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Heatmap: Cluster_3 (HCCA clusters)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
4 h after light
8 h after light
12 h after light
4 h after dark
8 h after dark
12 h after dark
1.69 - - - - 1.47
2.06 - - - 0.87 -
0.45 -0.89 -0.9 0.39 0.37 -0.08
0.45 -0.89 -0.9 0.39 0.37 -0.08
1.08 -2.54 -0.52 -1.42 0.55 0.24
0.38 -0.5 -1.0 -0.22 0.29 0.5
1.69 - - - - 1.47
0.31 -1.73 -1.21 -0.04 0.74 0.47
-0.04 - - -0.07 1.42 0.48
0.36 -0.35 - 0.5 0.33 0.32
1.69 - - - - 1.47
0.6 - - -0.58 0.98 0.88
-0.67 - - - 1.46 1.39
0.46 -3.3 -1.42 -0.39 0.97 0.52
0.23 0.23 -1.14 -0.54 0.35 0.31
0.62 -1.84 -0.19 -0.78 0.55 0.33
0.86 0.57 - - 0.19 0.64
2.06 - - - 0.87 -
1.13 - - - 0.94 0.92
0.45 -0.21 -0.87 -0.1 0.18 0.22
2.06 - - - 0.87 -
-0.98 -0.39 -0.77 -0.17 0.99 0.35
-0.07 -0.76 -0.56 -0.09 0.42 0.58
1.15 - - -1.03 0.54 0.88
-0.02 -0.06 -0.38 0.0 0.13 0.25
0.74 - - -0.46 1.12 0.52
0.58 0.29 - 0.4 0.97 -
1.69 - - - - 1.47
0.23 -1.06 -0.49 0.16 0.31 0.36
0.54 0.25 - - 0.66 0.83
1.8 - - - 0.6 -0.0
-0.3 -0.16 -0.55 0.05 0.56 0.14
2.06 - - - 0.87 -
0.43 -0.68 -0.4 -0.49 0.55 0.14
0.05 -0.27 -1.04 -0.07 0.3 0.56
2.06 - - - 0.87 -
2.06 - - - 0.87 -
1.69 - - - - 1.47
0.11 0.14 -0.47 -0.04 0.11 0.06
0.57 - - 0.39 0.96 0.35
0.62 -1.84 -0.19 -0.78 0.55 0.33
0.54 -0.44 -1.64 -0.59 0.48 0.51
0.86 -0.43 - 0.67 0.25 -0.6
1.62 - - - - 1.55
2.06 - - - 0.87 -
1.13 - - - 0.94 0.92
1.2 -8.26 - - 0.96 0.81
0.44 0.15 - - 0.25 1.23
0.51 -1.23 - -0.2 0.69 0.74
0.17 -0.39 -0.49 -0.16 0.54 0.06
0.91 - - 0.73 1.3 -
0.67 0.38 - -0.51 0.79 -0.55
1.39 - - - 0.19 1.17
1.39 - - - 0.19 1.17
1.69 - - - - 1.47
0.33 -0.11 -0.31 -0.21 0.07 0.14

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.