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Heatmap: Cluster_19 (HCCA clusters)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
1 h after light
3 h after light
5 h after light
7 h after light
9 h after light
11 h after light
1 h after dark
3 h after dark
5 h after dark
7 h after dark
9 h after dark
11 h after dark
0.65 -0.18 2.55 0.88 - - -0.17 - - - - -0.03
1.96 - 2.77 - - - - - 0.36 - - -
-1.67 -0.87 1.12 -1.25 -0.55 -1.44 -0.92 0.84 -0.28 0.2 0.9 0.42
- 0.07 3.09 -0.82 0.39 - - - - - - -0.85
1.51 - 2.77 - - - -0.31 0.59 - - - -
- - 2.12 0.19 -0.72 - - 1.68 -1.16 -0.83 0.19 -0.82
0.05 1.42 2.25 -0.99 - - - 0.98 - -0.84 -0.99 -
- - 3.58 - - - - - - - - -
- 0.37 2.18 0.2 -0.77 0.2 -0.71 0.02 -2.14 -2.0 0.24 -
0.61 - 2.95 - - - - 0.69 -0.41 - -1.38 -
- - 3.07 - - - - - - 1.55 -0.6 -
- - 2.94 -1.26 - 1.5 - - -1.16 - -0.67 -
- - 3.47 -0.18 - - - - - - - -
1.13 - 2.81 - 0.56 - - - - - - 0.42
1.78 0.32 2.25 0.31 - - - - -1.81 - - 0.05
-0.46 -0.25 2.51 -0.78 0.92 -0.14 - -1.21 - -2.15 -0.54 -
- - 2.88 0.33 - - 1.75 - - - - -
0.28 -0.86 3.0 - -0.09 - -0.59 - - -0.61 - -
- - 2.65 0.76 -0.4 - 0.34 - - -0.67 - 0.45
- 0.25 2.57 -0.17 0.07 - - -1.18 0.2 - -1.29 -0.1
- - 3.58 - - - - - - - - -
2.21 - 2.88 - - - - - - - - -
-0.02 - 2.77 - - - - - - - 1.6 0.22
-0.01 - 3.16 - -1.33 - -1.56 -1.83 -1.03 -1.7 -2.0 -
1.22 -0.13 2.18 - - - -1.19 0.64 0.21 -0.74 - -1.08
- - 2.73 - - 1.18 0.22 - - 0.08 -0.22 -
- -0.18 3.47 - - - - - - - - -
- - 3.45 -0.75 - - - - - - -1.09 -
- 0.7 2.84 - -1.74 - - 0.07 -1.78 -1.6 -0.17 -1.48
- - 2.47 -1.82 - 1.2 1.65 - -1.72 - -1.23 -
1.1 - 3.14 - - - - - 0.03 - - -
- - 3.28 - - - - - - - - 1.19
1.54 - 2.6 - - - - 0.3 0.52 - - -1.46
- - 2.85 - - - - 0.94 - - -0.23 1.0
- - 2.97 - - - - 2.06 - - - -
-0.54 -0.1 1.45 -0.37 -2.48 -0.71 -0.39 0.97 -1.58 0.76 -2.15 0.15
0.55 -1.55 1.49 -0.06 0.06 -0.04 -0.35 -0.52 -0.83 -0.07 0.16 -1.75
- - 3.01 - -0.46 - - - -0.9 - - 1.42
- - 3.58 - - - - - - - - -
- 1.15 3.01 0.8 - - - - - - - -
0.97 -1.31 1.97 -2.01 0.31 - - -1.15 -1.34 0.43 0.64 -1.08
- - 3.17 - - - - - - - 1.57 -
-0.47 0.3 2.82 -0.05 - -1.2 - -0.27 - -1.36 -1.44 -
-0.36 - 2.19 -1.48 - 0.54 - 0.81 0.22 -1.05 - 0.54
-0.52 0.42 1.84 0.07 -1.01 -0.21 -0.06 0.66 -0.99 -0.72 -1.56 -
- - 2.88 - - - 1.48 - -0.27 0.02 - -
- -0.05 2.13 - - 1.04 - 0.9 -0.3 -0.12 - 0.0
- - 2.46 -0.09 - - 1.33 - 0.58 -0.28 -0.43 -
-0.26 0.39 2.0 -2.28 -1.05 0.62 -0.84 -2.11 -0.7 - 0.79 -0.97
0.97 -2.03 1.76 -2.03 0.13 0.3 - 0.73 -3.6 -1.82 0.28 -0.71
0.58 - 2.79 1.47 - - - - - -0.31 - -
- - 3.58 - - - - - - - - -
- - 3.28 1.21 - - - - - - - -
- 0.02 2.36 1.07 - - -1.09 -1.29 -0.24 -1.23 - 0.7
- - 3.58 - - - - - - - - -
1.08 - 2.27 -0.91 - -0.6 - 0.58 -2.26 - 0.93 -1.92
-1.35 -2.32 1.84 0.41 - - -0.12 1.11 - -0.42 1.36 -3.09
- - 3.58 - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.