family_url": "/family/view/965562", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#F55", "family_shape": "roundrectangle", "lc_label": "OG_42_0007906;OG_42_0005753;aa-tRNA-synth_Ic", "lc_color": "#AC8", "lc_shape": "hexagon", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00021319.56", "name": "evm.model.tig00021319.56", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 152902, "gene_name": "evm.model.tig00021319.56", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/152902", "color": "#CCC", "shape": "ellipse", "description": "(at4g29060 : 193.0) embryo defective 2726 (emb2726); FUNCTIONS IN: RNA binding, translation elongation factor activity; INVOLVED IN: translational elongation, response to cadmium ion, embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Translation elongation factor EFTs/EF1B (InterPro:IPR001816), Translation elongation factor EFTs/EF1B, dimerisation (InterPro:IPR014039), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Translation elongation factor Ts, conserved site (InterPro:IPR018101), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: translation elongation factor Ts (EF-Ts), putative (TAIR:AT4G11120.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 386.0) & (original description: no original description)", "best_name": "evm.model.tig00021319.56", "tokens": null, "interpro": ["Transl_elong_EFTs/EF1B_dimer", "Transl_elong_EFTs/EF1B_dimer"], "family_name": "OG_42_0004408", "family_id": 964217, "family_url": "/family/view/964217", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#F49", "family_shape": "triangle", "lc_label": "S1_domain;OG_42_0004408;Transl_elong_EFTs/EF1B_dimer", "lc_color": "#7D9", "lc_shape": "ellipse", "species_color": "#3E12CD", "tag": "always_show"}}, {"data": {"id": "evm.model.tig00000133.49", "name": "evm.model.tig00000133.49", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 132560, "gene_name": "evm.model.tig00000133.49", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/132560", "color": "#CCC", "shape": "ellipse", "description": "(p46267|f16p2_brana : 126.0) Fructose-1,6-bisphosphatase, cytosolic (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase) (FBPase) - Brassica napus (Rape) & (at3g54050 : 123.0) Encodes HCEF1 (High Cyclic Electron Flow 1). Mutant phenotype: constitutively elevated electron flow (CEFI).; high cyclic electron flow 1 (HCEF1); FUNCTIONS IN: fructose 1,6-bisphosphate 1-phosphatase activity, phosphoric ester hydrolase activity; INVOLVED IN: response to cold, photosynthetic electron transport in photosystem I, fructose metabolic process; LOCATED IN: stromule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fructose-1,6-bisphosphatase, active site (InterPro:IPR020548), Fructose-1,6-bisphosphatase (InterPro:IPR000146); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT1G43670.1). & (reliability: 246.0) & (original description: no original description)", "best_name": "evm.model.tig00000133.49", "tokens": null, "interpro": ["FBPase_N"], "family_name": "OG_42_0021024", "family_id": 980833, "family_url": "/family/view/980833", "family_clade": "Archaeplastida", "family_clade_color": "#ADFF2F", "family_clade_shape": "roundrectangle", "family_clade_count": 22, "family_color": "#D54", "family_shape": "triangle", "lc_label": "OG_42_0004831;Pyrophosphatase;OG_42_0004134;OG_42_0008016;FBPase_N;OG_42_0021024;OG_42_0004759", "lc_color": "#7DA", "lc_shape": "ellipse", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00000803.3", "name": "evm.model.tig00000803.3", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 139589, "gene_name": "evm.model.tig00000803.3", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/139589", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "evm.model.tig00000803.3", "tokens": null, "family_name": "OG_42_0055451", "family_id": 1015260, "family_url": "/family/view/1015260", "family_clade": "Cyanophora", "family_clade_color": "#FFFF00", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#A4F", "family_shape": "diamond", "lc_label": "OG_42_0055451", "lc_color": "#A4F", "lc_shape": "vee", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00020560.9", "name": "evm.model.tig00020560.9", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 