Heatmap: Cluster_172 (HCCA clusters)

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(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	1 h after light	3 h after light	5 h after light	7 h after light	9 h after light	11 h after light	13 h after light	15 h after light	1 h after dark	3 h after dark	5 h after dark	7 h after dark
Pp1s100_119V6	-1.44	-1.07	-0.64	-0.22	0.2	0.25	0.18	0.35	0.38	0.5	0.27	-0.03
Pp1s100_136V6	-0.45	-0.65	-0.26	-0.16	0.04	0.1	0.25	0.33	0.29	0.02	0.1	0.05
Pp1s100_144V6	0.02	-1.14	-0.75	-0.39	0.18	-0.13	0.24	0.55	0.17	0.01	0.3	0.16
Pp1s103_103V6	-0.57	-0.69	-0.38	-0.1	0.02	0.22	0.17	0.33	0.29	0.19	0.15	-0.04
Pp1s103_29V6	-0.84	-0.35	-0.21	-0.17	0.07	0.18	0.19	0.33	0.23	0.3	0.05	-0.16
Pp1s105_212V6	0.21	-0.3	-0.34	-0.57	-0.17	-0.24	-0.34	0.13	0.25	0.16	0.25	0.54
Pp1s10_253V6	0.09	-0.46	-0.28	-0.2	-0.11	-0.01	0.03	0.11	0.18	0.17	0.12	0.21
Pp1s111_6V6	0.06	-1.37	-0.82	-1.33	-1.0	-1.23	0.58	0.59	0.03	0.47	0.61	0.81
Pp1s115_10V6	-0.52	-0.51	-0.59	-0.38	-0.41	-0.13	-0.05	0.5	0.42	0.66	0.2	0.07
Pp1s118_69V6	-0.32	-0.39	-0.27	-0.17	0.11	0.12	-0.05	0.08	0.34	0.13	0.17	0.05
Pp1s11_288V6	-0.27	-0.73	-0.51	-0.24	0.06	0.01	0.25	0.5	0.23	0.09	0.1	0.08
Pp1s126_26V6	-0.23	-0.39	-0.32	-0.38	-0.05	0.01	0.04	0.31	0.25	0.24	0.14	0.13
Pp1s127_36V6	-0.36	-0.33	-0.22	-0.33	-0.11	-0.09	0.04	0.23	0.33	0.17	0.3	0.13
Pp1s12_59V6	-0.37	-0.46	-0.37	-0.22	-0.06	-0.04	0.17	0.31	0.19	0.16	0.16	0.27
Pp1s136_114V6	0.02	-0.11	-0.14	-0.16	0.0	-0.02	0.02	0.17	0.07	0.12	0.0	-0.0
Pp1s153_170V6	-0.38	-0.53	-0.37	-0.19	0.02	0.01	0.19	0.32	0.24	0.15	0.12	0.14
Pp1s154_145V6	-0.86	-0.77	-0.25	-0.68	-0.37	-0.05	0.29	0.61	0.55	0.45	0.31	-0.25
Pp1s154_14V6	-0.25	-0.21	-0.28	-0.21	0.08	-0.01	0.17	0.11	0.2	0.22	0.03	0.02
Pp1s15_168V6	-0.42	-0.39	-0.2	-0.33	-0.19	-0.21	-0.03	0.17	0.25	0.38	0.34	0.28
Pp1s160_12V6	-4.13	-2.32	-1.32	-0.8	0.02	0.49	0.01	0.54	0.42	0.88	0.87	-0.17
Pp1s164_49V6	0.34	-1.57	-1.37	-1.23	-0.07	0.12	-0.1	0.85	0.58	0.18	0.11	0.14
