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Heatmap: Cluster_1 (HCCA clusters)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
1 h after light
3 h after light
5 h after light
7 h after light
9 h after light
11 h after light
1 h after dark
3 h after dark
5 h after dark
7 h after dark
9 h after dark
11 h after dark
0.84 -1.14 -0.64 - -1.99 - -0.38 0.98 - 0.5 0.76 1.59
-0.46 -0.34 -1.82 -0.12 -0.74 -1.79 -1.01 -0.15 -0.59 0.31 0.62 1.83
0.35 -0.53 -0.8 -0.96 -0.92 -0.58 -0.35 -0.32 -0.24 -0.06 0.78 1.39
-0.45 0.78 -0.12 -1.19 -1.7 -1.76 -1.3 -1.63 -1.45 -0.78 0.54 2.16
- -0.58 -0.05 -1.31 0.9 - -0.21 0.79 -0.26 0.41 -2.07 1.64
- - -0.97 - - -1.4 0.3 -0.5 1.24 0.7 1.54 1.2
1.12 -0.98 -0.76 -0.75 -1.26 -1.34 -1.69 -2.12 -1.25 -0.57 0.87 1.95
- 0.45 - -1.69 0.64 -1.79 -2.32 -1.28 -1.4 0.15 0.82 2.2
2.34 - - - - - -0.46 0.58 - - 1.19 1.28
0.9 -0.69 -1.26 -1.15 -1.6 -3.16 -3.03 -1.94 -0.59 0.2 1.54 1.63
-2.72 -1.76 -1.0 -1.25 -0.29 -0.46 0.07 -0.5 -0.62 -0.32 0.91 2.0
- -0.32 -2.31 -1.64 -1.43 -0.85 -2.26 -0.39 -0.05 0.57 0.97 2.13
- 0.73 - - -0.71 - - 0.36 0.24 0.01 0.97 2.11
- - - - - - 1.5 -0.4 - - 1.87 2.25
-0.92 -3.87 -2.03 -6.72 -6.61 -5.99 -2.08 -3.74 -4.87 -3.34 1.03 3.11
-0.23 0.41 -0.26 -0.12 -0.3 -1.12 -1.26 0.09 -0.24 -0.32 0.38 1.25
- - - - - - - 1.05 - - - 3.31
-3.87 -6.85 -4.13 -3.26 -4.99 - -3.73 -7.34 -5.88 - -0.23 3.43
-0.99 -0.74 -1.31 -1.89 -1.33 -1.74 -1.05 -0.06 0.57 0.52 0.96 1.68
- - - - - - - - - - 2.74 2.41
- - - 0.35 -1.3 - -0.27 0.77 -0.36 -0.58 1.23 2.0
- -0.36 - - -0.21 - - -0.86 0.73 0.51 0.74 2.34
1.97 - - - - - 0.18 1.22 -0.03 - 0.82 0.91
- -0.22 - -0.07 -0.67 0.46 -0.2 0.32 -1.35 -2.45 1.38 1.52
0.18 -0.72 -1.43 -0.58 -0.24 0.07 0.0 0.57 0.25 -0.07 0.36 0.5
- - - - - - - - - - - 3.58
- - - - - - - 0.9 - - 2.5 2.16
- - - - - - - 2.45 - - - 2.71
- 1.3 - - -0.88 -0.32 0.57 0.19 - 1.11 0.8 0.74
- - - - - - - - - - - 3.58
-1.29 -0.73 -0.41 -0.31 0.04 -0.33 -0.96 -0.77 -0.43 0.34 0.59 1.58
-0.26 -0.55 -0.78 -0.45 -0.64 -0.79 -2.63 -1.98 -0.03 0.67 0.8 1.69
- -0.78 -1.42 -2.75 -2.69 - -0.87 -0.83 0.67 0.88 0.45 2.27
-0.08 -0.77 -1.65 -3.27 -5.5 -5.25 -3.68 -2.43 -0.97 0.42 1.77 2.16
- - - - - - - 1.21 - - - 3.28
-1.13 -1.8 -1.41 -1.41 -2.18 -1.36 -1.24 -0.3 -0.25 0.09 1.1 2.2
- -2.25 - - -2.1 - 0.51 -0.03 1.12 -1.38 1.66 1.78