145196, "gene_name": "evm.model.tig00020560.9", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/145196", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "evm.model.tig00020560.9", "tokens": null, "interpro": ["Znf-RING_LisH"], "family_name": "OG_42_0058585", "family_id": 1018394, "family_url": "/family/view/1018394", "family_clade": "Cyanophora", "family_clade_color": "#FFFF00", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#EC0", "family_shape": "rhomboid", "lc_label": "Znf-RING_LisH;OG_42_0058585", "lc_color": "#A41", "lc_shape": "triangle", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00021682.4", "name": "evm.model.tig00021682.4", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 155185, "gene_name": "evm.model.tig00021682.4", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/155185", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "evm.model.tig00021682.4", "tokens": null, "interpro": ["AGL_glucanoTrfase", "GDE_C", "GDE_C", "AGL_central", "AGL_central"], "family_name": "OG_42_0065011", "family_id": 1024820, "family_url": "/family/view/1024820", "family_clade": "Cyanophora", "family_clade_color": "#FFFF00", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#AB0", "family_shape": "hexagon", "lc_label": "AGL_glucanoTrfase;AGL_central;GDE_C;OG_42_0065011", "lc_color": "#D22", "lc_shape": "rectangle", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00020675.102", "name": "evm.model.tig00020675.102", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 146582, "gene_name": "evm.model.tig00020675.102", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/146582", "color": "#CCC", "shape": "ellipse", "description": "(at4g17300 : 511.0) Asparaginyl-tRNA synthetase protein involved in amino acid activation/protein synthesis.; NS1; FUNCTIONS IN: asparagine-tRNA ligase activity; INVOLVED IN: asparaginyl-tRNA aminoacylation, ovule development; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Asparaginyl-tRNA synthetase, class IIb (InterPro:IPR004522), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Aspartyl/Asparaginyl-tRNA synthetase, class IIb (InterPro:IPR002312), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Aminoacyl-tRNA synthetase, class II (D/K/N) (InterPro:IPR004364), Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150); BEST Arabidopsis thaliana protein match is: Class II aminoacyl-tRNA and biotin synthetases superfamily protein (TAIR:AT1G70980.1); Has 19374 Blast hits to 17086 proteins in 2835 species: Archae - 447; Bacteria - 14373; Metazoa - 505; Fungi - 670; Plants - 294; Viruses - 0; Other Eukaryotes - 3085 (source: NCBI BLink). & (reliability: 1022.0) & (original description: no original description)", "best_name": "evm.model.tig00020675.102", "tokens": null, "interpro": ["aa-tRNA-synt_II", "NA-bd_OB_tRNA"], "family_name": "OG_42_0001608", "family_id": 961417, "family_url": "/family/view/961417", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#E24", "family_shape": "diamond", "lc_label": "NA-bd_OB_tRNA;OG_42_0001608;aa-tRNA-synt_II", "lc_color": "#6E6", "lc_shape": "diamond", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00000237.3", "name": "evm.model.tig00000237.3", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 134301, "gene_name": "evm.model.tig00000237.3", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/134301", "color": "#CCC", "shape": "ellipse", "description": "(at4g33030 : 602.0) involved in sulfolipid biosynthesis; sulfoquinovosyldiacylglycerol 1 (SQD1); FUNCTIONS IN: UDPsulfoquinovose synthase activity, sulfotransferase activity, zinc ion binding; INVOLVED IN: cellular response to phosphate starvation, sulfolipid biosynthetic process, glycolipid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); Has 10748 Blast hits to 10748 proteins in 2398 species: Archae - 273; Bacteria - 7931; Metazoa - 289; Fungi - 89; Plants - 466; Viruses - 5; Other Eukaryotes - 1695 (source: NCBI BLink). & (q84ki6|sqd1_spiol : 579.0) UDP-sulfoquinovose synthase, chloroplast precursor (EC 3.13.1.1) (Sulfite:UDP-glucose sulfotransferase) (Sulfolipid biosynthesis protein) (SoSQD1) - Spinacia oleracea (Spinach) & (reliability: 1204.0) & (original description: no original