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Heatmap: Cluster_3 (HCCA clusters)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
4 h after light
8 h after light
12 h after light
4 h after dark
8 h after dark
12 h after dark
0.08 1.24 0.05 -1.63 -1.93 -0.06
0.44 1.21 -0.11 -1.36 -1.56 -0.57
0.54 0.97 -0.49 -1.17 -0.8 -0.22
1.36 1.33 - - -1.08 -1.18
0.4 1.6 -0.08 -2.89 -4.51 -0.93
0.94 0.92 -0.79 -1.15 -1.91 -0.15
-0.0 1.17 0.21 -1.04 -1.32 -0.5
0.56 1.01 -0.5 -0.89 -1.45 -0.14
0.08 0.17 0.02 -0.18 -0.12 -0.01
0.36 0.09 -0.09 -0.25 -0.07 -0.11
0.29 0.84 -0.1 -0.71 -0.67 -0.31
0.62 0.98 -0.92 -1.37 -1.1 0.15
0.53 0.57 -0.24 -0.77 -0.59 -0.04
0.76 1.52 -0.93 -3.16 -2.0 -0.82
0.98 1.35 -0.7 -3.22 -1.54 -1.26
0.37 1.1 1.01 -2.01 -3.8 -2.09
1.17 1.51 -0.98 -3.4 -3.45 -2.23
1.36 1.33 - - -1.08 -1.18
0.7 1.46 0.24 -2.11 -4.49 -2.48
0.67 0.83 -0.57 -1.18 -0.39 -0.43
0.87 1.43 -0.76 -1.37 -2.19 -1.89
0.54 1.49 0.79 - - -
0.24 0.68 -0.12 -0.61 -0.47 -0.13
0.36 0.74 -0.1 -0.61 -0.61 -0.31
0.81 1.07 -0.23 -2.1 -2.38 -0.19
0.14 0.24 -0.2 -0.05 -0.15 -0.03
0.24 0.4 0.11 -0.42 -0.33 -0.18
0.61 0.73 -0.38 -0.81 -0.81 -0.14
0.31 1.55 -0.2 -1.71 -2.75 -0.96
0.09 0.62 -0.04 -0.53 -0.42 -0.01
0.92 1.15 -0.28 -3.55 -4.29 -0.1
1.08 1.08 -0.32 -4.55 - -0.1
0.39 1.15 0.96 -1.98 -4.73 -2.13
0.33 1.34 0.99 -3.38 -7.05 -2.93
1.02 1.08 -0.07 -3.0 -3.44 -0.53
0.58 0.6 0.01 -0.69 -0.44 -0.66
0.37 0.42 0.05 -0.27 -0.45 -0.37
1.14 1.02 -1.33 -1.72 -1.87 -0.33
0.6 0.7 -0.13 -1.21 -0.82 -0.06
0.1 1.13 -0.33 -0.77 -0.83 -0.32
1.16 0.67 -1.09 -1.16 -1.46 -0.14
0.56 0.32 -0.3 -0.31 -0.23 -0.31
1.42 1.55 -2.47 -5.18 -4.47 -2.86
0.63 0.79 -0.9 -0.48 -0.8 -0.15
0.6 0.84 0.48 -1.02 -2.33 -0.74
0.84 0.76 0.34 -1.57 -2.47 -0.45
0.41 1.32 0.44 -1.2 -3.03 -1.9
0.2 1.36 -0.01 -1.44 -1.87 -0.62
0.57 1.45 0.04 -2.48 -3.03 -1.13
0.38 0.3 -0.04 -0.38 -0.42 -0.03
0.72 0.35 -0.3 -0.45 -0.45 -0.31
1.11 0.5 -0.74 -1.0 -1.17 -0.19
