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Heatmap: Cluster_39 (HCCA clusters)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
2 h after light
6 h after light
10 h after light
14 h after light
18 h after light
2 h after dark
-0.47 -0.42 0.36 0.91 0.11 -1.84
-1.86 0.29 0.51 0.5 0.02 -0.62
-0.05 -1.38 0.84 0.21 0.16 -0.78
0.38 0.13 1.09 0.05 -1.2 -
-0.56 0.23 0.6 0.48 -0.77 -0.62
0.1 0.04 0.42 0.02 -0.24 -0.51
-3.79 -0.58 1.68 0.81 -2.02 -4.47
-0.42 -0.25 0.3 0.46 0.06 -0.4
-0.05 -0.7 0.59 0.64 -0.31 -0.88
- - - 2.58 - -
-0.47 -1.32 0.23 1.04 -0.06 -0.54
-0.19 0.01 -0.05 0.2 0.1 -0.11
0.09 -0.08 0.38 0.19 -0.07 -0.74
-0.09 -0.1 0.03 0.19 0.0 -0.05
-0.31 -1.1 1.05 0.64 -0.79 -0.94
0.03 -0.45 -0.15 0.21 0.12 0.14
-0.26 -0.09 0.47 0.39 0.03 -0.99
-0.74 0.07 0.25 0.7 -0.03 -0.83
-0.26 0.18 0.58 0.76 -0.5 -2.85
-0.37 0.02 -0.32 0.39 0.2 -0.07
-4.09 -1.18 0.62 1.62 -0.83 -1.63
-1.27 -0.53 0.75 0.65 -0.03 -0.59
-1.85 -2.43 1.09 1.2 -0.11 -2.43
- - - 1.98 -0.19 0.23
-1.53 -0.63 0.64 1.31 -0.81 -1.33
-1.01 0.76 -0.09 0.66 -1.26 -0.19
0.14 -0.91 0.61 0.6 -0.11 -1.35
0.15 -0.82 0.59 1.02 -1.17 -1.53
-5.09 -4.55 0.46 2.1 -1.94 -6.41
- -0.69 -0.7 1.83 -0.74 -0.7
- - - 2.22 0.44 -
-0.11 -0.12 1.28 0.16 -1.34 -2.25
- 0.13 - 2.29 - -
-1.27 0.08 1.43 0.31 -0.73 -
-0.51 -0.43 0.11 0.6 0.07 -0.13
-0.04 -0.16 0.14 0.32 -0.05 -0.29
-0.19 0.08 0.63 0.38 -0.5 -0.97
- - - 2.58 - -
-0.71 -1.02 0.8 1.08 -0.81 -1.08
- - - 2.58 - -
-2.97 -0.7 0.86 1.29 -0.57 -1.63
- -2.34 -0.36 1.83 0.36 -2.35
-0.59 -0.58 0.78 0.78 -0.43 -1.05
-0.25 -0.28 -0.06 0.4 0.14 -0.07
- 0.77 - 1.57 -0.46 -0.77
0.15 -0.32 -0.14 0.2 -0.24 0.24
-0.46 -0.45 0.29 0.7 -0.12 -0.38
-0.27 -0.06 0.5 0.22 -0.22 -0.37
-1.46 0.59 0.67 0.6 -0.22 -2.63
0.22 -0.27 0.37 0.35 -0.23 -0.75
-0.3 -0.04 0.13 0.31 0.03 -0.21
-0.08 0.13 -0.06 -0.06 -0.06 0.11
-0.07 -0.38 0.09 0.25 0.06 -0.03
-2.38 -0.34 0.58 0.87 -1.0 0.26
-2.05 -0.85 0.39 1.04 -0.6 0.23
- - 1.35 0.56 0.99 -
-3.1 -0.87 0.76 0.9 0.05 -0.42
- - - 2.58 - -
0.26 - 1.94 -0.06 - -
- 0.79 - 1.81 -0.4 -
- - 0.61 1.71 0.26 -
-0.63 -1.73 1.11 0.45 0.08 -1.09
-2.92 0.09 0.07 1.18 -0.0 -1.04
-1.75 0.19 1.12 0.6 -0.52 -2.57
-0.48 -0.02 0.48 0.5 -0.22 -0.67
- - - 2.09 -0.29 -0.1
-0.53 - 1.37 1.08 - -0.7
-2.41 -0.2 0.51 0.82 -0.08 -0.3
- -3.16 -0.01 2.18 -2.01 -3.03
-0.12 -0.43 0.11 0.35 -0.11 0.07
-0.18 -0.56 0.52 0.68 -0.24 -0.84
-0.6 -0.85 0.78 0.93 -0.31 -1.5
-0.52 -0.75 0.44 0.65 -0.57 0.14
-0.9 -0.0 0.4 1.04 -0.57 -1.26
-1.71 -0.19 0.18 1.32 -0.84 -0.68
-0.4 -0.86 1.14 0.49 -0.86 -0.91
-0.04 -0.1 0.1 0.29 0.0 -0.32
-0.56 -1.03 0.33 1.03 -0.04 -0.86
-0.24 -0.72 0.0 0.68 -0.23 0.13
-0.62 0.16 0.7 0.45 -0.21 -1.43
-0.12 -0.23 0.31 0.54 -0.19 -0.59
-1.11 -0.92 1.31 -0.32 0.07 -0.57
-1.12 -0.25 1.06 0.62 -0.23 -2.1
- - - 2.58 - -
-0.54 -0.63 0.35 0.71 -0.0 -0.42
-1.13 -1.18 1.04 0.56 0.12 -1.04
-2.43 -0.15 0.93 0.94 -0.46 -1.48
