Heatmap: Cluster_25 (HCCA clusters)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	4 h after light	8 h after light	12 h after light	4 h after dark	8 h after dark	12 h after dark
Sopen00g007320	-	-	-	-	-	2.58
Sopen00g008040	-	-	-	-	-	2.58
Sopen00g010870	-	-	-	-	-	2.58
Sopen00g011290	-	-	-	-	-	2.58
Sopen01g002690	-0.12	-0.31	0.15	0.07	0.24	-0.12
Sopen01g006540	-	-	-	-	-	2.58
Sopen01g008760	-	-	-	-	-	2.58
Sopen01g011350	-	-	-	-	-	2.58
Sopen01g012260	-	-	-	-	-	2.58
Sopen01g012810	-	-	-	-	-	2.58
Sopen01g013880	-	-	-	-	-	2.58
Sopen01g013880	1.68	-	-	-	-	1.48
Sopen01g013880	-0.92	1.67	-	-0.3	-0.27	-0.6
Sopen01g013980	-	-	-	-	-	2.58
Sopen01g015360	-	0.94	0.16	1.07	-	-0.2
Sopen01g018870	-	-	-	-	-	2.58
Sopen01g020370	-	-	-	-	-	2.58
Sopen01g025100	-0.44	-0.28	0.17	0.23	0.34	-0.2
Sopen01g025620	-	-	-	-	-	2.58
Sopen01g027610	-0.68	-0.03	0.09	0.38	0.47	-0.63
Sopen01g030930	-	-	-	-	-	2.58
Sopen01g033180	-	-	-	-	-	2.58
Sopen01g034090	-	-	-	-	-	2.58
Sopen01g037740	-	-	-	-	-	2.58
Sopen01g037740	-	-	-	-	-	-
Sopen01g037740	-	1.69	-	1.47	-	-
Sopen01g041510	-0.29	-0.82	0.19	0.17	0.52	-0.13
Sopen01g042460	-0.19	-0.38	0.01	0.2	0.32	-0.08
Sopen01g045070	-0.26	-0.23	0.03	0.08	0.37	-0.08
Sopen01g045440	-1.12	-0.65	0.36	0.06	0.72	-0.09
Sopen01g053300	-	-	-	-	-	2.58
Sopen01g053690	-0.34	-0.13	0.08	0.1	0.25	-0.02
Sopen02g001710	-	-	-	-	-	2.58
Sopen02g001830	-	-	-	-	-	2.58
Sopen02g001980	-	-	-	-	-	2.58
Sopen02g006230	-	-	-	-	-	2.58
Sopen02g007970	-	-	-	-	-	2.58
Sopen02g008070	-	-	-	-	-	2.58
Sopen02g010460	-	-	-	-	-	2.58
Sopen02g013090	-	-	-	-	-	2.58
Sopen02g014020	-0.3	-0.14	0.06	0.12	0.14	0.06
Sopen02g015460	-	1.23	-	1.37	-	0.1
Sopen02g017790	-	-	-	-	-	2.58
Sopen02g021250	-0.81	-0.23	0.1	0.28	0.67	-0.51
Sopen02g022140	-	-	-	-	-	2.58
Sopen02g023470	-0.37	-0.31	0.14	0.07	0.39	-0.06
Sopen02g023470	0.55	0.82	-0.02	-0.88	0.09	-2.48
Sopen02g029360	-0.21	-0.12	0.1	0.09	0.19	-0.08
Sopen02g035710	-	-	-	-	-	2.58
Sopen02g038120	-0.39	-0.37	0.3	0.01	0.23	0.07
Sopen02g038320	-	-	-	-	-	2.58
Sopen02g038760	-0.34	-0.2	0.1	0.12	0.24	-0.01
Sopen03g004980	-	-	-	-	-	2.58
Sopen03g008020	-	1.26	0.47	1.15	-	-
Sopen03g009150	-	1.54	-	1.62	-	-
Sopen03g010390	-	-	-	-	-	2.58
Sopen03g010390	-	-	-	-	-	-
Sopen03g010510	-	-	-	-	-	2.58
Sopen03g012260	-	-	-	-	-	2.58
Sopen03g013060	-0.36	-0.25	0.13	0.17	0.27	-0.06