description)", "best_name": "evm.model.tig00000237.3", "tokens": null, "interpro": ["Epimerase_deHydtase"], "family_name": "OG_42_0006322", "family_id": 966131, "family_url": "/family/view/966131", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#E31", "family_shape": "roundrectangle", "lc_label": "Epimerase_deHydtase;OG_42_0006322", "lc_color": "#F4F", "lc_shape": "hexagon", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00000704.29", "name": "evm.model.tig00000704.29", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 138795, "gene_name": "evm.model.tig00000704.29", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/138795", "color": "#CCC", "shape": "ellipse", "description": "(at3g55800 : 366.0) Encodes the chloroplast enzyme sedoheptulose-1,7-bisphosphatase (SBPase), involved in the carbon reduction of the Calvin cycle. Increase in SBPase activity in transgenic lines accumulate up to 50% more sucrose and starch than wild-type.; sedoheptulose-bisphosphatase (SBPASE); FUNCTIONS IN: sedoheptulose-bisphosphatase activity, phosphoric ester hydrolase activity; INVOLVED IN: in 6 processes; LOCATED IN: thylakoid, apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Fructose-1,6-bisphosphatase, active site (InterPro:IPR020548), Fructose-1,6-bisphosphatase (InterPro:IPR000146); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT1G43670.1); Has 3745 Blast hits to 3741 proteins in 1296 species: Archae - 47; Bacteria - 2318; Metazoa - 373; Fungi - 154; Plants - 424; Viruses - 0; Other Eukaryotes - 429 (source: NCBI BLink). & (o20252|s17p_spiol : 356.0) Sedoheptulose-1,7-bisphosphatase, chloroplast precursor (EC 3.1.3.37) (Sedoheptulose-bisphosphatase) (SBPase) (SED(1,7)P2ase) - Spinacia oleracea (Spinach) & (reliability: 732.0) & (original description: no original description)", "best_name": "evm.model.tig00000704.29", "tokens": null, "interpro": ["FBPase_N"], "family_name": "OG_42_0004759", "family_id": 964568, "family_url": "/family/view/964568", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#A4D", "family_shape": "diamond", "lc_label": "OG_42_0004831;Pyrophosphatase;OG_42_0004134;OG_42_0008016;FBPase_N;OG_42_0021024;OG_42_0004759", "lc_color": "#7DA", "lc_shape": "ellipse", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00021070.120", "name": "evm.model.tig00021070.120", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 150932, "gene_name": "evm.model.tig00021070.120", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/150932", "color": "#CCC", "shape": "ellipse", "description": "(p46226|tpis_secce : 157.0) Triosephosphate isomerase, cytosolic (EC 5.3.1.1) (TIM) (Triose-phosphate isomerase) - Secale cereale (Rye) & (at2g21170 : 137.0) Encodes a plastidic triose phosphate isomerase. Mutants with reduced pdTPI levels have difficulty transitioning from heterotrophic to autotrophic growth. The related phenotypes, such as chlorosis in light-grown seedlings may result from an accumulation of dihydroxyacetone phosphate (DHAP) and methylglyoxal (MG) in these mutants. Both splice variants appear to be expressed, but the At2g21170.2 variant appears to have a much narrower expression range limited to roots.; triosephosphate isomerase (TIM); FUNCTIONS IN: triose-phosphate isomerase activity; INVOLVED IN: in 7 processes; LOCATED IN: thylakoid, mitochondrion, apoplast, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Triosephosphate isomerase, active site (InterPro:IPR020861), Aldolase-type TIM barrel (InterPro:IPR013785), Triosephosphate isomerase (InterPro:IPR000652); BEST Arabidopsis thaliana protein match is: triosephosphate isomerase (TAIR:AT3G55440.1); Has 11527 Blast hits to 11525 proteins in 3623 species: Archae - 144; Bacteria - 6185; Metazoa - 1204; Fungi - 240; Plants - 472; Viruses - 0; Other Eukaryotes - 3282 (source: NCBI BLink). & (reliability: 274.0) & (original description: no original description)", "best_name": "evm.model.tig00021070.120", "tokens": null, "interpro": ["Triosephosphate_isomerase"], "family_name": "OG_42_0001246", "family_id": 961055, "family_url": "/family/view/961055", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#A22", "family_shape": "octagon", "lc_label": "Triosephosphate_isomerase;OG_42_0001246", "lc_color": "#83C", "lc_shape": "hexagon", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00000342.50", "name": "evm.model.tig00000342.50", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 