Pp1s177_28V6	-0.05	-0.42	-0.42	-0.58	-0.17	0.01	0.11	0.44	0.37	0.3	0.12	-0.12
Pp1s192_66V6	0.09	-0.04	-0.2	-0.3	-0.13	-0.08	-0.04	0.14	0.11	0.23	0.18	-0.07
Pp1s192_94V6	-0.45	-0.33	-0.1	-0.26	-0.02	-0.2	-0.14	0.09	0.29	0.38	0.27	0.2
Pp1s194_104V6	0.36	-0.19	-0.57	-0.64	0.18	-0.36	-0.46	0.39	0.26	0.16	0.37	-0.05
Pp1s197_119V6	-0.15	-0.28	-0.05	-0.17	-0.08	0.09	0.06	0.12	0.15	0.15	0.12	-0.04
Pp1s197_130V6	-0.76	-0.58	-0.65	-0.44	-0.23	-0.06	0.14	0.42	0.44	0.42	0.37	0.18
Pp1s199_50V6	-	-1.94	-1.51	-3.33	-0.77	0.19	0.38	0.56	-0.88	1.3	1.31	0.39
Pp1s19_182V6	-0.19	-0.3	-0.1	-0.1	0.06	0.03	0.16	0.16	0.19	0.1	-0.04	-0.05
Pp1s19_59V6	-	-3.46	-0.43	-0.91	-1.2	-0.15	1.03	0.98	-2.96	1.11	0.91	0.17
Pp1s1_405V6	-0.21	-0.55	-0.55	-0.52	-0.21	0.04	0.15	0.46	0.33	0.21	0.19	0.19
Pp1s1_653V6	-0.28	-0.37	-0.29	-0.29	-0.08	-0.15	0.03	0.15	-0.02	0.3	0.27	0.45
Pp1s206_38V6	-0.03	-0.46	-0.27	-0.26	-0.17	-0.19	-0.1	0.12	0.47	0.23	0.2	0.18
Pp1s207_69V6	-0.55	-0.61	-0.16	-0.18	0.07	0.21	0.21	0.09	0.41	0.13	0.05	0.01
Pp1s213_49V6	-0.42	-0.42	-0.39	-0.21	-0.18	-0.14	-0.08	0.33	0.22	0.35	0.28	0.3
Pp1s213_60V6	0.23	-0.21	-0.24	0.08	-0.06	-0.21	-0.44	-0.01	-0.03	0.23	0.04	0.41
Pp1s219_28V6	-0.39	-0.44	-0.34	-0.41	-0.46	-0.27	-0.0	0.37	0.37	0.45	0.37	0.21
Pp1s220_112V6	-0.04	-0.93	-0.57	-0.93	0.04	-0.27	0.11	0.04	0.14	0.55	0.4	0.55
Pp1s226_102V6	-0.32	-0.47	-0.38	-0.18	0.01	-0.16	-0.14	0.11	0.39	0.38	0.27	0.15
Pp1s226_16V6	0.14	-0.16	-0.32	-0.36	-0.29	-0.37	-0.17	0.05	0.14	0.27	0.31	0.44
Pp1s22_257V6	-0.18	-0.53	-0.31	-0.05	0.11	-0.03	0.07	0.29	0.19	0.17	0.24	-0.19
Pp1s230_38V6	-0.2	-0.42	-0.21	-0.03	0.08	0.1	0.1	0.05	0.4	0.09	-0.08	-0.04
Pp1s240_88V6	-0.08	-0.3	-0.36	-0.26	-0.08	-0.04	0.12	0.32	0.06	0.18	0.13	0.13
Pp1s245_59V6	-0.29	-0.58	-0.24	-0.15	-0.02	0.04	0.11	0.09	0.39	0.12	0.19	0.1
Pp1s24_68V6	-0.48	-0.48	-0.21	-0.32	-0.02	0.05	0.23	0.32	0.35	0.25	0.08	-0.08
Pp1s257_26V6	-0.48	-0.45	-0.24	-0.08	0.04	0.15	0.06	0.26	0.15	0.28	0.15	-0.08
