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Heatmap: Cluster_2 (HCCA clusters)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
2 h after light
6 h after light
10 h after light
14 h after light
18 h after light
2 h after dark
-2.05 -1.37 0.44 -0.0 0.12 0.95
- - - - - 2.58
- 0.73 1.02 - - 1.21
- - - - - 2.58
-0.88 0.29 0.12 -0.4 -0.03 0.49
- - - - 1.3 1.83
- 0.13 1.31 1.28 - -
-0.62 0.22 -0.49 - 0.34 1.14
0.29 0.07 -0.21 -0.3 0.09 -0.03
- 0.69 0.68 -0.08 -0.5 0.17
-1.53 -0.83 0.83 0.98 -0.74 -0.43
0.36 0.07 0.53 -1.03 -1.39 0.43
-0.95 -0.05 0.44 0.07 0.56 -0.63
-0.27 0.49 -0.42 -0.2 0.54 -0.51
- 1.32 - - - 1.81
- - 0.76 0.63 1.46 -
- -0.53 0.96 0.62 -0.06 -0.2
0.83 - - 1.0 - 1.15
-1.65 0.24 0.29 -0.89 -0.02 0.81
-0.41 0.29 -0.27 0.17 0.29 -0.25
-0.44 -0.03 -0.22 -0.08 0.01 0.55
0.04 0.38 -0.16 -0.21 -0.37 0.17
- 0.08 1.27 0.14 0.52 -
-0.66 0.34 0.31 -0.4 0.45 -0.45
-0.08 -0.43 -0.64 0.49 0.09 0.27
- - -0.06 0.09 0.08 1.55
- - 1.65 1.52 - -
-1.98 - 0.5 0.56 0.37 0.65
0.09 0.01 -0.31 0.11 -0.13 0.16
0.65 -1.15 -0.68 0.51 -0.5 0.3
- 0.43 0.84 -0.2 -0.3 0.23
- - 1.12 0.99 0.88 -
-0.16 -0.39 -0.2 0.15 0.07 0.39
0.06 -0.2 - 0.73 0.71 -0.33
-0.15 0.01 -0.38 0.84 0.2 -1.35
-0.07 -0.17 -0.53 -0.14 -0.02 0.66
- 0.65 0.93 1.09 -1.33 -
-1.47 -1.85 -0.41 0.94 0.65 0.18
-0.76 0.12 -0.45 0.02 0.58 0.1
0.3 -0.45 -2.63 - -0.77 1.72
-1.63 0.27 0.58 0.52 0.63 -
-2.79 -1.95 1.36 1.39 -2.07 -2.58
-1.94 0.39 0.0 1.46 -1.13 -2.17
-0.28 -1.1 0.38 0.01 -0.25 0.64
0.93 0.77 - - - 1.25
-1.72 -2.97 -0.81 - -1.16 2.19
0.9 - - - 0.85 1.22
-0.97 -0.35 -0.16 0.78 0.61 -0.83
- - - - - 2.58
-0.07 -0.29 -1.06 0.7 0.24 -0.09
0.91 0.11 -0.72 -0.68 -1.06 0.41
0.83 - - 1.0 - 1.15
- - - - 1.3 1.83
-1.39 0.27 0.09 -0.08 -0.12 0.56
- 0.17 1.29 - -0.0 0.53
- - 1.12 0.99 0.88 -
-0.07 -0.55 -0.02 0.62 -0.33 0.07
- - 0.56 1.44 - 0.86
0.0 0.41 -0.4 -0.31 -0.17 0.29
1.42 - - - - 1.73
- 0.45 0.44 - - 1.71
-0.73 0.11 -0.9 0.26 - 1.37
- 0.81 - 0.86 - 1.29
- 1.09 0.32 0.26 - 0.51
- 0.01 0.3 0.06 - 1.44
- - - 0.86 - 2.06
-1.31 0.08 0.17 0.4 -0.5 0.47
0.26 -0.07 -0.11 0.68 -1.15 -0.18
- - - - 1.02 1.99
0.56 0.4 -0.64 -0.4 0.18 -0.56
- - 0.83 - 0.79 1.32
0.1 0.06 -0.05 -0.13 -0.09 0.1
0.19 -0.23 -0.52 -0.16 0.02 0.49
-1.03 -0.25 -0.26 -0.11 0.8 0.23
-1.27 0.19 0.31 0.87 -0.23 -0.95
- - - - - 2.58
-0.71 -0.01 0.05 -1.38 -1.18 1.34
- - - 1.1 -0.01 1.52
-0.26 0.58 - 0.57 0.55 -0.49
-1.45 0.13 0.82 -0.19 0.07 -0.24
- 1.88 - - - 1.22
- - 0.61 - 0.26 1.71
- 1.54 -0.15 -0.09 - 0.34
-0.17 0.1 0.11 -0.02 -0.45 0.32
-0.13 0.08 -0.02 0.18 0.07 -0.21
-0.88 -0.53 -0.13 0.77 0.64 -0.77
0.16 -0.27 -0.01 -0.54 -0.73 0.82
0.55 1.05 -1.08 - - 1.0
0.31 0.02 -0.05 0.14 -0.72 0.1
-1.29 0.59 0.17 0.95 -0.56 -1.52
- - - - - 2.58
- - 1.65 1.52 - -
-0.49 -0.4 -1.65 0.83 -0.39 0.75
- - - 1.53 -0.43 1.24
-0.39 - -0.84 -2.39 - 2.17
- - 0.56 0.45 - 1.66
- 1.49 1.67 - - -
-1.4 0.12 0.04 -1.75 0.86 0.48
- - - - - 2.58
-1.12 - -1.3 1.24 -1.34 1.25
- 0.08 -0.62 -1.09 0.25 1.4
- -0.06 0.62 -0.19 -1.11 1.11
- - 0.95 0.82 1.2 -
-1.26 -1.26 -1.15 0.43 -0.14 1.3
-0.3 0.52 0.27 0.07 -0.24 -0.6

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.