135322, "gene_name": "evm.model.tig00000342.50", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/135322", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "evm.model.tig00000342.50", "tokens": null, "interpro": ["Glyco_trans_1", "Starch_synth_cat_dom"], "family_name": "OG_42_0052831", "family_id": 1012640, "family_url": "/family/view/1012640", "family_clade": "Cyanophora", "family_clade_color": "#FFFF00", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#9DA", "family_shape": "rectangle", "lc_label": "Glyco_trans_1;OG_42_0052831;Starch_synth_cat_dom", "lc_color": "#51D", "lc_shape": "rectangle", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00020904.22", "name": "evm.model.tig00020904.22", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 148775, "gene_name": "evm.model.tig00020904.22", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/148775", "color": "#CCC", "shape": "ellipse", "description": "(p26302|kppr_wheat : 497.0) Phosphoribulokinase, chloroplast precursor (EC 2.7.1.19) (Phosphopentokinase) (PRKase) (PRK) - Triticum aestivum (Wheat) & (at1g32060 : 477.0) phosphoribulokinase (PRK); FUNCTIONS IN: protein binding, phosphoribulokinase activity, ATP binding; INVOLVED IN: response to cold, defense response to bacterium, biosynthetic process, peptidyl-cysteine S-nitrosylation; LOCATED IN: in 8 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Phosphoribulokinase (InterPro:IPR006082); BEST Arabidopsis thaliana protein match is: uridine kinase-like 5 (TAIR:AT3G27440.1); Has 6197 Blast hits to 6197 proteins in 2200 species: Archae - 37; Bacteria - 4118; Metazoa - 341; Fungi - 129; Plants - 1120; Viruses - 2; Other Eukaryotes - 450 (source: NCBI BLink). & (reliability: 954.0) & (original description: no original description)", "best_name": "evm.model.tig00020904.22", "tokens": null, "interpro": ["PRK/URK"], "family_name": "OG_42_0004030", "family_id": 963839, "family_url": "/family/view/963839", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#498", "family_shape": "roundrectangle", "lc_label": "PRK/URK;OG_42_0004030", "lc_color": "#188", "lc_shape": "ellipse", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00022075.33", "name": "evm.model.tig00022075.33", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 155623, "gene_name": "evm.model.tig00022075.33", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/155623", "color": "#CCC", "shape": "ellipse", "description": "(q6zix2|smt1_orysa : 340.0) Cycloartenol-C-24-methyltransferase 1 (EC 2.1.1.41) (24-sterol C-methyltransferase 1) (Sterol C-methyltransferase 1) - Oryza sativa (Rice) & (at5g13710 : 334.0) SMT1 controls the level of cholesterol in plants; sterol methyltransferase 1 (SMT1); CONTAINS InterPro DOMAIN/s: Sterol methyltransferase C-terminal (InterPro:IPR013705), Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: sterol methyltransferase 3 (TAIR:AT1G76090.1); Has 12253 Blast hits to 12250 proteins in 2286 species: Archae - 352; Bacteria - 8578; Metazoa - 91; Fungi - 457; Plants - 727; Viruses - 0; Other Eukaryotes - 2048 (source: NCBI BLink). & (reliability: 668.0) & (original description: no original description)", "best_name": "evm.model.tig00022075.33", "tokens": null, "interpro": ["Methyltransf_11", "Sterol_MeTrfase_C"], "family_name": "OG_42_0003116", "family_id": 962925, "family_url": "/family/view/962925", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#342", "family_shape": "hexagon", "lc_label": "OG_42_0003116;Sterol_MeTrfase_C;Methyltransf_11", "lc_color": "#342", "lc_shape": "octagon", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00000655.22", "name": "evm.model.tig00000655.22", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 138361, "gene_name": "evm.model.tig00000655.22", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/138361", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "evm.model.tig00000655.22", "tokens": null, "interpro": ["dUTPase-like"], "family_name": "OG_42_0054785", "family_id": 