Heatmap: Cluster_180 (HCCA clusters)

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(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	1 h after light	3 h after light	5 h after light	7 h after light	9 h after light	11 h after light	13 h after light	15 h after light	1 h after dark	3 h after dark	5 h after dark	7 h after dark
Pp1s107_207V6	0.48	-0.04	0.32	-0.12	-0.05	-0.46	0.28	-0.06	-0.15	-0.19	-0.05	-0.23
Pp1s113_104V6	0.18	0.02	-0.01	0.02	-0.1	-0.03	-0.07	0.01	0.18	0.04	-0.11	-0.17
Pp1s113_124V6	0.58	-0.0	-0.26	-1.46	-0.02	-0.46	0.04	-0.4	0.27	0.77	0.57	-1.3
Pp1s113_2V6	0.15	0.06	-0.12	-0.17	-0.19	0.06	0.04	0.07	0.12	0.0	0.01	-0.07
Pp1s118_151V6	0.25	-0.04	-0.11	0.02	-0.16	-0.04	0.07	0.07	0.01	-0.07	0.01	-0.05
Pp1s120_166V6	0.34	0.08	-0.1	0.19	-0.12	-0.1	-0.08	-0.01	0.1	-0.1	-0.12	-0.17
Pp1s124_4V6	0.01	-0.08	-0.09	-0.05	-0.03	0.09	0.11	0.14	0.12	0.0	-0.0	-0.29
Pp1s129_113V6	0.3	0.03	0.01	-0.07	-0.12	-0.06	-0.02	-0.02	0.12	-0.07	-0.08	-0.09
Pp1s129_222V6	0.34	0.03	-0.16	0.07	-0.21	-0.34	-0.07	-0.0	0.16	0.14	0.08	-0.17
Pp1s13_129V6	0.09	-0.34	-0.07	-0.0	0.01	0.08	0.05	0.01	0.02	0.04	0.13	-0.07
Pp1s13_206V6	0.04	-0.03	-0.11	-0.17	0.08	-0.07	0.13	0.08	0.1	0.09	0.14	-0.38
Pp1s13_89V6	2.54	-	-	-	-	-0.27	-	-	0.96	1.06	0.42	-
Pp1s143_133V6	0.17	0.18	0.03	-0.08	-0.17	-0.0	0.08	0.13	0.06	-0.29	-0.15	-0.04
Pp1s152_48V6	0.06	-0.05	-0.19	-0.15	0.04	-0.07	0.05	0.16	0.13	0.02	0.15	-0.22
Pp1s156_145V6	0.32	0.11	-0.0	0.07	-0.08	-0.01	0.09	0.16	-0.02	-0.2	-0.25	-0.3
Pp1s157_79V6	0.08	0.03	-0.02	-0.02	0.01	0.06	0.12	0.06	0.11	-0.13	-0.17	-0.18
Pp1s159_1V6	0.0	0.05	0.0	-0.03	-0.15	-0.21	-0.1	-0.01	0.28	0.15	0.04	-0.08
Pp1s162_57V6	0.09	-0.26	-0.26	0.06	-0.01	0.06	-0.24	-0.03	0.29	0.18	0.07	-0.05
Pp1s162_82V6	0.14	0.05	0.04	-0.38	-0.14	-0.21	0.04	0.11	0.13	0.09	0.02	0.02
Pp1s163_87V6	0.18	0.02	-0.15	-0.14	-0.07	-0.07	0.07	0.18	0.08	-0.02	-0.0	-0.15
Pp1s167_68V6	0.44	-0.27	0.01	-0.03	-0.01	-0.57	-0.36	-0.17	0.39	0.48	0.28	-0.8
