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Heatmap: Cluster_18 (HCCA clusters)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
2 h after light
6 h after light
10 h after light
14 h after light
18 h after light
2 h after dark
-1.03 1.0 - - 0.08 1.3
0.17 0.86 -0.72 -0.12 -0.22 -0.56
- -0.08 - 1.68 -0.13 -0.08
- 1.92 - 1.15 - -
-1.43 0.39 0.13 0.96 -0.71 -0.59
-2.68 0.98 -0.23 0.72 -0.29 -0.85
-1.28 -0.44 -0.35 0.4 1.25 -1.44
0.05 0.91 -0.35 0.39 -1.16 -0.9
-0.88 0.62 -1.13 0.89 -0.1 -0.58
- - - 1.72 1.44 -
- 1.46 - 1.7 - -
-0.73 0.34 0.45 -0.28 -1.03 0.53
- 1.0 - - - 2.0
-0.41 -0.06 -0.67 0.53 0.12 0.19
-0.75 -0.02 -0.38 0.18 0.36 0.31
0.82 -1.01 0.3 0.68 - -0.14
- - - 1.15 - 1.92
- 0.72 - 1.49 -0.47 -0.28
- 1.31 - -0.71 0.19 0.82
-2.39 -0.16 -1.02 1.2 0.12 0.04
- 1.59 - - - 1.58
- 0.53 - 0.77 0.49 0.53
- 0.39 -0.28 1.39 -0.01 -1.97
-0.33 0.31 -0.0 0.29 0.18 -0.69
- - -12.7 1.62 -9.72 1.55
-2.18 1.38 0.1 0.58 -1.25 -2.37
-1.61 -0.6 0.15 0.85 0.4 -0.35
-1.72 1.49 - 0.2 -1.14 0.37
-1.06 0.03 0.72 0.37 -0.51 -0.23
-0.02 -0.25 - - -0.3 1.75
- 1.0 - 1.08 -0.11 -0.07
- - - 1.71 0.43 0.47
-0.56 0.24 0.25 0.52 0.13 -1.25
-0.69 0.32 0.16 0.35 -0.48 0.03
- 1.46 - 1.7 - -
- 0.44 -1.2 1.31 -0.24 -0.19
-0.1 - - 0.75 0.96 0.52
-0.81 0.51 0.07 0.54 -0.81 -0.12
- 0.82 -0.18 1.24 -0.0 -
- - - 1.72 1.44 -
- - - 1.72 1.44 -
-0.65 0.65 -0.32 0.8 -0.23 -1.29
- 0.5 - 0.24 -0.05 1.28
- 0.47 0.32 1.09 - 0.32
- 0.63 0.21 0.81 0.63 -
- 1.59 - - - 1.58
-1.02 0.08 -0.42 0.41 0.63 -0.26
- 0.74 - 0.51 1.54 -
- -0.32 -0.33 1.49 - 0.67
- 0.69 -0.43 0.94 0.03 -0.51
- 1.59 - - - 1.58
- 1.92 - 1.15 - -
- 1.46 - 1.7 - -
-1.93 0.8 -1.41 0.01 -0.54 0.95
- 1.46 - 1.7 - -
-0.7 -0.23 0.5 0.12 0.08 -0.04
- 0.15 - 1.65 -1.04 0.34
-0.01 0.45 -1.22 -1.16 -0.97 1.17
- 0.25 0.24 0.48 0.06 0.25
-0.74 0.06 -1.03 0.81 0.47 -0.44
0.24 0.67 1.04 0.23 - -
- 0.57 - 0.8 0.38 0.56
-0.41 -0.47 0.07 0.34 0.09 0.2
- -0.45 1.0 1.1 -0.91 -0.72
0.25 -0.01 -0.21 0.07 0.04 -0.19
- 1.46 - 1.7 - -
- - - 1.21 0.78 0.97
- - - 1.72 1.44 -
-0.49 0.85 - - -1.02 1.58
-1.4 0.16 0.12 0.33 -1.44 0.84
- 0.81 0.31 1.03 -0.55 -1.79
- - - 1.7 - 1.46
- 1.48 - 0.68 0.68 -
- - - 1.7 - 1.46
-0.44 0.92 0.42 0.57 -0.86 -
- 1.46 - 1.7 - -
-0.3 0.08 -0.29 0.58 0.13 -0.47
- 0.92 0.08 1.07 - -0.08
- - - 1.71 0.43 0.47
- 1.59 - - - 1.58
- 1.58 1.08 -0.18 - -
- 1.46 - 1.7 - -
-1.53 -0.22 0.34 0.93 0.24 -1.17
-0.78 0.4 0.5 -0.89 0.92 -2.04
0.29 -0.19 -0.4 0.02 -0.16 0.3
- 0.5 - 1.34 1.04 -
- 0.93 - 1.17 0.88 -
- - - 1.7 - 1.46
- 0.53 0.52 0.76 - 0.52

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.