Heatmap: Cluster_2 (HCCA clusters)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
4 h after light
8 h after light
12 h after light
4 h after dark
8 h after dark
12 h after dark
1.05 -0.35 -1.9 -1.31 0.08 0.5
0.99 -0.67 -1.31 -0.92 0.05 0.5
1.17 -0.65 -2.34 -1.33 -0.22 0.74
0.42 -0.25 -0.34 -0.45 0.1 0.3
0.7 -0.34 -0.64 -0.2 -0.13 0.22
0.87 -0.38 -0.92 -0.41 -0.15 0.28
0.5 -0.33 -0.47 -0.45 0.12 0.32
0.73 -0.36 -1.4 -0.78 0.19 0.54
0.56 -0.09 -0.86 -0.32 0.07 0.25
1.02 -0.66 -1.49 -0.61 -0.0 0.41
0.59 -0.3 -0.62 -0.37 -0.0 0.33
- - - - - 2.58
- - - - - 2.58
- - - - - 2.58
1.03 -0.39 -2.03 -1.51 -0.01 0.68
0.81 -0.67 -1.02 -1.28 0.18 0.66
0.43 -0.07 -0.25 -0.34 -0.09 0.17
0.58 -0.33 -0.36 -0.49 -0.2 0.43
0.42 -0.26 -0.29 -0.44 0.0 0.34
- - - - - 2.58
0.86 -0.42 -1.1 -0.73 -0.13 0.54
0.96 -0.41 -1.27 -0.75 -0.03 0.39
0.45 -0.18 -0.43 -0.27 0.04 0.21
- - - - - 2.58
- - - - - 2.58
0.81 -0.36 -1.18 -0.13 -0.29 0.37
0.63 -0.28 -0.68 -0.45 -0.13 0.43
0.87 -0.55 -0.85 -0.72 0.03 0.38
1.25 -0.75 -1.7 -1.08 -0.4 0.57
1.07 -0.17 -2.05 -1.18 -0.28 0.59
0.56 -0.2 -0.7 -0.34 0.05 0.27
0.41 -0.15 -0.24 -0.26 -0.09 0.2
1.01 -0.46 -2.14 -1.41 0.09 0.66
0.91 -0.36 -1.41 -0.74 -0.11 0.53
0.72 -0.23 -0.71 -0.82 0.02 0.37
1.16 -0.94 -2.09 -1.88 0.34 0.55
0.73 -0.15 -0.92 -0.56 -0.04 0.34
0.96 -0.28 -0.86 -1.32 -0.38 0.6
0.52 -0.24 -0.45 -0.53 0.11 0.27
0.45 -0.34 -0.46 -0.51 0.12 0.41
- - - - - 2.58
0.72 -0.18 -0.88 -0.46 -0.12 0.36
- - - - - 2.58
- - - - - 2.58
- - - - - 2.58
1.47 -1.29 -1.6 -1.64 -0.68 0.63
1.24 -0.56 -1.88 -1.12 -0.52 0.61
0.1 0.08 0.03 -0.86 0.68 -0.51
0.65 -0.25 -0.68 -0.8 0.12 0.39
0.65 -0.25 -0.68 -0.8 0.12 0.39
1.1 -0.62 -1.23 -1.04 -0.08 0.44
1.43 -1.69 -2.57 -1.84 0.14 0.54
1.21 -0.66 -1.9 -1.15 -0.11 0.49
0.66 -0.37 -0.86 -0.61 0.1 0.45
- - -4.62 - - 2.58
- - - - - 2.58
1.31 -0.8 -2.13 -1.3 -0.44 0.65
0.78 -0.31 -0.73 -0.51 -0.24 0.4
1.11 -0.85 -2.04 -1.1 0.08 0.6
1.28 -0.72 -2.1 -1.87 0.15 0.44
0.75 -0.13 -1.01 -0.66 -0.13 0.45
0.76 -0.24 -0.83 -0.54 0.0 0.27
0.5 -0.41 -0.43 -0.29 0.02 0.33
0.6 -0.35 -0.5 -0.4 0.06 0.25
1.17 -0.83 -1.89 -1.37 0.16 0.5
0.86 -0.46 -1.31 -0.55 -0.11 0.54
0.53 -0.35 -0.69 -0.49 0.13 0.42
0.17 -0.24 0.14 0.21 -0.45 0.06
1.13 -0.32 -1.67 -1.38 -0.03 0.41
1.37 -0.88 -2.68 -1.4 -0.54 0.72
