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Heatmap: Cluster_13 (HCCA clusters)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
1 h after light
3 h after light
5 h after light
7 h after light
9 h after light
11 h after light
13 h after light
15 h after light
1 h after dark
3 h after dark
5 h after dark
7 h after dark
-0.6 -1.0 -0.97 -1.43 -0.57 0.23 0.41 0.67 0.56 0.6 0.36 -0.13
-0.56 -1.26 -1.06 -1.8 -0.52 0.3 0.72 0.76 0.62 0.46 0.23 -0.37
-1.33 -1.51 -1.07 -1.19 -0.6 0.3 0.6 0.86 0.59 0.6 0.33 -0.26
-1.83 -2.21 -3.16 -2.47 -1.42 0.05 1.06 1.1 0.66 0.93 0.44 -0.43
-0.22 -0.28 -0.4 -0.36 -0.09 0.1 0.15 0.3 0.37 0.3 0.04 -0.19
-0.19 -0.93 -1.51 -1.7 -0.49 0.28 0.58 0.63 0.59 0.45 0.26 -0.14
-0.46 -1.5 -2.16 -3.43 -1.39 0.03 0.77 0.86 0.93 0.69 0.29 -0.09
-0.54 -0.26 -0.23 -0.3 -0.0 0.18 0.23 0.24 0.22 0.36 -0.09 -0.09
-1.21 -0.77 -0.59 -0.92 -0.22 0.38 0.35 0.6 0.5 0.47 0.13 -0.09
-0.27 -0.95 -1.52 -1.39 -0.74 -0.12 0.28 0.8 0.56 0.67 0.46 0.02
-0.71 -0.73 -1.1 -1.41 -0.33 0.16 0.38 0.61 0.57 0.7 0.19 -0.05
-0.99 -1.05 -0.74 -1.16 -0.36 0.28 0.5 0.76 0.53 0.42 0.32 -0.25
0.09 -0.71 -0.91 -2.05 -0.22 0.32 0.85 0.45 0.51 0.49 -0.35 -0.58
-0.98 -1.04 -0.76 -0.99 -0.46 0.3 0.69 0.6 0.62 0.56 0.09 -0.42
-1.15 -0.98 -0.79 -0.8 -0.39 0.28 0.37 0.59 0.57 0.68 0.29 -0.32
-0.41 -0.36 -0.34 -0.51 -0.03 0.15 0.2 0.38 0.44 0.29 0.01 -0.23
-0.68 -1.01 -1.14 -1.71 -0.54 0.21 0.43 0.76 0.36 0.5 0.59 0.05
-0.64 -0.44 -0.35 -0.41 -0.22 0.24 0.42 0.46 0.34 0.35 -0.01 -0.34
-0.77 -1.01 -1.1 -1.27 -0.45 -0.04 0.37 0.76 0.78 0.78 0.13 -0.3
-0.96 -1.24 -1.37 -1.2 -0.85 0.31 0.7 1.06 0.48 0.32 0.29 -0.2
-0.1 -0.47 -0.59 -0.88 -0.24 0.12 0.43 0.32 0.47 0.34 0.11 -0.19
-0.81 -1.4 -1.02 -1.53 -0.59 0.45 0.76 0.88 0.63 0.4 0.05 -0.44
-0.16 -1.04 -1.75 -1.62 -0.95 0.15 0.57 0.75 0.93 0.73 0.12 -0.86
-0.02 -0.82 -1.49 -1.92 -1.08 -0.03 0.47 0.8 0.7 0.75 0.19 -0.32
-0.82 -0.47 -0.19 -0.46 -0.31 0.14 0.4 0.64 0.56 0.44 -0.21 -0.68
-0.73 -0.62 -0.26 -0.53 -0.36 0.21 0.61 0.56 0.55 0.43 -0.27 -0.63
-1.36 -1.14 -0.53 -1.08 -0.39 0.41 0.24 0.37 0.75 0.71 0.28 -0.17
-1.49 -2.58 -2.91 -3.19 -1.27 0.42 0.9 1.26 0.95 0.7 0.14 -0.8
-0.78 -1.4 -1.74 -2.14 -1.05 0.08 0.54 0.87 0.7 0.66 0.45 0.17
-0.67 -1.69 -2.7 -1.94 -1.56 -0.19 0.67 0.77 0.8 0.85 0.43 0.32
-0.37 -0.88 -0.64 -0.92 -0.6 0.06 0.39 0.48 0.54 0.57 0.29 -0.09
-0.24 -0.49 -0.94 -0.97 -0.32 0.11 0.19 0.56 0.43 0.48 0.28 -0.06
-0.04 -0.93 -1.92 -2.81 -1.0 0.07 0.58 0.63 0.88 0.8 0.09 -0.22
