Heatmap: Cluster_31 (HCCA clusters)

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(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	1 h after light	3 h after light	5 h after light	7 h after light	9 h after light	11 h after light	13 h after light	15 h after light	1 h after dark	3 h after dark	5 h after dark	7 h after dark
Pp1s101_57V6	-0.52	0.23	-1.1	-0.47	-0.43	-2.06	-0.29	-0.89	-0.25	-0.23	-0.33	2.04
Pp1s104_181V6	-	-	1.49	-	-0.29	-	-	-	-0.16	-	-0.05	2.7
Pp1s109_216V6	1.21	-	-	0.25	-1.11	-	-1.09	-0.51	-	-0.01	-	2.55
Pp1s118_164V6	-0.2	-2.56	0.83	0.35	-1.39	-1.07	0.62	-0.48	-1.71	-1.47	-0.54	1.78
Pp1s11_255V6	-	-	0.18	-	-	-	-	-	-	-	-	3.44
Pp1s11_336V6	-0.47	-	-0.08	-	-1.2	0.04	0.52	-	-1.22	0.33	-1.8	2.45
Pp1s120_63V6	-	-	0.4	0.92	-	0.54	-0.02	-1.98	-0.35	-0.25	-1.88	2.07
Pp1s127_69V6	-1.15	0.08	-0.7	-	-0.28	-	-	0.14	-0.34	-	0.26	2.58
Pp1s128_41V6	-	-	-	-	-1.28	-	1.17	-	0.25	-1.48	-	2.96
Pp1s13_158V6	-1.02	0.14	-0.57	-0.92	-0.01	-0.18	-0.16	-	-0.45	0.48	0.7	1.42
Pp1s143_120V6	-	-0.39	-0.45	-	-1.77	-1.27	-	-	-	1.04	-	2.95
Pp1s149_282V6	1.89	-	-	-0.5	-	-	-	-	-	-0.51	-	2.78
Pp1s14_441V6	-	-	-	-	-	-	-	-0.19	-	-	-0.09	3.35
Pp1s168_51V6	-0.17	-	0.18	-0.48	-	0.54	0.5	-	0.56	-	0.08	1.95
Pp1s174_39V6	-1.85	-0.12	-0.57	-	-0.21	0.19	-	0.12	-0.47	-0.1	-0.6	2.24
Pp1s175_132V6	2.38	-0.07	-0.52	-	-	-	-	-	-	-	-	2.36
Pp1s177_29V6	-	-	-0.54	-	-	-0.19	-1.64	0.05	-1.38	0.47	-	2.87
Pp1s182_88V6	-	-	1.26	-	-0.85	-	-	1.31	-	-	0.05	2.47
Pp1s188_117V6	-0.34	-1.11	-0.37	-0.25	-1.37	-0.52	-0.61	-2.04	-	0.01	-0.51	2.44
Pp1s191_73V6	0.55	-	-2.26	0.48	-0.22	-1.25	-	-	-2.24	1.05	-1.08	2.29
Pp1s194_7V6	0.01	-0.67	-1.92	-	0.38	-2.48	-0.52	-2.32	-1.5	-0.67	1.27	2.12
Pp1s1_553V6	-	-0.06	-	-	-	-	-	-	0.48	-	1.15	2.89
Pp1s202_84V6	-	-	-1.62	-	-	-	-	-0.85	1.03	-1.49	-1.03	3.04
Pp1s208_15V6	0.86	-	-0.48	0.14	-	-0.04	-	1.16	-	-	-	2.37
Pp1s210_80V6	0.94	-0.94	-0.24	-2.06	-1.35	-0.06	-0.78	-0.45	0.06	1.0	-	1.47
Pp1s211_38V6	-	-0.41	-0.86	-	0.79	-0.67	-	-	-	-	-	3.06
Pp1s21_143V6	1.67	-	-0.38	-0.92	-1.06	-	-	-0.73	-0.11	-	-0.63	2.28
Pp1s21_160V6	-	-	-	-	0.35	-	0.22	0.68	-	-	-	2.99
Pp1s22_115V6	-	-	-2.89	-	-	1.22	-0.5	-2.29	-1.03	0.23	-	2.8
Pp1s22_90V6	-	-	-	-	-	-	-	-	-	-	-	3.58
Pp1s245_83V6	-0.99	-	-2.34	-0.39	-	-	-	-	0.4	-0.89	-	3.12
Pp1s256_64V6	-	-	-	-	-	-	-	-	-	-	-	3.58
Pp1s260_46V6	1.53	-	-	-	-	-	-	-	-	-	-	3.19
Pp1s264_70V6	-	-	-	-1.7	-	-	-	-	-0.88	-0.4	-	3.38
Pp1s26_241V6	-	-	-	-	-	-	-	-	-	-	-	3.58
Pp1s27_99V6	-	-	0.14	-	-	-	-	-	-0.65	-	-	3.36
Pp1s289_4V6	0.11	-0.15	-0.21	-0.11	0.08	-0.37	-0.25	-0.49	-0.27	0.15	0.24	0.79
Pp1s28_144V6	-0.31	-0.83	-0.71	-0.8	-0.46	-1.36	-0.72	-0.45	-0.86	0.41	0.59	1.86
Pp1s295_52V6	-	0.25	-	0.42	-0.84	-	-	-2.15	-2.47	0.05	0.5	2.6
