Heatmap: Cluster_12 (HCCA clusters)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
1 h after light
3 h after light
5 h after light
7 h after light
9 h after light
11 h after light
1 h after dark
3 h after dark
5 h after dark
7 h after dark
9 h after dark
11 h after dark
- - 1.4 - - 1.75 2.58 - - - - -
- - - - - - 3.2 - - - 1.48 -
0.11 -0.71 - 0.24 -0.27 -0.62 1.79 0.87 - 0.37 0.1 -
- - - - - - 3.58 - - - - -
-1.44 -1.41 -0.52 -0.25 - -0.99 1.61 -0.66 1.07 0.05 0.35 0.14
-0.69 0.02 -0.52 -0.02 0.26 0.72 0.82 0.34 -0.23 -0.39 -1.48 -0.26
- - - - - - 3.58 - - - - -
-1.97 -0.47 - 0.05 1.34 -0.99 1.47 -0.93 0.67 -0.82 -0.17 -0.72
- 0.69 - - - - 2.08 - 1.21 - 0.08 1.48
- - - - - - 3.58 - - - - -
- 1.03 - 1.14 - - 2.53 0.97 - - - -
- - - 1.29 - - 3.26 - - - - -
- - - - - - 3.02 - 0.72 - 1.17 -
- - - - - - 3.58 - - - - -
- 2.14 - -0.09 - - 2.5 - 0.01 - - -
- - - - - - 2.65 - - - 2.51 -
- - - - - - 3.58 - - - - -
-0.48 -1.35 - -1.64 - - 2.09 -1.28 0.46 1.24 1.11 -
- - - 0.68 - 2.21 2.53 - - - - -
2.23 - - - - - 2.33 - - - 1.19 -
0.98 0.21 - - - - 2.95 0.23 - - - -
- 0.34 -1.12 -0.3 -1.67 1.07 1.67 0.22 -0.1 - 0.57 -1.77
- - - 2.13 - - 2.93 - - - - -
- - - - - - 2.84 - - - 1.11 1.42
- - - - - - 3.39 - - - 0.61 -
- 1.04 - - - - 2.54 - 0.78 - 1.27 -
- - - - - 1.67 3.14 - - - - -
- - - - - - 3.58 - - - - -
- - - 1.15 - 2.11 1.94 0.7 - - - -
- 2.28 - - - - 2.84 - - - - -
- - - - - - 3.58 - - - - -
- - - 0.99 - - 2.26 1.36 - - - 1.4
- - - 0.86 - - 2.59 - - 1.01 - 1.1
-1.75 -2.58 - - - 0.85 1.95 1.14 -0.18 0.48 -2.75 0.32
0.7 0.68 -0.02 0.02 -1.08 -1.82 1.32 0.11 -1.32 -2.01 -0.26 -0.06
- - - - - - 3.58 - - - - -
- - - - - - 2.97 - - - - 2.06
- - - - - - 3.3 - 1.12 - - -
- - - - - 1.71 3.13 - - - - -
-0.78 0.29 -0.84 0.67 -1.25 0.06 1.39 0.95 -0.23 -2.65 -2.8 -0.17
- - - - - - 3.34 - - - 0.88 -
- - - - - - 3.58 - - - - -
- - - - - - 3.58 - - - - -
- - - - - - 3.03 - - - 1.95 -
- - - - - - 3.04 - 1.91 - - -
- - - - - 1.81 2.87 - - 0.22 - -
- - - - - - 3.58 - - - - -
- 0.32 - - - 1.47 3.0 - - - - -
- 1.28 - - - - 3.26 - - - - -
0.91 0.5 -0.12 0.83 - - 1.92 -0.91 - 0.76 - -
- - - - - - 3.58 - - - - -
- - 0.48 -0.61 - 0.83 2.24 -0.32 - 0.82 - -0.17
-0.28 -1.1 - - -0.85 -0.96 2.46 -0.07 -1.3 0.46 -1.27 0.0
- - - - - - 3.58 - - - - -
0.85 0.04 - - - - 2.28 - 2.11 - - -
- 1.37 - 0.17 - - 2.03 0.54 - - 0.3 0.61
1.65 - - - - - 2.12 -0.17 -0.37 0.89 - -0.03
- 0.36 - - - - 2.66 1.57 - - - 0.51
- 0.9 - -1.33 0.22 1.52 2.08 -0.96 - -0.9 -1.2 -
-0.89 -0.06 -0.2 -0.47 -0.15 0.27 1.49 -0.84 -0.75 -0.08 -0.19 0.04

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.