Heatmap: Cluster_71 (HCCA clusters)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	1 h after light	3 h after light	5 h after light	7 h after light	9 h after light	11 h after light	13 h after light	15 h after light	1 h after dark	3 h after dark	5 h after dark	7 h after dark
Pp1s101_19V6	-	0.68	0.92	-0.64	0.36	-	-0.21	-	1.15	0.93	0.67	-
Pp1s107_164V6	-1.37	0.65	-0.27	1.25	-0.22	-2.23	-1.05	-1.02	-0.28	0.27	0.54	0.38
Pp1s10_337V6	-1.75	-2.52	-0.24	-	1.46	0.46	0.41	-2.5	-0.75	0.12	0.67	0.84
Pp1s118_173V6	-	-	-	-	1.91	2.74	-	-	-	0.64	-	-
Pp1s119_107V6	-0.06	0.04	-0.01	0.07	-0.07	-0.19	-0.02	-0.06	-0.07	0.09	0.15	0.09
Pp1s129_65V6	0.25	-0.09	0.24	-0.46	0.23	-0.23	0.1	0.28	-0.29	-0.44	-0.29	0.35
Pp1s12_288V6	-	-	1.52	-	0.56	-0.35	0.39	0.81	0.71	-0.72	0.65	-
Pp1s131_95V6	-	-	0.63	1.6	2.09	-	-	-	-	-	1.66	-
Pp1s137_257V6	-0.43	0.01	-0.19	-0.22	0.16	0.04	-0.0	0.13	0.21	0.1	0.11	-0.06
Pp1s137_64V6	-	-	-	-	1.36	2.07	-0.61	-0.2	0.26	-	-	1.34
Pp1s13_221V6	-	-	1.82	-	-	-	-	2.42	1.65	-	-	-
Pp1s144_47V6	-0.2	-1.48	-0.91	0.57	0.23	-2.29	-0.49	0.1	0.04	0.15	1.23	0.14
Pp1s145_150V6	0.8	-	0.07	-	1.08	-	-1.36	0.76	0.79	0.55	0.48	-1.22
Pp1s149_135V6	-1.87	0.57	-2.96	-2.59	1.21	-1.72	0.25	0.99	0.79	-0.18	-0.62	-0.16
Pp1s152_118V6	-	-	-	-	1.1	1.47	0.2	0.4	0.01	-	1.85	-
Pp1s152_158V6	-2.86	-0.69	-3.16	0.51	-1.57	0.87	-0.86	-0.92	-1.6	-0.31	2.23	-0.68
Pp1s153_107V6	-1.11	-0.71	0.13	-0.27	0.86	-1.23	0.93	-0.64	0.76	-0.2	-0.85	0.12
Pp1s167_70V6	-	-0.53	-0.08	-0.13	-1.79	-1.69	-0.69	0.36	1.15	0.68	1.64	-
Pp1s173_41V6	-0.02	-0.1	0.01	-0.18	0.16	-0.19	0.24	-0.08	0.03	0.05	0.1	-0.09
Pp1s174_99V6	0.03	0.04	-0.03	0.4	-0.3	-0.15	0.03	0.02	0.17	-0.12	0.07	-0.3
Pp1s177_53V6	-0.2	-0.24	-0.03	0.04	0.14	0.06	0.07	-0.03	0.16	0.04	-0.08	0.01
Pp1s188_37V6	-0.04	-1.81	-0.68	-	1.26	-1.94	0.39	0.32	0.33	0.84	0.17	-0.47
Pp1s199_79V6	0.06	-	0.39	-1.75	0.58	-1.3	-0.69	0.42	0.51	-0.05	1.09	-0.06
Pp1s1_5V6	-	-0.75	-0.59	0.62	1.0	1.72	0.06	-1.68	0.64	-	-	0.01
Pp1s1_850V6	-0.62	-	0.55	-	0.96	-1.91	-0.64	0.63	1.0	0.46	0.56	-0.67
Pp1s20_315V6	-	-0.68	0.58	0.68	-1.22	-0.23	-1.04	-0.3	0.41	-0.67	1.82	-2.23
Pp1s220_96V6	-	-	-	-	2.54	-	-	-	-	-	2.63	-
Pp1s22_374V6	-0.54	-0.38	0.41	-	-0.32	-0.22	-	1.03	-0.0	1.87	-0.22	-
Pp1s22_47V6	0.1	-0.97	-1.12	-	0.91	-	0.5	-0.02	0.95	-2.17	1.28	0.14
Pp1s249_68V6	0.42	-	-0.92	1.46	-	-0.66	-0.74	-1.32	0.87	-1.8	1.72	-1.59
Pp1s257_60V6	1.62	-	-	1.0	1.77	0.61	-	-	-	-	0.99	-
Pp1s25_41V6	-0.53	-	-1.78	-	1.02	-1.43	-0.48	0.21	2.02	0.82	-0.11	-
Pp1s25_9V6	0.77	-	-	-	2.04	1.06	-0.39	-	-0.32	-0.5	0.86	-
Pp1s277_17V6	1.36	-	-	-	0.94	-	-0.8	-	1.18	1.42	0.45	-0.66
Pp1s27_222V6	0.26	-0.8	0.08	0.79	0.24	-0.56	0.03	-1.14	-0.4	0.47	0.67	-1.46
Pp1s28_212V6	-	-1.28	0.67	-	0.28	-	0.6	1.33	1.69	0.59	-	-
