"sequence_id","alias","species","description","type" "231325","No alias","Selaginella moellendorffii ","Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1","protein_coding" "77814","No alias","Selaginella moellendorffii ","ubiquitin C-terminal hydrolase 3","protein_coding" "A4A49_01622","No alias","Nicotiana attenuata","ubiquitin carboxyl-terminal hydrolase 2","protein_coding" "A4A49_27831","No alias","Nicotiana attenuata","ubiquitin carboxyl-terminal hydrolase 3","protein_coding" "A4A49_32693","No alias","Nicotiana attenuata","ubiquitin carboxyl-terminal hydrolase 3","protein_coding" "AC202707.3_FG002","No alias","Zea mays","Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1","protein_coding" "At1g65650","No alias","Arabidopsis thaliana","Ubiquitin carboxyl-terminal hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178WM46]","protein_coding" "At4g17510","No alias","Arabidopsis thaliana","Ubiquitin carboxyl-terminal hydrolase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8GWE1]","protein_coding" "At5g16310","No alias","Arabidopsis thaliana","Ubiquitin carboxyl-terminal hydrolase [Source:UniProtKB/Swiss-Prot;Acc:Q9FFF2]","protein_coding" "Bradi3g06000","No alias","Brachypodium distachyon","Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1","protein_coding" "Bradi3g50470","No alias","Brachypodium distachyon","ubiquitin C-terminal hydrolase 3","protein_coding" "Bradi3g55860","No alias","Brachypodium distachyon","Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1","protein_coding" "Bradi5g17455","No alias","Brachypodium distachyon","ubiquitin C-terminal hydrolase 3","protein_coding" "Bradi5g25427","No alias","Brachypodium distachyon","ubiquitin C-terminal hydrolase 3","protein_coding" "Brara.A00882.1","No alias","Brassica rapa","ubiquitin carboxyl-terminal hydrolase *(UCH3) & ubiquitin carboxyl-terminal hydrolase *(UCH3) & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding" "Brara.C00717.1","No alias","Brassica rapa","ubiquitin carboxyl-terminal hydrolase *(UCH1/2) & ubiquitin carboxyl-terminal hydrolase *(UCH1/2) & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding" "Brara.C04555.1","No alias","Brassica rapa","ubiquitin carboxyl-terminal hydrolase *(UCH3) & ubiquitin carboxyl-terminal hydrolase *(UCH3) & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding" "Brara.G02606.1","No alias","Brassica rapa","ubiquitin carboxyl-terminal hydrolase *(UCH1/2) & ubiquitin carboxyl-terminal hydrolase *(UCH1/2) & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding" "Cre03.g194250","No alias","Chlamydomonas reinhardtii","ubiquitin C-terminal hydrolase 3","protein_coding" "Cre06.g253300","No alias","Chlamydomonas reinhardtii","Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1","protein_coding" "evm.model.contig_2293.22","No alias","Porphyridium purpureum","(at4g17510 : 184.0) ubiquitin C-terminal hydrolase 3 (UCH3); FUNCTIONS IN: ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 (InterPro:IPR001578); BEST Arabidopsis thaliana protein match is: Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 (TAIR:AT1G65650.1); Has 1294 Blast hits to 1288 proteins in 232 species: Archae - 0; Bacteria - 0; Metazoa - 624; Fungi - 359; Plants - 155; Viruses - 0; Other Eukaryotes - 156 (source: NCBI BLink). & (reliability: 368.0) & (original description: no original description)","protein_coding" "evm.model.contig_3399.11","No alias","Porphyridium purpureum","(at1g65650 : 249.0) UCH2; CONTAINS InterPro DOMAIN/s: Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 (InterPro:IPR001578), Ubiquitinyl hydrolase, UCH37 type (InterPro:IPR017390); BEST Arabidopsis thaliana protein match is: Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 (TAIR:AT5G16310.1); Has 1283 Blast hits to 1275 proteins in 236 species: Archae - 0; Bacteria - 0; Metazoa - 633; Fungi - 351; Plants - 143; Viruses - 0; Other Eukaryotes - 156 (source: NCBI BLink). & (reliability: 498.0) & (original description: no original description)","protein_coding" "evm.model.tig00000711.74","No alias","Cyanophora paradoxa","(at4g17510 : 182.0) ubiquitin C-terminal hydrolase 3 (UCH3); FUNCTIONS IN: ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 (InterPro:IPR001578); BEST Arabidopsis thaliana protein match