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Heatmap: Cluster_3 (HCAA Clusters)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
0 h after light
2 h after light
4 h after light
8 h after light
12 h after light
2 h after dark
4 h after dark
8 h after dark
12 h after dark
-2.66 -0.28 -0.34 1.09 1.07 -0.22 -0.18 -0.5 -0.87
-0.3 -0.12 0.14 0.6 0.58 -0.05 -0.55 -0.37 -0.43
-0.17 - - 1.94 1.35 - -1.33 -1.1 -0.23
- - - 2.33 1.99 -14.44 - - -
-4.41 -2.54 -3.92 0.83 2.4 0.43 -4.54 -3.06 -2.85
- - - 2.19 2.15 - - - -
- 1.96 -12.05 0.02 1.99 -2.94 - - -13.78
-0.43 -0.3 0.13 0.6 0.55 0.03 -0.18 -0.39 -0.51
0.42 -0.79 -1.24 1.2 0.94 -0.14 -1.54 -1.07 -0.49
-0.81 -3.27 0.39 1.54 1.53 -1.24 -2.25 -3.32 -1.02
- - - 2.16 2.18 - - - -
-0.72 - - 1.8 1.65 - - - 0.83
-0.01 0.04 -0.25 0.01 0.23 0.11 -0.06 0.11 -0.24
- - - 1.38 2.39 - 0.24 - -
- 1.7 - - 1.71 1.31 - - -
-2.98 0.34 -2.08 1.49 1.38 -0.69 -0.77 -1.36 -1.44
-0.32 1.27 -0.29 - 0.69 -0.27 -0.32 -0.2 -0.22
-0.38 -0.32 0.04 0.62 0.57 -0.14 -0.28 -0.36 -0.21
-2.3 -0.65 -2.38 1.96 0.7 -2.36 0.36 -2.29 -0.35
0.22 -0.15 -0.29 0.44 0.35 -0.12 -0.16 -0.52 -0.04
- - - 2.09 2.24 - - - -
-0.51 -0.29 0.22 1.12 1.08 -0.27 -1.43 -1.23 -1.31
- - - 2.53 1.68 - - - -
-1.0 - -0.5 0.99 1.18 0.63 -0.07 -0.91 -0.99
- - - 2.19 2.15 - - - -
-1.04 -1.84 -1.35 1.2 0.96 0.18 0.57 -0.98 -1.06
-1.03 0.99 -0.14 -0.45 0.91 -0.2 0.03 -1.45 -0.42
-2.33 -0.96 -0.09 1.43 1.44 -0.17 -1.86 -1.27 -1.54
- - - 2.14 2.2 - - - -
- -21.82 - 1.34 1.87 1.49 - - -
-0.44 -0.3 -0.6 1.13 0.19 0.0 -0.2 -0.2 -0.47
-0.46 -0.64 0.48 0.76 1.01 -0.14 -0.38 -0.95 -1.6
-1.1 -0.11 0.21 0.96 1.04 -0.8 -0.92 -0.68 -0.47
-0.13 -0.9 -2.08 1.14 1.03 0.25 -0.56 -0.52 -0.97
- 2.58 - - 1.59 - - - -
- 0.29 -0.77 1.83 1.26 0.31 - - -
-0.36 0.35 0.08 0.4 0.73 -0.04 -0.89 -1.18 -0.07
- - - 2.09 2.24 - - - -
-0.29 0.08 0.39 1.11 0.55 -0.08 -0.86 -2.3 -1.03
- 1.46 -0.56 -0.53 1.01 -0.42 -0.64 -0.41 -0.49
-1.1 -1.01 -0.34 1.81 1.45 -3.73 -0.11 - -
- 2.17 - - 2.17 - - - -
- - - 1.55 1.52 1.68 - - -
-0.17 -1.28 -0.89 0.96 0.71 0.51 -0.65 -0.08 -0.83
- - - 1.61 2.57 - - - -
- 2.29 0.46 - 0.47 - 0.43 - -
- 2.17 - - 2.17 - - - -
- - - 1.87 1.84 - 0.83 - -
-0.51 -0.34 -0.67 0.83 0.31 0.05 -0.02 -0.16 -0.09
-0.1 - - 1.43 1.39 -0.16 - -0.03 -0.17
- - - 1.2 2.16 - 1.15 - -
-1.67 -0.93 -0.43 0.85 0.99 0.36 -0.35 -0.38 -0.35
-0.35 -0.16 0.08 0.64 0.59 -0.01 -0.64 -0.4 -0.31
- 2.15 - - 2.19 - - - -
- - - 2.19 2.15 - - - -
-1.22 -2.21 -1.01 2.06 1.61 -1.87 -2.04 - -2.91
-0.18 1.76 - 1.23 1.26 - - - -
- - - 2.6 1.56 - - - -
- 2.17 - - 2.17 - - - -
0.32 -0.1 -1.43 1.39 1.02 -0.3 -1.89 -2.13 -1.0
-1.71 -1.55 -1.32 1.4 1.72 0.17 -1.26 -1.7 -2.64
-0.03 -0.97 - 2.23 0.87 0.02 - - -
- - - 2.09 2.24 - - - -
-0.55 -0.31 -2.0 1.24 1.24 0.47 -0.41 - -1.34
- 1.16 - 1.2 2.16 - - - -
- - - 2.19 2.15 - - - -
-0.91 -0.81 -0.2 0.73 1.17 0.28 0.04 -0.94 -1.51
-0.34 -0.23 -0.36 0.69 0.59 0.65 -0.22 -1.02 -0.88
