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Heatmap: Cluster_5 (HCCA clusters)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
1 h after light
3 h after light
5 h after light
7 h after light
9 h after light
11 h after light
1 h after dark
3 h after dark
5 h after dark
7 h after dark
9 h after dark
11 h after dark
Kfl00001_0310 (kfl00001_0310_v1.1)
 3.58 - - - - - - - - - - -
Kfl00003_0500 (kfl00003_0500_v1.1)
 3.58 - - - - - - - - - - -
Kfl00005_0630 (kfl00005_0630_v1.1)
 2.06 0.23 -0.57 -0.77 -0.82 -0.73 -0.96 -0.6 -0.4 -0.34 -0.3 -0.53
Kfl00005_0640 (kfl00005_0640_v1.1)
 3.06 1.88 - - - - - - - - - -
Kfl00009_0690 (kfl00009_0690_v1.1)
 3.58 - - - - - - - - - - -
Kfl00015_0220 (kfl00015_0220_v1.1)
 1.67 0.48 -0.42 -0.95 -0.85 -0.41 -0.15 -0.13 -0.26 -0.52 -0.42 -0.4
Kfl00016_0090 (kfl00016_0090_v1.1)
 2.3 1.66 - 0.43 - - - - 0.39 - - 0.35
Kfl00016_0220 (kfl00016_0220_v1.1)
 3.58 - - - - - - - - - - -
Kfl00018_0540 (kfl00018_0540_v1.1)
 2.62 -0.37 - 0.19 -0.85 - -1.97 -2.19 -1.09 -0.71 -0.59 0.22
Kfl00019_0260 (kfl00019_0260_v1.1)
 1.38 0.44 -0.37 -0.52 -0.48 -0.2 0.07 -0.2 -0.23 -0.34 -0.41 -0.61
Kfl00024_0280 (kfl00024_0280_v1.1)
 3.17 - - - - - - 1.58 - - - -
Kfl00026_0220 (kfl00026_0220_v1.1)
 3.58 - - - - - - - - - - -
Kfl00028_0070 (kfl00028_0070_v1.1)
 2.38 0.87 -0.77 -1.03 -1.16 -0.81 -0.67 -1.1 -1.33 -1.22 -1.01 -1.13
Kfl00029_0040 (kfl00029_0040_v1.1)
 2.54 0.67 -0.61 - - - -0.51 -0.86 -0.58 -0.74 - 0.49
Kfl00036_0050 (kfl00036_0050_v1.1)
 3.58 - - - - - - - - - - -
Kfl00036_0090 (kfl00036_0090_v1.1)
 1.91 0.73 -0.06 -0.74 -0.4 -0.25 -0.55 -1.0 -0.88 -0.78 -0.91 -0.77
Kfl00038_g43 (kfl00038_g43_v1.1)
 0.59 0.64 -0.75 -1.0 -0.04 -0.67 -0.56 0.06 0.24 0.13 -0.17 0.45
Kfl00039_0070 (kfl00039_0070_v1.1)
 3.58 - - - - - - - - - - -
Kfl00045_0290 (kfl00045_0290_v1.1)
 2.24 0.52 -0.99 -1.07 -0.71 -0.46 -0.77 -0.84 -0.73 -0.7 -0.75 -0.82
Kfl00047_0080 (kfl00047_0080_v1.1)
 2.35 1.27 -0.81 -0.42 -0.38 -0.71 -1.07 -2.34 -2.0 -1.89 -1.73 -1.7
Kfl00048_0330 (kfl00048_0330_v1.1)
 2.89 - - - - - - - - - - 2.19
Kfl00054_0240 (kfl00054_0240_v1.1)
 2.45 0.67 -0.81 -1.04 -0.93 -1.09 -0.62 -1.38 -0.95 -1.02 -1.14 -1.36
Kfl00062_g10 (kfl00062_g10_v1.1)
 2.34 -0.12 - 0.7 - - - - -0.88 -0.09 1.23 -0.83
Kfl00078_0050 (kfl00078_0050_v1.1)
 0.78 0.07 -0.09 -0.15 -0.5 -0.05 -0.05 -0.06 -0.14 -0.04 -0.03 -0.09
Kfl00082_0240 (kfl00082_0240_v1.1)
 2.83 - - 1.03 - - - - 1.51 - - -
Kfl00090_0330 (kfl00090_0330_v1.1)
 2.04 0.79 -0.0 -0.58 -0.35 -0.63 -0.79 -1.23 -0.93 -0.91 -0.91 -1.09
Kfl00093_0070 (kfl00093_0070_v1.1)
 2.85 0.79 -3.47 -4.76 -4.55 -3.98 -2.08 -1.13 -1.01 -1.01 -0.62 -0.99
Kfl00109_0295 (kfl00109_0295_v1.1)
 3.58 - - - - - - - - - - -
Kfl00119_0120 (kfl00119_0120_v1.1)
 3.53 - -1.17 - - - - - - - - -
Kfl00140_0010 (kfl00140_0010_v1.1)
 1.99 0.94 -0.25 0.21 -1.07 -0.65 -0.53 -0.75 -1.46 -1.15 -1.53 -0.87
Kfl00155_0090 (kfl00155_0090_v1.1)
 2.38 0.61 -1.33 -0.67 -1.68 -0.23 0.58 -1.96 -0.69 -1.1 -4.17 -2.51
Kfl00164_0120 (kfl00164_0120_v1.1)
