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Heatmap: Cluster_8 (HCCA clusters)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
4 h after light
8 h after light
12 h after light
4 h after dark
8 h after dark
12 h after dark
-0.43 0.55 0.44 -0.37 -0.37 -0.17
-1.0 0.29 0.06 0.23 -0.02 0.11
-1.71 0.11 1.01 -0.91 0.89 -2.18
- - 1.68 - 0.08 0.81
- - 1.13 - 0.51 1.26
- 0.81 0.51 1.5 - -
- - 1.24 - 1.22 0.38
- 1.67 - - - 1.5
- 0.04 1.73 0.13 -0.86 -
0.28 0.53 -0.06 -0.5 -0.54 -0.02
- 1.11 - - - 1.94
1.37 - 1.77 - - -
-0.67 0.85 0.53 -0.34 -0.92 -0.32
- 1.98 1.04 - - -
- - 1.01 0.43 1.4 -
-1.4 0.65 0.68 0.14 -0.78 -0.37
1.85 - 1.26 - - -
-0.46 0.59 0.52 -1.24 0.2 -0.39
-1.26 0.29 0.46 0.63 -0.06 -1.08
-2.81 0.35 0.54 0.8 -0.44 -0.62
- 1.67 - - - 1.5
- - 1.96 - - 1.09
0.14 0.03 0.36 -0.41 -0.27 0.03
- 1.27 0.85 0.27 -0.76 -
- 0.86 - - -0.04 1.69
-0.34 0.31 0.41 0.25 -0.47 -0.44
-1.5 0.62 0.48 -0.1 -0.71 0.22
- -0.41 1.84 -0.74 -1.67 -0.38
-0.32 0.37 - - 0.05 1.52
- - 1.29 - -0.31 1.46
- -0.08 1.76 - -0.53 -0.05
0.93 0.64 1.34 - - -
- - 1.96 - - 1.09
1.37 - 1.77 - - -
- - 1.52 - - 1.65
- -0.19 0.5 - 1.48 -0.12
-0.68 0.13 -0.1 0.06 0.08 0.32
- 0.93 0.63 1.03 -0.97 -
- 1.24 - - 0.17 1.33
1.37 - 1.77 - - -
- 1.2 1.89 - - -
- 1.11 - - - 1.94
-0.5 -0.48 0.85 0.47 -0.54 -0.5
- 1.02 - - 1.12 0.85
-0.62 0.42 0.36 -0.13 -0.39 0.07
-0.58 1.08 1.04 -2.35 -1.79 -0.57
- 1.66 1.05 - -0.37 -
- - 1.86 - 1.25 -
0.21 - 0.6 - 1.32 -0.27
-1.43 0.86 0.84 0.38 -1.63 -1.3
-0.5 0.27 0.87 -1.09 -0.37 0.03
- 0.48 1.32 0.58 -0.72 -
0.6 -0.69 1.0 -0.6 -0.61 -0.87
- 0.73 1.42 - 0.23 -1.03
- - 1.68 - 0.08 0.81
- - 1.37 0.79 0.76 -
-0.21 -0.15 0.47 -0.18 -0.2 0.14
-1.32 1.19 0.9 -0.6 -1.52 -1.21
-1.66 0.11 1.13 -0.04 -0.77 -0.22
1.3 -0.58 1.11 -0.49 - -
- 1.09 1.52 -1.46 - -0.62
- 0.1 0.8 -0.38 0.19 0.35
- 1.67 - - - 1.5
0.5 1.32 -0.11 -1.71 -1.7 -0.85
-1.29 - 1.36 -0.47 0.5 -0.17
-0.23 -0.09 0.39 0.08 0.15 -0.44
- -0.41 1.29 -0.32 1.0 -
-0.84 0.37 0.76 -0.3 -0.54 -0.06
- - 1.6 - 1.57 -
- -0.2 1.5 - 0.47 -0.12
- 0.51 1.21 - 1.18 -
- 0.4 1.98 - - -0.45
-0.83 0.34 0.33 0.18 0.2 -0.64
-2.09 0.03 1.27 1.04 -3.29 -2.56
-0.35 0.21 0.13 0.06 -0.08 -0.04
-6.42 - 1.76 - - 1.37
- 0.05 0.74 - 1.72 -
