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Heatmap: Cluster_16 (HCCA clusters)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
1 h after light
3 h after light
5 h after light
7 h after light
9 h after light
11 h after light
13 h after light
15 h after light
1 h after dark
3 h after dark
5 h after dark
7 h after dark
- - - - - - 3.58 - - - - -
- - - - 0.33 - 3.42 - - - - -
- - - - - 2.49 - - 2.67 - - -
-0.67 0.23 0.59 -0.28 -0.2 0.18 0.47 0.15 -0.33 -0.78 0.14 -0.17
- - - - - - 3.58 - - - - -
- -0.02 - 0.24 1.95 - 2.27 - - - 0.23 -
- - - - - - 3.58 - - - - -
1.22 0.64 - - - 0.52 2.41 - - - - 0.47
- -1.51 1.71 - -0.13 0.49 -1.31 0.04 1.0 -1.22 0.32 -0.1
- - - - - - 3.58 - - - - -
- - - - - - 3.58 - - - - -
- - - - - - 3.58 - - - - -
- 0.05 - 0.31 - - 1.84 - 2.62 - - -
- - 1.78 - - - 2.1 - 2.09 - - -
- -1.81 0.31 - 0.27 - 2.4 - - -1.52 0.5 1.17
- 1.26 - -0.23 0.87 0.52 0.78 0.27 -0.29 - 0.8 -
- - - - - - 3.58 - - - - -
- - - - - - 3.58 - - - - -
- - - - - - 2.8 - 1.44 1.2 - -
- -1.33 0.63 -1.39 0.48 1.45 1.11 - 1.42 -1.48 - -1.5
- -0.58 - -0.2 - -0.26 1.21 - 1.35 1.23 1.27 -
-2.06 -1.14 0.97 -0.28 0.02 -0.18 0.7 -1.51 0.82 -0.72 0.68 -0.59
- 2.7 - - - - 2.46 - - - - -
-3.37 -0.46 0.59 0.49 -0.5 -0.18 0.63 0.23 0.79 -0.1 -0.52 -0.75
-1.68 -2.15 0.21 - 0.77 0.43 2.6 - -0.69 -2.41 -1.47 -
-1.06 -0.09 0.63 -0.23 -1.59 -0.78 1.51 -0.44 -0.25 -0.26 0.49 -0.74
- 2.48 - - - - 2.68 - - - - -
-1.41 -0.41 -0.97 -1.12 -2.05 -0.27 2.37 1.17 -0.07 - -2.18 -2.04
- - - - - - 3.58 - - - - -
0.71 -0.24 - 0.65 0.12 - 0.17 - 0.59 -0.04 -1.01 1.46
-0.29 0.71 -0.42 -1.01 0.46 -1.31 1.48 0.63 - -1.09 0.3 -1.04
- - - - -0.95 0.01 2.93 - 1.22 - -0.9 -
- - - - 2.08 - 2.96 - - - - -
- -0.54 -0.56 -0.83 0.8 -0.78 2.11 -0.77 0.77 - - 0.18
- - 2.42 - - - - - 2.73 - - -
- - - - - - 3.58 - - - - -
- - - -0.61 -0.61 - 2.88 -0.24 - - 0.85 -0.6
-2.37 -0.68 -1.07 -1.87 -0.67 -0.52 2.56 -1.81 -0.87 -0.89 0.33 -0.81
- - 0.83 0.25 1.85 0.95 0.15 - - - 0.18 0.34
0.9 -0.13 1.34 - 0.37 - 1.08 0.2 0.06 - 0.13 -
- - - - 1.32 - 2.63 0.13 - - 1.17 -
0.66 - - - - 0.1 - - 1.61 0.98 0.01 1.73
-1.71 -0.3 -0.44 -0.68 -0.19 -0.25 0.19 -0.01 0.77 -0.37 0.71 0.62
- - - - - - 2.59 - - 2.58 - -
- - - - - 2.49 - - 2.67 - - -
-1.19 0.52 0.09 0.66 -0.91 0.74 1.05 -0.65 0.05 -2.02 0.04 -1.94
- - - - - - 3.58 - - - - -
- - - - - - 3.0 - 1.99 - - -
- - 1.08 - - - 3.31 - - - - -
- 0.76 - 1.15 1.15 - 2.55 - - - - -
- - - - - - 3.58 - - - - -
- - 1.34 - - - 1.66 - 1.65 1.67 - -
- - - - - - - - 2.57 2.6 - -
- -1.56 1.47 -0.22 0.77 0.21 0.73 -1.79 0.4 0.7 -1.88 -
- - - - - 1.87 - - 2.05 2.08 - -
- - - - - - 3.58 - - - - -
- - - - - - 3.58 - - - - -
-0.16 - 1.51 - -0.66 - - -0.71 0.74 1.17 -0.78 1.34
- 1.43 - - - - - - 1.62 2.64 - -
- - - - - -0.08 2.45 -0.07 -0.2 - 0.89 0.94
- -2.56 -3.23 -0.79 -1.11 0.16 1.82 -0.1 1.43 -0.27 -0.52 -0.21
- -0.98 -1.65 - -0.18 - 3.11 -1.21 - -1.32 -0.25 -
- - 1.08 -0.09 - 0.91 1.81 - 0.8 - 0.86 -
- - - - - - 3.58 - - - - -
- - - - - - 3.58 - - - - -
- - - - - - 2.78 - 1.33 - - 1.4
- - - - - - 3.58 - - - - -
-1.95 - -2.67 -0.07 -0.04 -0.28 1.66 -1.07 0.84 -0.14 0.26 0.38
-0.2 -0.33 -0.36 -0.35 -0.18 0.14 0.68 -0.06 0.53 -0.52 -0.05 0.17
- 1.05 - - - - 2.71 - - - 0.76 0.77
- 0.77 -0.55 -0.09 -0.08 -0.27 1.7 0.62 -0.7 -0.73 -0.15 -
- - - - - - 3.58 - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.