Sopen03g013780	-	-	-	-	-	2.58
Sopen03g016170	-	-	-	-	-	2.58
Sopen03g016410	0.6	1.16	-	1.17	-	-
Sopen03g017410	-	-	-	-	-	2.58
Sopen03g021200	-0.23	-0.18	0.13	0.2	0.21	-0.21
Sopen03g022080	-	-	-	-	-	2.58
Sopen03g024560	-	-	-	-	-	2.58
Sopen03g024810	-	-	-	-	-	2.58
Sopen03g028340	-0.88	-0.26	-0.12	0.36	0.61	-0.16
Sopen03g032020	-0.35	-0.25	0.14	0.24	0.25	-0.14
Sopen03g033030	-0.93	-0.85	-0.1	0.47	0.76	-0.15
Sopen03g033200	-0.69	-0.22	0.19	0.22	0.29	-0.01
Sopen04g002510	-0.5	-0.7	0.16	0.19	0.52	-0.01
Sopen04g005440	-0.94	-1.16	0.28	0.32	0.8	-0.28
Sopen04g006470	-	-	-	-	-	2.58
Sopen04g006970	-	-	-	-	-	2.58
Sopen04g008710	-	-	-	-	-	2.58
Sopen04g009850	-	-	-	-	-	2.58
Sopen04g011060	-	-	-	-	-	2.58
Sopen04g013430	-	-	-	-	-	2.58
Sopen04g014510	-	-	-	-	-	2.58
Sopen04g014960	-0.67	-0.27	-0.02	0.24	0.46	-0.0
Sopen04g020060	-	-	-	-	-	2.58
Sopen04g020160	-	-	-	-	-	2.58
Sopen04g020270	-	-	-	-	-	2.58
Sopen04g021770	-	-	-	-	-	2.58
Sopen04g022080	-	-	-	-	-	2.58
Sopen04g023120	-	-	-	-	-	2.58
Sopen04g023620	-	-	-	-	-	-
Sopen04g023620	-	-	-	-	-	2.58
Sopen04g024200	-	-	-	-	-	2.58
Sopen04g024810	-	-	-	-	-	2.58
Sopen04g025770	-	-	-	-	-	2.58
Sopen04g028810	0.63	1.09	-	1.22	-	-
Sopen04g035370	-0.38	-0.04	0.11	0.14	0.36	-0.33
Sopen04g036200	-0.28	-0.19	0.07	0.12	0.33	-0.16
Sopen05g005040	-0.25	-0.26	0.02	0.17	0.35	-0.14
Sopen05g005410	-0.27	-0.14	0.14	0.09	0.24	-0.12
Sopen05g006070	-0.26	-0.46	0.09	0.21	0.36	-0.1
Sopen05g007980	-0.43	-0.51	0.2	0.17	0.34	0.03
Sopen05g008280	-0.93	-0.53	0.37	0.14	0.64	-0.28
Sopen05g009800	-	-	-	-	-	2.58
Sopen05g009800	-	-	-	-	-	2.58
Sopen05g010240	-	-	-	-	-	2.58
Sopen05g012040	-	-	-	-	-	2.58
Sopen05g012450	-	-	-	-	-	2.58
Sopen05g013980	-	-	-	-	-	2.58
Sopen05g013990	-	-	-	-	-	2.58
Sopen05g015450	-	-	-	-	2.39	-0.42
Sopen05g015450	-	-	-	-	-	2.58
Sopen05g016230	-	-	-	-	-	2.58
Sopen05g017020	-	-	-	-	-	-
Sopen05g017020	-	-	-	-	-	2.58
Sopen05g019000	-	-	-	-	-	2.58
Sopen05g019070	-	-	-	-	-	2.58
Sopen05g021060	-	-	-	-	-	2.58
Sopen05g022330	-	-	-	-	-	2.58
Sopen05g024280	-	1.52	-	1.65	-	-
Sopen05g024290	-	-	-	-	-	2.58
Sopen05g024370	0.63	1.09	-	1.22	-	-
Sopen05g024550	-	1.52	-	1.65	-	-
Sopen05g025190	-	-	-	-	-	2.58
Sopen05g025450	-	-	-	-	-	-
Sopen05g025450	-	-	-	-	-	2.58
Sopen05g026130	-	-	-	-	-	2.58
Sopen05g026130	-	-	-	-	-	-