- - 0.97 - 0.36 1.46
- - 1.52 - - 1.65
- 1.31 - - 0.41 1.14
- - 1.38 - 1.77 -
-0.85 - 1.08 -0.68 -17.04 1.44
- 1.74 1.41 - - -
-0.15 0.56 0.58 -0.34 -0.61 -0.53
-0.87 0.45 0.5 0.33 -0.87 -0.19
- 0.51 1.2 0.6 -0.4 -
- - 1.52 - - 1.65
- -1.48 0.21 - 1.41 0.87
-0.24 -0.98 0.59 0.05 0.14 0.0
-0.25 0.23 0.0 0.24 -0.16 -0.15
-1.51 1.44 1.0 -0.93 -1.32 -
-0.34 0.25 0.17 0.25 -0.26 -0.19
-0.52 -0.94 0.12 -0.39 1.27 -0.93
-1.36 0.46 0.62 -1.54 0.24 0.23
-0.58 0.05 0.58 -0.07 -0.06 -0.18
-0.26 -0.04 0.4 0.3 -0.32 -0.24
- - 1.07 - 1.23 0.64
- 1.67 - - - 1.5
- - 1.95 - - 1.09
0.3 1.08 1.15 - -1.18 -
-0.6 -0.9 -0.21 0.2 0.77 0.11
- 0.5 2.2 - - -
0.15 0.66 0.6 -1.55 -0.24 -0.72
-0.3 0.14 - - 0.08 1.6
-0.84 -0.14 0.47 -0.03 0.6 -0.6
-0.71 -0.29 0.92 -1.52 0.68 -0.44
- 0.85 1.55 - -1.05 -0.32
-1.59 -0.3 -0.19 -0.19 1.01 0.13
- 1.5 1.08 -0.5 -1.52 -
- 1.3 1.52 - -0.6 -
- 1.11 - - - 1.94
- - 1.52 - - 1.65
- - 1.96 - - 1.09
- 1.67 - - - 1.5
- -0.75 1.53 - 1.33 -
- -0.75 1.53 - 1.33 -
0.16 -0.14 0.55 - 0.77 -0.32
- -0.53 0.4 -0.45 1.0 0.32
1.46 - 1.7 - - -
- - 1.06 0.48 0.45 0.19
- - 1.2 - 1.89 -
- 1.2 0.9 0.29 -0.7 -
-0.33 0.65 0.76 -0.47 -1.14 -0.39
- 1.14 0.25 -0.35 0.23 -0.62
- - 1.6 - 1.57 -
- - 0.35 - 1.74 0.48
-0.36 -0.12 0.42 0.31 -0.03 -0.42
-1.21 -0.51 1.09 -0.41 -0.1 0.07
-1.09 0.2 0.9 -0.28 0.03 -0.56
-0.74 0.55 1.24 0.08 -0.94 -
- 0.18 1.32 0.92 -1.09 -
- - 1.37 0.79 0.76 -
- - 1.86 - 1.25 -
- 1.31 - - 0.41 1.14
- 1.67 - - - 1.5
- 1.2 1.89 - - -
0.01 0.38 0.55 -1.14 -0.33 -0.03
-0.35 -0.42 0.8 -0.54 0.03 0.02
-2.52 0.5 0.83 0.6 -0.73 -0.93
-0.1 -0.4 0.3 - 0.69 0.56
1.12 - 1.52 - -0.07 -
- 1.35 1.05 0.47 - -
- 1.11 0.22 -0.36 - 0.93
- - 1.68 - 0.08 0.81
- 0.13 0.83 0.25 - 0.96
-0.46 -0.22 0.68 0.18 0.07 -0.67
- -0.14 1.03 -0.78 0.94 -0.89
- 1.66 - - - 1.5
-0.5 -0.54 -0.04 -0.11 0.66 0.18
-0.56 -0.17 0.38 -0.17 0.04 0.28
- 0.69 2.13 - - -
-1.66 0.76 0.85 0.47 -1.45 -1.19
- 0.34 - - 0.44 1.75
0.14 0.41 -0.05 -0.07 -0.65 0.03
0.02 0.87 0.19 -0.09 -1.03 -0.78
- 0.77 1.47 - - 0.6
- 0.96 0.91 -0.67 0.63 -
- 1.73 1.42 - - -
-0.34 -0.64 1.52 - 0.04 -0.57
- 0.23 1.39 0.92 -1.67 -
-0.32 -0.05 0.67 0.37 -0.46 -0.7
- 1.03 1.53 - - 0.1

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.