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Heatmap: Cluster_36 (HCCA clusters)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
1 h after light
3 h after light
5 h after light
7 h after light
9 h after light
11 h after light
13 h after light
15 h after light
1 h after dark
3 h after dark
5 h after dark
7 h after dark
- - 2.61 - - - - - - - 2.56 -
-3.6 0.02 0.5 0.62 -0.01 0.08 -0.05 -1.6 -0.51 0.11 0.73 0.22
- - 3.58 - - - - - - - - -
-0.29 -0.24 0.18 0.12 0.12 0.34 0.38 -0.13 -0.03 -0.17 -0.21 -0.29
-0.12 0.06 0.14 0.01 -0.03 0.25 0.2 0.11 -0.05 -0.25 -0.14 -0.29
-0.5 0.17 0.36 0.41 -0.0 -0.07 -0.15 0.22 -0.2 -0.24 -0.06 -0.23
0.35 -0.23 1.63 -0.29 -0.29 1.03 - - -0.48 -0.48 - 0.73
1.86 0.83 1.37 - - 0.84 - - - - 1.15 -
-0.93 -0.27 -0.01 0.45 -0.05 -0.92 -1.08 0.85 0.21 0.26 0.15 0.09
-0.72 0.06 -0.09 -0.13 0.06 0.01 -0.03 0.19 -0.09 0.29 0.15 0.07
0.0 -0.04 0.23 0.3 0.02 -0.04 -0.1 -0.1 -0.05 -0.21 -0.07 -0.02
- - 1.27 1.27 1.34 - - - - - 2.22 -
- - 0.94 - 0.84 1.19 1.15 - - - 0.95 0.9
-0.36 0.07 -0.15 -0.16 0.36 -0.0 0.02 -0.29 0.01 0.29 0.0 0.04
-1.82 0.13 -0.67 -0.15 0.47 0.21 -0.76 -0.34 0.11 0.71 0.09 0.47
-0.66 0.11 0.29 -0.05 0.01 -0.01 -0.05 -0.16 0.11 0.12 0.11 0.0
-0.4 -0.08 0.19 0.38 0.31 0.02 -0.2 0.07 -0.34 -0.19 0.09 -0.08
-0.68 -0.08 0.26 0.32 0.37 0.12 -0.1 0.18 -0.13 -0.1 -0.14 -0.35
- - 3.58 - - - - - - - - -
-0.72 0.26 0.37 0.42 0.09 -0.14 -0.24 -0.08 -0.03 0.03 -0.05 -0.26
-0.57 -0.04 0.22 0.09 0.28 0.25 0.19 -0.02 0.02 -0.1 -0.22 -0.35
1.71 - 2.18 - 0.14 - - 0.08 - - 1.03 -
-1.27 0.05 0.4 0.89 0.23 0.05 -0.25 -0.05 -0.15 -0.4 0.1 -0.66
- - 2.58 - - - 2.59 - - - - -
-1.11 -0.1 0.1 0.13 0.65 0.47 0.27 -0.01 0.16 -0.07 -0.7 -0.72
-1.97 -0.0 0.45 0.23 -0.22 -0.24 -0.15 -0.4 0.22 0.25 0.1 0.49
-0.65 0.18 0.21 0.07 -0.04 -0.09 -0.17 0.13 0.08 0.11 0.06 -0.08
- - 3.11 - - - - 1.74 - - - -
-0.69 -0.11 0.47 0.22 0.11 -0.02 0.02 0.11 0.02 0.08 -0.21 -0.29
-1.0 0.17 0.18 -0.02 -0.03 -0.23 -0.06 -0.18 0.09 0.41 0.06 0.19
-0.12 -0.01 0.36 0.31 0.14 0.27 0.17 0.06 -0.18 -0.43 -0.33 -0.59
- - 0.62 - 0.52 - - - 0.67 2.1 0.55 0.73
0.12 - - 1.6 - -0.75 - 2.16 0.52 - 0.48 -
-0.93 0.14 0.33 0.04 0.3 -0.16 -0.4 0.05 -0.06 0.2 0.0 0.1
-0.72 -0.01 0.32 -0.13 -0.0 -0.21 -0.07 0.13 0.22 0.18 -0.0 0.06
-0.61 -0.09 0.07 0.04 0.11 0.08 -0.07 -0.1 0.06 0.1 0.11 0.17
-0.52 -0.09 -0.05 0.09 0.2 0.22 -0.46 -0.52 -0.14 0.53 -0.02 0.32
- -0.83 0.92 1.21 1.14 1.23 0.48 -1.31 -1.64 - - -0.8
- - 2.63 - 2.53 - - - - - - -
1.82 - 2.57 - - - - - - - - 1.35
-1.83 -1.5 2.86 -0.5 -2.8 -1.62 1.32 -4.46 - -4.57 -2.66 -2.21
- - 3.58 - - - - - - - - -
- 1.69 1.55 1.63 - - 1.46 - - - - -
-1.23 -2.25 0.66 -1.99 0.87 -1.93 -0.84 0.92 0.04 1.4 -0.41 -0.85
-2.09 0.1 0.23 -0.1 0.16 -0.02 -0.26 0.1 0.31 0.33 0.1 0.02
-0.78 -0.23 0.41 0.64 0.08 0.46 -0.27 -0.45 0.07 -0.66 0.37 -0.51
