Heatmap: Cluster_4 (HCCA clusters)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	1 h after light	3 h after light	5 h after light	7 h after light	9 h after light	11 h after light	1 h after dark	3 h after dark	5 h after dark	7 h after dark	9 h after dark	11 h after dark
100180	-	1.93	-	-	2.12	-	-	-	-	-	-	1.94
100633	-	2.54	-	-	1.18	-	-	-	-	0.91	-	1.04
100667	-	-	-	-	3.58	-	-	-	-	-	-	-
101273	2.93	-	-	-	1.33	-	-	-	-	-	0.91	-
103305	-	-	-	3.58	-	-	-	-	-	-	-	-
105891	-2.0	-2.87	0.92	-0.58	0.84	0.89	0.86	-1.29	-1.06	0.26	-1.03	0.05
106568	-	-	-	3.58	-	-	-	-	-	-	-	-
111307	0.99	1.03	-	-	1.22	-	-	0.17	1.68	-0.7	-0.54	-
111387	-	-	-	3.58	-	-	-	-	-	-	-	-
113458	-	3.23	-	-	-	-	-	-	-	-	1.39	-
116071	1.23	0.26	0.2	0.58	0.3	-0.61	0.51	-1.23	-3.5	-1.63	-0.56	-0.02
119910	-0.24	-	-	-0.95	2.53	-	-0.85	1.95	-1.27	-	-	-
122097	-	-0.09	-0.29	-0.25	1.75	-	-	-	1.76	-0.1	0.78	-
135200	-	3.58	-	-	-	-	-	-	-	-	-	-
137460	-	-	-	3.58	-	-	-	-	-	-	-	-
138674	-	-	-	-	2.79	-	-	-	2.35	-	-	-
139105	-	2.13	-	1.24	-	-	-	2.39	-	-	-	-
14604	0.67	0.54	-0.07	-0.01	-0.55	-0.13	-0.59	-1.04	-0.42	-0.05	0.2	0.48
149261	-0.46	-1.88	-0.22	0.02	0.76	-1.14	1.28	1.13	-1.06	-1.21	-0.79	-0.18
18365	-	-	-	-	2.91	2.17	-	-	-	-	-	-
234301	-0.17	0.23	-1.1	-0.12	0.75	-0.68	0.51	0.23	0.08	-0.42	-0.22	-0.02
25442	-0.85	-0.08	-1.19	1.24	0.43	1.16	-0.71	-3.3	-0.88	-0.58	0.28	-0.04
25834	-	-	-	-	2.22	-	-	1.97	1.77	-	-	-
2601	-0.4	0.6	-	-0.35	1.98	0.66	-0.97	-0.59	-	-0.15	-2.41	0.18
27657	-	-	-	3.58	-	-	-	-	-	-	-	-
28122	1.82	0.4	-0.78	-0.57	0.41	-0.99	-1.83	-0.95	-0.62	-0.72	-0.4	0.32
28822	-	0.66	0.4	1.31	0.85	-	-	-	0.41	-	0.9	0.71
3014	-	3.58	-	-	-	-	-	-	-	-	-	-
34337	-	3.58	-	-	-	-	-	-	-	-	-	-
401999	-	-	1.03	-	1.48	-	1.24	1.23	-	-	-	1.3
402609	0.59	1.41	-	-0.53	-	-	-	-0.17	1.15	0.82	1.18	-
402675	-	-	-	-	3.58	-	-	-	-	-	-	-
403556	-	-	1.86	1.77	2.31	-	-	-	-	-	-	-
403961	1.15	1.43	-0.03	0.59	-0.71	-1.18	-1.24	-2.33	-1.1	-3.28	-0.31	0.64
403987	0.49	-0.2	0.01	-0.27	1.38	-0.06	1.19	-1.14	-1.76	-0.75	-3.36	-0.76
404363	-	1.83	-	0.8	-	-	1.37	1.17	0.91	-	-	-
404603	1.31	-	-	0.82	1.05	-1.21	-1.26	-0.53	-0.7	1.13	0.43	-
405138	-	0.96	0.03	-0.58	0.9	-	-	-0.31	-	1.29	-1.52	1.53
405570	-	1.86	-	-	2.12	-	-	-	-	-	-	2.01
405674	2.86	-	-	-	2.24	-	-	-	-	-	-	-
405850	-	2.5	-	-	-	-	-	-	-	-	2.66	-
406185	-	-	-	3.58	-	-	-	-	-	-	-	-
407327	0.86	0.03	-0.26	0.11	0.72	-0.77	-0.57	-0.24	-0.39	-0.74	-0.26	0.37
407769	-	3.58	-	-	-	-	-	-	-	-	-	-
408500	1.54	-1.31	-0.99	-0.36	1.52	-	1.12	0.3	-0.51	-1.18	-	-
408665	-	2.29	-	-	-	-	-	-	1.03	-	2.34	-
