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Heatmap: Cluster_95 (HCCA clusters)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
1 h after light
3 h after light
5 h after light
7 h after light
9 h after light
11 h after light
13 h after light
15 h after light
1 h after dark
3 h after dark
5 h after dark
7 h after dark
1.12 -1.65 2.15 -1.29 -1.42 - -1.73 - 0.43 0.89 -0.34 -
1.9 - - 0.78 - - 1.07 - - - 1.49 0.71
0.0 -0.09 -0.18 0.13 -0.06 -0.05 -0.2 -0.09 0.15 0.05 -0.02 0.28
0.41 -0.22 -0.1 0.15 -0.43 0.01 0.1 -0.06 0.07 -0.44 -0.5 0.59
-2.06 -1.69 -0.39 -1.77 -1.78 0.43 0.1 -1.24 0.34 1.14 0.81 1.02
1.91 - - - - - - 1.88 - 0.9 1.43 -
0.33 -0.78 0.24 -0.35 -0.47 -0.23 0.52 0.16 -1.6 -0.52 0.65 0.56
-0.04 -0.6 -0.63 -0.49 -0.9 0.06 0.04 0.04 0.88 -0.08 -0.43 0.88
0.14 -0.38 0.2 -0.06 -0.32 0.06 0.43 -0.08 -0.12 -0.27 -0.09 0.25
-0.01 -0.09 0.15 -0.08 -0.13 -0.19 -0.02 -0.02 -0.03 0.02 -0.09 0.39
-0.44 -0.23 0.22 -0.04 -0.06 -0.98 -0.05 -0.14 0.38 0.12 -0.05 0.66
-0.73 - -0.49 - - 0.66 1.15 - 1.68 -0.25 - 1.5
-0.08 -0.19 -0.05 -0.02 0.06 0.16 -0.15 -0.3 0.28 -0.32 0.06 0.39
-0.03 -0.91 0.05 0.25 -0.04 -0.11 -0.33 -0.32 0.46 0.11 -0.65 0.75
-0.43 -2.27 -0.4 -1.23 0.38 -1.71 0.05 -2.25 -0.53 1.11 1.52 0.37
-0.03 -0.21 -0.06 0.0 -0.1 -0.06 -0.07 -0.15 0.4 -0.26 0.06 0.33
-0.25 -0.03 -0.08 0.18 -0.07 0.35 -0.09 -0.26 -0.12 -0.17 -0.12 0.45
0.38 -0.72 -0.71 -0.22 -0.15 -0.62 -0.6 -0.21 0.4 0.28 0.97 0.07
0.09 0.05 -0.1 0.02 0.12 0.15 -0.37 -0.29 -0.07 -0.39 0.01 0.53
2.56 2.61 - - - - - - - - - -
0.12 -0.31 0.18 -0.61 -0.39 0.04 -0.02 -0.79 -0.52 -0.84 1.13 0.6
0.39 1.13 0.68 -2.39 - -0.87 0.48 -0.08 0.49 0.23 -0.03 -1.87
0.95 -0.61 -0.37 -1.39 -1.43 -0.07 0.78 0.16 1.21 - -0.49 0.11
- - 1.15 0.58 0.58 - -0.84 -1.12 -1.3 - 1.6 1.21
1.35 - 1.57 - - - - - - - 1.88 1.48
0.18 -0.05 -0.38 0.33 0.26 0.34 -0.31 0.33 -0.55 -0.24 -1.27 0.48
-0.23 -0.23 0.0 0.02 -0.16 0.11 -0.09 0.12 0.19 0.11 -0.18 0.24
0.07 -0.07 1.0 -2.11 0.39 0.48 -0.61 -1.42 0.3 -0.28 0.35 -0.5
-0.05 -0.29 1.16 -0.64 -0.68 -1.24 -1.35 -1.08 -0.46 0.85 0.74 0.29
1.46 - 0.85 0.22 - -0.04 0.75 - -1.39 - - 1.69
- - 2.0 - -0.02 0.84 - - - - 1.7 0.97
2.32 1.85 - - - - - - 0.66 - - 0.87
1.1 - - - - - - - 2.14 - 1.63 1.23
1.92 -0.19 -0.08 - - 1.16 - - -0.12 - - 1.69
-0.01 -0.3 0.0 -0.11 0.03 0.03 0.03 0.1 -0.01 -0.17 0.13 0.2
-0.31 - 1.46 - 0.1 - 0.19 - - 0.9 -0.4 1.85