-0.34 -0.25 0.29 0.34 0.22 0.19 0.35 0.15 -0.15 -0.39 -0.24 -0.52
-0.14 -0.03 0.14 0.33 0.03 -0.19 -0.2 0.17 0.08 -0.12 -0.03 -0.15
- -1.7 -0.67 0.08 0.61 0.75 0.29 0.15 -1.93 0.3 0.01 0.97
- 0.8 2.13 - - - - 2.15 - - - 0.51
- - 3.58 - - - - - - - - -
- 1.79 3.09 - - - - - - - - -
-0.16 0.02 -0.58 -0.18 -0.28 0.19 0.32 -0.04 0.14 0.13 0.13 0.1
-1.98 -0.46 -0.02 -0.23 0.13 0.14 -0.05 0.23 0.43 0.38 0.29 -0.03
- - 3.58 - - - - - - - - -
-1.54 -0.01 0.38 0.66 0.26 -0.01 -0.18 0.28 -0.16 -0.09 -0.17 -0.37
-1.85 -0.23 0.4 -0.35 -0.62 0.04 -0.14 -0.39 0.45 0.53 0.38 0.38
-0.13 0.01 0.01 0.69 0.18 -0.14 -0.02 -0.19 -0.16 -0.09 -0.27 -0.17
0.62 0.55 0.45 0.67 0.04 0.33 -1.77 -0.46 -0.74 -1.01 -0.44 -0.16
-0.01 0.02 0.11 0.28 0.21 -0.0 -0.16 0.02 -0.19 -0.15 -0.08 -0.13
-0.81 -0.09 0.15 0.21 0.39 0.12 -0.15 0.18 -0.22 -0.05 0.13 -0.19
-0.5 -0.05 0.04 0.06 0.21 0.22 0.04 0.18 -0.08 -0.13 -0.0 -0.11
-0.64 -0.26 -0.36 0.17 0.18 0.26 0.27 -0.03 0.2 0.11 -0.13 -0.03
-0.23 0.27 0.76 -0.86 0.86 0.93 0.88 - -1.99 - - 0.91
-0.96 -0.78 0.75 -1.24 1.01 0.18 0.38 0.14 -3.52 -0.86 0.32 0.44
-0.57 1.78 2.2 -2.83 -1.93 -1.15 -0.82 -1.11 -1.18 -1.33 - -0.78
-0.28 0.12 -0.14 -0.06 0.16 0.1 -0.03 -0.22 0.16 0.14 -0.28 0.2
- - 2.61 2.56 - - - - - - - -
- - 2.54 2.62 - - - - - - - -
- - 3.58 - - - - - - - - -
-1.01 -0.46 -0.33 0.25 0.18 0.59 0.34 0.0 0.2 -0.17 -0.54 0.21
- - 3.12 - 1.73 - - - - - - -
- - - - 0.87 - 2.09 1.0 - 0.96 0.98 -
0.58 -1.04 0.34 0.53 -0.37 -0.45 - 1.18 -1.99 0.9 -0.5 -0.49
- - 2.59 - - - - - - 2.58 - -
- - 2.59 - - - - - - 2.58 - -
1.8 1.21 1.31 - - 0.78 - - - - 1.01 -
1.91 -0.95 0.76 0.81 -0.99 -0.75 - - -0.88 -1.97 -0.96 0.89
- 2.09 2.95 - - - - - - - - -
1.36 1.04 -0.09 0.06 -1.0 -0.03 -0.99 -0.44 -0.77 -0.91 0.64 -
- - - 0.52 1.04 -0.19 0.77 0.58 -0.31 -0.45 -0.43 1.11
- - 2.0 - - - - - - 1.88 - 2.11
-1.71 0.07 0.18 0.06 0.2 0.04 -0.09 -0.04 0.05 0.14 0.15 0.18
- - - 2.61 2.56 - - - - - - -
- - 1.79 - - - - - 0.83 0.67 1.73 0.9
-1.6 0.55 0.26 -0.11 -0.46 -0.09 0.06 -0.22 0.37 0.28 0.14 -0.18
1.96 - 1.63 - - 0.01 - - 1.52 0.19 - -
- - 2.76 1.4 - - - - - - 1.37 -
-0.75 0.32 0.49 0.47 0.19 -0.32 -0.25 -0.02 -0.09 -0.15 -0.25 -0.15
- - 3.58 - - - - - - - - -
- - 3.58 - - - - - - - - -
0.35 -0.23 0.22 0.01 - 0.79 -1.0 -1.93 -0.24 -1.0 0.99 0.9
-0.97 0.34 -0.33 0.17 -0.09 -0.05 0.07 -0.49 -0.07 0.54 -0.2 0.44
- - 2.04 - 1.94 - - - - - - 2.01
0.16 0.07 0.12 0.58 0.17 -0.14 -0.59 -0.13 -0.48 -0.37 0.28 -0.07
- - 3.58 - - - - - - - - -
- - 3.58 - - - - - - - - -
0.04 -0.41 -0.2 1.03 0.27 -2.46 -1.16 1.14 -0.24 -0.23 0.12 -1.06
- - 2.31 1.83 - - 0.75 0.87 - - - -
-1.74 -1.77 0.68 0.86 -0.93 0.41 0.31 -0.32 -0.08 -0.14 -0.11 0.4
-0.15 -0.16 -0.69 -0.22 -0.23 0.17 0.3 0.06 0.05 0.33 0.13 0.12
1.36 1.12 -1.12 0.9 0.18 -2.22 0.3 -1.9 - -2.01 0.35 -0.81
- - 3.58 - - - - - - - - -
- - 3.58 - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.