Pp1s26_74V6	-0.5	-0.71	-0.47	-1.34	-0.26	-1.12	0.16	0.44	0.36	0.44	0.71	0.6
Pp1s277_78V6	0.16	-0.44	-0.16	-0.14	-0.05	-0.03	0.06	0.31	0.02	0.03	0.03	0.07
Pp1s28_151V6	-0.04	-0.1	-0.24	-0.12	-0.1	0.04	-0.14	-0.0	0.2	0.07	0.14	0.21
Pp1s291_53V6	-0.54	-0.62	-0.37	-0.33	0.11	0.11	0.19	0.4	0.38	0.25	0.02	-0.06
Pp1s29_90V6	-0.27	-0.42	-0.32	-0.34	-0.1	-0.0	0.11	0.17	0.26	0.15	0.16	0.35
Pp1s30_238V6	-0.12	-0.13	-0.23	-0.46	-0.34	-0.33	-0.01	0.22	0.4	0.24	0.28	0.17
Pp1s31_26V6	0.08	-0.23	-0.22	-0.07	-0.02	0.02	-0.04	0.19	0.01	0.05	0.05	0.1
Pp1s322_40V6	-0.39	-0.64	-0.44	-0.04	0.18	0.2	0.12	0.05	0.37	0.07	-0.0	0.2
Pp1s324_22V6	-0.23	-0.44	-0.31	-0.15	0.1	0.16	0.09	-0.04	0.41	0.24	0.1	-0.16
Pp1s32_160V6	-0.51	-0.65	-0.47	-0.29	-0.03	0.1	0.2	0.41	0.22	0.16	0.22	0.2
Pp1s339_37V6	0.17	-0.39	-0.43	-0.49	-0.21	-0.25	-0.22	0.19	0.03	0.27	0.32	0.57
Pp1s33_333V6	-0.08	-0.23	-0.2	-0.07	0.13	0.05	-0.04	0.04	0.21	0.07	0.01	0.04
Pp1s34_170V6	-0.76	-0.29	-0.22	-0.14	0.05	-0.05	0.05	0.31	0.27	0.19	0.15	0.12
Pp1s34_56V6	-0.41	-0.32	-0.21	-0.28	-0.07	-0.1	0.06	0.48	0.33	0.15	-0.01	0.09
Pp1s35_257V6	-0.37	-0.67	-0.5	-0.28	0.03	0.17	0.1	0.33	0.13	0.29	0.37	-0.01
Pp1s35_401V6	-0.75	-0.57	-0.57	-0.35	0.01	0.08	0.43	0.36	0.27	0.36	-0.02	0.15
Pp1s371_62V6	-0.39	-0.36	-0.53	-0.78	0.21	-0.29	0.22	0.21	0.0	0.15	0.41	0.54
Pp1s389_19V6	-0.25	-0.32	-0.23	-0.42	0.12	0.03	0.11	0.04	0.42	0.21	0.13	-0.06
Pp1s3_199V6	-0.19	-0.21	-0.33	-0.35	-0.2	-0.09	0.11	0.27	0.27	0.29	0.11	0.1
Pp1s404_1V6	-0.12	-0.47	-0.45	-0.37	-0.14	-0.1	0.18	0.51	0.17	0.25	0.16	0.02
Pp1s434_27V6	-0.93	-0.77	-0.42	-0.36	-0.15	0.04	0.26	0.31	0.23	0.41	0.35	0.27
Pp1s442_10V6	-0.43	-0.71	-0.25	-0.35	-0.26	-0.33	-0.03	0.45	0.43	0.4	0.27	0.23
Pp1s46_64V6	-0.28	-0.47	-0.12	-0.2	-0.05	0.07	0.22	0.41	0.16	0.16	-0.02	-0.1
Pp1s47_20V6	-0.08	-0.37	-0.32	-0.17	-0.06	-0.01	0.07	0.31	0.1	0.05	0.12	0.21
Pp1s4_307V6	-1.56	-3.79	-2.37	-2.07	0.92	0.23	0.56	0.93	-0.32	0.74	0.67	-0.64