2.12 - -1.71 - - 0.48 0.58 - 0.16 -0.06 - 1.25
0.63 -3.62 -1.88 -0.94 0.1 -0.72 -2.06 -2.11 1.25 0.3 0.96 0.91
-0.02 -0.49 -0.24 0.01 0.19 -0.02 -0.0 -0.15 0.28 -1.04 0.21 0.65
0.51 -1.07 0.32 0.05 0.27 -0.42 -0.36 -0.58 -0.12 0.06 -0.32 0.72
-0.19 -0.44 0.1 0.05 0.32 0.22 0.15 -0.64 -0.1 -0.15 0.3 0.07
-0.3 -0.23 -0.23 0.12 0.02 0.17 -0.23 -0.18 0.33 -0.14 0.18 0.29
1.44 - - - - - - 1.42 - 1.43 1.97 -
-0.72 -1.5 0.79 -0.06 -0.19 -0.81 0.49 -0.14 -0.69 0.44 0.62 0.11
0.09 -0.2 -0.06 0.01 -0.09 0.04 0.18 0.04 -0.1 -0.23 0.09 0.17
0.64 -0.76 0.84 -0.64 - -0.66 0.55 -0.73 - 0.43 -1.04 1.53
0.82 0.09 -0.98 -1.09 -0.47 -3.21 0.29 -0.8 0.03 -0.58 0.54 1.28
0.62 -0.26 -0.75 -0.94 -0.49 -0.46 1.07 -1.05 0.92 -0.82 -0.07 0.11
0.9 - - - - - 2.19 - - - 1.82 1.04
-0.02 0.39 1.8 - 0.46 - - - - 1.45 -0.04 0.18
0.16 -0.25 -0.05 -0.2 -0.11 -0.18 0.06 0.01 0.12 -0.05 0.05 0.34
-0.87 0.17 0.87 -0.01 -2.06 -0.43 1.22 -0.52 -2.49 -0.94 0.54 0.42
1.02 -1.85 0.54 0.08 -2.23 0.04 -0.05 0.02 -1.4 -1.54 0.7 0.68
0.99 -0.04 0.05 -0.67 -1.89 - -0.5 -2.21 1.24 -0.58 0.43 0.85
0.43 - -1.39 -0.24 0.46 -1.27 -1.06 -1.34 0.99 -0.56 1.19 0.85
0.12 -0.23 -0.21 -0.03 -0.24 0.1 0.09 0.07 -0.0 -0.27 0.22 0.25
0.79 -0.55 -2.77 -1.12 0.54 -0.05 -0.56 0.7 -1.06 0.67 - 1.13
1.24 0.72 - 0.85 -0.33 -1.37 0.52 -1.18 0.52 - - 0.77
0.88 - 0.05 0.43 - 0.17 1.82 - - - - 1.64
-0.14 -0.71 0.33 - -0.19 0.52 0.96 -0.26 0.22 -1.26 0.39 0.3
- - 1.31 - - - 0.64 0.62 0.17 0.55 1.39 0.27
0.73 0.03 0.28 -0.64 -0.36 -1.09 -1.55 -3.77 -0.56 -0.11 0.83 1.27
2.12 - - - - - - - - 1.11 1.65 1.25
0.68 -2.67 0.41 -0.31 0.1 -0.91 -0.03 -0.22 -0.44 0.06 0.26 0.75
-0.07 - -0.2 - - 1.12 - -0.14 0.38 1.14 1.14 0.47
0.6 -0.56 -0.9 0.17 -0.46 -0.09 -0.25 -0.59 0.55 -0.54 -0.31 1.01
1.64 - -1.01 - - -0.81 0.91 - 0.94 - 0.08 1.57
0.6 -0.7 -0.27 -0.35 -0.42 0.03 -1.09 -1.15 0.55 -0.92 0.68 0.97
0.67 -0.36 0.23 0.15 -0.54 -0.6 0.25 -1.08 0.72 -0.66 -0.08 0.16
0.58 -0.56 -0.05 0.1 -0.7 0.34 -0.5 -0.15 0.06 -0.19 -0.91 0.88
-0.35 -0.51 -0.03 -0.35 0.05 -1.01 0.13 -0.16 -0.23 0.13 0.66 0.77
1.53 - - - - - - - 2.57 - - 1.66
1.46 - 1.69 - - - - - 0.47 0.94 1.44 -
2.56 2.61 - - - - - - - - - -
- - 2.46 - - - - - - 2.7 - -
1.36 - 1.53 - - - - - - - 1.89 1.5
0.69 0.11 - 0.72 0.11 0.33 - 0.27 -0.04 - -0.37 1.24
-0.03 -0.27 0.08 -0.06 -0.11 -0.36 0.2 -1.01 0.3 -0.56 0.69 0.38

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.