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Heatmap: Cluster_39 (HCCA clusters)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
1 h after light
3 h after light
5 h after light
7 h after light
9 h after light
11 h after light
1 h after dark
3 h after dark
5 h after dark
7 h after dark
9 h after dark
11 h after dark
- - 1.81 - - - - 0.28 - 0.54 1.5 1.59
- -0.88 1.25 - - 1.41 0.72 -1.37 - 0.49 - 1.57
-0.71 -0.89 1.15 -0.45 0.08 0.92 0.56 -1.25 -1.48 -1.79 0.55 -0.08
0.22 0.0 1.22 0.58 1.02 0.31 -0.99 -2.8 -2.56 -0.94 -0.35 -0.69
- - 3.18 - - - - 1.55 - - - -
- - 1.96 - - - 1.01 0.33 - - - 2.28
- - 1.82 - - - - 1.19 - - 1.51 1.74
- - - - - 0.76 1.57 0.15 1.1 - - 2.03
- - 1.21 - - 0.78 1.26 0.59 - - 0.91 1.13
- - 2.12 1.57 - - 0.16 -0.32 - - 0.81 0.03
- 0.54 2.68 - - - - 0.05 1.64 - - -
- 0.39 1.41 1.52 -0.98 0.01 0.06 -2.62 -0.15 -0.26 - -0.49
-0.91 -0.77 0.93 -0.19 0.41 0.44 0.38 -0.75 -0.04 -1.44 -0.57 0.58
- - 2.76 - - - - - - - - 2.39
-0.05 -0.02 -0.01 -0.05 -0.17 -0.1 0.12 0.03 -0.14 0.09 0.15 0.1
- -0.7 0.43 - 0.45 - 1.06 1.9 - 0.67 - 0.34
- - 1.85 - 1.15 -0.3 - 0.86 - 0.87 -0.18 -0.24
- - 1.61 - - - 2.08 - - - - 2.24
- - 2.76 - - - - - - - - 2.39
- - - - 0.11 0.66 2.14 -0.53 - 1.33 0.78 -
- 0.3 1.08 0.22 0.17 0.56 -1.48 -1.03 0.12 -0.65 0.69 -0.5
- - 2.12 - 1.14 - 1.17 1.68 - - - -
- 0.02 -0.66 -0.8 0.97 -0.79 -0.46 -0.44 1.1 -0.24 0.8 0.07
- - 1.37 - 1.09 - - - - - 1.06 2.38
-0.71 -0.81 -0.26 -0.24 -0.21 0.49 0.66 0.01 -0.04 -0.52 -0.03 0.71
- 1.48 2.61 - 1.63 - - - - - - -
- - 0.65 1.11 -0.33 - 0.44 1.03 - 0.89 - 1.15
- 0.27 0.41 0.08 - -0.02 0.45 1.46 - - - 1.72
- - 1.09 -0.24 0.5 -0.34 - 0.24 -0.07 1.33 -0.22 0.41
- -0.24 - 0.56 0.31 - 0.53 0.95 - 0.13 0.73 1.21
- -0.4 0.74 0.19 -0.25 -0.69 -0.47 - 0.57 -0.53 -0.57 1.76
- 1.15 2.02 0.82 -0.24 -0.32 -0.31 -1.39 - -1.74 -0.64 -2.56
- -1.13 2.59 0.46 0.42 1.01 - - - - - -0.36
- - 2.34 - - - - - 2.18 - - 1.26
- - 0.48 - - 0.05 1.52 1.71 - 0.71 0.17 -0.61
- - 1.27 - 1.0 - - -0.35 1.11 - 1.24 1.19
- - 2.66 - - - - - 2.5 - - -
- -0.13 0.77 -0.49 - -0.38 0.22 0.29 -0.04 0.73 0.33 0.7
1.02 -1.96 -0.83 - - 0.33 1.16 -0.05 - -0.59 - 2.01
- - 1.3 - - 1.87 - -0.13 - 2.31 - -
- - 3.13 - - - - 1.69 - - - -
- - 1.9 - 0.91 - 0.94 0.46 - 1.63 - -
-0.56 0.24 0.0 0.17 0.42 -0.08 0.77 -0.24 -0.47 -0.34 0.02 -0.62
- 1.06 1.68 - - 0.25 - 0.24 1.51 - - 0.59
- - 0.46 - - - 0.25 -0.07 - 1.47 1.74 1.24
- 1.16 0.71 1.38 - - 1.34 1.59 - - - -
- - 1.8 - - - - - - 1.54 2.49 -
1.75 -1.23 -0.1 -0.42 - 1.06 - - - 1.14 -0.13 0.4
- 0.5 0.89 -0.23 -0.1 -0.91 -0.75 -1.74 0.09 -0.79 0.04 1.51
- - 2.27 - - - - 2.29 - - - 1.18
- - 0.89 -0.44 - - -1.06 1.15 1.76 0.9 -0.42 -0.48
- - 0.9 0.57 -0.08 - - 0.27 0.74 0.64 0.59 0.82
- 1.69 - - - 0.88 1.1 -0.12 - - - 1.95
- - 2.83 - - - - 2.3 - - - -
- 1.14 - - 1.0 - - -0.16 2.18 - 1.24 -
- - 2.34 - - - - - 2.18 - - 1.26
- 0.21 1.93 1.8 - - -0.61 -0.19 - 0.08 - -0.03
- - 2.71 - - - - - - 2.45 - -
- -0.91 1.33 -0.32 -0.05 0.23 - 0.22 - 1.51 - 1.01
- - 2.52 - - - - 0.89 - - - 2.15
- - 2.99 - 2.01 - - - - - - -
- -1.09 0.04 1.16 - -0.38 -0.17 - 1.51 - 0.01 1.46
- 0.65 2.24 1.09 1.25 - -1.11 - - - -0.47 -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.