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Heatmap: Cluster_15 (HCCA clusters)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
1 h after light
3 h after light
5 h after light
7 h after light
9 h after light
11 h after light
1 h after dark
3 h after dark
5 h after dark
7 h after dark
9 h after dark
11 h after dark
-1.04 -1.54 -1.3 -1.66 0.33 0.5 0.6 0.81 0.71 0.25 -0.06 -0.49
-1.25 -1.72 -1.23 -1.89 0.34 -0.28 0.77 0.81 0.36 0.64 -0.13 0.34
-1.04 -2.9 -0.88 -1.95 0.29 0.21 0.75 1.03 0.68 0.41 -0.25 -0.52
-0.32 -0.23 -0.14 -0.11 0.12 -0.03 0.16 0.25 0.17 0.17 -0.03 -0.14
-0.16 -0.57 -0.75 -0.49 0.01 0.15 0.23 0.45 0.07 0.18 0.24 0.14
-0.44 -0.54 -1.56 -1.22 0.13 -0.04 0.76 0.66 0.31 0.53 -0.1 -0.24
-4.52 -2.2 -3.22 -0.87 -0.19 -0.63 0.89 0.88 1.17 1.09 0.11 -1.26
-0.05 -0.45 -1.79 -1.01 0.22 -0.29 0.19 0.69 0.75 0.45 -0.11 -0.3
-0.28 -0.29 -0.24 -0.07 -0.07 0.14 0.03 0.1 0.25 0.08 0.19 0.03
-1.05 -2.33 -1.26 -1.32 0.11 0.42 0.86 0.85 0.71 -0.07 0.12 -0.32
-0.45 -1.58 -1.37 -1.5 -0.18 0.18 1.0 0.96 0.42 0.3 -0.14 -0.39
-1.57 -1.06 -2.74 -1.0 0.16 1.06 0.76 0.52 0.61 -0.02 0.07 -0.64
-0.33 -2.28 -1.21 -1.44 -0.36 -0.03 1.0 0.79 0.35 0.72 -0.04 -0.3
-0.75 -1.08 -1.9 -1.01 0.21 0.05 0.66 0.62 0.71 0.53 -0.5 0.12
-0.25 -0.43 -0.37 -0.18 0.14 0.29 0.32 0.26 -0.07 0.15 0.09 -0.19
-0.88 -1.22 -1.03 -0.44 0.24 0.71 0.47 0.61 0.49 -0.07 -0.06 -0.41
-0.3 -0.72 -0.77 -0.56 -0.29 0.23 0.54 0.69 0.28 0.17 0.04 -0.18
-1.36 -1.14 -1.34 -1.43 0.19 0.62 0.73 1.25 0.1 0.03 -0.31 -0.37
-0.25 -1.14 -1.61 -0.97 0.06 0.13 0.59 0.77 0.38 0.55 -0.16 -0.22
-1.39 -2.05 -2.6 -1.85 0.66 -0.05 0.91 1.1 0.6 0.19 0.01 -0.51
-0.05 -1.43 -0.97 -1.3 0.35 0.35 0.85 0.76 0.04 0.29 -0.38 -0.58
-2.06 -2.38 -4.38 -1.91 0.57 0.7 0.02 1.42 0.05 0.72 0.04 -0.41
-0.47 -1.07 -2.45 -0.77 -0.06 -0.01 0.95 0.88 0.53 0.38 -0.54 -0.18
-0.38 -0.34 -0.21 -0.21 0.12 -0.03 0.2 0.4 0.19 0.08 -0.02 -0.01
-0.45 -0.8 -0.63 -0.29 -0.05 0.33 0.27 0.33 0.25 0.13 0.21 0.15
