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Heatmap: Cluster_60 (HCCA clusters)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
1 h after light
3 h after light
5 h after light
7 h after light
9 h after light
11 h after light
1 h after dark
3 h after dark
5 h after dark
7 h after dark
9 h after dark
11 h after dark
- - 1.69 - 0.33 - 1.11 1.28 - 1.56 - -
-0.31 -1.29 -2.15 - -0.04 -2.58 0.31 -0.86 -0.73 1.56 0.84 1.19
- - - - - - - - - 3.1 - 1.78
- - - - - - - - - 3.1 - 1.78
- - - - - -0.16 0.32 -1.36 1.11 0.51 1.11 1.9
- -1.05 - -0.24 - 1.09 - -0.44 - 1.91 0.92 1.1
- 1.0 - - - - 1.47 0.97 - 1.79 - 0.86
- - - - - - - - - 2.86 - 2.25
- - -0.33 0.42 -1.68 0.31 -0.07 0.42 -0.73 1.31 0.77 0.32
- 0.01 - - - 1.15 -0.81 0.66 0.11 1.15 0.11 1.16
- -0.67 0.01 -0.07 -0.46 0.3 1.12 -0.31 -0.45 0.57 0.12 0.22
- - - - - - 3.19 1.52 - - - -
- - 0.42 - - 1.43 0.21 0.38 - 1.66 0.39 0.05
- 1.16 - - - - 1.09 0.67 - 1.54 0.99 0.21
- 1.21 1.2 - - - - -0.61 0.79 2.06 - -0.26
- - - - - - 0.79 1.16 0.27 1.56 0.57 1.26
-0.84 -0.34 0.34 0.28 0.12 -0.08 0.15 -0.51 0.38 0.01 -0.32 0.27
- - - - 0.29 - 2.35 0.04 - 1.8 - 0.2
- -1.45 - - -0.59 - 0.73 0.5 -0.35 1.81 1.15 0.46
- - - 0.8 - - - 1.56 - 2.37 1.1 -
- -0.36 - -1.14 0.07 0.19 -0.35 0.64 0.7 1.07 -0.12 0.67
- - - - - 1.95 1.0 0.91 0.79 0.69 - -0.13
- 0.08 -0.37 - -0.35 1.44 0.1 -0.8 - 1.31 -0.4 0.85
- - - -0.75 - 1.59 -1.37 1.72 0.42 1.76 - -
- - - - 0.5 -0.53 1.82 0.95 0.73 0.13 0.73 -
- - - - - 0.75 - 1.56 1.02 2.42 - -
- 0.22 - - - 0.92 1.14 0.82 - 1.59 - 0.98
- - - - - - 2.44 1.98 - 1.4 - -
- - - - - - - - - 3.58 - -
- - - - 0.1 - 1.55 1.86 0.92 1.32 - -
- - - - -0.65 -0.68 1.54 0.89 - 1.6 0.52 0.59
- - - - - - - 1.75 1.44 1.84 - 1.23
- 0.95 - - 1.91 0.1 -0.68 -1.91 -0.63 0.77 - 1.01
- 1.5 - 0.31 - - 1.1 -0.99 - 0.87 0.6 0.95
- 1.14 - - 1.29 1.85 - - - - - 1.91
- - - - - - 1.4 1.73 - 2.59 - -
- - - - - - 2.05 0.95 - 1.82 1.27 -
- - - - - - - 2.65 - 2.52 - -
- - - - - - 2.34 - - 2.79 - -
- - - - - - - - - 3.58 - -
- - - - - - - - - 3.58 - -
- -0.84 1.66 - - 1.29 -0.66 -1.34 1.13 1.03 - -0.79
- - - - -0.71 -0.16 1.98 1.33 0.11 0.51 -0.04 -0.82
- 0.5 - - - - - 0.0 - 1.87 1.6 1.54
- - - - - - - 1.34 1.22 1.62 - 2.02
- - - - - - - - - 2.49 1.22 2.03
- - -0.51 -0.43 -1.15 1.58 -1.84 -0.11 1.82 - -1.19 0.97
- - - - - - 2.88 2.21 - - - -
- -0.98 - - 0.66 -1.28 1.2 0.57 0.57 0.16 1.28 -0.53
- - - - - - 0.91 0.42 - 2.1 - 2.17
-0.85 0.17 -0.94 -0.36 0.14 0.68 0.13 -0.24 -0.1 -0.07 0.14 0.47
- - - - - - 0.04 1.84 0.96 1.23 - 1.63
- - - - 1.7 - 2.73 1.06 - - - -
0.48 -0.06 -2.36 0.06 -0.41 0.63 0.27 -0.42 0.12 -0.35 -0.9 0.81
- - - - - - 3.58 - - - - -
0.11 -1.33 -0.6 0.07 -0.61 -0.33 -0.05 -0.5 0.04 0.68 0.25 0.91
- - - 0.16 0.22 0.06 1.96 0.91 0.33 0.73 - -
- -0.59 - - - 1.54 1.59 1.5 0.5 - 0.23 -
-0.17 -3.15 -2.02 -0.45 -1.14 0.57 -0.31 0.22 1.35 0.49 0.26 -0.05
- - -1.25 -0.58 1.21 -0.25 0.38 0.06 0.21 0.57 1.17 -0.94
- - - - 1.46 - 1.49 - - 2.68 - -
-0.38 -3.36 -0.25 -0.43 -0.34 0.69 0.84 0.15 -0.74 0.85 0.1 -0.36
- - - - 1.7 - 0.74 1.71 - 1.93 - -
- - - 1.35 1.09 - 0.47 - 0.51 1.91 - -0.41
- 0.76 - - 0.91 - - 0.26 - 2.13 - 1.52
- - - - - - - 1.76 - 2.62 - 1.3
- 0.94 - - - - 1.28 -1.14 - 2.17 0.46 0.41
- - - 1.05 - 1.84 -0.57 0.34 1.22 0.12 - 0.01
- - - - 2.0 - 1.87 - - 1.64 - 0.31
- 0.8 - 0.02 - - 0.14 - - 2.17 1.04 0.67
- - - - - - 1.33 - - 2.52 - 1.91
- - - - - - 1.33 - - 2.52 - 1.91
- - - - - - - - - 2.37 - 2.77
-0.5 -0.38 -0.16 -0.26 -0.37 0.47 0.46 0.01 0.18 0.07 0.1 0.01
- -2.37 - 0.95 -0.36 0.76 0.98 -0.51 0.95 1.18 -1.55 -2.33
-1.02 -0.82 -0.6 0.05 0.31 0.27 -0.07 0.01 0.35 0.21 0.46 0.06
- - - - 2.17 - 2.2 1.53 - - - -
- - - - - - - - - 3.58 - -
- - 0.64 - - 1.28 0.74 0.29 - 1.59 -0.04 0.19
- - 0.97 - 0.61 1.6 0.38 -1.03 - 0.33 1.29 -
- -2.54 - 0.15 -2.4 0.84 0.75 0.51 1.08 0.47 -0.14 0.3
- - - - - - - 1.52 - 3.19 - -
- - 1.01 1.09 1.05 - 1.8 0.01 - 0.37 - -
- - 1.06 - - - 1.69 -0.57 - 1.29 - 1.84
- - - - - - 0.55 - 1.34 2.74 - 0.42
- - - - 0.88 1.44 1.66 - - 2.1 - -
- -0.23 1.27 1.35 - 1.9 - - - 0.64 - -0.18
- - - - - - - 0.77 - 2.64 - 2.03

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.