Heatmap: Cluster_5 (HCCA clusters)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
1 h after light
3 h after light
5 h after light
7 h after light
9 h after light
11 h after light
13 h after light
15 h after light
1 h after dark
3 h after dark
5 h after dark
7 h after dark
-1.7 -0.75 -0.49 -0.17 0.21 0.25 -0.03 0.52 0.22 0.38 0.36 -0.02
-2.07 -1.0 -0.8 -0.26 0.08 0.17 0.19 0.61 0.4 0.39 0.31 0.18
-2.87 -1.09 -0.68 -0.38 0.5 -0.18 -0.03 0.57 -0.43 0.46 1.05 0.08
-0.58 -0.25 -0.22 -0.01 0.05 -0.41 -0.29 0.57 0.21 0.33 0.37 -0.23
-3.22 -0.96 -0.57 -0.45 0.28 -0.14 0.13 0.85 0.05 0.38 0.71 -0.03
-3.3 -1.06 -0.72 -0.28 0.46 -0.15 -0.02 0.49 -0.22 0.64 0.9 0.06
-1.56 -0.55 -0.52 -0.3 0.2 -0.05 0.08 0.48 0.15 0.47 0.54 -0.06
-1.62 -0.74 -0.57 -0.03 0.06 -0.13 -0.01 0.62 0.31 0.39 0.44 0.05
-1.28 -0.25 -0.33 -0.65 0.39 -0.6 -0.04 0.69 -1.03 0.2 1.1 -0.03
-1.02 -0.41 -0.56 -0.33 0.21 -0.4 -0.08 0.68 -0.25 0.3 0.81 0.01
-0.15 -0.13 0.01 -0.02 0.03 -0.28 -0.53 0.13 0.22 0.34 0.12 0.07
-0.24 -0.13 -0.08 -0.01 0.14 -0.29 -0.79 0.27 0.12 0.33 0.26 0.09
-2.35 -0.52 -1.11 -0.58 0.35 -0.19 -0.15 0.57 0.12 0.48 0.84 0.22
-3.3 -1.14 -0.92 -0.39 0.38 -0.5 0.46 0.6 -0.5 0.58 0.82 0.36
-4.02 -1.39 -0.95 -0.28 0.45 -0.27 0.24 0.52 -0.17 0.62 0.8 0.3
-3.09 -0.96 -0.77 -0.26 0.41 -0.34 0.16 0.53 -0.1 0.53 0.79 0.23
-1.76 -0.97 -0.82 -0.44 0.52 -0.07 0.01 0.47 -0.39 0.53 0.87 0.1
-1.37 -0.37 -0.87 -0.4 0.4 -0.49 -0.08 0.54 -0.53 0.62 0.96 -0.12
-3.15 -0.74 -0.67 -0.33 0.12 -0.49 -0.65 0.86 -0.21 0.72 1.26 -0.52
-1.41 -0.45 -0.49 -0.59 0.4 -0.37 -0.11 0.53 -0.49 0.58 0.84 0.06
-1.12 -0.65 -0.6 -0.35 0.12 -0.03 0.01 0.52 0.16 0.48 0.47 0.08
-1.28 -0.49 -0.66 -0.65 0.51 -0.45 -0.04 0.46 -0.75 0.48 1.05 0.06
-1.31 -0.51 -0.81 -0.72 0.31 -0.45 -0.01 0.78 -0.45 0.41 0.99 -0.03
-1.51 -0.63 -0.75 -0.48 0.21 -0.18 0.01 0.71 0.0 0.5 0.69 -0.03
-2.22 -0.4 -0.81 -0.81 0.33 -0.32 -0.02 0.32 -0.14 0.63 0.91 0.33
-1.12 -0.58 -0.64 -0.43 0.15 -0.31 0.05 0.75 -0.09 0.41 0.62 0.07