 2.99 0.64 -1.33 -1.73 -2.16 -2.33 -1.5 -2.84 -2.4 -2.25 -1.97 -2.06
Kfl00165_0010 (kfl00165_0010_v1.1)
 2.69 -0.62 -1.03 -0.34 -1.69 0.54 -1.62 -2.41 -0.94 -1.7 -1.78 -2.25
Kfl00202_0070 (kfl00202_0070_v1.1)
 2.67 1.08 -0.97 -1.42 -1.32 -1.49 -1.34 -1.93 -1.71 -1.67 -1.63 -1.86
Kfl00202_0080 (kfl00202_0080_v1.1)
 1.45 -0.18 -0.61 -0.6 -0.39 -0.25 -0.14 -0.24 -0.15 -0.22 0.07 -0.16
Kfl00205_0080 (kfl00205_0080_v1.1)
 3.19 -0.34 - 0.0 - - 0.09 - - - - -
Kfl00257_0180 (kfl00257_0180_v1.1)
 2.22 0.84 0.31 -1.24 -1.18 -0.8 -0.97 -2.16 -0.75 -1.33 -0.93 -0.72
Kfl00260_0180 (kfl00260_0180_v1.1)
 1.41 0.15 -0.2 -0.4 -0.04 -0.26 -0.08 -0.38 -0.41 -0.25 -0.39 -0.48
Kfl00260_0190 (kfl00260_0190_v1.1)
 1.71 0.75 -0.41 -0.37 -0.32 -0.4 -0.13 -0.59 -0.62 -0.7 -0.8 -0.89
Kfl00285_0040 (kfl00285_0040_v1.1)
 2.07 0.31 -0.6 -0.27 -0.96 - - -2.33 -2.25 1.06 0.19 -0.11
Kfl00298_0080 (kfl00298_0080_v1.1)
 2.92 -0.11 -1.51 - -0.29 - - - 0.74 -1.54 -1.62 -
Kfl00304_0020 (kfl00304_0020_v1.1)
 2.98 -1.13 -0.95 - - 1.04 -0.8 - - - - -0.98
Kfl00333_0120 (kfl00333_0120_v1.1)
 2.84 - - 0.45 - - - - 1.8 - - -
Kfl00360_0110 (kfl00360_0110_v1.1)
 3.58 - - - - - - - - - - -
Kfl00362_0050 (kfl00362_0050_v1.1)
 2.94 0.32 1.18 - - - -0.3 - - - - -
Kfl00363_0010 (kfl00363_0010_v1.1)
 2.84 1.21 - 1.35 - - - - - - - -
Kfl00371_0020 (kfl00371_0020_v1.1)
 2.37 0.88 0.34 -1.54 -0.52 -1.36 -0.64 -0.97 -1.82 -1.72 -1.78 -1.83
Kfl00398_g16 (kfl00398_g16_v1.1)
 1.66 0.29 -1.72 -0.46 - -0.98 -0.85 -1.2 0.93 0.95 -0.44 -0.97
Kfl00400_0020 (kfl00400_0020_v1.1)
 2.39 0.71 -1.1 -0.98 -0.71 -0.72 -1.01 -1.23 -0.92 -0.95 -1.0 -1.13
Kfl00400_0080 (kfl00400_0080_v1.1)
 3.58 - - - - - - - - - - -
Kfl00445_0070 (kfl00445_0070_v1.1)
 3.58 - - - - - - - - - - -
Kfl00449_0070 (kfl00449_0070_v1.1)
 1.09 0.22 -0.25 -0.33 -0.35 -0.13 -0.24 -0.24 -0.15 -0.12 -0.1 -0.12
Kfl00465_g11 (kfl00465_g11_v1.1)
 1.95 2.63 - - - - - - -0.05 - - -0.02
Kfl00471_0040 (kfl00471_0040_v1.1)
 3.58 - - - - - - - - - - -
Kfl00475_0120 (kfl00475_0120_v1.1)
 3.15 - - - - - - 1.65 - - - -
Kfl00506_0010 (kfl00506_0010_v1.1)
 3.58 - - - - - - - - - - -
Kfl00533_0020 (kfl00533_0020_v1.1)
 3.58 - - - - - - - - - - -
Kfl00561_0030 (kfl00561_0030_v1.1)
 2.06 1.15 0.0 -0.22 -0.45 -1.09 -1.39 -1.82 -2.09 -1.7 -1.37 -0.08
Kfl00640_0060 (kfl00640_0060_v1.1)
 3.58 - - - - - - - - - - -
Kfl00652_0030 (kfl00652_0030_v1.1)
 1.78 0.93 -0.69 -0.31 -0.89 -0.65 -0.57 -0.82 -0.64 -0.59 -0.33 -0.48
Kfl00659_0020 (kfl00659_0020_v1.1)
 2.12 0.84 -5.16 -0.63 -0.64 -2.01 0.56 -1.45 -0.62 -0.17 -1.13 -1.04
Kfl00740_0030 (kfl00740_0030_v1.1)
 3.58 - - - - - - - - - - -
Kfl00891_0050 (kfl00891_0050_v1.1)
 2.84 1.05 -1.41 -1.27 -1.53 -1.73 -1.7 -2.67 -2.43 -2.25 -2.08 -2.13
Kfl01308_0040 (kfl01308_0040_v1.1)
 2.85 - - - - - - 2.26 - - - -
Kfl01361_0015 (kfl01361_0015_v1.1)
 3.1 - - - - - - - 1.78 - - -
Kfl01368_0020 (kfl01368_0020_v1.1)
 3.58 - - - - - - - - - - -
Kfl01755_0010 (kfl01755_0010_v1.1)
 2.81 - - - - - - - 0.4 0.03 0.36 0.43

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.