Sopen05g027190	-	-	-	-	-	2.58
Sopen05g028360	-	-	-	-	-	2.58
Sopen05g031850	-	-	-	-	-	2.58
Sopen05g031980	-0.83	-0.36	0.13	0.14	0.5	0.07
Sopen05g032150	-0.35	-0.63	0.12	0.29	0.38	-0.07
Sopen05g033110	-0.29	-0.51	0.06	0.27	0.49	-0.28
Sopen06g001190	-0.5	-0.33	0.21	0.3	0.45	-0.44
Sopen06g002550	-	1.52	-	1.65	-	-
Sopen06g005190	-	-	-	-	-	2.58
Sopen06g006940	-	-	-	-	-	2.58
Sopen06g010920	-	-	-	-	-	2.58
Sopen06g010920	-	-	-	2.58	-	-
Sopen06g017140	-	-	-	-	-	2.58
Sopen06g019470	-	-	-	-	-	2.58
Sopen06g019470	-	-	-	-	-	-
Sopen06g023390	-0.28	-0.16	0.1	0.09	0.18	0.01
Sopen06g024260	-0.29	-0.25	0.12	0.14	0.27	-0.07
Sopen06g024680	-	-	-	-	-	2.58
Sopen06g025150	-	-	-	-	-	2.58
Sopen06g031100	-0.34	-0.41	0.24	0.23	0.42	-0.39
Sopen06g031270	-0.36	-0.17	0.07	0.22	0.23	-0.08
Sopen06g033420	-	-	-	-	-	2.58
Sopen06g034280	-0.41	-0.06	0.06	0.1	0.24	-0.01
Sopen07g001430	-	-	-	-	-	2.58
Sopen07g003930	-0.3	-0.4	0.12	0.12	0.4	-0.09
Sopen07g004810	-0.25	-0.2	0.13	0.13	0.23	-0.1
Sopen07g006750	-	1.53	-	1.14	-	-0.14
Sopen07g009770	-	-	-	-	-	2.58
Sopen07g011290	-	1.37	-	1.77	-	-
Sopen07g011530	-	-	-	-	-	2.58
Sopen07g017130	-0.28	-0.09	0.09	0.09	0.31	-0.2
Sopen07g018940	-	-	-	-	-	2.58
Sopen07g022870	-0.61	-1.26	0.27	0.4	0.66	-0.27
Sopen07g023720	-0.51	-0.41	0.19	0.34	0.42	-0.3
Sopen07g023820	-0.37	-0.12	0.05	0.14	0.19	0.03
Sopen07g024220	-0.28	-0.12	0.02	0.07	0.29	-0.05
Sopen07g028930	-	-	-	-	-	2.58
Sopen07g032460	-0.49	-0.46	0.11	0.22	0.48	-0.11
Sopen07g032530	-	-	-	-	-	2.58
Sopen07g033050	-0.43	-0.23	-0.09	0.25	0.31	0.05
Sopen08g001860	-	-	-	-	-	2.58
Sopen08g003760	-	-	-	-	-	2.58
Sopen08g004800	-0.41	-0.56	0.17	0.31	0.43	-0.22
Sopen08g006110	-	-	-	-	-	2.58
Sopen08g011730	-	-	-	-	-	2.58
Sopen08g012510	-	1.36	-	1.78	-	-
Sopen08g012530	-	-	-	-	-	-
Sopen08g012530	-	-	-	-	-	2.58
Sopen08g012640	-0.46	-0.22	0.03	0.25	0.27	-0.0
Sopen08g016540	-	-	-	-	-	2.58
Sopen08g016930	-	-	-	-	-	2.58
Sopen08g019810	-0.52	-0.21	0.26	0.17	0.25	-0.11
Sopen08g019900	-	-	-	-	-	2.58
Sopen08g021150	-0.47	-0.32	0.19	0.35	0.41	-0.47
Sopen08g029320	-0.3	-0.18	0.15	0.03	0.24	-0.02
Sopen08g029660	-0.14	-0.08	-0.06	0.06	0.22	-0.04
Sopen09g006700	-0.26	-0.59	0.17	0.13	0.41	-0.07
Sopen09g006770	-	1.52	-	1.65	-	-
Sopen09g007410	-1.16	1.34	-	1.6	-	-
Sopen09g007630	-0.56	-0.43	0.04	0.09	0.66	-0.14
