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Heatmap: Cluster_252 (HCCA clusters)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
1 h after light
3 h after light
5 h after light
7 h after light
9 h after light
11 h after light
13 h after light
15 h after light
1 h after dark
3 h after dark
5 h after dark
7 h after dark
0.81 -0.87 -0.32 -0.21 -0.81 -0.5 0.48 0.59 -0.04 -0.04 -0.04 -0.1
1.3 - -0.75 1.09 1.03 - - - -0.93 0.03 - 1.69
0.12 0.02 0.12 -0.05 -0.2 -0.06 0.01 -0.04 -0.12 -0.05 -0.04 0.24
-0.03 -0.2 0.04 0.22 0.13 -0.13 0.01 -0.2 -0.02 -0.1 0.06 0.15
0.31 -1.44 0.35 -0.62 -0.33 0.03 0.08 -0.59 0.17 0.54 0.01 0.42
-0.81 0.34 0.23 0.89 0.21 -0.63 -0.37 0.11 -0.05 -0.46 -0.39 0.05
0.54 0.11 -0.04 -0.03 -0.34 -0.2 -0.2 -0.43 0.01 -0.35 0.13 0.44
1.59 0.31 -1.67 -0.41 -1.84 0.1 -1.73 - -1.9 -0.47 -0.59 1.75
0.4 -0.1 -0.05 -0.05 0.17 -0.56 -0.5 -0.24 0.33 0.3 0.21 -0.3
0.33 0.24 0.12 -0.1 -0.24 -0.03 -0.04 -0.12 -0.21 -0.17 -0.27 0.32
0.13 -0.14 -0.18 -0.57 -0.2 -0.01 -0.28 0.18 0.19 0.28 0.08 0.28
0.14 -0.02 -0.01 0.08 -0.06 -0.22 -0.13 -0.17 0.09 -0.03 -0.01 0.27
0.01 0.72 -1.14 0.04 -0.18 -0.96 -0.44 0.17 -0.35 0.43 -0.26 0.71
1.1 0.54 0.56 0.19 - - 1.33 -0.98 1.17 - - -0.95
0.23 -0.38 0.37 0.17 0.08 -0.18 0.03 0.4 -1.01 0.17 -0.69 0.17
0.24 0.01 -0.04 -0.2 -0.18 -0.1 0.1 0.05 -0.21 0.06 -0.15 0.32
0.62 0.13 0.16 -0.53 0.01 -0.74 0.16 -0.03 -0.64 -0.46 0.09 0.52
0.32 0.02 0.11 0.05 -0.29 -0.38 -0.11 -0.17 0.15 -0.13 -0.25 0.44
2.94 - - - - - - - - - - 2.11
-0.81 0.56 0.7 -1.42 0.43 0.42 -0.01 -1.6 -0.53 - -0.3 1.29
0.27 0.15 0.07 -0.12 -0.53 -0.3 -0.19 -0.15 -0.02 0.12 -0.21 0.58
0.17 -0.18 0.01 -0.29 -0.01 -0.08 0.16 0.07 -0.24 0.03 -0.05 0.3
1.0 -0.04 -0.41 -0.05 0.41 -0.95 -1.82 -1.15 -0.46 0.53 0.72 -0.12
0.89 - - 2.39 1.37 - - - - - - 1.21
0.12 -1.78 -0.64 1.18 1.17 -0.51 -1.34 - -0.21 0.52 0.79 -1.59
0.15 -0.17 0.24 -0.12 0.15 -0.25 0.04 0.11 -0.28 0.01 -0.3 0.26
0.33 -0.91 0.24 0.3 0.08 0.25 0.24 -0.08 -1.92 -0.19 -0.61 0.7
2.48 - - - - - - - - - - 2.68
0.07 -0.12 0.06 -0.22 -0.03 0.01 0.02 0.01 -0.13 0.18 -0.13 0.22
0.83 -2.74 -1.62 0.3 0.59 -1.43 -1.0 -0.62 0.11 -0.12 0.8 0.81
1.71 - -0.69 - - -0.57 1.46 0.89 0.08 - -0.95 0.33
0.41 0.7 0.8 -3.43 -0.46 -0.03 -0.69 -2.07 -1.64 -0.12 -0.31 1.38