Pp1s2_571V6	0.21	-0.38	0.24	-0.6	-0.74	-1.45	-0.0	0.54	-0.75	-0.65	0.32	1.23
Pp1s2_783V6	0.93	-1.66	0.54	-0.98	-0.57	-	-2.18	-0.77	-	-2.24	-0.63	2.45
Pp1s31_109V6	1.13	0.01	0.56	-	-2.11	-1.03	-1.36	-2.75	-0.14	-3.23	-0.62	2.14
Pp1s31_226V6	-	-	-	-	-	-	-	-	-	-	-	3.58
Pp1s31_61V6	-	-	-1.47	-	-	-	-	-	-	-	-	3.54
Pp1s338_64V6	-	-	-	-	0.38	-	-	-	-	-	-	3.42
Pp1s33_312V6	1.33	-	-1.11	-1.44	-0.65	-0.18	-2.31	-0.58	0.01	-0.11	-0.04	1.75
Pp1s34_322V6	-	0.5	-0.08	-	0.26	-	-0.75	-	0.44	-1.0	-	2.58
Pp1s350_35V6	-	-	-	0.81	0.71	-	-0.78	-0.32	0.01	-	-	2.64
Pp1s35_155V6	0.98	0.59	-0.24	-3.44	0.34	-1.12	-0.25	-3.29	-4.06	0.21	-0.21	1.5
Pp1s36_233V6	-	-2.2	0.57	0.17	0.07	0.16	0.17	-2.01	-	-2.69	0.29	2.09
Pp1s36_361V6	-	-	-	-	-	-	-	1.14	-	-	0.97	2.97
Pp1s379_19V6	-	0.03	0.81	-0.29	-0.03	-2.5	0.44	-0.81	-2.93	0.43	-0.14	1.55
Pp1s38_16V6	-1.55	-	-1.85	-	0.14	-0.82	-1.48	-	0.62	1.13	1.15	1.77
Pp1s391_62V6	-0.05	-	-0.67	-0.43	-0.16	-0.95	-0.21	0.85	-1.55	-2.54	-0.81	2.17
Pp1s3_349V6	-	-	-	-	-1.22	-	-2.37	0.97	-2.29	-	-1.81	3.16
Pp1s3_547V6	-	-	-	-	-	-	-	-	-	-	-	3.58
Pp1s401_24V6	2.6	-	-0.17	-2.13	-1.26	-	-0.13	-	-0.42	-1.51	-	1.27
Pp1s401_28V6	-1.32	-1.18	-0.8	-0.49	-0.76	-0.58	-0.32	-0.36	0.59	0.75	0.81	1.07
Pp1s423_30V6	-	-0.74	-2.44	-	-	0.18	-2.0	-	-2.16	-0.24	-	3.13
Pp1s426_17V6	0.23	0.09	-0.04	-3.17	-0.11	-2.82	0.39	-0.83	-0.64	0.29	-0.28	1.61
Pp1s44_20V6	-0.64	-0.06	-1.74	-1.37	-0.73	-1.54	-0.67	-	-1.73	0.01	-1.4	2.69
Pp1s468_19V6	-2.2	0.38	-0.89	0.04	-0.11	-0.64	-0.5	0.13	-0.15	0.46	-0.86	1.44
Pp1s46_210V6	-	-0.53	-	-	-	-	-	0.89	-0.39	-	-0.37	2.98
Pp1s49_64V6	-0.6	-	-0.86	-	0.4	-	-1.76	-0.3	0.65	-0.85	-	2.64
Pp1s50_60V6	-	-	-	-0.27	0.43	-	0.79	-	-0.4	-	-0.16	2.69
Pp1s511_6V6	-	-	-	-	-	-	-	-	-	-	-	3.58
Pp1s54_316V6	-0.76	-	0.63	-0.68	-0.78	0.27	-0.09	0.6	-0.5	-2.0	-0.27	1.68
Pp1s59_183V6	-0.84	0.24	0.08	-0.39	0.3	-0.38	-0.11	-1.2	-0.34	-0.73	-0.51	1.58
Pp1s59_90V6	-	-	0.48	-	-	0.42	-1.42	-	0.11	0.59	-	2.66
Pp1s61_109V6	-	-	-	-	-	-	1.31	-	-0.46	0.4	-0.13	2.71
Pp1s61_154V6	-	-	-	-	-0.38	-	-	-	-	-	-	3.49
Pp1s6_434V6	-	-	-	-	-	-	-	-	-	-	-	3.58
Pp1s6_69V6	1.12	0.55	-0.59	-0.44	-0.05	-1.74	-1.55	0.13	-1.1	-2.08	-0.82	1.58
Pp1s75_224V6	-	-	-	-	-	-	-	-	-	-	-	3.58
Pp1s7_188V6	0.5	-1.95	-1.72	-2.74	-0.28	-0.36	-0.37	-3.43	0.56	0.12	-0.29	2.01
Pp1s7_282V6	-	-	-0.04	0.07	0.94	-	-0.62	-	-1.86	-0.01	0.54	2.23
Pp1s7_379V6	-	0.86	0.0	-1.43	-0.15	-3.57	-1.83	-0.04	-0.32	0.67	0.57	1.43
Pp1s81_247V6	-2.85	-0.67	-0.17	0.02	0.33	-0.92	-0.33	0.16	-0.06	0.08	0.14	1.33
Pp1s85_176V6	-	-	-	-	-	-	-	-	-	-0.08	-	3.47
Pp1s97_37V6	-0.23	-0.56	-0.26	-2.78	-2.82	0.84	-0.41	-0.57	-0.81	-1.49	-	2.38

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.