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Heatmap: Cluster_133 (HCCA clusters)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
1 h after light
3 h after light
5 h after light
7 h after light
9 h after light
11 h after light
13 h after light
15 h after light
1 h after dark
3 h after dark
5 h after dark
7 h after dark
0.68 -0.1 1.46 - 1.7 - 0.91 - - - - 0.66
0.38 - 0.52 - 1.43 0.58 2.04 -1.64 -0.68 - - -
- - - - 1.74 0.84 2.51 - 0.23 - - -
-0.2 1.27 0.58 - 0.87 0.25 0.77 - -1.71 0.82 - -1.22
- -3.05 -1.12 -2.71 -1.01 -0.78 1.74 0.59 -0.31 1.41 0.9 -
- 1.1 - 1.37 0.71 -2.16 1.19 0.42 - - 0.67 -2.27
- - - - 2.52 - - - - - 2.64 -
- 0.63 0.31 2.09 -0.78 0.5 -0.76 - 1.23 - - -
- - 0.66 - 1.9 - - - - - 2.74 -
- - - - 2.88 - 2.21 - - - - -
-0.32 1.04 0.35 - 0.68 1.24 1.38 - -0.06 -1.59 - -
- 0.69 - 1.44 0.88 - 1.18 - 0.88 -1.07 -0.56 -0.82
1.06 1.1 0.46 1.85 - - - - 1.48 - - -
- - - - - -0.29 1.82 0.41 -0.51 -0.23 2.25 -
-0.37 1.49 0.55 0.75 -1.7 0.01 0.16 - 0.05 - 0.58 -1.69
-0.41 0.16 -0.2 -0.23 -0.1 0.15 0.35 -0.11 0.23 0.1 0.16 -0.32
- 1.84 - 2.35 -0.4 - - - - - 1.35 -
- - - - 1.87 1.77 2.3 - - - - -
0.96 1.42 0.5 - 0.17 0.52 0.09 -0.23 -0.11 -0.82 - -
- - -1.13 2.04 0.69 0.22 0.9 - 0.51 -0.61 -0.48 -
-1.43 0.79 -0.0 -0.24 0.32 0.23 -0.03 0.16 -0.43 -0.01 -0.24 -0.08
- - 0.13 1.14 0.29 0.98 -2.33 -0.73 -2.68 -1.25 1.97 -2.18
- - - - - - - - - - 2.64 2.53
- - -0.71 -0.35 1.11 -0.36 0.78 -0.2 -0.52 0.89 1.33 -
0.27 - - - - - 2.29 - 0.0 0.02 1.95 -
- - 0.96 0.37 0.27 1.36 0.5 - 1.19 - 0.36 -
-0.96 -1.06 0.21 0.36 1.33 -2.86 1.18 -0.22 -0.59 -1.26 0.03 -0.54
-0.1 -0.11 -0.09 -0.1 -0.07 0.12 0.08 0.2 0.02 0.09 0.08 -0.17
- - - - - - - - - - 2.07 2.96
- 1.01 0.68 -1.01 0.37 -0.3 0.3 -0.21 -0.03 -0.08 0.43 -1.31
- - -0.04 - 0.67 1.4 2.52 - - 0.09 - -
- - - 2.34 0.37 1.01 - - 0.31 -1.05 -0.73 0.38
- - - 2.35 0.06 1.28 -1.08 - - - 1.56 -
1.4 1.2 - - -0.44 0.93 1.72 - - 0.17 - -
- 0.45 -0.76 - -0.64 0.75 1.74 -1.29 -0.62 0.98 0.44 -
- - 0.1 2.26 -1.58 1.01 - - 1.38 - -0.13 -1.75
-0.93 0.12 -0.14 -0.49 0.41 -0.18 1.03 -0.22 0.17 -0.23 -0.43 -0.11
-0.12 -0.2 0.08 0.02 0.19 0.06 -0.1 -0.01 -0.12 0.16 0.07 -0.1
0.63 0.61 -1.6 -0.97 0.56 -0.22 0.68 -2.29 0.31 -0.26 0.67 -1.84
- - - - 2.52 - - - - - 2.64 -
- 1.41 - - - 1.15 2.29 - - - 1.15 -
- - 0.6 1.61 - 0.75 -0.58 -0.52 0.42 -1.09 1.36 -
-1.2 0.12 -1.9 0.72 0.49 0.07 0.54 -0.29 0.56 0.1 -0.4 -0.9
0.17 -0.01 -0.48 0.57 0.29 -0.26 0.66 -1.71 -0.32 -0.36 0.43 -0.3