-0.35 -0.87 -0.63 -1.45 -0.97 0.11 0.58 0.77 0.63 0.48 0.25 -0.43
-0.13 -0.53 -0.94 -1.92 -1.07 -0.09 0.42 0.84 0.5 0.37 0.41 0.04
-0.6 -0.68 -0.66 -1.12 -0.22 0.22 0.45 0.65 0.55 0.27 0.2 -0.25
-0.75 -0.73 -0.62 -0.82 -0.48 0.21 0.49 0.71 0.56 0.49 0.15 -0.55
-0.68 -0.92 -0.78 -0.93 -0.34 0.23 0.4 0.5 0.5 0.58 0.24 -0.07
-0.19 -0.65 -0.94 -1.73 -0.74 0.06 0.62 0.76 0.6 0.39 0.14 -0.21
-0.82 -0.58 -0.42 -1.01 -0.36 -0.09 -0.02 0.76 0.46 0.34 0.54 0.03
-0.64 -0.54 -0.65 -0.94 -0.63 0.1 0.14 0.73 0.49 0.32 0.46 0.01
-0.19 -0.5 -0.54 -0.65 -0.21 0.12 0.21 0.52 0.34 0.34 0.18 -0.17
-0.44 -0.48 -0.69 -0.7 -0.14 0.22 0.34 0.45 0.27 0.37 0.19 -0.05
0.22 -0.06 -0.25 -0.53 -0.22 0.1 0.31 0.06 0.24 0.12 -0.11 -0.09
-0.73 -0.71 -0.52 -0.68 -0.35 0.2 0.56 0.69 0.44 0.19 0.2 -0.34
-0.32 -0.75 -1.83 -1.69 -0.35 0.34 0.44 0.66 0.71 0.69 0.08 -0.47
-1.1 -0.87 -0.57 -1.26 -0.55 0.35 0.61 0.75 0.64 0.6 -0.0 -0.66
-0.22 -0.25 -0.1 -0.49 -0.17 0.14 0.22 0.37 0.24 0.19 -0.02 -0.15
-0.23 -0.35 -0.61 -0.98 -0.33 0.14 0.38 0.68 0.36 0.24 0.12 -0.25
-0.49 -0.55 -0.48 -0.69 -0.33 0.2 0.41 0.47 0.48 0.39 -0.02 -0.11
-0.85 -1.66 -1.16 -1.63 -0.49 0.32 0.68 0.77 0.67 0.59 0.16 -0.17
-0.56 -0.62 -0.62 -0.52 -0.44 0.26 0.4 0.77 0.46 0.15 0.1 -0.31
-0.26 -1.26 -1.76 -2.64 -1.43 -0.02 0.52 0.85 0.75 0.81 0.44 -0.12
-3.38 -2.68 -2.81 -1.97 -0.85 0.53 1.08 1.05 0.92 0.72 -0.0 -0.66
-0.03 -0.49 -1.21 -1.88 -0.85 0.06 0.41 0.59 0.61 0.67 0.26 -0.21
-0.04 -0.6 -0.66 -1.22 -0.44 0.21 0.5 0.71 0.55 0.18 0.03 -0.45
-1.15 -0.95 -0.68 -0.98 -0.63 0.31 0.73 0.8 0.82 0.55 -0.17 -1.01
-0.45 -0.85 -0.78 -1.03 -0.5 0.43 0.82 0.72 0.61 0.24 -0.24 -0.67
0.06 -0.49 -1.14 -1.87 -0.88 -0.03 0.4 0.78 0.58 0.62 0.21 -0.37
-3.5 -2.66 -3.98 -2.09 -0.6 0.67 0.77 1.04 0.83 0.79 0.28 -0.48
-0.45 -0.32 -0.33 -0.48 -0.27 0.09 0.36 0.43 0.5 0.33 -0.05 -0.34
-0.13 -0.79 -1.48 -2.84 -0.92 0.17 0.48 0.76 0.61 0.68 0.21 -0.05
-0.12 -0.3 -0.51 -1.02 -0.51 0.01 0.47 0.7 0.47 0.18 0.09 -0.38
-0.26 -1.16 -1.23 -3.09 -1.54 -0.06 0.41 0.96 0.75 0.56 0.6 -0.1
-0.32 -0.64 -0.93 -1.15 -0.49 0.05 0.37 0.77 0.45 0.41 0.38 -0.24
-0.7 -1.81 -2.22 -2.86 -0.91 0.27 0.81 0.87 0.71 0.63 0.4 -0.13
0.3 -0.86 -2.0 -3.26 -1.52 0.03 0.6 0.91 0.63 0.53 0.29 -0.18
-1.15 -1.68 -1.19 -1.88 -1.15 0.08 0.53 0.43 0.97 0.93 0.48 -0.03
-0.31 -1.44 -2.0 -3.41 -1.59 0.09 0.51 0.75 0.76 0.87 0.43 0.15
-0.65 -1.45 -1.88 -3.49 -1.78 -0.03 0.43 1.01 0.62 0.76 0.77 0.1
-0.46 -0.65 -0.59 -0.81 -0.3 0.16 0.39 0.6 0.46 0.44 0.11 -0.25
