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Heatmap: Cluster_2 (HCCA clusters)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
4 h after light
8 h after light
12 h after light
4 h after dark
8 h after dark
12 h after dark
-0.38 -0.81 0.05 0.13 0.5 0.17
- - -0.58 0.7 1.89 -
-0.55 -0.85 -0.74 0.35 0.67 0.38
- - - - 2.58 -
-0.12 -0.44 0.01 0.19 0.25 0.02
-1.1 -0.4 0.44 0.19 0.1 0.26
-0.35 -1.24 0.2 0.3 0.35 0.19
-0.5 -0.99 0.01 0.28 0.7 -0.07
-1.76 -0.87 0.45 0.67 0.76 -1.0
-0.41 -1.1 0.34 0.34 0.72 -0.74
-0.75 -1.54 -2.55 0.31 1.53 -0.41
-1.72 -1.49 -0.73 0.21 1.32 0.13
-0.59 -0.92 0.04 0.42 0.56 -0.05
0.06 -0.87 -0.48 0.06 0.86 -0.25
-0.56 -1.51 0.43 -0.67 1.33 -1.07
0.12 -1.9 -3.39 -0.05 1.46 -0.28
-0.03 -3.13 -0.31 0.14 1.1 -0.21
-1.11 - 0.24 0.01 1.22 0.02
-0.35 -1.3 -0.22 0.5 0.59 0.04
-0.5 -1.79 -0.37 0.59 0.98 -0.4
-0.42 -0.88 0.19 0.02 1.02 -0.92
-0.31 -0.72 -0.1 0.23 0.41 0.21
-0.26 -0.94 -0.28 0.45 0.59 -0.09
- - - - 2.58 -
- - - - 2.58 -
-0.35 -0.81 0.11 0.37 0.51 -0.24
-0.78 -1.64 0.17 0.52 1.14 -1.54
-0.19 -1.55 0.05 0.34 0.51 0.07
- - - - 2.58 -
- - - - 2.58 -
-0.82 -1.15 0.01 0.74 0.59 -0.31
-0.75 -0.78 0.12 -0.35 1.33 -1.2
-1.34 -1.0 0.58 0.1 0.95 -0.72
-1.5 -0.48 0.4 0.3 0.82 -0.71
-0.98 -0.62 -0.67 0.11 1.02 0.15
-0.19 -0.45 -0.16 0.07 0.67 -0.22
- - - - 2.41 -0.54
-0.46 -0.91 0.26 0.23 0.86 -0.82
-0.67 -1.24 0.26 0.4 0.86 -0.7
-0.38 -0.78 -0.06 0.38 0.58 -0.15
-1.09 -1.22 0.12 0.68 0.71 -0.36
-0.08 -0.57 -0.08 0.02 0.8 -0.54
-0.63 -0.28 0.12 0.03 0.3 0.25
-1.11 -0.32 0.21 0.15 0.49 0.09
-1.25 -0.17 -0.39 0.46 0.75 -0.2
-0.2 -1.17 -1.41 -0.09 1.17 0.16
-0.27 -3.95 -0.4 0.36 1.13 -0.2
- - - - 2.58 -
-0.53 -0.41 0.46 0.17 -0.15 0.2
-0.99 -0.53 0.22 0.34 0.56 -0.16
-0.81 -0.63 -1.19 -0.16 1.42 -0.39
-1.09 -0.37 -0.3 0.57 0.66 -0.18
-0.36 -0.33 -0.22 0.07 0.68 -0.13
-0.3 -0.36 0.33 0.25 0.22 -0.33
-0.8 -2.7 -0.67 0.69 1.28 -0.71
-0.7 -0.62 -0.25 0.47 0.65 -0.08
- -1.17 0.68 0.44 0.5 0.25
- - - 0.69 1.99 -1.26
-2.1 -1.35 0.2 0.74 0.68 -0.07
-1.33 -2.61 -1.48 0.91 1.52 -1.57
-1.16 -1.65 -0.63 0.85 1.02 -0.42
-0.45 -0.62 -0.21 0.12 0.81 -0.13
-0.75 -0.32 0.04 -0.11 0.72 -0.0
-1.55 - -1.0 0.42 1.46 0.1
-0.19 -0.77 -0.09 0.27 0.45 0.02
-1.37 -1.07 -0.81 -0.28 1.67 -0.87
-2.09 -1.84 0.6 0.7 0.82 -0.77
-2.09 -1.84 0.6 0.7 0.82 -0.77
-0.83 -0.7 -1.06 0.53 1.03 -0.22
-2.47 -0.66 0.0 0.21 1.46 -1.78
- - - - 2.58 -
-0.75 -1.19 -1.38 -0.95 1.76 -0.55

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.