- - 0.96 - 0.01 1.95 1.45 - - - 1.3 -
- 2.17 - 1.66 - 0.94 -0.93 - 0.16 - -0.38 -
- - - 2.42 - 1.74 - - - - 1.73 -
-0.35 -0.24 0.09 -0.17 0.31 -0.14 0.36 0.13 -0.02 -0.09 0.25 -0.36
- 0.93 0.4 -0.65 0.58 -1.22 1.97 0.37 -1.02 - - -0.95
- - - - 2.01 - 2.25 - 0.78 0.57 - -
- - - - 1.87 - 2.13 - - - 1.99 -
-1.72 0.3 0.16 0.07 0.14 0.66 0.9 -1.39 -0.22 -1.68 0.9 -1.52
- 0.39 1.62 -1.67 0.51 0.3 1.1 0.19 -2.05 -0.62 -1.1 -
- - 0.98 1.93 0.05 0.34 - 0.49 - - 1.33 -
- - - - - 0.46 1.72 - 0.65 1.24 1.42 -0.44
- - -0.4 - 0.69 1.37 0.93 0.97 - -0.58 0.78 -0.33
-0.76 0.52 -0.21 0.03 0.14 0.56 0.57 0.07 -0.22 -0.34 -0.71 -0.46
1.44 1.29 -0.27 -0.56 -0.31 0.54 0.01 -3.62 -0.83 -0.17 -1.13 -3.93
- - 1.02 - 2.52 - - - 1.62 - 0.21 -
-0.19 0.03 -0.07 0.04 -0.03 0.03 0.12 0.15 0.0 -0.15 -0.03 0.05
- - - - 1.47 - - - - 1.18 2.36 0.89
- 1.42 - 1.72 0.42 -0.61 - - 0.73 0.84 - -0.73
- - - - 1.26 -0.04 2.5 - -0.65 1.22 - -
- 1.79 -0.5 - -0.18 - 2.05 - - 0.89 -0.06 -
- - - - 2.7 - - 1.61 - - 1.29 -
- - 0.04 - -0.59 1.05 1.35 1.03 -2.09 1.18 -0.26 -1.66
-0.09 1.0 1.18 - 1.01 1.06 1.1 -2.38 -2.76 - -2.28 -
- - 0.64 2.39 -1.07 1.54 - - 0.85 - - -
- - - - 2.21 0.92 2.45 - - - - -
-0.22 0.9 -1.32 0.47 0.94 -0.54 0.66 -0.28 -0.5 -0.15 -1.98 -0.71
- 2.23 - 1.53 1.02 - - 0.42 -1.1 - -0.77 -
-0.17 0.41 -0.41 -0.1 0.2 -0.84 0.75 -0.59 0.22 -0.99 0.68 -0.4
0.23 0.02 0.01 0.03 0.06 0.05 0.09 0.0 -0.16 -0.17 -0.1 -0.12
1.72 - -2.02 -1.82 0.28 - 1.49 -0.67 -2.01 -2.19 1.03 0.01
0.55 - 0.8 0.27 0.48 - 1.41 -1.32 0.92 -1.84 -0.06 -
1.33 -0.6 0.66 0.28 0.14 0.27 0.83 -0.58 -0.92 - -0.44 -
-2.44 0.6 -0.21 0.07 1.26 0.84 0.55 0.27 -0.1 -2.69 -1.18 -
- 0.47 0.15 - 1.75 - 1.48 - -0.27 - 1.34 -
- - -0.14 - 1.53 1.4 1.27 - 0.95 - 0.28 -
-0.69 0.28 0.06 -0.41 0.96 0.53 1.51 -1.43 -2.2 -0.96 -0.44 -1.7
- - - 2.65 0.78 2.01 - - - - - -
- - 0.18 - - - 2.51 - - - 2.37 -
- - 0.06 1.48 - - 0.39 - - -0.12 2.57 -
0.37 0.48 -0.29 -0.01 -0.02 0.42 -0.22 -0.36 -0.01 0.02 0.09 -1.08
1.17 - 1.23 2.08 -0.02 - 0.0 - - - 0.26 -
-0.96 1.2 1.2 -1.05 0.03 -0.06 0.64 -0.1 0.16 -0.67 -3.23 -3.49
0.15 - 1.84 - 1.55 -0.75 1.46 -0.6 -1.36 - - -
- - 1.1 - 2.39 - - - 1.11 - 1.29 -
- - - - - 1.71 1.49 - - - 2.56 -
- - 0.97 2.33 - - - - - - 2.32 -
- 0.98 0.48 1.47 0.49 -0.86 - - - 0.06 1.52 -
- - 0.01 - - - 1.59 - - - 2.45 1.34
1.13 2.42 - - - - 1.36 - - -0.1 - -0.07
- - - - 2.83 - - - - - 2.29 -
- - - 2.48 - - 0.55 - - -0.56 1.8 -0.31

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.