Pp1s168_84V6	0.2	-0.01	-0.13	-0.17	-0.02	0.06	0.28	0.11	0.03	-0.19	-0.15	-0.11
Pp1s16_137V6	-0.04	0.13	-0.01	-0.13	-0.1	-0.01	0.02	-0.01	0.22	0.05	-0.1	-0.07
Pp1s16_349V6	0.66	0.04	-0.27	-0.83	-0.02	-0.11	0.19	0.13	0.07	-0.08	-0.03	-0.2
Pp1s171_117V6	1.0	0.31	-1.98	0.64	-0.13	1.25	-	-	-1.72	0.92	0.2	-1.65
Pp1s173_93V6	0.21	-0.01	-0.16	-0.14	-0.09	0.02	0.04	0.12	0.2	0.04	-0.19	-0.11
Pp1s179_56V6	0.47	-0.01	-0.04	0.03	-0.06	-0.06	-0.14	-0.14	0.07	-0.02	-0.09	-0.16
Pp1s18_287V6	-0.0	-0.0	0.04	0.05	-0.02	0.02	0.01	0.19	0.08	-0.11	-0.12	-0.17
Pp1s190_39V6	0.39	-0.11	-0.11	-0.2	-0.06	0.05	0.01	-0.07	-0.0	-0.05	0.1	-0.05
Pp1s194_88V6	0.24	0.05	-0.14	-0.21	-0.13	0.01	0.15	0.14	0.05	0.0	-0.01	-0.25
Pp1s1_769V6	0.48	-0.11	-0.13	0.04	-0.09	-0.06	-0.06	0.05	0.05	-0.03	-0.03	-0.24
Pp1s1_804V6	0.35	0.06	-0.08	-0.04	-0.12	0.08	-0.04	-0.1	-0.08	0.02	-0.04	-0.08
Pp1s1_831V6	0.23	-0.23	0.14	-0.37	0.05	-0.06	-0.06	-0.34	0.26	0.23	0.21	-0.27
Pp1s1_835V6	0.06	-0.16	-0.09	-0.29	-0.14	-0.23	0.03	0.21	0.12	0.25	-0.06	0.19
Pp1s206_45V6	0.4	0.68	-0.49	-0.27	-0.63	0.66	-0.15	-0.15	-0.19	-0.34	0.08	-0.34
Pp1s212_65V6	0.33	-0.11	-0.16	-0.19	-0.09	-0.02	-0.15	0.13	0.04	0.11	0.05	-0.03
Pp1s217_4V6	-0.21	-0.06	0.12	0.11	0.05	-0.26	-0.12	0.04	0.23	0.06	-0.11	0.06
Pp1s246_103V6	0.27	0.14	0.1	-0.09	-0.12	-0.19	-0.04	0.18	0.17	-0.15	-0.07	-0.32
Pp1s246_97V6	0.36	-0.03	-0.26	-0.09	-0.13	0.06	0.02	0.03	0.0	-0.12	0.05	0.01
Pp1s259_122V6	0.38	-0.11	-0.16	-0.1	-0.17	0.0	0.07	-0.04	0.1	0.01	0.09	-0.18
Pp1s25_10V6	0.57	0.1	-0.11	-0.0	-0.16	-0.03	-0.02	-0.11	-0.25	0.13	-0.06	-0.26
Pp1s25_29V6	0.28	0.02	-0.11	-0.23	-0.15	0.03	0.09	0.22	0.15	-0.01	-0.2	-0.21
Pp1s261_56V6	1.69	1.41	0.13	-	-1.36	1.4	-3.03	-	-1.05	-1.13	-0.12	-
Pp1s262_39V6	0.09	0.17	-0.12	-0.11	-0.21	-0.0	0.13	0.09	0.05	0.02	-0.09	-0.08
Pp1s263_108V6	0.23	-0.14	-0.04	0.18	0.16	0.02	0.13	0.07	0.07	-0.17	-0.23	-0.42
Pp1s263_83V6	0.16	0.06	-0.04	0.01	-0.05	0.02	0.06	-0.0	-0.03	-0.13	-0.12	0.03