0.71 1.61 -1.26 -3.31 -4.42 -0.42
0.68 1.73 -0.3 -3.14 -2.65 -
1.06 1.37 -1.0 -3.85 -3.23 -0.63
0.88 1.15 -1.04 -2.2 -0.94 -0.46
1.06 1.37 -0.78 -3.47 -3.03 -0.87
0.73 0.94 -0.12 -1.42 -1.56 -0.33
0.7 0.67 -0.25 -0.97 -0.97 -0.12
0.53 0.64 0.0 -0.76 -0.86 -0.24
0.47 0.54 0.11 -0.86 -0.69 -0.14
0.32 0.86 0.15 -1.13 -0.56 -0.56
1.03 1.12 -1.13 -2.16 -2.2 -0.17
0.95 0.69 -0.26 -1.36 -1.25 -0.3
0.28 0.82 0.47 -0.68 -1.58 -0.56
0.59 1.22 0.39 -1.74 -2.59 -1.34
0.96 1.33 -0.66 -1.69 -2.95 -1.13
0.32 1.22 -0.22 -1.91 -1.51 -0.07
0.54 0.79 -0.69 -1.07 -0.44 -0.02
0.53 1.19 -1.34 -1.22 -0.73 -0.24
0.24 0.26 0.11 -0.34 -0.39 -0.01
1.03 1.09 -1.24 -1.96 -1.78 -0.23
0.59 0.86 -0.36 -1.61 -0.59 -0.13
0.47 0.72 0.21 -1.27 -0.85 -0.26
0.89 0.77 -0.33 -1.71 -1.29 -0.1
1.14 0.85 -0.14 -4.13 -1.77 -0.43
0.67 0.82 -0.29 -1.26 -0.95 -0.17
0.59 0.72 0.57 -1.86 -2.07 -0.22
0.2 0.4 0.15 -0.29 -0.51 -0.15
1.12 1.49 -1.39 -4.49 -3.08 -1.09
0.2 0.65 -0.08 -0.55 -0.33 -0.23
0.07 -0.02 -0.02 -0.47 0.12 0.23
0.37 0.56 -0.49 -0.52 -0.23 -0.05
1.1 1.37 -2.19 -3.87 -3.27 -0.19
0.58 0.59 -0.2 -0.89 -0.67 -0.07
0.68 1.7 -0.14 - - -2.16
0.48 1.04 0.67 -1.68 -2.24 -1.19
0.25 0.31 -0.16 -0.16 -0.24 -0.09
0.35 0.31 0.02 -0.47 -0.29 -0.12
1.36 1.33 - - -1.08 -1.18
0.37 0.37 -0.12 -0.39 -0.21 -0.21
0.89 0.6 0.01 -1.64 -1.19 -0.23
0.62 0.89 -0.34 -1.04 -0.93 -0.3
1.36 1.33 - - -1.08 -1.18
0.17 0.49 -0.23 -0.1 -0.34 -0.15
0.32 0.81 0.06 -0.79 -0.54 -0.54
0.27 0.38 -0.12 -0.4 -0.33 0.02
0.21 0.17 -0.08 -0.22 -0.13 0.0
0.36 0.77 -0.24 -0.7 -0.85 -0.01
0.78 1.09 -1.01 -1.54 -1.52 -0.06
0.46 0.44 -0.06 -0.8 -0.52 0.05
1.03 1.14 -2.03 -2.47 -2.96 0.27
1.27 0.99 -0.51 -2.53 -1.69 -1.25
-0.24 1.56 0.12 -1.93 -2.24 -0.66
0.67 0.96 -0.48 -1.39 -0.9 -0.27
1.23 1.1 -1.38 -3.5 -1.17 -0.77
0.39 0.84 -0.16 -1.27 -0.72 -0.04
0.61 0.88 0.19 -1.28 -1.47 -0.48
0.75 1.09 0.1 -2.04 -2.54 -0.5
0.86 1.68 -1.06 -4.08 -4.15 -1.39
1.17 1.46 -2.68 - -1.18 -1.29