1.31 - -1.69 - -0.32 - 1.17 0.46 0.35 0.41 -0.65 0.62
0.16 -0.33 0.29 0.46 -0.09 -0.51 0.0 -0.46 0.24 0.19 0.31 -0.85
0.22 0.16 0.15 -0.16 -0.1 -0.13 -0.0 -0.14 -0.11 -0.16 -0.09 0.28
0.88 0.08 -0.6 -0.15 -2.78 - -2.28 -0.24 0.23 0.57 0.54 1.16
1.49 -1.61 -1.5 -1.36 0.35 - -1.17 0.84 0.9 0.06 -0.76 0.16
-0.29 -0.03 0.11 -0.0 0.46 -0.22 0.04 0.64 -0.75 0.1 -0.17 -0.4
- 0.53 -1.96 0.74 -0.81 - -0.85 0.03 -0.19 -0.47 0.93 1.58
0.51 -0.15 0.33 -0.89 0.15 -0.0 -0.17 0.01 -0.85 0.39 -1.26 0.67
0.65 0.24 0.09 -0.25 0.22 0.26 0.04 0.09 -0.77 -0.23 -0.79 -0.22
0.65 -0.4 0.52 -0.17 -0.35 0.07 -0.05 0.0 -0.91 -0.86 -0.2 0.67
0.18 -0.16 0.07 -0.36 -0.0 -0.15 0.08 0.08 -0.12 0.13 -0.23 0.35
1.87 - - - 0.18 - 0.67 0.16 - 0.17 1.09 0.31
0.48 -0.21 0.09 0.23 -0.95 -0.45 0.31 -0.58 -0.32 -0.05 0.14 0.57
-0.05 -0.47 -0.18 0.36 0.12 -0.17 0.15 -0.0 -0.08 -0.19 -0.03 0.33
0.27 -0.64 -0.22 -0.23 -0.59 0.08 0.35 -0.05 0.25 -0.01 0.18 0.22
0.42 0.56 -0.03 -0.45 0.12 -0.14 0.03 0.12 -0.27 -0.99 -0.43 0.38
-0.75 -0.83 0.12 0.26 0.91 -0.35 0.21 1.24 -1.56 0.04 -3.45 -0.14
-0.26 -0.08 0.08 -0.21 0.19 0.01 0.14 0.55 -0.17 -0.03 -0.34 -0.11
0.83 1.27 -1.11 -1.16 -0.74 0.3 0.14 -0.5 0.35 -0.72 -1.42 0.0
0.01 1.2 -0.0 -0.98 -0.89 -0.79 -0.29 0.24 -0.85 0.06 -0.36 0.77
0.4 -0.25 0.62 -0.02 -0.86 -2.96 -0.61 -0.32 0.34 -0.31 0.85 0.38
0.56 - 1.48 - 0.01 -0.12 0.09 - 0.9 - - 1.53
0.41 -0.13 0.19 -0.15 -0.17 -0.03 -0.06 -0.12 -0.3 -0.04 -0.48 0.55
0.76 -0.36 0.3 -0.14 0.15 0.19 0.14 0.23 -0.89 -0.1 -0.87 -0.25
-0.04 1.47 -0.19 - 0.28 -0.65 -0.33 -1.49 - 0.22 -2.06 1.57
1.12 -0.36 -0.79 -1.1 -0.6 -1.14 1.1 -0.02 0.59 0.01 -0.68 -0.65
2.91 - - - - - - 2.16 - - - -
0.57 0.26 -0.71 -1.34 -1.07 -0.17 -0.4 0.24 0.77 -0.75 -1.34 1.21
0.11 0.16 0.14 -0.25 0.01 -0.2 -0.04 0.08 -0.28 0.12 -0.29 0.28
0.89 0.0 0.34 0.09 -0.55 -0.55 -0.33 -3.17 0.34 -1.13 -0.02 0.88
1.69 2.34 - - - - - - - - - 1.89
1.93 - 1.43 - 1.07 - - -0.36 - - - 1.38
0.05 -0.02 -0.09 -0.13 0.06 0.2 -0.02 -0.06 -0.15 -0.07 -0.06 0.23
- - - 3.06 - - - - - - - 1.87
0.67 -0.01 0.06 -1.62 0.82 -0.17 -1.99 -2.31 -0.05 0.02 -0.37 1.13
0.59 -0.65 -1.02 -0.29 -0.61 -0.41 -0.52 -0.37 0.65 0.68 -0.48 0.83

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.