Pp1s29_326V6	-	-	1.45	0.75	1.45	-0.78	-	-	0.04	-0.12	1.22	-
Pp1s2_485V6	-	-1.6	0.01	1.87	-	-	0.55	-	-	-0.78	2.1	-0.52
Pp1s303_32V6	0.86	-	-0.0	-	1.06	1.17	-0.75	-1.31	0.65	-0.19	-0.33	-0.74
Pp1s316_56V6	-	-0.52	-	-	1.37	-0.78	0.1	1.34	0.84	-	1.46	-
Pp1s325_48V6	-1.59	-2.23	0.33	0.73	0.56	-0.84	0.21	-0.95	-0.0	0.12	0.87	-0.11
Pp1s330_20V6	0.08	-0.67	-1.17	-0.2	0.07	-0.64	-0.36	0.56	0.69	0.36	0.35	-0.19
Pp1s334_43V6	1.66	-	-1.19	-	1.39	0.37	-1.09	0.41	-1.0	-	0.75	-0.95
Pp1s335_23V6	-	-	-	2.77	-	-0.83	0.86	-	-	1.49	-	-
Pp1s33_142V6	-	-0.44	-0.01	0.86	1.05	0.3	0.38	-1.59	0.07	-0.59	0.62	-1.87
Pp1s342_19V6	-0.45	-0.38	-0.01	-0.46	0.27	-0.41	0.2	0.31	0.2	0.1	-0.15	0.38
Pp1s36_285V6	-	-	-	-	2.02	-	1.86	-	-	-	2.11	-
Pp1s373_14V6	-0.14	-0.01	-0.19	-0.02	0.02	-0.08	-0.04	0.1	0.31	-0.1	0.03	0.06
Pp1s37_44V6	-	-	-	-	1.81	-	-	-	-	1.54	2.49	-
Pp1s3_336V6	0.07	-0.45	0.01	0.05	0.17	-0.06	0.0	-0.02	0.25	-0.31	-0.05	0.2
Pp1s40_79V6	-	-	-	-	-	2.32	0.19	-	-	-	2.25	0.15
Pp1s415_10V6	-0.65	-0.06	-0.7	-0.36	0.39	0.13	0.14	0.24	0.18	0.22	0.25	-0.25
Pp1s417_18V6	0.27	-0.76	-0.05	-0.44	0.24	-0.86	0.28	0.43	0.32	-0.52	0.01	0.34
Pp1s42_162V6	-	-	0.43	1.0	-1.7	-	-0.05	-1.29	1.18	-0.17	1.68	-0.72
Pp1s42_273V6	-0.62	-0.13	-0.11	-0.02	0.05	-0.06	0.09	0.04	0.33	0.03	0.17	0.04
Pp1s44_283V6	-	-	1.53	-	1.62	-	1.46	-	-	-	1.72	-
Pp1s44_306V6	-	0.4	-0.39	-	0.56	-1.05	0.28	-0.12	1.13	0.36	0.23	0.24
Pp1s44_336V6	-	-1.07	-0.76	-0.11	0.8	-0.02	0.49	0.04	0.57	0.29	0.41	-0.32
Pp1s469_5V6	-	1.24	-	0.14	0.45	1.82	0.29	-	0.16	-0.98	-0.33	-
Pp1s469_7V6	-0.77	0.22	-0.11	-0.47	0.3	-0.78	0.16	0.35	0.44	0.48	0.14	-0.9
Pp1s49_70V6	-	-	-	-	2.87	-	-	-	-	-	-	2.23
Pp1s50_138V6	-	-	-0.16	-	2.42	2.13	-	-	-	-	0.49	-
Pp1s5_297V6	-	-	-	-	2.59	-	0.43	-	0.52	-	1.68	-
Pp1s5_358V6	-0.32	-0.17	-0.01	0.04	0.24	0.04	0.11	-0.04	0.13	-0.12	-0.03	0.07
Pp1s63_148V6	-0.56	-	-0.07	-	1.25	0.47	0.86	-	-0.18	-0.2	-1.47	1.42
Pp1s65_221V6	-	0.18	0.32	-1.77	1.73	-0.95	-0.39	-0.21	-	0.96	0.94	-
Pp1s66_192V6	-0.32	0.23	1.63	-	-1.5	-1.22	-	1.4	1.21	0.25	-	-
Pp1s67_44V6	-0.24	-0.47	-0.23	0.78	-0.06	-0.09	0.12	-0.91	0.27	-0.18	0.3	0.03
Pp1s74_137V6	-	-	-	-	2.62	-	-	0.36	-0.45	-0.21	-	1.57
Pp1s79_168V6	-	-	-	2.7	-	-	-	-	1.01	1.81	-	-
Pp1s79_275V6	-	-	-1.08	-	2.47	1.53	-	1.01	-1.06	-0.72	-	-
Pp1s7_331V6	-1.09	0.58	-0.27	1.6	1.1	-2.0	-0.12	-	-1.37	0.51	-1.7	-0.45
Pp1s88_32V6	-	-	-	2.5	-	-	-1.11	-	-1.04	1.83	0.88	-
Pp1s8_27V6	-0.84	-0.32	0.17	1.36	-2.03	-1.74	-1.74	-0.59	-0.91	0.78	1.06	0.14
Pp1s96_72V6	-	-	-	0.09	2.31	1.74	-1.5	-	-1.4	-	-	0.94
Pp1s97_140V6	-	-	-	-	-	1.8	-	-	2.0	-	2.18	-
Pp1s9_382V6	-0.04	-0.17	-0.13	-0.17	0.1	-0.13	0.14	0.08	0.12	0.14	-0.18	0.18

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.