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Heatmap: Cluster_24 (HCCA clusters)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
1 h after light
3 h after light
5 h after light
7 h after light
9 h after light
11 h after light
1 h after dark
3 h after dark
5 h after dark
7 h after dark
9 h after dark
11 h after dark
-1.36 -0.62 -0.64 -0.64 1.1 1.74 0.79 -0.56 -0.58 -1.06 -1.51 -1.71
-0.56 -0.91 -0.73 0.24 1.27 1.69 0.51 -1.41 -0.74 -1.26 -1.69 -2.1
-0.71 -0.26 -0.42 0.04 1.15 1.45 0.37 -1.08 -0.48 -0.83 -1.32 -1.39
-2.78 -0.3 0.03 0.11 1.65 1.9 0.5 -2.96 -2.43 -3.01 -3.24 -3.2
-0.56 -0.32 -0.53 -0.2 1.24 1.69 0.67 -0.94 -1.2 -1.45 -2.19 -2.14
-1.04 -0.39 -0.8 -0.3 1.3 1.89 0.8 -1.53 -1.19 -1.75 -2.61 -2.25
-4.89 -2.56 -2.66 -1.15 2.05 2.3 0.82 -2.94 -2.96 -4.21 -5.16 -6.36
-0.71 -0.28 -0.34 0.04 1.09 1.3 0.54 -0.46 -0.57 -0.99 -1.42 -1.24
-2.12 -1.66 -1.78 -0.73 1.92 2.02 0.77 -2.03 -1.76 -2.27 -2.93 -2.93
-1.77 -0.94 -0.54 0.15 1.47 1.69 0.5 -1.53 -1.13 -1.23 -1.52 -1.31
-0.35 -0.01 -0.26 0.01 1.37 1.6 0.44 -1.6 -1.42 -1.78 -2.34 -2.34
-1.09 -0.65 -0.61 -0.07 1.5 1.76 0.54 -1.61 -1.26 -1.52 -1.88 -1.98
0.29 -0.04 -0.5 -0.07 1.17 1.41 0.25 -1.42 -0.98 -1.24 -1.55 -1.37
-0.2 -0.23 -0.64 -0.24 0.93 1.18 0.36 -0.65 -0.46 -0.45 -0.91 -0.49
-0.35 -0.58 -1.04 -0.63 1.67 1.95 0.39 -2.39 -2.12 -2.51 -2.38 -1.95
-2.53 -1.81 -1.85 -1.12 1.54 2.17 0.95 -1.59 -1.16 -1.8 -2.4 -2.3
-0.59 -0.62 -0.93 -0.38 1.04 1.31 0.31 -0.69 -0.21 -0.22 -0.75 -0.55
0.08 -0.13 -0.25 0.01 0.94 1.23 0.13 -0.84 -0.48 -0.79 -1.07 -1.01
-0.86 -1.02 -1.57 -1.05 1.41 1.86 0.74 -1.31 -0.94 -1.26 -1.38 -1.18
-4.34 -3.0 -2.79 -1.52 1.98 2.25 0.85 -2.41 -1.99 -2.82 -3.43 -2.95
-6.49 -1.4 -1.74 -0.68 2.05 2.2 0.73 -3.16 -3.53 -5.23 -6.93 -4.62
-6.19 -2.74 -2.81 -1.16 2.12 2.29 0.77 -4.2 -3.19 -4.53 -4.29 -4.54
-3.72 -3.13 -3.6 -2.18 1.37 2.05 0.96 -0.84 -0.47 -0.97 -1.01 -0.84
-1.45 -1.04 -0.49 -0.22 1.06 1.53 0.41 -0.45 -0.4 -0.78 -0.62 -0.89
-1.81 -1.51 -1.31 -0.89 1.62 1.7 0.85 -0.9 -0.74 -1.46 -1.4 -1.28
-1.41 -1.14 -0.42 0.08 1.55 1.76 0.34 -1.84 -1.77 -1.89 -1.44 -0.8
-0.18 0.01 -0.48 0.13 0.85 1.16 0.28 -0.83 -0.15 -0.55 -1.2 -1.08
-0.47 -0.12 -0.36 -0.11 0.74 1.04 0.14 -0.61 -0.27 -0.2 -0.47 -0.41
-1.2 -1.01 -0.88 -0.22 1.83 2.01 0.57 -2.86 -2.4 -3.16 -3.21 -4.29
-1.65 -0.83 -1.09 -0.14 1.7 1.9 0.64 -2.49 -1.67 -1.73 -2.4 -2.21
-1.28 -1.17 -1.15 -0.23 1.4 1.75 0.57 -1.01 -0.6 -1.02 -1.39 -1.54
-0.39 -0.68 -1.2 -0.47 1.54 1.84 0.4 -1.55 -1.37 -1.54 -1.88 -1.68
-1.3 -0.94 -1.66 -0.95 1.79 2.09 0.83 -3.13 -2.2 -2.67 -3.15 -2.85
-1.93 -1.31 -1.56 -0.69 1.47 1.89 0.7 -1.26 -0.78 -0.97 -1.42 -1.42
-1.19 -0.53 -0.7 -0.61 1.37 1.61 0.5 -1.54 -1.01 -0.67 -0.99 -0.77
-2.5 -1.91 -2.12 -0.53 1.91 2.18 0.93 -3.51 -2.46 -3.47 -4.22 -4.44
-0.49 -0.75 -0.95 -0.33 1.57 1.82 0.72 -1.09 -1.59 -2.6 -3.08 -2.68