-0.51 -0.32 -0.26 -0.37 -0.06 0.31 0.39 0.41 0.36 0.25 -0.23 -0.46
-0.38 -0.38 -0.45 -0.92 -0.27 0.4 0.39 0.67 0.53 0.38 -0.29 -0.79
-0.42 -0.69 -0.84 -1.25 -0.53 0.13 0.48 0.81 0.54 0.36 0.22 -0.29
0.1 -0.46 -1.32 -2.09 -0.99 -0.17 0.24 0.68 0.65 0.62 0.24 0.14
-1.26 -1.15 -0.81 -0.86 -0.45 0.35 0.54 0.81 0.52 0.35 0.35 -0.32
-0.3 -0.76 -1.68 -1.83 -0.67 0.16 0.56 0.76 0.64 0.54 0.26 -0.22
-1.7 -1.05 -0.98 -1.09 -0.29 0.57 0.91 1.11 0.72 0.41 -0.79 -1.56
-0.65 -0.49 -0.3 -0.92 -0.35 0.17 0.56 0.57 0.44 0.24 0.1 -0.29
-0.59 -0.48 -0.42 -0.51 -0.12 0.25 0.45 0.35 0.39 0.5 -0.04 -0.5
-3.43 -3.62 -3.45 -2.68 -1.04 0.74 1.18 1.18 0.97 0.69 -0.16 -1.24
-3.25 -3.22 -3.26 -2.61 -0.77 0.65 1.07 1.04 0.95 0.78 0.03 -0.89
-1.18 -1.78 -2.35 -2.3 -1.77 0.19 0.83 1.29 1.0 1.02 -0.33 -1.33
-0.36 -0.44 -0.53 -1.12 -0.64 0.11 0.52 0.77 0.53 0.14 0.21 -0.37
-1.05 -1.54 -1.54 -1.78 -0.63 0.38 0.78 0.77 0.78 0.7 0.1 -0.41
-0.53 -0.41 -0.48 -0.94 -0.28 0.47 0.58 0.69 0.61 0.32 -0.48 -0.96
-1.0 -1.42 -1.52 -1.22 -0.34 0.45 0.6 0.76 0.71 0.52 0.09 -0.24
-0.53 -0.89 -1.1 -0.89 -0.43 0.18 0.66 0.7 0.33 0.44 0.12 -0.03
-0.45 -0.39 -0.82 -0.87 -0.13 0.3 0.63 0.53 0.35 0.25 -0.12 -0.19
-0.11 -0.56 -0.64 -0.94 -0.25 0.26 0.37 0.46 0.43 0.38 -0.04 -0.14
-0.14 -1.28 -1.43 -0.54 -0.41 0.12 0.52 0.76 0.48 0.17 0.25 -0.07
-0.1 -0.19 -0.96 -1.33 -0.76 -0.13 0.38 0.49 0.52 0.4 0.34 0.07
0.26 -0.4 -1.55 -2.62 -1.15 -0.14 0.35 0.77 0.57 0.61 0.34 -0.11
-0.32 -1.05 -1.3 -1.21 -0.59 0.21 0.59 0.81 0.56 0.4 0.27 -0.35
-0.59 -0.63 -1.44 -1.71 -1.03 0.1 0.45 0.66 0.71 0.69 0.42 -0.11
-0.39 -1.01 -2.39 -3.23 -1.38 0.23 0.25 0.94 0.86 0.88 0.2 -0.05
-0.37 -0.81 -1.96 -3.66 -1.26 0.14 0.52 1.01 0.67 0.63 0.5 -0.32
0.22 -0.81 -1.91 -2.59 -1.09 0.08 0.57 0.77 0.65 0.66 0.16 -0.23
-0.5 -0.55 -0.47 -0.89 -0.29 0.25 0.31 0.76 0.41 0.2 0.16 -0.32
-0.02 -1.2 -1.78 -2.57 -1.46 -0.04 0.47 0.83 0.87 0.58 0.24 0.15
-0.31 -0.77 -0.88 -1.45 -0.56 0.1 0.41 0.65 0.52 0.33 0.33 0.12
-0.66 -1.67 -1.58 -2.26 -1.21 0.07 0.75 1.14 0.73 0.53 0.33 -0.34
-0.35 -0.78 -1.37 -1.25 -0.48 0.45 0.47 0.56 0.68 0.56 -0.02 -0.3
-1.73 -1.31 -1.13 -1.12 -0.22 0.29 0.24 0.8 0.48 0.74 0.45 -0.07
-0.2 -0.64 -1.54 -2.6 -1.09 -0.11 0.42 0.66 0.75 0.78 0.34 0.01
-1.24 -1.12 -1.18 -1.12 -0.15 0.34 0.4 0.75 0.62 0.64 0.21 -0.32
-0.37 -0.72 -1.03 -1.27 -0.48 -0.16 0.34 0.92 0.49 0.33 0.39 -0.05
-0.09 -0.89 -1.31 -2.46 -1.07 0.15 0.51 0.91 0.65 0.45 0.38 -0.3

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.