1014594, "family_url": "/family/view/1014594", "family_clade": "Cyanophora", "family_clade_color": "#FFFF00", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#8E3", "family_shape": "octagon", "lc_label": "OG_42_0054785;dUTPase-like", "lc_color": "#8E3", "lc_shape": "triangle", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00001466.1", "name": "evm.model.tig00001466.1", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 143474, "gene_name": "evm.model.tig00001466.1", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/143474", "color": "#CCC", "shape": "ellipse", "description": "(at3g48110 : 337.0) glycine-tRNA ligase; EMBRYO-DEFECTIVE-DEVELOPMENT 1 (EDD1); FUNCTIONS IN: glycine-tRNA ligase activity; INVOLVED IN: regulation of embryonic development, glycyl-tRNA aminoacylation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycyl-tRNA synthetase, class IIc, beta subunit, N-terminal (InterPro:IPR002311), Glycyl-tRNA synthetase, class II, heterodimeric (InterPro:IPR006194), Glycyl-tRNA synthetase, class IIc, beta subunit (InterPro:IPR015944), Glycyl-tRNA synthetase, class IIc, alpha subunit (InterPro:IPR002310); Has 11308 Blast hits to 11293 proteins in 1754 species: Archae - 4; Bacteria - 6864; Metazoa - 4; Fungi - 1; Plants - 40; Viruses - 0; Other Eukaryotes - 4395 (source: NCBI BLink). & (reliability: 674.0) & (original description: no original description)", "best_name": "evm.model.tig00001466.1", "tokens": null, "interpro": ["Gly-tRNA_ligase_asu", "Gly-tRNA_ligase_asu", "Gly-tRNA-synth_bsu", "Gly-tRNA-synth_bsu", "Gly-tRNA-synth_bsu"], "family_name": "OG_42_0008683", "family_id": 968492, "family_url": "/family/view/968492", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#E9A", "family_shape": "ellipse", "lc_label": "OG_42_0008683;Gly-tRNA_ligase_asu;Gly-tRNA-synth_bsu", "lc_color": "#E9A", "lc_shape": "roundrectangle", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00000842.33", "name": "evm.model.tig00000842.33", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 139990, "gene_name": "evm.model.tig00000842.33", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/139990", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "evm.model.tig00000842.33", "tokens": null, "interpro": ["Ataxin-10_domain"], "family_name": "OG_42_0005935", "family_id": 965744, "family_url": "/family/view/965744", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#430", "family_shape": "roundrectangle", "lc_label": "OG_42_0005935;Ataxin-10_domain", "lc_color": "#430", "lc_shape": "rectangle", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00000863.15", "name": "evm.model.tig00000863.15", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 140219, "gene_name": "evm.model.tig00000863.15", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/140219", "color": "#CCC", "shape": "ellipse", "description": "(at5g14040 : 309.0) phosphate transporter 3;1 (PHT3;1); FUNCTIONS IN: binding; INVOLVED IN: transport, transmembrane transport; LOCATED IN: in 6 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: phosphate transporter 3;2 (TAIR:AT3G48850.1); Has 17134 Blast hits to 11746 proteins in 429 species: Archae - 0; Bacteria - 0; Metazoa - 7375; Fungi - 4841; Plants - 3332; Viruses - 3; Other Eukaryotes - 1583 (source: NCBI BLink). & (reliability: 618.0) & (original description: no original description)", "best_name": "evm.model.tig00000863.15", "tokens": null, "interpro": ["Mitochondrial_sb/sol_carrier", "Mitochondrial_sb/sol_carrier", "Mitochondrial_sb/sol_carrier"], "family_name": "OG_42_0001234", "family_id": 961043, "family_url": "/family/view/961043", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#986", "family_shape": "ellipse", "lc_label": "OG_42_0000637;Mitochondrial_sb/sol_carrier;OG_42_0001234", "lc_color": "#179", "lc_shape": "hexagon", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00000944.28", "name": "evm.model.tig00000944.28", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 140800, "gene_name": "evm.model.tig00000944.28", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/140800", "color": "#CCC", "shape": "ellipse", "description": "(p46267|f16p2_brana : 166.0) Fructose-1,6-bisphosphatase, cytosolic (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase) (FBPase) - Brassica napus (Rape) & (at1g43670 : 163.0) Inositol monophosphatase family