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Heatmap: Cluster_1 (HCCA clusters)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
4 h after light
8 h after light
12 h after light
4 h after dark
8 h after dark
12 h after dark
-0.01 0.44 - - - 1.87
- - - - 2.03 0.93
0.24 - 0.13 -0.73 - 1.64
- - 1.39 - - 1.76
0.1 0.55 0.6 - - 0.97
- 0.53 - 1.53 - 0.73
- 1.67 - - - 1.5
- 1.91 - 0.67 - -0.61
- - - - - -
- 0.63 0.0 1.59 - -1.19
0.18 1.08 - 1.1 - -0.71
- 0.34 0.8 - - 1.58
- 1.61 - 1.06 - -0.21
-6.39 1.51 - - -2.5 1.57
0.02 0.16 -0.22 0.36 -0.17 -0.26
- - - - 2.03 0.93
- - - - - -
- - - - 2.03 0.93
0.82 - - - 1.65 0.13
- 0.69 - 1.47 - 0.7
0.31 0.62 - - - 1.69
- 1.02 - 1.99 - -
1.08 - - - - 1.96
- - - - 2.03 0.93
-0.79 -0.34 0.71 -0.2 - 1.08
- - - - 2.03 0.93
-0.01 -0.42 - - - 2.09
- 0.93 -0.15 - - 1.68
1.08 - - - 1.53 0.01
- 1.18 0.55 1.18 - -
- 0.49 0.54 - - 1.65
0.11 -0.22 0.83 - - 1.2
2.45 - - -0.88 - -
0.32 1.5 - 0.94 - -
- - - - 2.03 0.93
-0.08 0.75 0.42 - - 1.02
0.97 - - - 1.5 0.28
-1.94 0.28 - 1.74 - 0.24
-0.06 -0.16 0.25 0.12 -0.01 -0.18
0.65 0.1 - - - 1.75
-0.65 0.03 0.68 -0.3 -0.43 0.25
-0.07 0.27 - 1.68 - -0.66
- 1.18 0.02 - - 1.45
1.08 - - - - 1.96
0.08 -1.22 0.7 1.02 -0.8 -1.84
- 2.24 - 0.35 - -
- 0.35 0.4 - - 1.77
1.08 - - - - 1.96
- - 1.68 - - 1.48
- - 1.03 - - 1.99
- 0.3 -0.31 1.7 - -0.51
- 0.71 - - - 2.13
0.63 0.33 -1.25 -1.29 -0.46 0.71
-0.44 0.64 - 0.97 - 0.8
- 1.25 - 0.71 - 0.99
1.01 - - - - 2.0
- 1.38 - 0.62 - 0.9
0.82 - - - 1.65 0.13
1.08 - - - - 1.96
- - - - 2.08 0.82
- 1.71 - - - 1.45
- - 1.39 - - 1.76
- 0.83 - 1.16 - 0.99
- - - - 2.03 0.93
- - - - 2.03 0.93
- 1.36 - - - 1.78
- 0.39 - - - 2.23
- 1.27 - - - 1.85
- 1.22 - 1.74 - -1.63
- - - - 2.03 0.93
- 0.27 - - - 2.26
- 0.93 - - - 2.03
- - 1.05 - - 1.97
1.08 - - - - 1.96
0.32 0.77 - - - 1.61
0.04 0.49 0.44 - - 1.15
- - - - 2.03 0.93
- 0.5 -0.11 -0.2 - 1.48
- - - - - -
- 1.83 - 1.29 - -
- - - - - 2.58
- - - - 2.03 0.94
- 1.42 - 1.73 - -
- - 1.02 - 1.99 -
- - 1.39 - - 1.76
2.35 - - -0.17 - -
0.92 - 0.35 - - 1.5
- - - - 2.01 0.98
- 1.01 - - - 1.99
- - - - 2.03 0.93
