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Heatmap: Cluster_12 (HCCA clusters)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
2 h after light
6 h after light
10 h after light
14 h after light
18 h after light
2 h after dark
0.38 -1.02 0.22 0.13 -0.18 0.09
-2.63 0.19 1.0 0.5 0.13 -2.42
0.65 0.05 -1.02 - 0.97 -0.07
- - 1.14 - 0.1 1.44
0.47 - 1.09 0.37 0.26 -
0.91 -0.59 0.23 -0.62 -0.91 0.14
1.67 - - - - 1.5
0.04 -1.21 0.42 -0.9 0.45 0.37
0.62 0.08 -1.05 -0.2 0.36 -0.38
0.32 - - - -0.04 1.92
0.35 0.05 0.48 -0.08 -0.16 -1.11
1.07 - 0.9 - 1.02 -
-0.09 -0.06 0.16 -0.23 -0.37 0.45
- - 1.61 - 1.56 -
- - 2.58 - - -
-1.45 -1.34 1.24 -1.18 0.01 0.52
1.61 - - - 1.56 -
0.91 - 0.49 - 1.44 -
0.85 0.25 0.12 -0.67 -0.66 -0.61
-0.48 0.51 0.16 0.14 0.04 -0.71
0.82 - 1.43 - 0.61 -
0.78 0.89 -1.19 0.15 -0.21 -
- - 1.6 - 1.57 -
1.02 0.39 -1.21 -0.48 0.35 -2.09
-0.62 -0.14 0.05 0.28 0.46 -0.29
- - 1.58 - - 1.59
1.25 - 1.86 - - -
-0.67 0.2 0.21 0.26 0.31 -0.68
-0.33 0.66 0.1 -1.53 0.8 -1.11
1.9 - 0.12 - 0.25 -
- - 2.28 0.21 - -
0.23 -0.08 0.13 -0.18 0.06 -0.23
-0.06 -0.33 1.1 -0.29 -0.84 -0.48
- - 1.58 - - 1.59
0.94 - 1.21 - -0.11 -0.23
-0.46 -0.63 0.19 0.43 0.39 -0.29
1.64 - 0.47 - 0.59 -
- - 0.54 - 1.5 0.78
1.67 - - - - 1.5
-0.16 - 1.52 -0.29 -0.08 -1.05
1.25 -0.59 -0.6 - 0.52 -0.23
- - 1.66 - - 1.51
- - 1.58 - - 1.59
1.67 - 1.5 - - -
0.45 0.09 -0.22 -0.29 0.18 -0.39
0.28 -0.21 -0.11 0.43 0.45 -1.83
0.75 1.2 -1.08 - 0.63 -
-0.25 -0.34 -0.16 -0.13 0.03 0.62
-0.28 -0.03 -0.03 -0.07 -0.16 0.46
1.12 -0.31 -0.71 - 0.34 0.2
- - 1.61 - 1.56 -
0.72 - 0.55 - 0.51 0.55
0.64 - -0.67 -0.49 0.81 0.43
0.05 0.29 -0.08 -1.66 0.2 0.42
0.28 -0.54 0.98 -0.17 0.23 -3.82
-2.73 -0.37 0.78 0.34 -1.04 0.68
- - 1.61 - 1.56 -
- - 1.61 - 1.56 -
-0.45 - 1.69 - 1.03 -
0.24 -0.91 -0.03 -0.28 0.36 0.27
0.12 -0.04 0.06 -0.09 0.17 -0.24
-0.53 -0.79 0.25 -0.48 1.5 -
- - 1.46 - - 1.7
0.66 - 1.48 - 0.7 -
-0.37 -0.35 0.8 0.07 -0.17 -0.4
0.9 0.05 0.56 0.17 - -1.02
0.21 0.02 -0.33 -0.4 0.43 -0.1
0.71 -0.29 -0.58 -1.26 - 1.3
-0.07 - 0.51 -0.34 0.96 -0.17
0.81 - 1.42 - - 0.65
0.25 -0.81 1.36 -0.68 0.06 -
0.07 -0.07 0.05 -0.11 0.04 0.01
0.15 - 0.14 - 0.1 1.44
-0.08 -1.04 1.21 -1.42 -0.24 0.05
1.13 - 0.95 - 0.91 -
1.67 - 0.5 - - 0.5
- - 1.61 - 1.56 -
0.35 0.18 1.18 0.41 - -
-1.61 -0.48 1.14 0.56 0.36 -
-0.88 0.1 1.27 -0.98 - 0.54
0.69 -0.1 -0.76 -0.9 0.35 0.07
0.12 -0.92 0.54 0.87 0.14 -
0.37 -1.04 0.56 0.18 -0.25 -0.38
0.64 0.75 0.47 - - 0.47
-0.19 -0.35 2.12 - - -
1.67 - 1.5 - - -
-0.19 0.08 0.45 0.12 0.02 -0.74
1.13 0.24 - - 1.39 -
-0.48 - 0.35 - 0.31 1.47
0.82 - -0.35 - -0.39 1.42
0.45 0.41 1.06 - - 0.28
1.11 - 0.94 - - 0.94
1.67 - 1.5 - - -
-0.15 0.48 0.48 -0.83 0.63 -2.32
1.34 - 1.17 - 0.29 -
0.21 - 1.98 - -0.15 -
1.65 - - - 1.52 -
1.67 - 1.5 - - -
0.21 -0.39 0.1 0.33 0.02 -0.45
0.1 0.81 0.34 -0.82 -0.05 -1.37
0.64 0.75 0.47 - - 0.47
-0.07 -0.15 0.31 0.1 0.22 -0.56
-0.45 -0.83 1.16 -0.77 -0.4 0.17
1.59 - 1.58 - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.