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Heatmap: Cluster_1 (HCCA clusters)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
3 h after light
7 h after light
11 h after light
2 h after dark
6 h after dark
10 h after dark
0.19 -0.01 0.09 0.53 -0.38 -0.76
-0.37 -24.1 - 2.39 - -
0.03 0.11 0.19 0.22 -0.21 -0.47
-0.11 -0.24 0.21 0.54 -0.21 -0.41
0.19 0.01 -0.35 0.99 -0.86 -0.89
-0.27 0.2 0.54 0.6 -0.59 -1.4
-0.37 0.33 0.58 0.6 -0.67 -1.6
1.09 0.32 -0.52 0.46 -1.65 -2.15
-0.08 0.06 0.26 0.67 -0.5 -0.94
0.72 -0.02 -0.78 1.31 -3.23 -2.29
-0.03 0.07 0.21 0.77 -0.46 -1.39
0.01 0.13 0.25 0.49 -0.5 -0.74
0.45 -0.25 -0.89 1.39 -1.44 -1.93
0.04 0.13 0.25 0.61 -0.54 -1.07
0.58 0.06 0.31 1.15 - -
1.52 - - - - 1.64
1.82 -0.82 - -0.18 -1.71 -0.47
0.4 -0.38 -0.39 0.82 -0.88 -0.25
0.08 -0.35 -0.27 0.42 0.03 -0.04
0.03 -0.23 -0.16 0.5 -0.09 -0.19
-0.21 -0.6 0.21 0.63 0.21 -0.71
0.4 0.5 -0.08 0.74 -1.32 -2.03
-0.1 0.2 0.3 0.38 -0.39 -0.68
0.11 0.03 0.04 0.35 -0.22 -0.43
-0.61 0.31 -0.04 0.74 -0.42 -0.49
-0.1 0.16 0.33 0.72 -0.71 -1.2
0.23 -0.0 -0.11 0.67 -0.41 -0.86
0.37 -0.27 -0.13 -0.05 0.21 -0.26
1.52 - - - - 1.64
0.15 -0.34 -0.11 1.02 -0.49 -1.18
0.83 -1.09 -0.8 0.46 -0.05 -0.27
0.72 -0.28 -0.16 1.4 - -
0.13 0.15 0.06 0.64 -0.58 -0.91
-0.06 0.03 0.24 0.45 -0.28 -0.65
1.67 - - - - 1.5
- - 0.91 - 0.61 1.38
0.03 -0.32 -0.16 0.53 -0.14 -0.1
0.79 -0.07 -0.18 0.18 -0.76 -0.5
1.03 0.25 -1.35 0.87 -1.29 -2.87
-0.1 0.13 0.28 0.75 -0.66 -1.18
0.41 0.15 -0.02 0.89 -1.42 -1.52
0.45 0.13 -0.06 0.99 -1.56 -2.01
0.85 0.77 -0.11 0.65 - -
0.41 0.05 -0.66 0.91 -0.61 -1.08
-0.05 0.18 0.29 0.37 -0.33 -0.78
0.05 0.08 0.03 0.14 -0.16 -0.17
0.05 0.08 0.12 0.34 -0.25 -0.48
-0.05 -0.08 0.09 0.48 -0.3 -0.28
0.08 -0.07 0.09 0.51 -0.34 -0.49
0.14 0.0 -0.03 0.1 -0.08 -0.15
1.38 -1.15 -1.59 1.21 - -1.75
-0.46 - 0.58 1.63 - -0.58
0.38 0.68 -0.65 0.07 -0.44 -0.57
0.98 -0.32 -0.69 0.99 -1.35 -2.14
0.91 -1.22 -1.2 0.93 -0.99 -0.25
-0.87 -0.91 0.57 0.48 -0.32 0.31
0.16 -0.05 -0.4 1.01 -0.79 -0.84
0.03 -0.04 -0.04 0.86 -0.6 -0.84
0.01 0.0 0.13 0.43 -0.27 -0.47
0.14 -0.1 -0.73 1.42 -1.42 -1.66
-0.64 -0.27 -0.67 1.07 -0.34 0.01
-0.07 0.09 0.21 0.73 -0.55 -1.04
-0.31 0.49 0.09 1.04 -1.35 -1.88
0.69 0.0 -1.33 1.0 -0.51 -1.77
0.66 0.0 0.36 0.84 -2.55 -2.58
0.58 -0.73 -0.25 -0.12 0.12 0.09
0.17 0.06 -0.03 0.7 -0.54 -0.89
0.19 0.04 0.11 0.44 -0.31 -0.77
-0.28 -0.49 -0.25 0.84 -0.21 -0.04
1.08 0.01 -1.25 0.4 -1.3 -0.45
0.14 -0.12 0.02 0.4 -0.32 -0.24