408701	-	-1.15	-	-	1.04	-1.74	0.82	1.08	1.85	0.0	-2.23	-0.99
409010	-	-	-	-	2.71	-	-	-	-	2.44	-	-
409113	1.71	-1.01	-	0.03	1.51	0.99	-	0.84	-	-0.76	-	-
409571	-	-	-	-	2.69	-	-	1.51	-	1.42	-	-
409598	0.79	-	0.76	-	1.22	-	2.04	-	-	0.1	-	0.08
409612	-	2.81	-	-	2.32	-	-	-	-	-	-	-
409615	-	3.58	-	-	-	-	-	-	-	-	-	-
409661	-	1.88	0.77	0.87	-	-0.93	0.75	-0.95	-	-0.89	-1.19	0.12
409930	1.17	1.36	-	-	-	-	-	0.3	1.92	-0.57	0.59	-
409996	-	-	-	-	1.9	-	1.66	0.72	-	0.79	-	0.8
410106	-	-0.24	-	1.18	1.6	-	2.55	-	-	-	-	-
410203	-	-	1.23	-	3.27	-	-	-	-	-	-	-
410281	1.05	-0.21	-2.78	-0.04	0.84	1.69	-2.57	-2.51	-0.41	-	-0.73	0.29
410446	-0.36	1.15	-	-1.06	-	-	0.77	1.09	-1.43	-	1.32	0.86
410478	3.27	-	-	-	-	-	-	-	-	-	1.25	-
410858	-	3.58	-	-	-	-	-	-	-	-	-	-
410942	-	0.95	-	1.12	2.53	-	-	-	-	1.09	-	-
411308	-	2.83	-	0.99	-	-	1.55	-	-	-	-	-
411349	-	1.39	-	-	3.23	-	-	-	-	-	-	-
411685	0.17	-0.36	-0.3	-1.51	1.83	-	-1.41	-1.36	0.75	0.96	-	0.01
411838	-	2.97	-	-	-	-	-	-	-	-	2.06	-
412146	-	2.71	-	-	-	-	-	-	2.45	-	-	-
412593	-	3.58	-	-	-	-	-	-	-	-	-	-
412728	0.35	0.84	-1.68	0.78	-1.22	-	0.19	-1.4	1.52	-	0.36	-0.35
412952	1.39	-	-	0.68	2.35	-	-	-	0.36	0.49	-	-
413033	-	1.97	-	0.6	-	-0.27	-	1.17	-	-0.43	1.46	-
413086	-	-	-	1.05	1.55	2.18	-	-	-0.48	-0.15	-	-0.22
413234	0.95	1.66	-	-	1.32	-	1.34	-	-0.08	-	-0.1	-
413463	0.67	-	-	-0.45	1.1	-0.01	-0.88	1.17	0.67	-	0.74	-1.01
413980	-	0.94	-2.61	-0.4	1.06	0.67	0.38	-0.08	-0.58	0.49	-1.58	-0.3
414920	-	2.53	-	-	-	-	-	1.8	-	1.45	-	-
415097	-	-	-	-	3.24	-	-	-	0.92	-	-0.64	-
415218	-	-0.64	1.06	-0.72	1.03	-1.45	1.45	1.31	-1.74	-1.41	-	-1.4
415434	-	-	-	2.6	-	2.57	-	-	-	-	-	-
415446	-	3.58	-	-	-	-	-	-	-	-	-	-
415614	0.37	-0.81	-0.69	-0.16	0.76	-1.5	-1.09	0.8	0.63	0.54	-0.6	-0.5
415951	-	3.58	-	-	-	-	-	-	-	-	-	-
416425	0.89	-0.15	-3.23	0.91	0.85	-1.64	0.36	-3.23	-3.71	0.52	0.37	-0.09
416464	-	-0.72	-0.66	1.01	1.8	1.69	-	-	-	-	1.03	-
416714	-	-	-1.73	0.54	1.07	-1.32	1.62	1.09	-0.82	-	-0.42	0.3
416971	1.59	0.78	-	-	-	-	-	-	2.86	-	-	-
417596	0.4	-	-	1.15	1.78	-	-0.46	-0.47	-	1.1	-0.64	-0.33
417683	-	1.3	-	-	0.6	1.14	-0.38	-0.65	-0.83	0.41	0.22	0.44
417693	-	3.58	-	-	-	-	-	-	-	-	-	-
418928	0.94	-0.06	-0.28	-0.19	-0.04	-0.11	-0.19	0.0	-0.03	-0.32	-0.18	-0.03
419525	1.8	-	-	-	2.18	-	1.2	-	0.77	-	-	-
420116	-	3.58	-	-	-	-	-	-	-	-	-	-
420154	-	3.12	-	-	-	-	-	-	-	0.71	-	0.72
420524	-	-	-	-	3.58	-	-	-	-	-	-	-
421357	1.22	0.67	-1.98	0.39	-	-1.63	-0.01	-0.17	-0.36	-0.11	-0.14	0.77
421812	-	3.58	-	-	-	-	-	-	-	-	-	-
421832	-	-	-	-	2.55	-	-	2.62	-	-	-	-
421956	-	1.99	-1.9	0.47	1.4	-	0.16	-	0.95	-1.56	-	-1.55