-0.04 0.03 -0.06 0.46 1.0 1.47 0.42 -1.79 -1.33 -1.6 -1.96 -1.76
-0.71 -0.26 -0.6 -0.07 1.29 1.64 0.6 -1.77 -0.93 -1.27 -1.64 -1.72
-0.67 -0.17 -0.25 0.09 1.03 1.34 0.42 -1.03 -0.76 -0.83 -1.07 -0.87
-0.8 -0.54 -0.71 -0.14 1.08 1.37 0.46 -0.97 -0.39 -0.48 -0.98 -0.6
-3.59 -2.96 -3.04 -1.72 1.74 2.4 1.08 -3.13 -1.94 -2.89 -3.84 -4.01
-4.5 -2.27 -2.26 -0.71 1.99 2.2 0.97 -3.61 -2.63 -3.78 -5.11 -4.29
-3.53 -2.31 -2.08 -0.96 2.0 2.17 0.94 -3.04 -2.67 -3.32 -3.62 -3.51
-0.19 -0.38 -1.18 -0.6 1.44 1.77 0.6 -2.04 -1.37 -1.44 -1.9 -1.52
-0.44 0.0 -0.2 0.22 1.55 1.64 0.39 -2.5 -1.89 -2.96 -2.95 -2.57
-3.5 -2.16 -0.99 -0.33 1.37 1.83 0.46 -1.53 -0.62 -0.7 -0.75 -0.61
-0.81 -0.73 -0.67 -0.11 1.53 1.59 0.46 -1.08 -1.07 -1.38 -1.62 -1.66
-0.43 0.14 0.2 0.49 1.3 1.52 0.25 -1.83 -2.12 -2.07 -2.63 -2.46
-0.67 -0.49 -0.45 0.18 1.34 1.58 0.33 -1.58 -1.11 -1.16 -1.45 -1.25
-0.82 -0.65 -1.24 -0.61 1.38 1.88 0.8 -1.9 -1.25 -1.37 -1.82 -1.5
-0.8 -0.38 -0.48 -0.51 1.07 1.36 0.43 -0.54 -0.72 -0.86 -0.45 -0.62
-2.6 -1.09 -1.49 -0.6 1.7 1.92 0.64 -1.2 -1.39 -1.45 -1.93 -1.67
-3.02 -0.94 -1.21 -0.25 1.96 2.08 0.78 -4.05 -3.63 -4.32 -5.43 -5.4
-0.27 -0.27 -0.55 -0.05 0.77 1.02 0.42 -0.66 -0.32 -0.33 -0.6 -0.47
-1.61 -0.67 -0.97 -0.71 0.9 1.41 0.51 -0.25 0.08 -0.19 -0.81 -0.66
-2.85 -2.2 -2.44 -1.3 1.82 2.25 0.92 -3.2 -1.44 -2.94 -2.81 -2.95
0.06 -0.2 -0.11 0.19 0.88 0.95 0.09 -0.74 -0.53 -0.8 -0.75 -0.48
-1.54 0.03 0.1 0.27 1.13 1.4 0.44 -0.91 -0.97 -1.22 -1.44 -1.52
-0.62 -0.57 -0.87 -0.28 1.52 1.7 0.58 -1.8 -1.15 -1.45 -1.84 -1.71
-5.62 -2.63 -2.74 -1.03 1.94 2.23 0.93 -1.89 -2.16 -3.16 -3.83 -4.0
-2.03 -0.51 -0.12 0.53 1.35 1.44 0.24 -1.11 -0.68 -1.12 -1.41 -1.62
-1.02 -1.38 -1.8 -0.76 1.2 1.84 0.73 -1.04 -0.33 -0.71 -1.16 -1.38
-2.02 -1.98 -1.67 -0.33 1.34 1.63 0.71 -0.3 -0.11 -0.51 -1.71 -1.49
-0.75 -0.64 -0.9 -0.13 1.46 1.75 0.5 -1.7 -1.04 -1.26 -1.82 -1.79
-1.83 -1.16 -0.97 0.0 1.71 1.78 0.64 -1.9 -1.49 -1.84 -1.9 -1.61
-1.52 -0.99 -1.61 -0.51 1.61 1.96 0.65 -2.22 -1.02 -1.51 -1.92 -1.96
-1.91 -1.24 -1.2 -0.5 1.73 1.78 0.38 -1.35 -0.78 -0.84 -1.6 -2.05
-0.91 -0.73 -0.11 0.05 1.13 1.33 0.12 -0.82 -0.76 -0.82 -0.47 -0.57
-1.23 -0.17 -0.18 -0.1 0.89 1.26 0.3 -0.78 -0.34 -0.41 -0.75 -0.59
-1.5 -1.27 -1.89 -1.38 1.74 2.14 0.9 -2.29 -1.54 -2.37 -3.31 -2.9
-1.56 -0.96 -0.79 -0.47 1.01 1.55 0.85 -0.02 -0.28 -0.84 -1.19 -1.73
-1.33 -1.04 -0.66 -0.42 1.04 1.6 0.57 -0.94 -0.57 -0.69 -0.8 -0.36
-2.1 -0.94 -1.18 -0.56 1.58 1.89 0.71 -1.42 -1.28 -1.68 -1.67 -1.37
-4.88 -2.33 -2.64 -0.97 1.94 2.26 0.99 -3.31 -2.78 -3.41 -4.17 -3.66
-0.44 -0.36 -0.42 0.07 0.86 0.99 0.1 -0.6 -0.11 -0.24 -0.6 -0.52
-4.21 -2.67 -3.17 -1.48 2.07 2.32 0.79 -3.59 -3.27 -3.64 -4.13 -3.44
-1.72 -1.65 -1.91 -0.87 1.81 2.19 0.76 -2.43 -1.94 -2.9 -2.97 -3.02
-0.97 -0.78 -0.44 -0.21 1.42 1.69 0.29 -1.63 -0.87 -1.14 -1.08 -1.44

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.