- - - - - 2.58
- - - - - 2.58
- - - - - -
- - - - - 2.58
- - - - -21.94 2.58
0.88 -0.36 -1.58 -0.69 0.1 0.44
- - - - - 2.58
- - - - - 2.58
1.39 -1.17 -2.7 -1.41 -0.55 0.79
0.51 -0.13 -0.4 -0.45 0.0 0.23
0.53 -0.21 -0.51 -0.32 -0.02 0.26
0.87 -0.08 -1.27 -1.04 0.01 0.39
0.76 -0.41 -1.0 -0.68 -0.05 0.55
0.93 -0.26 -1.41 -0.49 -0.36 0.47
0.64 -0.16 -0.65 -0.59 -0.12 0.4
1.05 -0.95 -1.27 -1.43 0.05 0.67
0.78 -0.67 -1.21 -0.61 0.1 0.58
1.26 -0.6 -1.8 -1.53 -0.17 0.52
0.76 -0.23 -0.65 -0.58 -0.05 0.24
0.94 -0.53 -1.14 -0.25 -0.17 0.28
0.97 -0.46 -1.64 -0.25 -0.32 0.44
0.88 -0.66 -1.14 -0.41 -0.14 0.5
0.77 -0.52 -1.02 -0.82 0.13 0.53
0.92 -0.32 -0.81 -0.88 -0.11 0.35
0.45 -0.21 -0.3 -0.27 -0.02 0.19
0.74 -0.34 -0.71 -0.59 -0.1 0.4
0.72 -0.37 -0.72 -0.3 0.01 0.21
- - - - - 2.58
0.21 -0.11 -0.16 -0.14 0.01 0.15
- - - - - 2.58
- - - - - 2.58
- - - - - 2.58
- - - - - 2.58
0.77 -0.29 -0.78 -0.32 -0.16 0.26
0.68 -0.41 -0.88 -0.55 0.02 0.5
1.61 -1.09 -2.35 -3.67 -0.56 0.6
1.1 -0.44 -1.34 -1.25 -0.24 0.55
1.23 -0.83 -2.25 -1.15 -0.4 0.74
0.51 -0.36 -0.49 -0.2 -0.02 0.29
0.56 -0.04 -0.57 -0.42 -0.18 0.32
0.6 -0.14 -0.41 -0.47 -0.09 0.22
1.35 -1.15 -2.34 -3.06 -0.33 0.91
0.75 -0.4 -0.58 -0.56 0.02 0.26
0.47 -0.15 -0.37 -0.23 -0.04 0.15
1.41 -0.73 -2.39 -1.71 -0.36 0.55
0.76 -0.39 -0.84 -0.76 0.05 0.45
0.64 -0.2 -0.66 -0.6 0.06 0.3
- - - - - 2.58
- - - - - 2.58
0.7 -0.27 -0.73 -0.4 -0.07 0.29
0.68 -0.22 -0.52 -0.38 -0.06 0.15
- - - - - 2.58
-10.09 -2.75 -7.88 2.01 -0.34 0.04
0.55 -0.38 -0.74 -0.5 0.12 0.46
0.76 -0.27 -1.06 -0.66 -0.11 0.53
1.12 -0.91 -2.03 -0.5 -0.19 0.55
1.0 -0.47 -1.03 -0.71 -0.15 0.35
0.5 -0.13 -0.53 -0.26 -0.03 0.22
0.79 -0.42 -0.91 -0.48 -0.24 0.52
0.73 -0.26 -0.77 -0.42 -0.17 0.36
0.6 -0.18 -0.8 -0.44 -0.06 0.42
- - - - -1.89 2.52
1.21 -0.62 -2.38 -1.55 -0.24 0.73
0.62 -0.24 -0.6 -0.65 0.04 0.36
0.35 -0.1 -0.23 -0.21 -0.05 0.14
0.67 -0.59 -0.49 -0.82 0.04 0.52
0.94 -0.04 -0.9 -1.78 -0.59 0.69
- - - - - 2.58
- - -0.45 -7.56 -10.06 2.4
- - - - - 2.58
0.51 -0.03 -0.54 -0.29 -0.05 0.16
0.42 -0.39 -0.34 -0.35 0.13 0.3
- - - - - 2.58
- - - - - 2.58
0.56 -0.29 -0.41 -0.32 -0.02 0.22
0.54 -0.3 -0.51 -0.32 0.03 0.28
1.31 -0.96 -1.46 -1.17 -0.45 0.55

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.