-0.08 0.05 0.4 0.25 -0.35 -0.47
-0.4 -0.43 0.88 0.84 -1.09 -1.34
- - -0.03 2.33 - -
-0.62 -1.07 0.3 1.41 -0.44 -2.03
-0.33 -0.47 0.6 0.34 -0.27 -0.21
-0.67 -0.91 0.66 1.06 -0.18 -1.81
-0.42 -0.07 0.25 0.39 0.05 -0.38
-0.88 -1.07 0.4 0.87 -0.03 -0.23
0.2 -0.29 0.03 0.58 -0.01 -0.93
-0.28 -0.7 0.23 0.51 -0.11 0.06
-0.27 -0.27 0.22 0.53 0.09 -0.58
0.31 - 1.36 0.24 0.03 -
-1.41 -1.11 0.68 0.96 -0.3 -0.31
-0.2 -0.77 0.12 0.74 -0.12 -0.2
-0.32 -0.65 0.06 0.94 -0.06 -0.64
-0.18 -0.73 0.59 0.91 -0.91 -0.73
-1.38 -0.09 1.06 1.18 -2.13 -3.32
-0.03 -0.43 0.37 0.79 -0.49 -0.88
0.01 -0.55 0.47 0.7 -0.72 -0.53
-0.94 -1.01 1.04 0.89 -0.49 -1.46
-0.36 -0.03 0.34 0.45 -0.11 -0.55
-0.81 -0.12 0.73 0.48 -0.06 -1.01
- - 1.64 1.53 - -
-1.12 -0.37 0.5 0.72 -0.51 0.0
-1.09 0.14 0.54 0.69 -0.52 -0.59
-3.5 -0.78 0.55 1.52 -0.7 -1.37
0.02 0.2 0.41 -0.6 -0.18 -0.05
-1.12 -0.32 0.34 0.86 -0.21 -0.33
-1.6 -0.82 1.36 0.85 -1.17 -1.83
-1.51 -1.27 -0.11 1.39 0.05 -0.62
-0.24 -0.04 0.64 0.07 -0.3 -0.39
0.04 -2.07 0.63 0.95 0.08 -2.29
-0.25 -0.11 0.77 0.55 -0.55 -1.38
-0.42 -0.07 0.37 0.32 0.06 -0.49
0.19 0.18 0.59 0.04 -0.46 -1.11
-1.4 -2.01 1.01 1.03 0.02 -1.69
-1.89 -1.84 0.08 1.56 -0.32 -0.61
-1.89 0.24 0.88 0.8 -0.4 -2.25
-0.29 -0.88 0.26 0.8 -0.06 -0.42
-0.01 0.08 0.46 0.16 -0.13 -0.88
-1.07 -0.05 0.55 0.77 0.33 -2.93
-1.0 -1.5 0.59 0.9 0.56 -1.71
0.11 -0.09 0.41 0.54 -0.17 -1.69
0.03 -0.16 0.13 0.32 -0.12 -0.29
- - - 2.58 - -
-0.08 -0.11 0.16 0.36 0.04 -0.5
-0.35 -0.11 -0.13 0.27 0.27 -0.06
0.04 -0.72 -0.13 0.4 -0.32 0.42
-0.8 -1.16 1.0 1.07 -0.75 -1.82
- - 1.64 1.53 - -
-0.39 -0.41 0.37 0.66 0.07 -0.83
0.18 0.2 0.29 -0.11 -0.27 -0.46
- - - 1.98 -0.18 0.24
-2.99 -0.41 1.08 1.09 -0.59 -2.23
-1.57 0.15 -0.75 0.53 0.2 0.45
-0.56 -0.35 1.38 0.12 -0.6 -2.47
-1.29 -0.26 -0.22 0.93 0.01 -0.02
-0.06 -0.15 0.32 0.38 0.21 -1.19
-2.46 -0.96 0.55 1.19 0.45 -2.41
-0.35 -0.52 0.79 0.38 -0.05 -0.93
-0.11 -0.56 0.19 0.79 -0.36 -0.42
-0.05 -0.32 0.39 0.84 -0.48 -1.27
-1.06 -1.64 -0.56 1.72 -0.76 -0.64
- -0.09 - 2.34 - -
-0.88 -0.55 0.66 0.89 -0.59 -0.55
-0.33 -0.03 0.15 0.78 -0.31 -0.75
-0.2 - 0.82 1.18 - 0.14
-0.55 -0.94 -0.0 1.0 -0.17 -0.15
-0.13 -0.41 0.07 0.42 0.41 -0.7
-0.74 0.31 0.15 0.94 -0.11 -2.26
-2.93 -4.16 1.64 1.36 -3.04 -
- 0.13 - 1.47 1.09 -
-1.8 0.44 1.13 0.56 -0.7 -3.65
- 0.34 -1.03 1.62 -0.81 -0.74
-0.29 -0.54 0.14 0.63 0.18 -0.49
-0.72 0.08 0.66 0.65 -0.43 -1.19
-2.07 -2.11 1.2 1.35 -1.25 -1.91
-0.25 -0.04 0.28 0.94 -0.77 -1.12
-1.4 -1.75 1.28 0.98 -1.42 -0.88
-0.29 -0.27 0.14 0.3 0.14 -0.14
- - -0.53 1.49 0.75 -0.3
-0.75 -0.09 0.31 0.95 -0.34 -0.99
-0.14 -0.32 0.2 0.42 0.05 -0.39
-0.21 -0.37 0.78 1.4 - -
- - 0.61 1.71 0.26 -
-0.35 -1.13 0.83 0.65 -0.67 -0.36
-0.8 0.12 0.71 0.13 0.31 -1.41
-0.4 - 1.1 0.49 -0.27 -0.2
-3.74 -1.67 0.45 1.84 -0.76 -3.67
-1.07 -0.66 0.21 1.31 -0.6 -0.76

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.