0.01 0.07 -0.52 0.43 -0.28 0.11
0.0 0.03 0.1 0.63 -0.32 -0.83
-0.03 -0.2 -0.12 0.78 -0.46 -0.36
1.36 -1.33 -1.37 0.87 -0.94 -1.77
-0.77 0.14 0.3 0.87 -0.76 -0.59
-0.01 0.26 0.26 0.53 -0.52 -1.08
0.04 0.2 0.3 0.56 -0.6 -1.12
0.16 0.14 0.13 0.84 -0.96 -1.42
-0.47 -0.31 0.35 0.78 -0.2 -0.71
0.43 -0.0 -0.7 0.98 -0.85 -0.96
-0.09 0.74 0.2 -0.37 -0.9 -0.1
0.96 -0.29 -0.96 1.23 -1.42 -
0.4 0.03 -0.72 1.25 -1.42 -1.66
1.17 0.21 -2.42 0.16 -0.77 -0.51
-0.02 -0.09 0.09 0.89 -0.6 -0.99
0.83 0.42 -1.03 0.77 -0.51 -26.93
0.03 0.12 0.06 0.45 -0.27 -0.61
0.7 0.08 -1.48 0.72 -3.17 0.27
0.34 0.14 -0.39 -0.16 -0.53 0.35
0.58 0.17 -0.29 1.03 -1.58 -2.42
0.21 0.17 -0.01 0.57 -0.48 -0.94
0.13 -0.8 -0.65 0.79 0.08 -0.14
-0.15 -0.16 0.02 0.85 -0.53 -0.51
0.28 0.0 -0.16 0.26 -0.24 -0.25
-0.01 0.06 0.11 0.5 -0.22 -0.71
0.75 -0.1 -1.88 1.56 -3.07 -4.03
0.15 -0.08 -0.5 0.39 -0.0 -0.11
-0.21 0.12 0.03 0.57 -0.31 -0.45
0.67 - 0.61 - -1.24 1.3
0.04 -0.33 -0.14 0.55 -0.14 -0.16
0.55 0.03 -0.55 0.13 -0.52 0.06
0.15 0.21 0.07 0.58 -0.55 -0.98
-0.14 -0.02 0.27 0.95 -0.72 -1.47
-0.01 0.08 0.32 0.3 -0.35 -0.54
-0.59 -0.11 0.09 0.63 0.04 -0.37
-0.02 0.07 0.01 0.64 -0.37 -0.67
-0.3 0.43 0.25 0.7 -0.81 -1.15
0.85 - - 2.07 - -
0.26 0.08 -0.24 0.45 -0.36 -0.42
-0.67 0.11 0.22 0.85 -0.51 -0.69
1.16 -0.71 -1.09 0.86 -1.04 -1.41
0.67 -0.04 -0.85 1.09 -1.45 -1.4
0.67 - 0.68 1.49 - -
0.82 0.93 -1.24 -0.24 -0.89 -0.96
0.64 0.07 -1.63 1.53 -3.27 -3.68
0.1 0.06 0.19 0.79 -0.77 -1.26
-0.06 -0.28 -0.2 0.88 -0.46 -0.37
0.97 -0.14 -1.72 1.31 -2.74 -2.23
1.57 1.6 - - - -
0.26 0.55 0.19 0.73 -1.74 -2.08
0.87 0.04 -0.53 0.73 -1.37 -1.27
- - 1.12 1.93 - -
0.88 0.3 -1.01 -0.22 -0.68 -0.08
0.63 - 0.98 1.31 - -
0.17 -0.19 -0.27 0.56 -0.25 -0.22
- - 1.1 0.72 -1.07 0.8
-0.2 0.12 0.08 0.81 -0.47 -0.96
0.1 0.29 0.16 0.41 -0.53 -0.82
-0.12 0.26 0.39 0.6 -0.63 -1.25
0.42 -0.21 -0.49 0.41 -0.18 -0.18
0.43 0.51 -0.62 -0.02 -0.41 -0.25
0.1 0.1 -0.15 1.05 -1.0 -1.38
0.39 0.92 -0.64 0.94 -2.67 -3.83
0.84 -0.45 -1.18 0.68 -0.45 -0.5
0.02 0.29 0.1 0.4 -0.51 -0.58
0.72 - - 1.71 - 0.12
0.03 0.13 0.27 0.5 -0.63 -0.69
0.58 -0.32 -0.9 1.05 -0.43 -1.49
0.02 -0.34 -0.13 0.55 -0.11 -0.17
0.58 0.05 -0.65 0.36 -0.51 -0.24
1.47 -0.61 - 0.38 -0.42 -0.89
-0.27 -0.13 0.02 0.88 -0.45 -0.57
-0.32 -0.07 0.16 0.8 -0.34 -0.75
0.59 -0.07 -0.47 0.62 -0.3 -1.06
0.35 -0.04 -0.3 0.42 -0.47 -0.17
-0.51 0.01 0.27 1.14 -0.92 -1.5
-0.39 0.06 0.26 0.55 -0.29 -0.48

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.