0.49 0.27 -0.55 -0.12 -0.14 -0.18
0.43 0.68 -0.26 -0.65 -0.32 -0.37
0.46 1.35 -0.69 -1.6 -1.8 -0.27
0.46 1.4 -0.72 -1.87 -1.69 -0.32
1.07 1.61 -1.64 -2.33 -2.63 -2.65
0.6 0.89 0.12 -0.51 -1.88 -0.82
0.47 0.43 0.28 -0.68 -0.78 -0.24
1.29 1.39 -1.11 -7.27 -3.18 -1.55
0.21 0.4 0.16 -0.5 -0.27 -0.2
0.71 1.02 0.77 -2.52 -3.8 -1.38
0.85 1.04 0.79 -2.1 -5.43 -2.73
1.63 1.07 -2.61 -3.47 - -0.89
0.22 0.47 -0.41 -0.33 -0.18 0.03
0.11 1.76 -0.39 -3.08 -2.48 -1.12
0.75 0.36 -0.16 -0.77 -0.74 -0.06
1.19 -0.3 0.27 -1.55 -1.17 -0.13
0.08 1.04 -0.06 -1.03 -0.83 -0.2
1.16 0.87 -0.93 -0.89 -1.99 -0.67
1.03 1.22 -1.43 -3.0 -2.12 -0.15
0.58 0.38 -0.04 -0.72 -0.46 -0.15
0.55 1.04 -0.3 -0.89 -0.93 -0.72
0.92 1.18 -0.78 -2.33 -2.28 -0.25
0.49 1.77 -0.42 -5.55 -5.58 -1.37
0.51 1.72 -0.81 -2.68 -1.97 -1.67
0.26 1.52 -0.17 -2.04 -2.33 -0.71
0.13 1.47 0.02 -1.84 -1.96 -0.74
0.45 0.87 0.24 -0.99 -1.0 -0.67
1.28 1.45 -2.16 -2.13 -3.4 -1.72
0.45 0.33 -0.03 -0.47 -0.52 -0.03
0.78 0.55 -0.0 -1.09 -1.18 -0.13
1.01 1.53 -1.82 -3.08 -2.92 -0.83
0.86 0.78 -0.26 -1.37 -1.43 -0.18
0.37 0.49 -0.05 -0.51 -0.42 -0.18
0.68 0.93 0.02 -1.47 -1.79 -0.27
0.32 0.14 -0.19 -0.18 -0.11 -0.05
0.38 0.83 0.35 -0.92 -1.11 -0.62
0.24 0.45 0.24 -0.46 -0.67 -0.14
0.49 0.47 -0.03 -0.76 -0.47 -0.12
0.16 0.4 0.23 -0.32 -0.47 -0.2
1.01 0.48 -1.4 -0.64 -0.61 -0.13
1.48 1.26 - -1.82 -2.24 -1.59
0.26 0.13 0.01 -0.28 -0.15 -0.03
0.45 0.81 -0.59 -1.35 -0.52 0.19
0.46 0.41 -0.16 -0.71 -0.32 -0.01
0.82 1.17 0.06 -2.24 -1.81 -1.17
0.05 1.51 -0.57 -1.16 -1.59 -0.58
0.41 1.03 0.07 -1.82 -1.03 -0.31
0.53 0.77 0.08 -0.75 -0.99 -0.52
0.71 1.62 -1.12 -2.92 -2.75 -0.86
0.28 0.39 0.06 -0.35 -0.43 -0.14
0.65 1.29 -0.61 -1.83 -2.27 -0.24
0.33 0.8 -0.11 -0.57 -0.64 -0.4
1.15 1.19 -1.61 -2.16 -2.94 -0.29
0.96 1.5 -1.61 -3.55 -2.96 -0.55
1.0 0.76 -0.5 -2.06 -1.31 -0.06
0.27 0.57 0.15 -0.42 -0.59 -0.37
1.34 0.85 -0.26 -2.53 -1.7 -1.5
0.2 1.32 -0.21 -1.67 -1.01 -0.56