is: Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 (TAIR:AT1G65650.1); Has 1294 Blast hits to 1288 proteins in 232 species: Archae - 0; Bacteria - 0; Metazoa - 624; Fungi - 359; Plants - 155; Viruses - 0; Other Eukaryotes - 156 (source: NCBI BLink). & (reliability: 364.0) & (original description: no original description)","protein_coding" "evm.model.tig00001085.16","No alias","Cyanophora paradoxa","(at1g65650 : 295.0) UCH2; CONTAINS InterPro DOMAIN/s: Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 (InterPro:IPR001578), Ubiquitinyl hydrolase, UCH37 type (InterPro:IPR017390); BEST Arabidopsis thaliana protein match is: Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 (TAIR:AT5G16310.1); Has 1283 Blast hits to 1275 proteins in 236 species: Archae - 0; Bacteria - 0; Metazoa - 633; Fungi - 351; Plants - 143; Viruses - 0; Other Eukaryotes - 156 (source: NCBI BLink). & (reliability: 590.0) & (original description: no original description)","protein_coding" "Glyma.01G206200","No alias","Glycine max","ubiquitin C-terminal hydrolase 3","protein_coding" "Glyma.05G063800","No alias","Glycine max","ubiquitin C-terminal hydrolase 3","protein_coding" "Glyma.10G170500","No alias","Glycine max","Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1","protein_coding" "Glyma.17G145500","No alias","Glycine max","ubiquitin C-terminal hydrolase 3","protein_coding" "Glyma.20G219500","No alias","Glycine max","Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1","protein_coding" "GRMZM2G017789","No alias","Zea mays","ubiquitin C-terminal hydrolase 3","protein_coding" "GRMZM2G018959","No alias","Zea mays","Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1","protein_coding" "GRMZM2G033375","No alias","Zea mays","ubiquitin C-terminal hydrolase 3","protein_coding" "GRMZM2G094705","No alias","Zea mays","ubiquitin C-terminal hydrolase 3","protein_coding" "GRMZM2G108739","No alias","Zea mays","Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1","protein_coding" "GRMZM2G109977","No alias","Zea mays","Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1","protein_coding" "GRMZM2G145226","No alias","Zea mays","ubiquitin C-terminal hydrolase 3","protein_coding" "GRMZM2G326223","No alias","Zea mays","Peptidase family M48 family protein","protein_coding" "HORVU1Hr1G052690.1","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU2Hr1G093570.2","No alias","Hordeum vulgare","ubiquitin carboxyl-terminal hydrolase *(UCH3) & ubiquitin carboxyl-terminal hydrolase *(UCH3) & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding" "HORVU2Hr1G117970.29","No alias","Hordeum vulgare","EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding" "HORVU3Hr1G078230.1","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU5Hr1G105430.16","No alias","Hordeum vulgare","ubiquitin carboxyl-terminal hydrolase *(UCH1/2) & ubiquitin carboxyl-terminal hydrolase *(UCH1/2) & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding" "HORVU6Hr1G029150.5","No alias","Hordeum vulgare","ubiquitin carboxyl-terminal hydrolase *(UCH1/2) & ubiquitin carboxyl-terminal hydrolase *(UCH1/2) & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding" "HORVU6Hr1G062360.2","No alias","Hordeum vulgare","ubiquitin carboxyl-terminal hydrolase *(UCH3) & ubiquitin carboxyl-terminal hydrolase *(UCH3) & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding" "HORVU6Hr1G083540.6","No alias","Hordeum vulgare","ubiquitin carboxyl-terminal hydrolase *(UCH1/2) & ubiquitin carboxyl-terminal hydrolase *(UCH1/2) & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding" "HORVU6Hr1G092480.4","No alias","Hordeum vulgare","ubiquitin carboxyl-terminal hydrolase *(UCH1/2) & ubiquitin carboxyl-terminal hydrolase *(UCH1/2) & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding" "Kfl00050_0440","kfl00050_0440_v1.1","Klebsormidium nitens","(at1g65650 : 430.0) UCH2; CONTAINS InterPro DOMAIN/s: Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 (InterPro:IPR001578), Ubiquitinyl hydrolase, UCH37 type (InterPro:IPR017390); BEST Arabidopsis thaliana protein match is: Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 (TAIR:AT5G16310.1); Has 1283 Blast hits to 1275 proteins in 236 species: Archae - 0; Bacteria - 0; Metazoa - 633; Fungi - 351; Plants - 143; Viruses - 