-0.62 -0.9 -3.49 -1.38 -0.17 0.13 0.9 0.87 0.3 0.35 0.37 -0.2
-1.79 -1.69 -0.88 -2.21 0.12 0.5 0.63 0.99 0.54 0.44 -0.01 -0.3
-0.59 -1.11 -1.09 -0.89 -0.36 0.43 0.52 0.32 0.49 0.47 0.38 -0.07
-0.63 -0.69 -0.45 -0.11 0.32 -0.0 0.47 0.6 0.16 -0.13 0.21 -0.42
-0.58 -0.48 -0.49 -0.07 0.4 0.18 0.37 0.44 0.21 -0.06 -0.0 -0.45
-1.27 -1.45 -2.07 -1.57 0.17 0.13 0.77 0.96 0.44 0.85 -0.1 -0.54
-0.68 -1.01 -0.88 -0.94 0.63 0.21 0.53 0.76 0.34 0.26 -0.25 -0.56
-0.49 -1.31 -2.24 -1.42 0.82 -0.25 0.1 0.72 0.73 0.49 0.11 -0.26
-0.5 -1.54 -2.86 -1.26 0.25 0.56 0.68 0.65 0.41 0.67 0.1 -0.83
-0.41 -0.56 -0.22 -0.09 0.22 0.11 0.33 0.22 0.24 0.1 -0.04 -0.18
-0.59 -0.59 -0.39 -0.22 0.21 -0.24 0.42 0.45 0.36 0.11 -0.0 -0.04
-1.08 -0.76 -1.43 -1.38 0.31 0.17 0.51 1.12 0.11 0.44 0.23 -0.69
-0.45 -0.73 -0.44 -0.33 0.09 -0.23 0.49 0.45 0.34 0.2 0.18 -0.15
-2.21 -1.38 -0.91 -0.69 0.08 0.76 0.64 0.9 -0.03 0.42 0.05 -0.49
-0.96 -1.31 -2.05 -0.74 0.26 0.04 0.48 0.88 0.31 0.38 0.34 -0.03
-0.74 -1.41 -1.64 -0.91 -0.31 0.32 0.75 0.92 0.27 0.41 0.2 -0.23
-0.56 -1.33 -1.69 -1.06 0.45 0.17 0.47 0.88 0.31 0.22 0.0 0.04
-1.08 -1.36 -2.05 -1.45 0.3 -0.07 0.73 0.72 0.65 0.5 0.24 -0.19
-0.3 -0.38 -0.39 -0.13 0.07 0.02 0.23 0.32 0.25 0.1 0.09 -0.11
-1.06 -1.02 -2.02 -1.12 0.6 0.41 0.74 0.61 0.2 0.31 -0.03 -0.13
-0.62 -0.64 -0.7 -0.24 -0.14 0.19 0.37 0.14 0.37 0.19 0.38 0.08
-1.02 -1.55 -2.54 -0.92 -0.08 0.38 0.62 0.9 1.13 0.59 -0.51 -1.25
-1.25 -2.8 - -1.33 0.05 0.06 0.83 0.99 0.57 0.51 0.24 0.13
-0.64 -2.1 - -4.11 0.1 -0.33 0.58 0.57 0.66 0.57 1.0 0.21
-0.65 -1.26 - -2.23 0.01 0.56 0.73 0.52 -0.02 0.42 0.37 0.61
-0.21 -0.72 -1.27 -0.64 0.28 0.27 0.41 0.46 0.12 0.34 0.25 -0.3
-0.44 -1.56 -2.9 -0.71 0.21 0.29 0.53 0.58 0.98 0.46 -0.44 -0.38
-0.74 -1.37 -3.04 -1.25 -0.19 0.62 0.76 0.41 0.61 0.47 0.03 0.16
-1.41 -2.54 -6.55 -2.55 0.06 0.77 0.85 0.83 0.66 0.53 -0.41 0.22
-1.31 -2.16 -5.35 -1.94 -0.07 0.57 0.75 1.28 0.34 0.72 0.17 -1.04