0.67 1.12 0.03 -2.33 -1.69 -0.49
0.43 1.08 -0.75 -1.15 -1.22 0.09
1.15 1.05 -1.19 -1.84 -2.46 -0.31
0.45 0.63 0.15 -0.74 -0.85 -0.28
0.63 0.36 -0.41 -0.31 -0.4 -0.24
1.14 1.47 -1.01 -4.23 -2.58 -1.76
0.32 1.03 -0.62 -0.87 -0.65 -0.19
1.52 1.02 -2.67 -2.81 -2.13 -0.79
1.29 1.57 -3.72 -2.87 -6.62 -1.45
0.3 0.28 -0.11 -0.26 -0.2 -0.11
0.84 1.58 -0.49 -2.03 -2.42 -3.75
0.44 0.72 0.05 -0.96 -0.92 -0.13
0.61 0.71 0.04 -1.4 -0.38 -0.59
0.5 0.99 0.54 -2.05 -1.64 -0.78
0.34 0.41 -0.16 -0.52 -0.44 0.11
0.32 1.77 -0.24 -5.82 -2.67 -1.68
0.28 0.15 -0.08 -0.26 -0.13 -0.03
0.6 0.72 -0.3 -1.07 -0.87 0.01
0.55 0.47 0.14 -0.93 -0.92 -0.02
0.81 0.88 -0.74 -1.52 -1.62 0.19
0.92 0.97 -1.0 -0.85 -2.21 -0.18
0.67 1.0 0.19 -1.79 -1.55 -0.67
0.55 0.31 0.1 -0.6 -0.4 -0.3
0.73 0.7 0.32 -1.5 -1.67 -0.32
0.21 0.95 0.11 -0.79 -0.86 -0.52
0.33 0.64 -0.26 -0.47 -0.51 -0.11
0.66 1.21 -1.04 -1.53 -1.76 -0.03
0.6 1.28 -0.11 -2.4 -2.02 -0.54
1.37 0.94 -0.58 -3.28 -3.04 -0.74
1.11 1.03 -1.63 -1.37 -1.46 -0.45
0.57 1.08 -0.36 -1.1 -1.08 -0.55
0.75 0.91 0.21 -4.44 -2.87 0.13
1.28 0.73 -0.96 -2.33 -0.86 -0.63
0.91 1.04 0.2 -3.04 -4.59 -0.41
0.32 1.46 0.0 -2.97 -3.29 -0.38
0.72 0.56 -0.24 -1.1 -0.75 -0.03
0.34 1.38 -0.27 -1.53 -1.27 -0.87
0.48 1.17 0.68 -1.39 -2.71 -2.12
1.62 1.55 - - - -
1.36 1.49 -0.85 -4.72 -6.87 -5.58
0.58 1.07 0.72 -2.05 -4.02 -1.13
0.3 0.25 -0.04 -0.4 -0.33 0.07
-0.04 0.9 0.14 -0.6 -0.59 -0.43
0.55 0.58 -0.06 -1.21 -0.79 0.1
0.47 0.52 0.08 -1.08 -0.7 0.05
0.43 0.97 0.74 -1.61 -2.49 -0.93
0.31 1.07 0.81 -1.16 -2.61 -1.82
0.26 0.97 -0.21 -0.95 -0.71 -0.23
0.35 0.51 0.26 -1.11 -0.8 0.09
1.12 1.94 - - - -
0.13 0.56 0.2 -0.41 -0.36 -0.41
0.42 0.49 -0.04 -0.36 -0.78 -0.11
-0.1 0.71 -0.13 -0.43 -0.38 0.01
-0.05 1.13 0.07 -0.79 -1.19 -0.38
- - - - - -
0.74 -0.58 -1.21 - -1.3 1.5
1.01 0.69 -1.31 -1.12 -0.19 -0.64
0.91 1.47 -1.01 -1.78 -2.61 -1.37
0.66 1.24 0.14 -2.78 -2.04 -0.8

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.