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Heatmap: Cluster_40 (HCCA clusters)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
1 h after light
3 h after light
5 h after light
7 h after light
9 h after light
11 h after light
1 h after dark
3 h after dark
5 h after dark
7 h after dark
9 h after dark
11 h after dark
-0.4 -2.25 -2.45 -1.29 - 2.75 -0.69 - -2.44 0.21 0.61 -2.1
- -1.38 - - - 2.44 1.45 -1.11 1.31 -0.98 - -
- -0.96 - - -0.86 2.72 -0.72 - -0.89 -0.56 -0.86 0.97
- - - - - 3.58 - - - - - -
- -0.89 - - -0.39 2.2 -0.89 - 1.26 0.09 -0.06 0.19
- - 0.24 0.86 - 2.38 0.45 - - - 0.74 -0.44
0.97 0.6 - -0.02 - 2.35 - - - 0.28 - 0.29
- -0.68 - - 1.5 2.67 - -0.74 - - - 0.65
- - - - - 3.34 - - - 0.89 - -
- - - 1.5 - 2.99 0.3 - - - - -
-1.87 -0.25 -0.25 0.51 0.9 1.24 -0.77 -0.98 0.02 -0.3 -0.0 -1.05
-1.15 -0.37 -0.25 0.51 0.64 1.38 -0.55 -0.06 -1.21 -0.82 0.36 -1.19
- -1.25 - - - 2.39 -0.33 -0.3 -1.46 -1.32 1.98 -
-1.66 0.24 -1.11 -0.57 - 2.37 -1.4 0.61 -2.72 -0.23 0.16 -2.46
- - - 1.31 - 3.25 - - - - - -
- - - - - 3.58 - - - - - -
- - - - - 2.74 - - 1.16 - 1.61 -
- - - - - 3.58 - - - - - -
- - - - - 3.25 - - - 1.3 - -
1.47 -0.68 - 0.84 -0.84 2.33 - -0.6 - - -0.78 -
- -1.51 -0.19 0.78 - 2.23 1.02 0.45 -1.72 - -1.73 -1.46
- - - - - 3.08 - 1.3 - - - 0.13
- -0.35 - -0.57 -3.2 2.23 -0.76 0.95 - 0.52 0.02 -0.36
- - 0.15 0.52 - 3.03 - - - 0.34 - -
-0.72 -1.05 -0.51 0.52 -1.52 1.53 0.05 0.05 -0.55 -0.35 0.71 -1.45
- -0.28 - - - 2.13 -0.07 - -0.49 1.28 -0.04 0.79
- -0.37 - -1.23 1.38 2.8 -1.13 -1.4 - - - -1.29
0.02 -0.56 -0.31 -0.22 -0.42 1.61 0.1 0.13 -0.59 -1.05 -0.66 -0.18
- - - - - 2.77 2.09 - -0.11 - - -
- - - 0.36 - 2.98 - - 0.33 0.66 - -
- - - - - 3.36 - - - - 0.78 -
-0.58 -0.4 -0.18 0.13 -0.36 1.15 0.71 -0.14 -1.36 -0.33 -0.09 -0.11
- -1.03 - - 2.17 2.59 - -1.01 - - - -1.02
- - - -0.65 - 2.98 - 1.8 - - - -
- -1.02 -0.96 0.2 -0.5 2.35 -0.75 - 0.68 -0.77 - 0.33
- - - 0.31 - 2.86 0.41 0.14 - 0.12 - -
- - - 0.56 - 2.27 - 1.06 0.68 0.99 - -
0.61 -1.85 0.63 -2.02 - 1.84 0.21 -1.78 -0.42 -1.4 0.96 -1.7
0.07 -0.38 0.86 0.12 -0.87 1.73 0.47 -1.02 -1.21 -1.73 -2.52 -0.68
- - - 2.2 - 2.89 - - - - - -
- - - - - 3.58 - - - - - -
2.1 - - - - 2.95 - - - - - -
- -0.89 - -0.72 0.54 3.01 -0.62 - - - -0.59 -
-2.39 0.58 -1.84 -0.06 - 1.98 -0.14 0.17 -0.8 0.16 -0.5 -0.51
1.86 - - - - 2.71 - - - - 0.86 -
- -1.1 -0.31 -1.95 -1.07 2.02 1.34 0.12 0.07 -0.81 -3.08 -0.79
- -0.4 - - 0.11 2.95 - - - - 1.28 -
0.74 0.55 -0.66 -0.16 - 1.61 -0.75 -1.38 -0.01 -0.23 0.33 -2.35
1.85 - - - 1.23 2.07 - - - - 0.88 -
- - - - - 3.58 - - - - - -
-0.5 -0.06 -0.88 0.33 -0.66 0.87 -0.19 0.02 -0.07 -0.07 0.25 0.14
1.27 - - - - 2.81 - - - - 0.23 0.5
-0.46 - - - - 2.72 -1.01 0.72 - -1.15 -1.45 0.78
-0.08 - - 0.51 - 2.77 - 1.15 - -0.77 - -
0.99 -1.42 - - -1.58 2.67 - -1.35 -0.03 -1.44 - 0.27
- - - - 0.56 3.4 - - - - - -
-0.14 -0.24 0.01 -0.21 -0.11 0.77 -0.38 -0.31 -0.13 0.15 0.35 -0.18
- - - 0.44 - 3.0 - 0.8 - -0.13 - -
-1.7 -1.13 -0.19 0.06 -2.73 1.43 0.31 -1.5 0.42 -0.2 0.81 -0.14
- - - - - 3.58 - - - - - -
0.79 -0.49 -3.06 -0.33 -0.15 1.74 -0.65 -0.24 - 0.39 -0.0 -0.72

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.