-0.35 -0.27 -0.61 -0.06 0.12 -0.07 0.05 0.32 0.42 0.28 -0.13 -0.02
-0.78 -1.25 -1.29 -1.24 0.18 0.18 0.59 1.06 0.35 -0.0 0.06 -0.01
-0.25 -0.25 -0.33 -0.22 0.06 0.02 0.09 0.2 0.24 0.26 0.11 -0.1
-0.17 -0.19 -0.19 0.03 0.14 0.05 0.14 0.23 0.12 -0.11 -0.01 -0.13
-0.82 -0.83 -1.34 -0.95 0.07 0.54 0.49 0.48 0.2 0.81 0.17 -0.64
-0.23 -1.14 -1.78 -0.6 -0.2 -0.32 0.56 0.57 0.48 0.79 0.14 -0.17
-0.8 -0.71 -0.47 -0.31 0.44 0.29 0.49 0.63 0.28 0.08 -0.43 -0.43
-0.61 -1.56 -1.26 -1.24 0.42 0.54 0.65 0.75 0.12 0.45 -0.26 -0.27
-0.21 -0.59 -0.52 -0.43 0.19 -0.04 0.46 0.26 0.33 0.11 0.14 -0.14
0.2 -1.08 -0.98 -0.97 0.12 -0.05 0.38 0.54 0.39 0.23 -0.02 0.12
-0.69 -1.37 -1.6 -1.65 0.13 0.5 0.97 0.46 0.66 0.54 -0.25 -0.66
-0.77 -0.91 -0.8 -0.54 0.05 -0.14 0.46 0.5 0.71 0.59 -0.03 -0.37
-1.11 -1.32 -1.98 -0.9 0.09 0.38 0.98 0.57 0.48 0.51 0.17 -0.77
-0.83 -1.58 -1.27 -1.29 -0.04 -0.04 0.85 0.48 0.73 0.36 0.46 -0.29
-0.2 -0.1 -0.06 -0.1 0.13 -0.0 0.11 0.15 0.16 0.09 -0.09 -0.14
-0.55 -1.48 -1.47 -0.85 0.08 0.85 0.57 0.86 0.09 0.14 0.11 -0.67
-1.7 -1.58 -0.45 -1.76 -0.09 0.59 0.73 1.1 0.63 0.41 -0.65 -0.81
-0.79 -1.97 -0.44 -1.34 -0.04 0.29 0.39 1.05 0.6 0.42 0.17 -1.04
-0.6 -0.68 -1.38 -0.91 -0.24 -0.26 0.67 0.81 0.3 0.53 0.26 -0.14
-0.98 -1.33 -1.86 -1.84 0.42 -0.06 0.97 1.04 0.15 0.59 -0.06 -0.59
-0.78 -1.52 -0.74 -1.7 -0.12 0.09 0.62 0.35 0.6 0.6 0.55 -0.21
-0.39 -0.28 -0.44 -0.32 -0.01 -0.05 0.29 0.47 0.24 0.22 -0.01 -0.04
-0.81 -1.14 -0.78 -1.22 0.23 0.06 0.37 0.69 0.59 0.33 0.26 -0.19
-0.4 -0.66 -0.72 -0.44 0.06 0.08 0.36 0.44 0.23 0.22 0.27 -0.04
-0.35 -0.86 -2.53 -0.82 0.52 -0.12 0.91 0.82 -0.36 0.27 0.03 -0.12
-0.9 -1.4 -1.1 -1.12 -0.04 0.48 0.6 0.5 0.5 0.48 0.17 -0.11
-0.63 -1.72 -1.31 -1.14 -0.18 -0.27 0.72 0.39 0.89 0.63 0.41 -0.32
-0.89 -0.76 -0.64 -0.38 -0.02 0.21 0.77 0.92 -0.05 -0.1 0.08 -0.39
-0.29 -0.25 -0.18 -0.19 -0.01 0.1 0.1 0.13 0.26 0.04 0.13 0.05

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.