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Heatmap: Cluster_139 (HCCA clusters)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
4 h after light
8 h after light
12 h after light
4 h after dark
8 h after dark
12 h after dark
1.86 - -0.92 -0.98 -1.08 -0.21
1.99 - - -0.6 - 0.46
1.57 -0.99 -1.15 -1.13 -0.22 -0.38
1.16 0.87 -1.7 -3.87 -3.16 0.53
1.05 - 0.1 - 0.01 0.89
- - - - - -
1.23 0.05 -0.84 -1.25 -0.9 0.13
0.54 -0.13 -0.62 0.07 -0.26 0.13
0.88 0.07 -0.59 -1.17 -0.55 0.4
1.89 - -0.64 - - 0.72
- 2.58 - - - -
1.09 -0.73 -0.66 -0.21 -0.14 -0.22
1.6 -0.32 - - - 1.11
0.91 - - - 0.54 1.42
0.29 -0.06 -0.21 0.12 -0.21 0.0
1.49 -1.17 -0.95 - -1.21 0.85
1.96 -1.04 -5.17 -5.68 -2.24 0.46
1.16 -0.1 -0.38 -0.35 -0.88 -0.44
0.81 -0.34 -0.46 -0.74 -0.15 0.29
1.34 -0.38 -1.16 -0.7 -0.6 -0.03
1.87 - - - 0.01 0.41
0.84 - - - 0.47 1.5
1.6 0.1 -0.62 -5.63 -1.91 -0.07
0.42 -0.13 -0.41 0.16 -0.37 0.14
0.36 -0.47 -0.52 -0.07 -1.08 0.9
0.7 0.15 -0.74 -0.7 -0.57 0.47
1.83 0.55 - - - -0.03
0.81 -0.17 -1.14 -0.26 -0.45 0.42
1.91 - - - - 1.17
0.86 0.0 -0.86 -0.3 -0.52 0.16
1.35 -0.07 - - 0.28 0.36
- 0.59 -2.36 -1.08 -0.0 1.5
1.52 -2.24 -1.4 -1.82 0.01 0.32
1.39 -1.7 -1.01 -2.82 0.07 0.47
1.48 -0.03 -1.17 -1.72 -1.41 0.16
1.41 - - - 0.27 1.09
1.32 - - - 0.3 1.19
0.24 -0.0 -0.45 -0.25 -1.82 0.97
0.31 -0.21 -0.22 0.11 -0.14 0.08
1.55 0.2 -1.68 -2.83 -2.51 0.38
1.73 - -2.22 0.31 - 0.3
1.34 -0.63 -1.58 -1.52 -1.21 0.76
0.28 0.03 -0.3 0.09 -0.26 0.08
- 2.58 - - - -
1.57 -0.13 - - -0.17 0.29
1.96 - - -0.55 -0.72 -0.27
0.71 0.18 -0.9 -0.23 -0.18 -0.07
0.45 -0.16 -0.38 0.02 -0.31 0.21
1.4 -0.95 -1.13 -0.15 -1.18 0.06
2.16 - - - - 0.61
1.37 - -0.37 - -1.05 1.11
1.39 -0.52 -1.55 -0.54 -0.45 -0.12
0.66 0.3 -0.75 -0.41 -0.2 -0.03
0.63 0.32 -0.73 -0.28 -0.62 0.17
0.47 -0.02 -0.44 -0.06 -0.15 0.04
1.82 -0.19 -1.44 -1.99 -2.48 -0.36
0.41 -0.42 -0.14 0.08 -0.27 0.17
0.97 -0.13 -0.89 -0.3 -0.56 0.13
1.56 - - - 0.09 0.99
0.54 -0.08 -0.16 0.13 -0.63 -0.05
1.79 -1.18 -2.42 -3.67 -2.37 0.72
0.9 -0.31 -1.14 0.21 -0.78 0.2
0.91 -0.26 -0.65 -0.44 -0.02 -0.11
1.88 - - - -0.04 0.42
1.81 -0.61 - - - 0.89
1.37 -0.77 -1.66 -1.06 -0.22 0.23

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.