-1.16 -0.47 -0.75 -0.59 0.22 -0.33 0.05 0.74 -0.21 0.34 0.85 -0.05
-0.83 -0.15 -0.39 -0.15 0.06 -0.49 -0.18 0.37 -0.1 0.34 0.67 0.2
-0.62 -0.3 -0.28 -0.14 0.05 -0.34 -0.09 0.28 0.08 0.24 0.54 0.19
-1.13 -0.56 -0.91 -0.68 0.25 -0.24 -0.08 0.47 -0.03 0.49 0.82 0.26
-1.75 -0.69 -0.58 -0.34 0.16 -0.09 0.16 0.63 0.1 0.48 0.59 -0.1
-1.38 -0.6 -0.66 -0.5 0.39 -0.39 0.01 0.53 -0.16 0.31 0.75 0.34
-1.95 -1.96 -1.35 -0.8 0.04 -0.11 0.33 1.01 0.17 0.65 0.75 -0.15
-1.72 -1.81 -0.9 -1.0 0.36 -0.22 0.36 1.06 -0.51 0.47 0.96 -0.27
-1.56 -0.21 -0.5 -0.42 0.51 -0.4 -0.3 0.18 -0.54 0.45 0.89 0.38
-1.45 -0.05 -0.34 -0.46 0.37 -0.57 -0.26 0.25 -0.63 0.49 0.97 0.19
-0.56 0.29 -0.21 0.14 -0.07 -0.32 -0.4 -0.15 0.24 0.45 0.17 0.07
-0.72 -0.57 -0.66 -0.41 0.07 -0.29 -0.01 0.61 0.02 0.44 0.66 -0.01
-1.82 -0.54 -0.71 -0.22 0.36 -0.19 -0.01 0.52 -0.34 0.43 0.87 -0.0
-1.76 -0.78 -0.62 -0.29 0.15 -0.04 0.17 0.51 0.18 0.55 0.5 0.01
-2.94 -0.56 -0.46 -0.12 0.25 -0.15 0.12 0.83 0.07 0.28 0.58 -0.25
-1.17 -0.41 -0.66 -0.63 0.34 -0.39 -0.19 0.56 -0.4 0.58 0.86 0.11
-1.17 -0.58 -0.58 -0.39 0.29 -0.11 -0.11 0.56 -0.04 0.41 0.66 0.04
-1.27 -0.55 -0.46 -0.35 0.12 0.27 -0.03 0.44 0.33 0.29 0.33 0.04
-2.62 -1.2 -0.62 -0.16 0.05 -0.27 0.02 0.82 0.34 0.45 0.7 -0.07
-2.42 -1.18 -0.61 -0.16 0.19 -0.73 -0.06 0.97 0.11 0.48 0.78 -0.05
-0.33 -0.27 -0.57 -0.33 0.14 -0.38 -0.12 0.51 -0.05 0.34 0.5 0.07
-2.9 -1.59 -0.73 -0.27 0.24 -0.02 0.12 0.57 0.21 0.59 0.73 0.07
-0.91 -0.62 -0.61 -0.3 0.02 -0.12 0.05 0.54 0.15 0.42 0.52 0.06
-1.01 -0.29 -0.62 -0.51 0.3 -0.49 -0.24 0.6 -0.59 0.35 1.03 0.06
-1.46 -0.63 -0.59 0.04 -0.2 -0.21 -0.31 0.66 0.19 0.5 0.76 -0.09
-0.54 -0.53 -0.44 -0.33 0.04 0.08 0.03 0.43 0.19 0.32 0.33 -0.01
-1.61 -0.66 -0.74 -0.52 0.07 -0.56 0.18 0.51 -0.24 0.46 1.0 0.31
-0.89 -0.6 -0.53 -0.33 -0.0 -0.08 0.05 0.58 0.18 0.33 0.51 0.03
-0.96 -0.35 -0.62 -0.48 0.26 -0.48 -0.08 0.67 -0.52 0.32 0.95 0.0

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.