0; Other Eukaryotes - 156 (source: NCBI BLink). & (reliability: 860.0) & (original description: no original description)","protein_coding" "Kfl00319_0030","kfl00319_0030_v1.1","Klebsormidium nitens","(at4g17510 : 222.0) ubiquitin C-terminal hydrolase 3 (UCH3); FUNCTIONS IN: ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 (InterPro:IPR001578); BEST Arabidopsis thaliana protein match is: Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 (TAIR:AT1G65650.1); Has 1294 Blast hits to 1288 proteins in 232 species: Archae - 0; Bacteria - 0; Metazoa - 624; Fungi - 359; Plants - 155; Viruses - 0; Other Eukaryotes - 156 (source: NCBI BLink). & (reliability: 444.0) & (original description: no original description)","protein_coding" "LOC_Os02g08370","No alias","Oryza sativa","ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed","protein_coding" "LOC_Os02g43760","No alias","Oryza sativa","ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed","protein_coding" "LOC_Os02g57630","No alias","Oryza sativa","ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed","protein_coding" "LOC_Os04g46190","No alias","Oryza sativa","ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed","protein_coding" "LOC_Os04g57190","No alias","Oryza sativa","ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed","protein_coding" "MA_10426488g0010","No alias","Picea abies","(at1g65650 : 393.0) UCH2; CONTAINS InterPro DOMAIN/s: Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 (InterPro:IPR001578), Ubiquitinyl hydrolase, UCH37 type (InterPro:IPR017390); BEST Arabidopsis thaliana protein match is: Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 (TAIR:AT5G16310.1); Has 1283 Blast hits to 1275 proteins in 236 species: Archae - 0; Bacteria - 0; Metazoa - 633; Fungi - 351; Plants - 143; Viruses - 0; Other Eukaryotes - 156 (source: NCBI BLink). & (reliability: 786.0) & (original description: no original description)","protein_coding" "Mp2g06160.1","No alias","Marchantia polymorpha","ubiquitin carboxyl-terminal hydrolase (UCH3)","protein_coding" "Mp4g14320.1","No alias","Marchantia polymorpha","ubiquitin carboxyl-terminal hydrolase (UCH). ubiquitin carboxyl-terminal hydrolase (UCH1|2). ubiquitin C-terminal hydrolase cofactor","protein_coding" "Potri.003G081000","No alias","Populus trichocarpa","ubiquitin C-terminal hydrolase 3","protein_coding" "Potri.004G130400","No alias","Populus trichocarpa","Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1","protein_coding" "Potri.017G075200","No alias","Populus trichocarpa","Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1","protein_coding" "Pp1s140_31V6","No alias","Physcomitrella patens","ubiquitin carboxyl-terminal hydrolase isozyme l3","protein_coding" "Pp1s15_286V6","No alias","Physcomitrella patens","ubiquitin carboxyl-terminal hydrolase isozyme","protein_coding" "PSME_00019362-RA","No alias","Pseudotsuga menziesii","(at4g17510 : 203.0) ubiquitin C-terminal hydrolase 3 (UCH3); FUNCTIONS IN: ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 (InterPro:IPR001578); BEST Arabidopsis thaliana protein match is: Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 (TAIR:AT1G65650.1); Has 1294 Blast hits to 1288 proteins in 232 species: Archae - 0; Bacteria - 0; Metazoa - 624; Fungi - 359; Plants - 155; Viruses - 0; Other Eukaryotes - 156 (source: NCBI BLink). & (reliability: 406.0) & (original description: no original description)","protein_coding" "PSME_00019363-RA","No alias","Pseudotsuga menziesii","(at4g17510 : 86.3) ubiquitin C-terminal hydrolase 3 (UCH3); FUNCTIONS IN: ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 (InterPro:IPR001578); BEST Arabidopsis thaliana protein match is: Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 (TAIR:AT1G65650.1); Has 1294 Blast hits to 1288 proteins in 232 species: Archae - 0; Bacteria - 0; Metazoa - 624; Fungi - 359; Plants - 155; Viruses - 0; Other Eukaryotes - 156 (source: NCBI BLink). & (reliability: 172.6) & (original description: no original description)","protein_coding" "PSME_00047076-RA","No alias","Pseudotsuga menziesii","(at2g25910 : 159.0) 3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein; FUNCTIONS IN: 3'-5' exonuclease activity, RNA binding, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087), K