- - - 0.93 1.6 1.05 - 1.0 -
0.01 -2.46 -0.66 1.5 0.99 -1.59 -0.69 -0.49 -0.55
- - - 2.09 2.24 - - - -
- - 0.55 1.63 1.59 - 0.52 - -
-0.82 -0.76 - 1.7 1.22 0.78 -0.93 - -
0.19 - - 2.45 1.27 - - - -
0.18 - - 1.79 2.14 - -10.48 - -
- - - 1.83 1.5 0.82 -0.22 - -
-3.01 2.17 0.54 -0.2 0.52 - - -1.97 -1.49
-0.48 0.32 -0.35 0.83 0.78 -0.12 -0.88 -1.0 -0.34
-1.6 -0.95 -1.02 1.8 0.78 -0.12 -0.29 -0.45 -
-1.2 -1.04 0.59 1.13 0.48 0.19 -2.26 -0.46 -0.14
0.01 -0.71 -0.79 1.66 0.27 -0.74 -0.24 -2.27 -0.33
- 0.54 - 1.58 1.55 0.7 - - -
- 0.54 - 1.58 1.55 0.7 - - -
- 1.86 - - 2.42 - - - -
- - - 2.03 2.3 - - - -
- - -0.05 1.63 1.86 - -0.99 - -0.3
-4.72 -0.56 -1.82 1.88 1.96 -3.19 -1.68 - -
0.2 -0.29 -0.73 0.96 0.57 0.21 -0.66 -0.8 -0.63
- 2.17 - - 2.17 - - - -
- - - 2.19 2.15 - - - -
-1.6 0.02 -0.17 0.81 0.68 -0.11 -0.03 -0.48 -0.35
- - - 2.09 2.24 - - - -
-2.14 0.01 -0.2 1.24 0.76 -0.24 -0.42 -0.48 -0.94
- 2.17 - - 2.17 - - - -
-0.03 -0.07 -0.17 0.04 0.22 0.08 -0.01 -0.09 -0.0
- - - 2.19 2.15 - - - -
-0.16 0.14 0.04 0.37 0.27 0.02 -0.34 -0.37 -0.16
-1.68 -1.39 -1.18 1.65 0.8 0.31 0.51 -2.61 -2.72
-2.38 -2.18 -1.35 1.44 1.76 0.23 -1.54 -1.9 -1.65
-0.56 -0.94 -2.62 1.49 0.84 -0.23 0.15 0.1 -
- - - 2.6 1.56 - - - -
-0.55 0.04 -0.11 0.88 0.56 -1.19 0.03 -0.12 -0.59
- - - 2.09 2.24 - - - -
-2.23 -1.15 -2.27 1.44 1.52 -0.04 -0.41 -1.12 -1.47
-1.11 -3.56 - 2.1 1.63 - - - 0.11
-1.47 -2.17 -0.11 1.18 1.06 0.34 -0.52 -0.21 -1.72
- - - 1.55 1.52 1.68 - - -
- - - 2.09 2.24 - - - -
-2.48 -1.46 -0.89 1.16 1.31 -0.04 0.33 -0.65 -1.52
- - - 2.09 2.24 - - - -
-1.65 -0.47 -1.07 0.92 1.31 0.67 -0.33 -1.8 -1.17
-1.61 0.41 -1.69 1.32 1.55 -1.55 -0.75 -0.57 -
- - 0.34 0.53 1.49 0.74 -0.47 0.11 -
-1.91 - - 1.54 1.7 0.67 -0.47 -2.85 -2.98
0.17 0.24 -0.9 0.87 0.83 -0.34 -0.53 -1.0 -0.82
-0.31 -0.36 -0.08 0.4 0.35 0.02 -0.05 -0.02 -0.13
-1.1 -2.96 -0.54 1.5 1.06 0.39 0.31 -3.01 -3.04
- - -1.0 1.95 1.67 -1.1 -0.01 - -
-0.08 -1.04 -0.46 0.7 0.46 0.21 -0.55 -0.09 0.07
-0.56 -1.5 - 1.69 1.93 - -0.11 - -
-4.17 1.57 -1.59 -1.8 1.95 -0.42 -2.2 -1.72 -2.1
-0.78 - 0.34 1.91 0.78 -0.64 - -0.83 -1.1
-3.0 -1.45 -0.35 1.92 1.6 -0.84 -1.69 -5.55 -5.63
-1.77 - -0.57 1.6 1.18 0.32 -0.84 -1.65 -0.74
- - - 2.32 0.69 -0.27 0.66 - -
- - - 2.09 2.24 - - - -
-0.81 -1.75 0.04 1.57 1.04 -0.44 -0.09 -1.3 -
- 2.16 - - 2.18 - - - -
- - - 2.19 2.15 - - - -
- - - 2.09 2.24 - - - -
-1.11 0.13 -0.21 1.11 1.04 -1.04 -0.18 -0.65 -1.45
- -3.13 -3.32 1.88 1.66 -0.16 -0.3 -2.91 -3.25
- -1.21 -1.19 2.0 1.5 - -0.27 -1.05 -
- - - 2.06 1.82 0.36 -11.28 - -
-0.42 0.18 -0.22 0.67 0.88 -0.2 -1.0 -0.84 -0.16
-0.49 0.19 -0.14 0.74 0.63 -0.23 -0.85 -0.53 -0.11
- - - 1.55 1.52 1.68 - - -
- - - 2.09 2.24 - - - -
- -0.18 0.79 1.45 1.41 -0.02 - - -
-1.41 -0.87 -1.45 1.26 0.9 0.87 -0.26 -1.3 -1.36
-1.15 -1.86 -1.5 1.82 0.86 0.13 0.15 -1.92 -3.03
- - - 1.55 1.52 1.68 - - -
- - - 2.09 2.24 - - - -
- - - 2.09 2.24 - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.