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Heatmap: Cluster_11 (HCCA clusters)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
1 h after light
3 h after light
5 h after light
7 h after light
9 h after light
11 h after light
1 h after dark
3 h after dark
5 h after dark
7 h after dark
9 h after dark
11 h after dark
1.21 0.46 -0.02 -0.18 -0.39 -0.24 -0.28 -0.23 -0.26 -0.42 -0.47 -0.24
1.66 0.5 -0.65 -0.54 -0.34 0.14 -0.69 -0.96 -0.41 -0.24 -0.4 -0.48
1.96 0.65 -0.81 -1.07 -1.08 -0.56 -1.45 -1.06 -0.52 -0.22 0.09 -0.17
1.52 0.68 -0.07 -0.61 -0.54 -0.58 -1.11 -0.49 -0.33 -0.15 -0.09 -0.42
1.52 0.59 -0.42 -0.38 -0.82 -0.5 -0.97 -0.84 -0.18 0.01 -0.04 -0.13
1.76 0.69 -0.67 -1.1 -0.72 0.02 -0.99 -1.54 -0.47 -0.06 0.01 -0.42
0.89 0.16 -0.33 -0.4 -0.22 -0.22 -0.35 -0.13 -0.05 -0.06 0.06 0.12
2.83 1.17 -1.73 -2.43 -1.56 -0.39 -1.87 -3.61 -2.67 -2.2 -2.55 -2.66
1.24 0.41 -0.44 -0.55 -0.26 0.13 -0.47 -0.57 -0.25 -0.07 -0.08 -0.3
2.11 0.85 -0.09 -0.5 -0.57 -0.44 -1.6 -1.49 -1.36 -1.07 -0.55 -0.79
1.3 0.43 -1.05 -1.03 -0.72 0.06 -0.44 -0.75 -0.07 0.14 0.04 0.21
1.15 0.42 -0.35 -0.86 -0.29 0.1 -0.58 -0.32 -0.23 -0.06 0.16 -0.28
1.67 0.71 -0.52 -0.62 -1.0 -0.41 -1.3 -1.52 -0.37 0.07 0.01 -0.0
2.68 1.43 -0.66 -1.26 -1.39 -1.43 -2.29 -3.0 -2.94 -2.61 -2.28 -1.87
2.87 1.32 -1.19 -1.78 -2.84 -1.86 -3.6 -6.06 -3.32 -2.29 -1.39 -1.82
1.43 0.21 -0.24 -0.6 -0.42 -0.04 -0.57 -0.43 -0.3 -0.26 0.14 -0.38
1.55 0.63 -0.33 -0.87 -0.91 -0.53 -1.15 -0.84 -0.35 -0.09 0.14 0.15
1.56 0.53 -0.57 -0.63 -0.39 0.11 -0.36 -0.5 -0.3 -0.55 -0.38 -0.56
2.0 0.92 -0.7 -1.29 -0.68 -0.27 -0.87 -0.97 -1.09 -0.65 -0.19 -0.75
1.22 0.23 -0.19 -0.28 -0.26 -0.15 -0.41 -0.29 -0.25 -0.34 0.03 -0.24
1.51 0.4 -0.89 -1.19 -1.04 -0.57 -0.6 -0.19 -0.16 -0.06 0.2 0.21
0.96 0.13 -0.3 -0.38 -0.25 -0.01 -0.74 -0.28 -0.1 0.02 0.19 0.05
1.86 0.74 -0.76 -0.87 -0.57 -0.04 -1.44 -2.11 -0.62 -0.07 -0.09 -0.4
1.45 0.53 -0.54 -0.32 -0.37 -0.11 -0.85 -1.22 -0.28 -0.03 -0.23 -0.0