-1.16 -1.26 -0.77 -0.67 -0.21 -0.6 -0.07 0.02 -0.04 0.16 0.82 1.36
- - - - - - - - - - 2.22 2.88
- 1.03 - - - - - 1.53 - - 1.85 1.79
- - - - 2.25 - - - - - - 2.86
- 2.15 - - - - - - - - - 2.92
- -1.69 - - - - -3.04 - -1.87 0.57 1.62 2.75
- - - - - - -1.1 0.91 1.32 0.86 1.41 1.42
-4.7 -3.71 -2.02 -2.65 -2.62 -1.65 -0.7 -0.54 0.21 0.5 1.45 2.13
- - - -0.17 - - - 0.63 0.0 -0.1 1.63 2.18
0.48 -0.22 -0.99 -1.69 -1.63 -1.79 -0.9 -0.55 -1.53 -0.63 1.34 1.84
- - - - - - - - - - - 3.58
-0.19 -1.14 -0.22 -0.45 -0.4 -0.39 -0.25 -1.88 -1.72 -1.53 0.72 2.05
- -1.09 - -0.29 - -0.39 - -1.4 - 1.05 1.6 2.16
- - - - - - - - - - 2.04 2.98
- 0.74 - - - - - - - - 1.56 2.88
0.11 -0.07 -0.09 -0.23 -0.51 -0.45 -0.68 -0.98 -0.73 -0.13 0.55 1.39
- - - - - - -0.73 -0.31 0.19 0.46 1.5 2.39
0.05 -0.57 -0.79 -0.34 -0.43 -1.11 -0.77 -0.47 0.03 0.27 0.79 1.3
- - - - - - - - - - - 3.58
- - - - - - - - - - 3.07 1.86
- - - 1.23 - - - - - - - 3.27
- -1.82 - - -1.96 - - -0.66 0.6 -0.45 1.31 2.61
-0.27 -0.52 -0.57 -0.87 -0.58 -0.3 -0.78 -0.58 0.23 0.22 0.79 1.29
-0.43 0.09 -0.38 -0.24 -1.11 -2.66 -2.88 -0.76 -0.13 0.17 1.26 1.48
- - - - - - - - - - 2.62 2.55
- - - - 1.85 - - - - - 1.53 2.46
-4.11 -2.21 -1.53 -1.31 -1.25 -1.13 -1.04 -0.93 -1.39 -0.74 0.96 2.62
- - - - 1.17 - - 1.52 - - - 2.78
- - - - - - - - - - - 3.58
- - - - - - - - - - - 3.58
- - - - - - - 0.89 - - - 3.34
- - - - - - - - - - - 3.58
-0.81 0.11 -0.22 -0.43 -0.24 -0.64 -0.62 0.02 0.11 0.37 0.8 0.58
- -0.98 -0.17 -0.69 0.57 0.1 -1.32 0.11 -1.53 -0.13 1.22 1.24
1.37 -1.07 -1.98 -2.2 -1.96 -1.69 0.56 0.47 0.3 -0.68 0.63 0.72
- -2.13 - 0.12 -1.98 0.46 0.05 0.81 -1.03 - 1.33 1.71
-0.4 -2.79 -2.24 -1.13 -0.27 -1.44 -1.53 -0.77 0.14 0.77 0.88 1.87
- -0.9 -0.77 0.06 0.51 1.18 -0.98 -0.56 -1.93 -2.03 -0.93 1.97
0.66 - - - - - -2.14 -0.76 - 1.05 1.19 2.4
- - - - - - - 1.87 - - 2.09 2.03
- - - - - - 0.78 -0.45 - 2.0 - 2.47
- - - - - - 0.52 - 1.44 - 1.17 2.49
0.76 -0.95 -0.89 -1.28 -0.99 -0.76 -0.69 -2.44 -2.17 -1.79 0.56 2.31
1.96 - - -1.22 -1.87 -1.32 0.58 -0.11 0.58 -0.65 -0.92 0.95
- - - - - - - 0.9 - - 2.5 2.16
- -1.2 -0.17 -0.44 -0.5 - -1.09 -0.54 0.2 0.53 1.04 1.77
-0.08 -0.15 -0.27 -0.07 -0.15 -0.22 -0.47 0.04 0.13 0.24 0.4 0.33
- - - -1.3 - - - 0.3 0.54 0.04 0.87 2.6
- 0.39 0.65 -0.7 -0.54 -2.04 -1.44 -1.29 -1.1 -0.02 0.92 1.79
0.83 -3.15 - - - - -0.97 -1.5 -0.55 0.49 1.68 1.98