Sopen09g008800	-	-	-	-	-	2.58
Sopen09g009680	-	-	-	-	-	2.58
Sopen09g009760	-	-	-	-	-	2.58
Sopen09g010700	-	-	-	-	-	2.58
Sopen09g012580	-	-	-	-	-	2.58
Sopen09g016510	-	-	-	-	-	2.58
Sopen09g019230	-0.46	-0.68	-0.0	0.38	0.57	-0.21
Sopen09g020200	-	-	-	-	-	2.58
Sopen09g021400	-	-	-	-	-	2.58
Sopen09g029450	-	-	-	-	-	2.58
Sopen09g030010	-0.25	-0.22	0.05	0.27	0.24	-0.19
Sopen09g032940	-0.38	-0.35	0.18	0.33	0.44	-0.52
Sopen09g033450	-0.24	-0.15	0.12	0.09	0.26	-0.15
Sopen09g034550	-	1.52	-	1.65	-	-
Sopen09g035710	-	-	-	-	-	2.58
Sopen09g036240	-0.36	-0.21	0.08	0.07	0.35	-0.04
Sopen09g036300	-	-	-	-	-	2.58
Sopen10g003750	-0.28	-0.19	0.11	0.18	0.29	-0.22
Sopen10g006820	-	-	-	-	-	2.58
Sopen10g010780	-0.43	-0.05	0.15	1.16	-	-0.08
Sopen10g015130	-	-	-	-	-	2.58
Sopen10g015700	-	-	-	-	-	2.58
Sopen10g016060	-	-	-	-	-	2.58
Sopen10g020850	-	-	-	-	-	2.58
Sopen10g024900	-	-	-	-	-	2.58
Sopen10g025150	-	-	-	-	-	2.58
Sopen10g025700	-	-	-	-	-	2.58
Sopen10g029140	-0.24	-0.21	-0.0	0.1	0.36	-0.09
Sopen10g031640	-0.43	-0.25	0.17	0.03	0.38	-0.04
Sopen11g003720	-0.86	-0.66	0.08	0.38	0.74	-0.36
Sopen11g010170	-	-	-	-	-	2.58
Sopen11g010170	-	-	-	-	-	-
Sopen11g015810	-	-	-	-	-	2.58
Sopen11g017340	-0.49	-0.49	0.24	0.27	0.36	-0.14
Sopen11g018160	-	1.55	-	1.62	-	-
Sopen11g021120	-	-	-	-	-	2.58
Sopen11g025120	-	-	-	-	-	2.58
Sopen11g025870	-0.06	-0.12	0.05	0.07	0.08	-0.03
Sopen12g001070	-0.96	-0.06	-0.01	0.29	0.6	-0.33
Sopen12g002350	-	1.52	-	1.65	-	-
Sopen12g004070	-0.42	-0.19	0.03	0.17	0.28	0.01
Sopen12g004090	-0.33	-0.17	0.07	0.18	0.29	-0.13
Sopen12g004090	-	-	-	-	-	2.58
Sopen12g004920	-0.2	-0.24	0.08	-0.02	0.29	0.03
Sopen12g005880	-0.33	-0.36	-0.03	0.15	0.46	-0.06
Sopen12g006280	-	-	-	-	-	2.58
Sopen12g010510	-1.0	-0.69	0.26	0.53	0.56	-0.39
Sopen12g011130	-	-	-	-	-	2.58
Sopen12g011350	-	-	-	-	-	2.58
Sopen12g013000	-	-	-	-	-	2.58
Sopen12g016890	-	-	-	-	-	2.58
Sopen12g019060	-	-	-	-	-	2.58
Sopen12g021680	-	-	-	-	-	2.58
Sopen12g022290	-	-	-	-	-	2.58
Sopen12g022840	-	-	-	-	-	2.58
Sopen12g022890	-0.21	-0.23	0.06	0.11	0.27	-0.06
Sopen12g024880	-	-	-	-	-	2.58
Sopen12g025240	-	-	-	-	-	2.58
Sopen12g027620	-	-	-	-	-	2.58
Sopen12g031950	-0.37	-0.26	0.15	0.2	0.32	-0.17
Sopen12g033330	-	-	-	-	-	2.58
Sopen12g034580	-0.6	-0.53	0.13	0.02	0.61	0.01

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.