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Heatmap: Cluster_13 (HCCA clusters)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
4 h after light
8 h after light
12 h after light
4 h after dark
8 h after dark
12 h after dark
- - - 1.61 1.56 -
- 1.86 1.24 - - -
2.58 - - - - -
2.58 - - - - -
2.58 - - - - -
1.62 - - 0.51 0.59 -
1.26 - - 0.81 0.89 -
1.43 - - 0.63 0.81 -
- - - 1.59 - 1.57
- 0.09 0.55 0.29 0.96 -1.73
- - - 1.65 0.9 0.01
2.05 - - - 0.88 -
- - - - - -
0.76 - - 1.09 0.17 0.07
- - - 2.01 - 0.99
- 0.74 - 1.5 0.59 -
- - - 2.01 - 0.99
0.17 -0.07 -0.13 0.06 0.03 -0.08
- - - 1.23 1.32 0.21
- - - 1.54 1.63 -
0.5 -0.8 -0.08 -0.05 0.24 -0.13
- 0.12 -1.78 0.87 -1.95 1.34
1.92 -0.22 -2.72 -2.24 -2.26 -0.35
2.31 -0.24 - - -3.27 -3.29
- - - 1.97 1.05 -
- 1.86 1.24 - - -
1.46 -0.37 -1.16 - 0.62 -1.05
-0.85 -0.96 0.48 0.1 0.74 -0.32
1.02 - - 0.57 0.81 -0.43
2.58 - - - - -
1.98 - - - 0.47 -0.57
1.29 - - 0.95 - 0.69
- - - 1.54 1.63 -
-13.49 - - 1.16 1.91 -
1.08 - - 0.7 1.18 -
1.44 - 0.34 -0.03 0.07 -
- - - 2.01 - 0.99
- - - - - -
- - - 1.35 - 1.79
- - - 2.01 - 0.99
- - - 0.55 1.63 0.53
2.58 - - - - -
2.41 - - - - -0.52
2.05 - - - 0.88 -
0.11 - - 0.45 1.53 -0.57
0.51 - - 0.84 0.92 -0.18
- - - 1.63 - 1.53
- - 0.99 0.65 0.73 -0.37
1.78 - - - 1.36 -
0.98 - - 0.85 - 1.15
1.55 - - 0.73 -0.07 -1.13
1.39 - - 0.72 0.8 -
0.74 - - 1.07 1.15 -
2.28 0.21 - - - -
2.01 - - - 0.42 -0.68
0.29 - - 0.62 1.7 -
0.38 1.51 0.88 - - -
2.03 -0.26 -1.82 -2.76 -2.24 -1.16
1.04 - - 1.37 0.45 -
-0.11 0.27 -0.89 0.45 0.81 -2.25
- - - 2.01 - 0.99
- - 1.26 0.0 1.08 -1.02
- - - 1.59 - 1.57
-0.3 -0.65 0.11 -0.16 1.37 -
2.58 - - - - -
- - - - - -
0.08 0.2 - -0.59 1.49 -1.61
- 1.96 1.08 - - -
- - - 1.44 - 1.72
- - - 1.59 - 1.57
- 1.86 1.24 - - -
1.39 - - 0.72 0.8 -
2.56 - -3.11 - - -
-0.7 0.34 0.18 -0.16 0.51 -0.59
2.58 - - - - -
- -6.46 -16.26 1.31 1.81 -13.33
0.5 0.11 -0.68 -0.69 -0.39 0.58
- 1.86 1.24 - - -
0.42 - -1.23 0.92 0.68 -0.44
- - 0.98 0.69 0.72 -0.38
2.13 - - - 0.7 -
- - - 1.98 0.48 -0.62
2.42 - - - - -0.59
- - - 2.01 - 0.99
1.59 -0.91 0.23 - 0.05 -2.05
- - - 1.54 1.63 -
2.3 -1.1 - -4.08 -2.57 -1.4
- - - 0.98 1.06 0.96
- - - 1.71 0.93 -0.31
2.58 - - - - -
2.58 - - - - -6.07