2.05 1.02 -0.32 -0.4 -0.82 -0.49 -1.53 -2.49 -1.15 -0.78 -0.53 -0.44
1.94 0.72 -0.59 -0.68 -0.81 -0.31 -1.25 -1.52 -0.66 -0.37 -0.08 -0.46
2.18 0.97 -0.7 -0.83 -1.17 -0.8 -1.79 -1.83 -0.7 -0.52 -0.56 -0.43
2.12 0.67 -0.77 -0.68 -0.56 0.11 -0.93 -1.27 -1.0 -0.83 -0.75 -0.97
2.11 1.0 -0.9 -0.81 -1.39 -0.46 -1.2 -2.18 -0.76 -0.27 -0.45 -0.6
1.4 0.83 -0.07 -0.43 -0.86 -0.54 -0.93 -0.82 -0.36 -0.1 -0.17 -0.06
1.55 0.53 -0.7 -0.93 -0.96 -0.52 -1.13 -0.87 -0.24 0.13 0.28 0.17
2.87 1.36 -1.62 -2.42 -3.22 -2.37 -3.37 -3.83 -2.42 -1.63 -1.58 -1.85
2.11 0.7 -0.54 -0.35 -0.53 -0.43 -0.85 -0.97 -0.84 -0.89 -0.92 -1.15
1.9 0.57 -0.72 -0.88 -1.36 -1.03 -1.04 -0.83 -0.17 -0.07 -0.29 0.06
2.55 1.12 -1.14 -1.8 -1.9 -1.52 -2.13 -1.83 -1.18 -0.85 -0.93 -0.73
1.47 0.25 -0.47 -0.38 -0.19 0.01 -0.51 -0.49 -0.46 -0.4 -0.25 -0.12
2.79 1.25 -0.96 -1.11 -1.13 -0.84 -2.03 -2.97 -2.86 -3.58 -3.5 -4.31
2.97 1.48 -2.56 -3.0 -2.73 -1.84 -2.8 -4.54 -4.36 -3.8 -2.85 -2.18
1.49 0.46 -0.68 -0.82 -0.65 -0.25 -0.55 -0.62 -0.34 -0.29 0.11 0.17
2.46 1.11 -0.71 -1.01 -1.23 -0.77 -2.14 -2.59 -1.41 -1.06 -0.95 -1.15
1.89 0.83 -0.27 -0.32 -0.43 -0.53 -0.54 -1.41 -1.08 -0.65 -0.74 -0.6
2.79 1.25 -1.31 -1.37 -0.53 -0.3 -1.77 -5.89 -6.16 -5.38 -5.31 -5.09
0.87 0.25 -0.3 -0.39 -0.4 -0.1 -0.75 -0.46 -0.02 0.08 0.36 0.09
1.97 0.9 -0.77 -0.89 -1.21 -0.58 -1.02 -1.57 -0.54 -0.25 -0.42 -0.17
1.53 0.54 -0.47 -0.24 -0.68 0.01 -1.01 -2.04 -0.57 0.05 0.25 -0.28
1.4 0.72 0.03 -0.44 -0.54 -0.43 -1.18 -0.74 -0.42 -0.21 -0.1 -0.08
2.89 1.33 -2.9 -3.88 -4.59 -3.36 -4.4 -5.38 -2.63 -1.12 -0.96 -0.99
1.84 0.93 -0.34 -0.88 -1.05 -0.64 -1.42 -1.32 -0.54 -0.2 -0.22 -0.19
2.3 1.21 -0.1 -1.47 -1.62 -1.59 -2.97 -2.45 -1.44 -0.58 -0.22 -0.77
1.5 0.57 -0.48 -0.34 -0.51 -0.22 -0.58 -0.61 -0.22 -0.16 -0.4 -0.33
1.66 0.91 0.09 -0.52 -0.77 -0.69 -1.39 -1.09 -0.6 -0.25 -0.25 -0.3
3.1 1.28 -3.06 -3.74 -3.95 -3.19 -4.48 -6.21 -4.16 -2.89 -2.43 -2.26
1.64 0.66 -0.41 -0.26 -0.79 -0.63 -0.97 -0.96 -0.38 -0.18 -0.29 -0.01
1.81 0.67 -0.38 -0.51 -0.68 -0.24 -0.26 -0.52 -0.82 -0.78 -0.4 -0.93