-4.47 -1.61 -0.67 -0.05 -0.36 -0.68 -0.06 0.13 -0.18 0.05 0.66 1.62
1.07 -2.37 -4.94 -5.27 -1.64 0.03 0.4 0.29 0.16 -0.53 0.74 1.19
- - - - - - - 1.8 - - 2.12 2.06
- 0.12 - -0.08 - - 0.04 1.37 - 1.26 1.09 0.88
1.21 - - - -1.62 - - 0.25 0.2 -0.9 2.07 1.2
- - - - - - - 2.04 - - - 2.98
- - - - 0.59 - 0.62 - - - 1.55 2.59
- - -0.41 - -1.88 -0.45 -2.56 0.42 -0.06 -1.87 0.3 2.65
- -0.78 - -0.05 -0.56 - -1.11 -0.11 -1.32 - 1.35 2.44
- - - - - - - 1.05 - 1.91 0.87 2.12
0.12 -0.11 -0.21 0.07 -0.57 -0.24 -0.99 -0.2 -0.17 0.28 0.61 0.62
- - - - 2.25 - - - - - - 2.86
0.02 -1.17 -0.38 -1.8 -2.13 -1.67 -0.65 -1.93 -1.35 -1.18 0.89 2.42
- - - - - - - - - - - 3.58
-1.77 -1.87 -1.28 -1.42 -1.71 -1.81 -0.91 -0.7 0.12 0.49 1.03 2.13
- - -2.92 -2.83 -3.56 -3.72 -0.65 -0.12 -0.19 0.32 1.47 2.36
2.09 0.11 - -1.09 -1.03 - -0.71 -1.39 -0.92 - 0.52 1.47
- - - - 0.59 - 0.62 1.95 - - - 2.35
- - - - - - - - - - - 3.58
-2.54 -3.69 -2.74 -4.03 -1.6 -0.37 0.63 0.11 -0.15 -0.07 1.16 1.89
-1.55 -0.62 -0.5 -0.74 0.01 -0.02 -0.46 -0.8 -0.36 0.12 0.86 1.45
- -0.82 -0.08 -0.02 -0.4 -1.71 0.51 -0.54 -1.31 1.1 0.1 1.43
1.94 -1.04 - - -0.89 - -0.11 0.18 - - 1.37 1.31
1.14 -1.61 -3.29 - -2.27 -2.13 0.35 0.15 0.59 -0.11 0.94 1.14
2.47 0.23 - -1.29 - - - -1.59 -0.99 - 1.37 0.54
-0.93 -1.25 -1.34 -1.3 -0.6 0.06 0.09 -0.38 -0.08 0.08 0.59 1.69
- -1.09 - - - - - 0.51 - - 1.95 2.64
-0.11 -1.1 -0.88 -1.35 -1.89 -2.3 -1.65 -3.34 -2.28 -0.86 1.23 2.5
-0.31 -0.14 -0.26 -0.35 -0.36 -0.23 -0.75 0.13 0.1 0.54 0.6 0.37
-0.46 -2.25 -2.27 -1.07 -0.89 -0.22 -0.76 -1.4 -0.76 -0.67 0.74 2.36
0.2 -0.96 -1.48 -1.76 -1.88 -1.07 -0.96 -1.05 -0.43 -0.13 0.91 2.14
- - - - - - - - - - - 3.58
- -2.21 - -2.14 -3.57 - -2.8 -0.59 -1.69 0.74 1.52 2.54
-3.18 -4.19 -3.93 -5.57 -4.92 -6.46 -3.01 -1.83 -0.61 0.31 0.88 2.92
0.16 -0.76 -0.17 -0.37 -0.34 -0.52 -0.71 -0.49 -0.26 -0.01 0.42 1.4
- - - - - - -0.57 - 0.22 1.39 2.29 1.4
0.47 -0.95 -2.17 -3.7 -1.95 -1.57 0.07 -0.12 0.32 -0.28 0.56 1.88
- - - - - - - - - - - 3.58
- 0.75 -1.31 0.43 0.32 0.83 -1.64 -0.03 - 0.82 0.39 0.22
2.31 - - - - - 0.52 -0.06 - 0.2 0.16 1.25
- - - - - - - - - - - 3.58
- - - - - -0.45 0.03 -0.45 0.89 0.22 2.17 1.0
- - - - - - - 1.05 - - - 3.31
- - - - 1.92 - - 1.28 - - - 2.53
- 1.09 - - 0.0 - - -0.35 0.11 0.51 1.65 1.29

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.