Pp1s27_132V6	0.28	0.23	0.08	-0.07	-0.03	-0.13	0.01	0.1	0.01	-0.08	-0.25	-0.25
Pp1s285_2V6	-0.1	-0.02	0.21	0.22	-0.0	0.12	0.22	0.12	-0.02	-0.27	-0.3	-0.32
Pp1s285_54V6	0.35	0.18	0.04	-0.04	-0.15	-0.14	0.05	-0.01	0.02	-0.08	-0.14	-0.18
Pp1s28_387V6	0.42	0.24	-0.12	-0.09	-0.2	0.01	0.0	0.01	-0.04	-0.12	-0.14	-0.1
Pp1s2_204V6	0.96	0.31	0.07	-0.34	-0.85	0.34	0.19	0.32	-0.06	-0.42	-1.23	-0.66
Pp1s302_43V6	0.03	0.28	0.1	-0.03	-0.01	0.13	0.42	0.2	0.3	-0.22	-1.04	-0.81
Pp1s312_73V6	0.47	0.12	-0.24	-0.46	-0.12	-0.15	0.03	0.01	0.01	0.04	0.13	-0.04
Pp1s31_254V6	0.24	-0.07	-0.07	-0.06	-0.09	-0.04	0.05	0.06	0.09	0.04	-0.07	-0.12
Pp1s32_49V6	0.34	0.17	-0.11	-0.28	0.05	0.02	-0.04	-0.04	-0.06	-0.19	0.03	0.01
Pp1s333_27V6	1.36	-0.14	-0.69	0.13	-0.3	-0.85	-0.26	-0.39	0.42	0.24	-0.1	-1.38
Pp1s335_60V6	0.08	-0.17	-0.02	0.24	0.17	-0.01	0.13	0.04	0.06	-0.19	-0.24	-0.19
Pp1s33_251V6	0.27	0.08	-0.05	-0.22	-0.05	0.06	0.05	-0.01	0.21	-0.11	-0.23	-0.09
Pp1s33_61V6	0.44	-0.05	-0.13	0.02	-0.03	-0.03	-0.02	0.04	0.1	-0.08	-0.21	-0.19
Pp1s344_18V6	-0.74	1.31	-0.68	-1.47	-0.61	-0.44	0.48	-0.38	1.29	0.32	-1.35	-1.76
Pp1s34_402V6	0.04	0.07	-0.09	-0.13	-0.18	-0.03	-0.07	0.14	0.02	0.1	0.11	-0.01
Pp1s363_8V6	0.61	-0.09	0.16	-0.11	-0.08	-0.35	0.28	0.1	-0.01	-0.03	-0.2	-0.67
Pp1s368_3V6	0.18	0.02	-0.09	0.04	0.02	-0.06	0.23	0.09	-0.0	-0.12	-0.15	-0.24
Pp1s36_43V6	-0.01	0.09	-0.3	-0.34	-0.18	-0.35	0.0	0.3	0.18	0.22	0.15	0.04
Pp1s389_45V6	0.02	-0.13	-0.08	-0.04	0.05	-0.13	0.11	0.17	0.05	0.03	0.2	-0.33
Pp1s397_39V6	0.2	0.0	-0.02	-0.06	-0.03	0.02	0.11	0.04	0.15	-0.21	-0.2	-0.06
Pp1s409_19V6	0.14	-0.19	-0.12	-0.08	0.07	0.07	0.06	0.25	0.09	-0.13	-0.03	-0.21
Pp1s434_22V6	0.42	0.14	0.05	0.05	-0.05	-0.19	-0.03	-0.06	-0.01	-0.07	-0.15	-0.24
Pp1s47_244V6	-0.14	-0.15	-0.27	-0.05	0.14	0.07	0.23	0.22	0.23	-0.06	-0.01	-0.36
Pp1s4_106V6	0.01	0.05	-0.2	-0.0	-0.19	-0.12	-0.01	0.17	0.08	0.15	0.13	-0.13
Pp1s4_128V6	0.06	-0.12	-0.1	0.17	0.04	-0.19	-0.09	0.16	0.26	-0.08	-0.02	-0.16