1.35 0.33 -0.9 -1.02 -0.89 -0.34 -0.78 -0.34 0.04 0.15 0.23 0.2
2.63 0.89 -1.45 -1.08 -0.92 -1.14 -2.71 -3.24 -2.3 -1.62 -0.8 -0.38
1.89 0.59 -0.52 -0.68 -0.61 -0.4 -1.2 -1.0 -0.65 -0.44 -0.15 -0.27
2.7 1.35 -1.05 -2.51 -2.72 -1.51 -2.31 -2.31 -1.72 -1.22 -1.45 -1.76
1.27 0.38 -0.47 -0.36 -0.29 0.03 -0.43 -0.49 -0.17 -0.13 -0.1 -0.38
2.43 1.16 -0.66 -1.13 -0.72 -0.24 -1.58 -3.36 -2.0 -1.78 -1.07 -1.39
1.72 0.66 -0.48 -0.4 -0.43 -0.06 -0.83 -0.9 -0.45 -0.42 -0.53 -0.55
1.13 0.3 -0.45 -0.37 -0.39 -0.15 -0.46 -0.39 -0.08 -0.04 -0.01 -0.01
1.15 0.36 -0.24 -0.27 -0.55 -0.32 -0.68 -0.54 -0.07 0.01 -0.01 0.12
2.88 1.41 -1.23 -1.98 -3.09 -2.56 -3.66 -5.16 -3.37 -2.37 -1.74 -1.67
2.2 0.97 -0.9 -0.54 -1.47 -1.06 -1.72 -1.89 -0.76 -0.54 -0.44 -0.33
1.03 0.39 -0.13 -0.36 -0.54 -0.27 -0.57 -0.24 -0.09 0.08 0.11 -0.25
1.3 0.64 0.0 -0.34 -0.29 -0.2 -1.09 -0.7 -0.36 -0.16 -0.06 -0.38
2.13 0.66 -1.28 -1.27 -0.75 0.18 -1.12 -1.84 -0.72 -0.33 -0.31 -0.85
1.91 1.09 0.04 -0.56 -0.78 -0.82 -2.02 -2.0 -0.99 -0.28 -0.48 -0.48
1.89 0.58 -1.95 -1.63 -0.66 0.47 -0.82 -2.68 -0.5 0.14 -0.08 -0.44
2.09 1.0 -0.39 -0.88 -1.19 -0.86 -1.81 -1.78 -0.62 -0.31 -0.51 -0.47
1.71 0.37 -1.51 -1.21 -1.02 0.37 -0.62 -1.94 -0.6 -0.2 0.29 0.27
1.47 0.45 -0.15 -0.22 -0.75 -0.54 -0.67 -0.39 -0.34 -0.41 -0.26 0.07
1.16 0.26 -0.47 -0.41 -0.45 -0.16 -0.99 -0.51 -0.0 0.09 0.24 0.0
1.71 0.91 -0.34 -1.19 -0.85 -0.2 -1.25 -1.0 -0.33 -0.14 -0.2 -0.51
2.69 1.36 -1.21 -1.73 -3.15 -1.82 -2.83 -4.12 -2.79 -1.98 -1.13 -0.32
1.77 0.96 -0.43 -0.69 -1.28 -0.61 -1.42 -1.73 -0.43 0.0 -0.22 -0.1
1.82 0.65 -0.83 -0.42 -0.83 -0.42 -1.34 -2.07 -0.48 -0.03 -0.16 0.09
2.34 1.23 -0.38 -0.75 -0.95 -0.46 -1.85 -3.04 -1.81 -1.21 -1.0 -1.51
1.25 0.31 -0.42 -0.72 -0.66 -0.36 -0.98 -0.39 -0.16 0.03 0.48 0.04
1.47 0.3 -0.56 -0.51 -0.66 -0.21 -0.95 -0.61 -0.19 -0.15 0.17 0.08
2.06 0.71 -0.42 -0.92 -0.52 -0.3 -0.54 -0.54 -1.0 -1.1 -0.56 -1.4

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.