- - - - 2.03 0.93
-0.04 - - - - 2.33
0.5 - - - - 2.2
- 2.12 - 0.74 - -
- - - - 2.03 0.93
- 1.17 - - - 1.91
-2.11 1.14 - 1.02 - 0.62
0.32 -2.18 0.04 -2.3 1.48 -1.0
-13.61 -15.38 1.39 -16.39 -11.68 1.76
-0.33 0.79 0.75 0.84 - -
- 1.55 - - - 1.62
- 1.71 - - - 1.45
0.14 0.59 - - - 1.76
- 2.24 - 0.35 - -
0.09 0.71 - -1.48 -0.98 1.29
1.08 - - - - 1.96
- 0.99 0.36 1.45 - -
- 1.18 - 1.63 - -0.64
- - - - 2.11 0.74
- 1.99 - 1.02 - -
0.22 - - -1.32 - 2.15
-0.75 0.38 -0.25 - - 1.71
- 1.36 0.74 0.82 - -
0.18 1.31 - 0.76 - -0.51
- 2.24 - 0.35 - -
- - 1.19 - - 1.89
- 2.24 - 0.35 - -
- 1.47 - 1.04 - 0.24
- 2.24 - 0.35 - -
- 1.36 -12.48 1.78 - -
-0.81 -0.16 0.38 -0.67 -1.98 1.24
- 0.02 - - - 2.32
1.08 - - - - 1.96
- 1.07 - - - 1.96
0.28 - 0.29 -16.15 - 1.83
-0.76 -0.64 0.82 0.58 0.28 -1.73
-0.96 0.6 -9.31 1.31 -0.32 -0.53
0.06 0.19 0.56 1.23 - -
-0.19 0.94 - - - 1.68
- - 1.39 - - 1.76
- - 1.39 - - 1.76
- 1.05 - 1.58 - -0.09
- - - - 1.99 1.02
- -0.14 - -2.6 0.01 1.97
1.16 - - - - 1.91
- 1.71 - - - 1.45
0.39 0.98 -0.77 0.73 - -1.07
2.26 - - 0.26 - -
0.51 0.06 -0.15 -0.04 -0.29 -0.25
- 0.65 0.7 - - 1.49
- - - - 2.03 0.93
- - - - - -
- 1.83 - 1.29 - -
1.08 - - - - 1.96
- - - - 1.88 1.21
- 1.1 - - - 1.95
- - - - 2.03 0.93
2.2 -24.04 - 0.5 - -
- - - - 1.85 1.26
- - 1.39 - - 1.76
- 0.91 0.59 - - 1.39
- - - - 2.1 0.76
1.08 - - - - 1.96
- 1.42 - - - 1.73
- 2.24 - 0.35 - -
- 1.58 - - - 1.59
-1.0 1.13 0.59 0.58 - -1.69
- - - - 2.03 0.93
-1.78 0.34 -0.28 1.54 - -0.49
-0.56 -0.2 -0.51 0.45 0.35 0.15
-0.47 -0.22 0.13 0.59 0.1 -0.43
- - - - 2.04 0.91
- - -1.7 - 2.28 -0.24
- - - - 2.03 0.93
1.22 0.68 - 1.04 - -
- 0.97 - 2.01 - -
1.08 - - - - 1.96
- 0.71 - - - 2.13
- 1.86 - 1.24 - -
- 1.36 - - - 1.78
- 0.89 - 0.86 - 1.22
-0.08 0.27 - 1.31 -0.03 -1.33
0.19 1.3 - 0.76 - -0.51
0.08 -0.58 -0.39 0.08 0.23 0.36
- 1.34 -5.31 1.38 -3.81 -0.4
- - - -3.35 2.16 0.53
0.3 - 0.8 - - 1.6
- 1.71 - - - 1.45
- - - - 2.05 0.9
- - - - 2.03 0.93
- 2.08 - 0.83 - -
- 2.24 - 0.35 - -
- 1.36 - - - 1.78
0.5 - 1.0 - - 1.37
- - - - 2.03 0.93

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.