Pp1s50_127V6	0.34	0.08	-0.07	-0.08	-0.08	-0.06	-0.12	0.1	0.06	-0.08	-0.12	-0.06
Pp1s51_65V6	0.33	-0.13	-0.12	-0.27	-0.09	-0.52	-0.46	0.01	0.65	0.47	0.36	-1.11
Pp1s51_99V6	0.15	0.03	-0.11	0.01	-0.14	0.05	0.09	0.12	0.28	-0.08	-0.19	-0.3
Pp1s540_4V6	0.24	-0.05	-0.05	-0.1	-0.01	-0.03	0.01	0.16	0.12	-0.09	-0.12	-0.14
Pp1s54_263V6	0.11	0.05	-0.09	-0.08	-0.05	-0.01	0.07	0.09	0.02	-0.09	-0.01	-0.03
Pp1s55_27V6	0.22	0.04	-0.02	0.02	-0.02	-0.08	-0.15	0.1	0.1	0.02	-0.04	-0.24
Pp1s56_214V6	0.98	0.69	0.13	0.17	0.17	-0.12	-0.15	-0.38	-1.07	-0.42	-0.59	-0.75
Pp1s58_41V6	0.17	-0.0	-0.08	0.06	-0.01	-0.09	-0.0	0.07	0.21	-0.12	-0.1	-0.15
Pp1s59_355V6	0.24	0.17	-0.07	-0.07	-0.13	0.0	0.02	0.04	-0.1	-0.06	-0.01	-0.09
Pp1s60_286V6	0.23	-0.0	-0.04	-0.06	-0.01	0.03	0.08	-0.01	0.0	-0.05	-0.17	-0.04
Pp1s60_322V6	0.27	-0.24	-0.68	-0.45	0.1	-0.18	0.38	0.26	0.14	0.09	0.16	-0.22
Pp1s613_17V6	2.23	1.43	-	-	-	2.2	-	-	-	-	-	-
Pp1s65_100V6	0.12	0.06	-0.11	-0.03	-0.12	0.07	0.07	0.1	0.01	-0.13	0.06	-0.13
Pp1s65_122V6	0.24	-0.62	-0.18	0.39	-0.31	-1.48	-0.13	0.59	0.51	0.89	0.06	-3.65
Pp1s71_300V6	-0.11	-0.21	-0.07	0.06	-0.09	-0.0	-0.0	0.03	0.22	-0.0	0.0	0.11
Pp1s79_2V6	0.27	-0.02	-0.0	0.1	-0.0	-0.05	0.12	0.14	0.07	-0.11	-0.23	-0.4
Pp1s7_338V6	0.12	0.07	-0.03	0.11	0.02	-0.11	0.01	0.03	0.01	-0.04	-0.07	-0.16
Pp1s83_157V6	-0.13	-0.05	-0.01	-0.11	-0.22	0.08	-0.02	0.05	0.22	0.08	0.04	0.01
Pp1s86_152V6	0.26	0.06	-0.38	0.23	0.1	-0.19	-0.02	-0.04	0.08	-0.04	-0.04	-0.14
Pp1s86_213V6	0.4	-1.89	0.39	-	-0.12	0.1	0.8	-0.22	0.32	0.79	-0.24	-0.57
Pp1s87_107V6	0.3	0.11	-0.06	-0.08	-0.04	-0.0	0.01	0.09	-0.0	-0.13	-0.16	-0.11
Pp1s88_178V6	0.25	-0.05	-0.08	0.01	-0.05	-0.1	0.04	0.12	0.1	-0.05	-0.09	-0.15
Pp1s97_119V6	0.44	0.01	0.11	-0.15	-0.14	0.07	0.19	0.2	0.03	-0.22	-0.27	-0.49
Pp1s99_13V6	-0.04	-0.03	-0.18	-0.13	0.02	-0.1	0.13	0.18	0.1	0.06	0.06	-0.12
Pp1s9_119V6	0.01	-0.02	-0.03	-0.05	-0.06	-0.03	0.01	-0.02	0.14	0.08	-0.01	-0.04

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.