Homology, type 1, subgroup (InterPro:IPR018111), K Homology, type 1 (InterPro:IPR004088), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G25920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 318.0) & (original description: no original description)","protein_coding" "PSME_00051129-RA","No alias","Pseudotsuga menziesii","(at1g65650 : 390.0) UCH2; CONTAINS InterPro DOMAIN/s: Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 (InterPro:IPR001578), Ubiquitinyl hydrolase, UCH37 type (InterPro:IPR017390); BEST Arabidopsis thaliana protein match is: Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 (TAIR:AT5G16310.1); Has 1283 Blast hits to 1275 proteins in 236 species: Archae - 0; Bacteria - 0; Metazoa - 633; Fungi - 351; Plants - 143; Viruses - 0; Other Eukaryotes - 156 (source: NCBI BLink). & (reliability: 780.0) & (original description: no original description)","protein_coding" "Seita.1G257100.1","No alias","Setaria italica ","ubiquitin carboxyl-terminal hydrolase *(UCH3) & ubiquitin carboxyl-terminal hydrolase *(UCH3) & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding" "Seita.1G371300.1","No alias","Setaria italica ","ubiquitin carboxyl-terminal hydrolase *(UCH1/2) & ubiquitin carboxyl-terminal hydrolase *(UCH1/2) & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding" "Seita.2G156400.1","No alias","Setaria italica ","ubiquitin carboxyl-terminal hydrolase *(UCH3) & ubiquitin carboxyl-terminal hydrolase *(UCH3) & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding" "Seita.3G030300.1","No alias","Setaria italica ","ubiquitin carboxyl-terminal hydrolase *(UCH3) & ubiquitin carboxyl-terminal hydrolase *(UCH3) & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding" "Seita.5G110200.1","No alias","Setaria italica ","ubiquitin carboxyl-terminal hydrolase *(UCH1/2) & ubiquitin carboxyl-terminal hydrolase *(UCH1/2) & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding" "Seita.6G252100.1","No alias","Setaria italica ","ubiquitin carboxyl-terminal hydrolase *(UCH1/2) & ubiquitin carboxyl-terminal hydrolase *(UCH1/2) & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding" "Sobic.001G448200.1","No alias","Sorghum bicolor ","ubiquitin carboxyl-terminal hydrolase *(UCH1/2) & ubiquitin carboxyl-terminal hydrolase *(UCH1/2) & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding" "Sobic.004G297300.1","No alias","Sorghum bicolor ","ubiquitin carboxyl-terminal hydrolase *(UCH3) & ubiquitin carboxyl-terminal hydrolase *(UCH3) & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding" "Sobic.004G350100.3","No alias","Sorghum bicolor ","ubiquitin carboxyl-terminal hydrolase *(UCH1/2) & ubiquitin carboxyl-terminal hydrolase *(UCH1/2) & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding" "Sobic.006G167400.1","No alias","Sorghum bicolor ","ubiquitin carboxyl-terminal hydrolase *(UCH3) & ubiquitin carboxyl-terminal hydrolase *(UCH3) & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding" "Sobic.006G257600.1","No alias","Sorghum bicolor ","ubiquitin carboxyl-terminal hydrolase *(UCH3) & ubiquitin carboxyl-terminal hydrolase *(UCH3) & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding" "Sobic.007G165900.1","No alias","Sorghum bicolor ","ubiquitin carboxyl-terminal hydrolase *(UCH1/2) & ubiquitin carboxyl-terminal hydrolase *(UCH1/2) & EC_3.4 hydrolase acting on peptide bond (peptidase)","protein_coding" "Solyc06g060850","No alias","Solanum lycopersicum","Ubiquitin carboxyl-terminal hydrolase (AHRD V3.3 *** K4C6R5_SOLLC)","protein_coding" "Solyc08g078140","No alias","Solanum lycopersicum","Ubiquitin carboxyl-terminal hydrolase (AHRD V3.3 *** K4CNH3_SOLLC)","protein_coding" "Solyc09g018730","No alias","Solanum lycopersicum","Ubiquitin carboxyl-terminal hydrolase (AHRD V3.3 *** M1BT38_SOLTU)","protein_coding" "Sopen06g021000","No alias","Solanum pennellii","Ubiquitin carboxyl-terminal hydrolase, family 1","protein_coding" "Sopen08g026630","No alias","Solanum pennellii","Ubiquitin carboxyl-terminal hydrolase, family 1","protein_coding" "Sopen08g026640","No alias","Solanum pennellii","Ubiquitin carboxyl-terminal hydrolase, family 1","protein_coding" "Sopen09g012270","No alias","Solanum pennellii","Ubiquitin carboxyl-terminal hydrolase, family 1","protein_coding"