Pp1s53_178V6	0.38	-0.69	-0.36	-0.34	-0.35	-0.14	0.26	0.49	0.05	0.39	-0.07	-0.14
Pp1s53_204V6	-0.11	-0.62	-0.37	-0.22	-0.12	-0.02	-0.26	0.07	0.33	0.22	0.41	0.32
Pp1s54_54V6	-0.15	-0.59	-0.51	-0.35	0.07	0.03	-0.16	0.23	-0.18	-0.1	0.34	0.79
Pp1s55_98V6	-0.36	-0.37	-0.35	-0.08	0.02	0.18	0.0	0.23	0.22	0.13	0.16	0.04
Pp1s56_136V6	-0.48	-1.63	-1.48	-0.58	0.19	0.41	0.18	-0.14	0.73	0.63	0.2	0.1
Pp1s56_265V6	-0.13	-0.71	-0.66	-0.71	0.16	0.28	0.63	0.72	0.28	0.2	-0.3	-0.94
Pp1s58_224V6	0.23	-0.5	-0.65	-0.74	0.15	0.05	0.17	0.5	0.12	0.1	-0.05	0.08
Pp1s59_167V6	-0.23	-0.32	-0.21	-0.2	0.04	-0.09	0.13	0.26	0.26	0.2	0.07	-0.06
Pp1s59_223V6	-2.59	-1.95	-1.23	-1.18	0.57	-0.03	0.42	0.8	-0.2	0.41	0.89	0.15
Pp1s59_267V6	0.2	-0.93	-0.8	-0.61	0.31	0.18	0.04	0.16	0.12	0.37	0.26	-0.01
Pp1s60_274V6	-0.16	-0.5	-0.32	-0.44	-0.04	-0.12	-0.12	0.14	0.18	0.41	0.28	0.33
Pp1s60_308V6	-0.18	-0.36	-0.18	-0.02	0.09	-0.08	0.02	0.26	0.1	0.2	-0.06	0.1
Pp1s61_230V6	-	-	-2.22	-0.35	0.53	0.47	0.14	1.14	-0.29	0.99	0.42	-0.47
Pp1s62_161V6	-0.32	-0.77	-0.46	-0.39	-0.02	0.04	0.29	0.77	0.57	0.03	-0.31	-0.2
Pp1s68_202V6	-0.24	-0.38	-0.38	-0.46	-0.07	-0.17	-0.01	-0.09	0.29	0.57	0.41	0.14
Pp1s70_182V6	-1.31	-1.23	-0.43	0.2	0.13	0.38	0.42	0.36	0.12	0.28	0.17	-0.26
Pp1s72_298V6	-0.33	-0.69	-0.76	-0.6	0.06	-0.05	-0.22	0.45	0.34	0.3	0.57	0.17
Pp1s77_228V6	-2.46	-2.12	-0.94	-0.34	-0.46	0.32	0.2	0.85	-0.03	0.14	0.66	0.76
Pp1s77_230V6	-1.92	-0.76	-0.13	-1.99	-1.2	0.1	0.07	0.9	0.26	0.67	0.72	0.14
Pp1s78_27V6	-0.04	-0.33	-0.25	-0.04	0.02	0.05	-0.02	0.26	0.46	-0.01	-0.12	-0.16
Pp1s79_249V6	-0.56	-0.58	-0.29	-0.12	0.19	0.1	0.29	0.17	0.23	0.18	0.08	-0.01
Pp1s79_272V6	-0.09	-0.22	-0.1	-0.29	-0.14	0.01	-0.14	0.15	0.09	0.26	0.17	0.18
Pp1s98_147V6	-0.05	-0.42	-0.22	-0.56	-0.56	-0.03	0.0	0.47	0.38	0.4	0.18	-0.06
Pp1s98_250V6	-1.06	-0.73	-0.39	-0.54	-0.33	-0.17	0.23	0.47	0.37	0.49	0.49	0.16
Pp1s9_74V6	-0.08	-0.6	-0.91	-1.04	-0.07	-0.11	-0.36	0.24	0.55	0.47	0.35	0.49

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.