protein; FUNCTIONS IN: fructose 1,6-bisphosphate 1-phosphatase activity, phosphoric ester hydrolase activity; INVOLVED IN: carbohydrate metabolic process, fructose metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Fructose-1,6-bisphosphatase, active site (InterPro:IPR020548), Fructose-1,6-bisphosphatase (InterPro:IPR000146); BEST Arabidopsis thaliana protein match is: high cyclic electron flow 1 (TAIR:AT3G54050.2); Has 3746 Blast hits to 3738 proteins in 1274 species: Archae - 47; Bacteria - 2330; Metazoa - 401; Fungi - 156; Plants - 330; Viruses - 0; Other Eukaryotes - 482 (source: NCBI BLink). & (reliability: 326.0) & (original description: no original description)", "best_name": "evm.model.tig00000944.28", "tokens": null, "interpro": ["Pyrophosphatase", "FBPase_N"], "family_name": "OG_42_0004134", "family_id": 963943, "family_url": "/family/view/963943", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#A5F", "family_shape": "vee", "lc_label": "OG_42_0004831;Pyrophosphatase;OG_42_0004134;OG_42_0008016;FBPase_N;OG_42_0021024;OG_42_0004759", "lc_color": "#7DA", "lc_shape": "ellipse", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00021319.48", "name": "evm.model.tig00021319.48", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 152893, "gene_name": "evm.model.tig00021319.48", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/152893", "color": "#CCC", "shape": "ellipse", "description": "(q42967|dcup_tobac : 414.0) Uroporphyrinogen decarboxylase, chloroplast precursor (EC 4.1.1.37) (URO-D) (UPD) - Nicotiana tabacum (Common tobacco) & (at2g40490 : 407.0) HEME2; FUNCTIONS IN: uroporphyrinogen decarboxylase activity; INVOLVED IN: porphyrin biosynthetic process; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Uroporphyrinogen decarboxylase HemE (InterPro:IPR006361), Uroporphyrinogen decarboxylase (URO-D) (InterPro:IPR000257); BEST Arabidopsis thaliana protein match is: Uroporphyrinogen decarboxylase (TAIR:AT3G14930.2); Has 7458 Blast hits to 7455 proteins in 2032 species: Archae - 137; Bacteria - 4041; Metazoa - 236; Fungi - 136; Plants - 121; Viruses - 0; Other Eukaryotes - 2787 (source: NCBI BLink). & (reliability: 814.0) & (original description: no original description)", "best_name": "evm.model.tig00021319.48", "tokens": null, "interpro": ["Uroporphyrinogen_deCOase"], "family_name": "OG_42_0002394", "family_id": 962203, "family_url": "/family/view/962203", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#222", "family_shape": "triangle", "lc_label": "OG_42_0057451;Uroporphyrinogen_deCOase;OG_42_0002394", "lc_color": "#3BD", "lc_shape": "rectangle", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00001525.6", "name": "evm.model.tig00001525.6", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 143665, "gene_name": "evm.model.tig00001525.6", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/143665", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "evm.model.tig00001525.6", "tokens": null, "interpro": ["Methyltranfer_dom"], "family_name": "OG_42_0016107", "family_id": 975916, "family_url": "/family/view/975916", "family_clade": "Archaeplastida", "family_clade_color": "#ADFF2F", "family_clade_shape": "roundrectangle", "family_clade_count": 22, "family_color": "#8FC", "family_shape": "vee", "lc_label": "Methyltranfer_dom;OG_42_0016107", "lc_color": "#61A", "lc_shape": "vee", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00021293.15", "name": "evm.model.tig00021293.15", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 152648, "gene_name": "evm.model.tig00021293.15", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/152648", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "evm.model.tig00021293.15", "tokens": null, "interpro": ["Aminotrans_IV"], "family_name": "OG_42_0005042", "family_id": 964851, "family_url": "/family/view/964851", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#454", "family_shape": "ellipse", "lc_label": "Aminotrans_IV;OG_42_0005042", "lc_color": "#CE4", "lc_shape": "roundrectangle", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00000823.28", "name": "evm.model.tig00000823.28", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 