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Heatmap: Cluster_56 (HCCA clusters)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
1 h after light
3 h after light
5 h after light
7 h after light
9 h after light
11 h after light
1 h after dark
3 h after dark
5 h after dark
7 h after dark
9 h after dark
11 h after dark
0.45 -0.09 -0.08 -0.34 -0.52 -0.46 0.28 -0.26 -0.03 0.57 -0.07 0.09
-1.88 -0.99 0.63 1.29 -0.65 -0.66 -0.26 0.4 -1.13 1.01 -0.56 -0.61
-0.11 -1.31 - 1.43 0.88 0.49 0.32 - -0.56 0.02 0.61 -1.86
-1.25 0.93 - 0.27 -1.87 -1.8 1.13 -2.05 0.29 -0.03 1.2 -0.04
- 2.0 - 1.83 - 2.15 - - - - - -
- - - 2.95 - - - - - 2.1 - -
- 1.78 0.85 1.51 - -1.19 -1.28 -0.09 -1.48 -1.15 - 0.38
- - - 2.51 - - - - - 2.66 - -
1.73 - - 2.32 - 1.05 - - 0.71 - - -
-0.11 -0.04 0.07 0.39 0.03 -0.04 0.01 -0.06 -0.08 -0.04 -0.11 -0.09
- 0.8 - 2.14 - - 1.33 1.74 - - - -
2.19 - - 2.2 - - - - - 1.5 - -
- - - 3.58 - - - - - - - -
-0.17 0.04 -0.59 0.51 0.15 -1.17 -0.37 0.22 -0.63 0.5 0.62 -0.14
0.7 0.19 -0.74 0.24 -0.12 0.0 -0.56 -0.41 -1.31 0.04 0.39 0.43
-0.02 -0.06 -0.42 -0.57 -1.19 0.17 0.56 -0.59 0.71 0.21 -0.18 0.32
-0.08 0.25 0.17 0.33 0.16 -0.06 -0.28 -0.3 0.01 -0.25 0.1 -0.24
-1.32 -0.11 0.34 1.75 -0.26 -0.28 -0.32 -0.13 -0.64 -1.04 -0.04 -0.83
- 0.29 - 2.39 0.71 -0.81 -0.86 - -1.32 -0.07 0.5 -
0.97 -0.56 -1.07 0.76 -0.2 0.0 0.23 -0.1 0.52 -0.0 -1.37 -1.37
- - - 3.58 - - - - - - - -
- - - 1.93 - - 2.07 - - - 2.0 -
- 0.31 0.79 3.05 - -0.45 - - - - - -
- -2.11 - 1.34 - 0.8 0.53 -0.81 - 0.94 -2.02 1.73
- - - 3.58 - - - - - - - -
0.47 -0.92 -0.22 0.58 -0.44 -0.43 -0.26 0.65 0.2 0.42 -0.55 -0.55
-0.29 -0.67 -0.73 0.72 0.57 -1.97 -0.84 0.5 0.5 -1.05 0.95 -0.41
- - - 3.58 - - - - - - - -
- - - 3.58 - - - - - - - -
- 0.02 - - -0.75 -0.91 -0.73 -1.0 1.27 0.66 1.06 1.42
0.64 0.03 -1.43 -0.01 -1.22 -0.48 0.26 -0.67 0.09 0.17 0.69 0.37
-2.19 0.37 0.19 0.6 -0.24 -0.12 0.49 -0.04 -1.72 0.56 -0.39 0.19
-1.73 -0.02 0.83 1.4 -0.32 -1.16 0.64 -0.42 -1.88 0.37 -1.78 -0.18
2.29 - - 2.83 - - - - - - - -
0.11 -1.74 -0.94 1.65 0.1 0.45 - 0.75 0.4 0.28 - -1.68
- -0.82 - 1.27 - - -0.29 - 1.57 -0.43 1.9 -0.42
- - - 2.84 - - 2.28 - - - - -
- 2.05 - 1.89 - - - 2.05 - - - -
- 0.07 - 2.83 0.26 - - - 1.4 - - -
- - - 0.33 - -0.77 2.17 0.54 0.3 - 1.58 -
- 0.8 - 1.9 - - - 1.07 - - 2.15 -
- - - 3.58 - - - - - - - -
- - - 3.29 1.13 - - - - - - -
- - - 3.58 - - - - - - - -
0.19 0.68 0.39 0.24 -1.28 -0.93 0.19 -0.62 -0.52 -0.39 0.63 0.02
- - - 2.92 - - - 2.16 - - - -
1.08 - - 2.84 - - - 0.53 - 0.34 - -
- - - 2.51 - - - - - 2.66 - -
2.89 - - - - - - - - 2.2 - -
- - - 3.58 - - - - - - - -
-1.85 -0.39 -0.47 0.2 -1.07 -0.38 0.49 0.47 0.37 0.74 0.44 -0.43
- 0.3 - 2.66 - - 1.22 - - - 1.08 -
- 0.57 0.31 - - - - - 1.9 0.64 1.99 -
- -1.18 -1.38 1.81 - 0.97 - 0.63 0.96 0.8 - -1.07
0.17 0.27 -0.18 0.2 -0.31 0.14 0.12 -0.42 -0.47 -0.04 -0.17 0.38
- - - 3.58 - - - - - - - -
- 2.23 - -0.18 1.24 - - 1.58 - 0.13 - -
- - - 2.5 - - - 2.67 - - - -
- 0.03 1.41 2.19 - - - - 1.46 0.01 - -
- 1.96 - 2.03 - - - 1.22 - -0.23 - -0.22
- - - 2.34 - - 0.78 - 0.31 - 1.99 -
- - - 3.04 1.92 - - - - - - -
1.8 - - 0.8 - -0.47 - -0.54 -0.77 1.52 0.25 -0.47
-1.42 0.0 0.24 0.47 -0.48 -0.09 0.49 0.01 -1.37 0.69 -0.44 0.32
-0.17 0.15 -0.12 0.38 -0.1 -0.67 -0.17 -0.49 -1.29 0.95 0.1 0.27
-2.65 0.16 0.75 1.41 -0.98 -1.0 0.89 -0.64 -3.46 0.57 -1.29 -0.17
- -0.41 - 2.07 - - 1.45 -0.41 1.5 -0.43 - -
- 1.97 0.59 2.12 - - - - 0.04 - -1.96 -0.1
- - 0.91 2.95 - 1.26 - - - - - -
-0.09 -0.3 -0.37 -0.36 -0.16 0.07 0.5 -0.21 0.25 0.19 0.39 -0.27
-0.68 -0.1 -0.02 -0.24 -0.15 0.13 0.05 0.08 0.06 0.65 0.18 -0.38
1.14 - - 2.42 - - 0.54 1.59 - - - -
1.17 - 0.14 1.76 - - - 1.34 - 0.48 - 0.41
0.12 -0.17 -0.36 0.15 -0.95 -0.46 0.19 -0.18 0.16 0.12 0.68 0.1

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.