- 2.21 - - - 0.47
- - - 1.89 - 1.19
1.45 - - 0.86 - 0.52
- 1.51 - 0.02 1.1 -
- - - 2.01 - 0.99
2.19 -0.52 - - - -0.42
- - - 2.01 - 0.99
- - - - - -
- 1.91 1.17 - - -
- - - 1.54 1.63 -
- - - 1.54 1.63 -
1.95 - 0.13 - 0.04 -
- - - 1.98 - 1.03
2.58 - - - - -
- - - 0.98 1.06 0.96
- - -13.2 1.66 -2.15 1.39
0.33 -0.92 -0.96 -0.15 0.41 0.57
- - 0.99 0.65 0.73 -0.37
- - - 2.01 - 0.99
2.23 - - - 0.4 -
1.54 - 0.73 - -0.06 -1.06
-0.56 0.67 0.04 1.43 - -
-0.04 1.4 1.26 -28.94 -18.72 -13.65
0.71 -2.46 -20.91 0.95 -0.51 0.63
-1.68 -1.2 0.92 -0.21 0.43 0.2
-0.34 0.32 -2.14 0.54 0.64 -0.47
-0.47 -0.35 0.45 0.88 0.36 -15.63
-22.98 -17.87 2.56 -3.13 -19.22 -17.55
0.44 1.44 0.95 - - -
1.67 - - 0.45 0.53 -
- - - 0.37 2.07 -0.99
- - - - - -
- - - 2.01 - 0.99
1.01 -5.98 - 1.34 -5.02 0.5
-0.97 0.75 -0.23 -0.72 0.33 0.13
- - - 1.54 1.63 -
-0.7 -0.13 -0.1 0.57 0.34 -0.34
- - - 1.25 1.86 -
2.08 - -0.51 -0.48 -7.54 -1.46
- - - 2.01 - 0.99
- - - - - -
0.74 0.42 0.45 -2.46 0.19 -1.74
- -0.08 -0.51 1.39 -0.12 -0.31
0.46 - - 1.0 1.09 -1.02
2.58 - - - - -
0.37 -0.76 0.27 1.31 - -1.22
- - 1.14 0.88 0.96 -
-2.0 -2.33 0.82 0.16 0.75 -0.03
2.01 - - - 0.97 -
1.15 - - 0.74 0.55 -0.65
- 1.78 1.36 - - -
- - - 2.01 - 0.99
- 2.19 0.53 - - -
- - - 1.54 1.63 -
- - - 2.01 - 0.99
- - - 0.52 2.19 -
- - - 1.59 - 1.57
- - - 2.01 - 0.99
- - - 1.78 1.35 -
1.11 - - 0.62 1.2 -
- -0.22 -0.67 1.21 0.92 -1.72
- - - 2.01 - 0.99
1.92 - - - 1.15 -
1.86 - - 0.2 0.28 -
1.64 0.05 -1.91 -1.59 -0.67 -0.7
- - - 2.0 - 1.0
0.74 - - 1.07 1.15 -
- 1.86 1.24 - - -
2.09 - - - 0.26 -0.84
- - - 1.59 - 1.57
0.07 -0.12 -0.02 0.09 0.04 -0.06
- - - - - -
- 1.86 1.24 - - -
1.58 - - -0.38 0.88 -1.33
- - - 0.98 1.06 0.96
-0.63 0.18 -1.86 0.65 1.11 -2.22
0.78 - - 1.11 - 1.09
- - - 1.54 1.63 -
- - - 2.01 - 0.99
1.26 - - 0.81 0.89 -
- - - 1.54 1.63 -
- - - 1.14 1.23 0.54
- - - 2.01 - 0.99
- - - 1.66 - 1.51
- - - 2.01 - 0.99
1.47 -0.44 -1.49 -1.19 -0.28 -0.2
0.78 - - 1.11 - 1.09
- - 1.19 0.85 0.93 -
- - -0.87 0.83 1.88 -
2.12 - - - 0.72 -
0.07 - - 0.9 1.63 -
- - - 1.67 1.5 -
- - - 0.67 2.14 -
2.29 -0.39 - - - -1.52
- - - 0.98 1.06 0.96
2.58 - - - - -
2.18 -1.19 - - -1.23 -0.75

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.