422422	0.51	-	1.43	1.89	0.89	-	0.61	-0.36	-	-	-	-
423569	-	3.58	-	-	-	-	-	-	-	-	-	-
423690	-	-0.19	-1.36	1.34	1.09	0.55	0.28	0.38	-1.35	-0.7	-0.72	-1.07
423867	-	2.15	-	-	-	-	-	-	2.92	-	-	-
424198	0.1	-0.71	-0.97	-	1.48	-0.62	0.82	-0.7	0.63	-0.79	-	0.88
424317	-1.09	1.31	-	0.92	0.34	-	-0.64	-0.06	0.23	-0.25	-0.54	0.67
424788	1.8	-0.32	-	1.36	1.2	-	-	-	-	-0.07	-0.22	0.06
425089	-	2.69	-	-	-	-	-	-	-	-	2.47	-
425518	-	1.05	-	2.8	1.56	-	-	-	-	-	-	-
425730	-0.06	1.66	-0.14	0.49	-	0.8	0.21	0.73	-1.13	-	-	-0.87
425736	-	-	-	-	3.58	-	-	-	-	-	-	-
425760	-	-	-	0.4	1.94	-	-	-	-	1.75	-	1.8
425831	-	-	-	3.58	-	-	-	-	-	-	-	-
426363	1.19	1.38	-	0.15	-	-	1.33	-	-	-	1.8	-
426563	-	1.23	-	-	1.48	-	-	-	-	1.21	1.06	1.3
426566	-	-	-	-	2.33	-	1.35	1.15	-	-	-	1.14
426604	-	3.58	-	-	-	-	-	-	-	-	-	-
426626	-	-	-	-	1.99	-	-	1.94	-0.41	-	-0.43	1.42
426792	-	-	-	3.58	-	-	-	-	-	-	-	-
426981	-	-	-	-	-	-	-	2.81	-	-	2.32	-
427145	-	2.58	-	-	-	-	-	-	-	-	-	2.59
427247	-	-	-	-	2.58	-	2.59	-	-	-	-	-
428626	0.52	-0.91	-	1.45	1.12	0.53	-	0.12	0.87	-0.88	-2.11	-
428827	0.77	-	-	-0.43	1.09	-1.25	1.17	-	-0.26	0.66	0.59	-0.26
429381	-	1.93	-	-0.16	2.25	-	-0.06	-	-	0.65	-	-
429801	-	-	-	-	3.58	-	-	-	-	-	-	-
429822	1.12	-	-	2.05	2.13	-	-	-	-	0.42	-	-
429974	-1.01	0.37	-	0.78	0.02	1.29	-0.01	0.91	-3.06	-0.05	-2.0	-0.28
430240	-	3.58	-	-	-	-	-	-	-	-	-	-
430713	-	0.58	0.64	-	2.09	0.99	1.43	-	-	-	-	-
431055	1.87	3.06	-	-	-	-	-	-	-	-	-	-
431558	0.06	-	-0.44	-0.59	1.16	-	1.53	1.04	-	-0.63	0.14	-0.7
432043	-	-	-	3.58	-	-	-	-	-	-	-	-
432132	-	-	-	-	3.58	-	-	-	-	-	-	-
432297	-	3.58	-	-	-	-	-	-	-	-	-	-
432320	-	3.58	-	-	-	-	-	-	-	-	-	-
432329	-	-	-	-	2.35	1.25	-	-	0.91	-	1.4	-
432472	-	-0.96	-	-	1.36	-	1.57	-0.02	-0.2	0.11	0.97	0.08
432626	0.57	-0.24	0.19	0.3	0.05	-0.43	0.14	-0.04	-0.1	-0.31	-0.15	-0.3
46563	1.18	-0.32	0.63	0.88	0.09	-0.75	-2.35	-1.82	-1.33	-0.76	0.54	-0.05
4917	-	1.07	-	-	-	1.8	-	1.68	-	1.05	-	0.21
58587	-	1.45	-	-0.12	1.96	-	1.01	-0.29	-0.45	-0.16	-	-
59367	-	3.01	-	-	1.98	-	-	-	-	-	-	-
68807	-0.03	-0.18	-0.54	-0.06	0.43	-0.53	0.27	0.17	0.25	-0.04	-0.01	-0.05
72299	-	-	-	2.54	2.62	-	-	-	-	-	-	-
73783	-	3.58	-	-	-	-	-	-	-	-	-	-
7436	-	-	-	-	3.58	-	-	-	-	-	-	-
74553	-	-	-	-	2.55	-	2.27	-	-	-	-	0.4
78269	-	3.25	-	-	-	-	-	-	-	-	-	1.3
84442	-	-0.81	-	-	1.29	-	2.61	1.18	-0.7	-	-	-
8750	-	3.58	-	-	-	-	-	-	-	-	-	-
90383	-	-	-	3.58	-	-	-	-	-	-	-	-
98138	0.3	1.94	-	0.3	-	-	-0.26	1.06	-	-	-0.7	1.12
99671	0.65	-0.44	-	0.79	1.21	-	0.94	-	-	0.88	-	0.91

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.