139785, "gene_name": "evm.model.tig00000823.28", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/139785", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "evm.model.tig00000823.28", "tokens": null, "family_name": "OG_42_0055570", "family_id": 1015379, "family_url": "/family/view/1015379", "family_clade": "Cyanophora", "family_clade_color": "#FFFF00", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#FC9", "family_shape": "rectangle", "lc_label": "OG_42_0055570", "lc_color": "#FC9", "lc_shape": "rectangle", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00021759.13", "name": "evm.model.tig00021759.13", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 155491, "gene_name": "evm.model.tig00021759.13", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/155491", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "evm.model.tig00021759.13", "tokens": null, "interpro": ["PAM68-like"], "family_name": "OG_42_0003631", "family_id": 963440, "family_url": "/family/view/963440", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#049", "family_shape": "octagon", "lc_label": "PAM68-like;OG_42_0003631", "lc_color": "#39C", "lc_shape": "hexagon", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00000157.101", "name": "evm.model.tig00000157.101", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 133041, "gene_name": "evm.model.tig00000157.101", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/133041", "color": "#CCC", "shape": "ellipse", "description": " no hits & (original description: no original description)", "best_name": "evm.model.tig00000157.101", "tokens": null, "family_name": "OG_42_0051407", "family_id": 1011216, "family_url": "/family/view/1011216", "family_clade": "Cyanophora", "family_clade_color": "#FFFF00", "family_clade_shape": "rectangle", "family_clade_count": 1, "family_color": "#F5B", "family_shape": "octagon", "lc_label": "OG_42_0051407", "lc_color": "#F5B", "lc_shape": "hexagon", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00001234.16", "name": "evm.model.tig00001234.16", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 142643, "gene_name": "evm.model.tig00001234.16", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/142643", "color": "#CCC", "shape": "ellipse", "description": "\"(q39566|gsa_chlre : 539.0) Glutamate-1-semialdehyde 2,1-aminomutase, chloroplast precursor (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) - Chlamydomonas reinhardtii & (at5g63570 : 492.0) Encodes a protein with homology to glutamate-1-semialdehyde 2,1-aminomutase catalyzing the conversion of glutamate-1-semialdehyde (GSA) into 5-amino levulinate. The expression of this gene was demonstrated to be light-induced.; \"\"glutamate-1-semialdehyde-2,1-aminomutase\"\" (GSA1); FUNCTIONS IN: glutamate-1-semialdehyde 2,1-aminomutase activity; INVOLVED IN: response to light stimulus, porphyrin biosynthetic process; LOCATED IN: apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase (InterPro:IPR004639), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate-1-semialdehyde 2,1-aminomutase 2 (TAIR:AT3G48730.1); Has 34880 Blast hits to 34874 proteins in 2819 species: Archae - 734; Bacteria - 23560; Metazoa - 547; Fungi - 812; Plants - 385; Viruses - 2; Other Eukaryotes - 8840 (source: NCBI BLink). & (reliability: 984.0) & (original description: no original description)\"", "best_name": "evm.model.tig00001234.16", "tokens": null, "interpro": ["Aminotrans_3"], "family_name": "OG_42_0006197", "family_id": 966006, "family_url": "/family/view/966006", "family_clade": "None", "family_clade_color": "#CCC", "family_clade_shape": "rectangle", "family_clade_count": 0, "family_color": "#6BF", "family_shape": "triangle", "lc_label": "Aminotrans_3;OG_42_0006197", "lc_color": "#E46", "lc_shape": "octagon", "species_color": "#3E12CD", "tag": "hideable"}}, {"data": {"id": "evm.model.tig00000215.116", "name": "evm.model.tig00000215.116", "species_id": 5, "species_name": "Cyanophora paradoxa", "gene_id": 133932, "gene_name": "evm.model.tig00000215.116", "network_method_id": 5, "node_type": "target", "gene_link": "/sequence/view/133932", "color": "#CCC", "shape": "ellipse", "description": "(at1g47290 : 240.0) Encodes an enzyme with 3β-hydroxysteroid dehydrogenase/C4-decarboxylase activity
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