"sequence_id","alias","species","description","type"
"10140","No alias","Selaginella moellendorffii ","DNA helicase (RECQl4A)","protein_coding"
"102612","No alias","Selaginella moellendorffii ","chromatin remodeling 5","protein_coding"
"102849","No alias","Selaginella moellendorffii ","Homeotic gene regulator","protein_coding"
"104808","No alias","Selaginella moellendorffii ","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"105080","No alias","Selaginella moellendorffii ","RECQ helicase L2","protein_coding"
"10677","No alias","Selaginella moellendorffii ","DEAD box RNA helicase (RH3)","protein_coding"
"107914","No alias","Selaginella moellendorffii ","DEA(D/H)-box RNA helicase family protein","protein_coding"
"109740","No alias","Selaginella moellendorffii ","SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related","protein_coding"
"110395","No alias","Selaginella moellendorffii ","chromatin remodeling 1","protein_coding"
"110695","No alias","Selaginella moellendorffii ","DNA/RNA helicase protein","protein_coding"
"111217","No alias","Selaginella moellendorffii ","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"11301","No alias","Selaginella moellendorffii ","DEA(D/H)-box RNA helicase family protein","protein_coding"
"114130","No alias","Selaginella moellendorffii ","ATP-dependent RNA helicase, mitochondrial (SUV3)","protein_coding"
"116103","No alias","Selaginella moellendorffii ","eukaryotic translation initiation factor 4A1","protein_coding"
"121270","No alias","Selaginella moellendorffii ","helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related","protein_coding"
"123861","No alias","Selaginella moellendorffii ","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"123971","No alias","Selaginella moellendorffii ","Helicase protein with RING/U-box domain","protein_coding"
"130534","No alias","Selaginella moellendorffii ","chromatin remodeling 4","protein_coding"
"132834","No alias","Selaginella moellendorffii ","DEAD-box protein abstrakt, putative","protein_coding"
"139206","No alias","Selaginella moellendorffii ","SNF2 domain-containing protein / helicase domain-containing protein","protein_coding"
"142751","No alias","Selaginella moellendorffii ","DEA(D/H)-box RNA helicase family protein","protein_coding"
"143427","No alias","Selaginella moellendorffii ","SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein","protein_coding"
"143895","No alias","Selaginella moellendorffii ","eukaryotic translation initiation factor 4A1","protein_coding"
"144158","No alias","Selaginella moellendorffii ","U5 small nuclear ribonucleoprotein helicase, putative","protein_coding"
"146823","No alias","Selaginella moellendorffii ","DEAD/DEAH box RNA helicase family protein","protein_coding"
"149865","No alias","Selaginella moellendorffii ","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"150370","No alias","Selaginella moellendorffii ","DEAD box RNA helicase (PRH75)","protein_coding"
"155996","No alias","Selaginella moellendorffii ","chromatin remodeling factor CHD3 (PICKLE)","protein_coding"
"158648","No alias","Selaginella moellendorffii ","RNAhelicase-like 8","protein_coding"
"160867","No alias","Selaginella moellendorffii ","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"164382","No alias","Selaginella moellendorffii ","eukaryotic initiation factor 4A-III","protein_coding"
"164481","No alias","Selaginella moellendorffii ","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"165331","No alias","Selaginella moellendorffii ","hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides;ATP-dependent helicases;nucleic acid binding;ATP binding;RNA binding;helicases","protein_coding"
"165735","No alias","Selaginella moellendorffii ","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"173103","No alias","Selaginella moellendorffii ","zinc finger (CCCH type) helicase family protein","protein_coding"
"173775","No alias","Selaginella moellendorffii ","RNA helicase family protein","protein_coding"
"174598","No alias","Selaginella moellendorffii ","RNA helicase, ATP-dependent, SK12/DOB1 protein","protein_coding"
"174634","No alias","Selaginella moellendorffii ","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"174931","No alias","Selaginella moellendorffii ","RNA helicase 1","protein_coding"
"177444","No alias","Selaginella moellendorffii ","RNA helicase family protein","protein_coding"
"177985","No alias","Selaginella moellendorffii ","chromatin remodeling factor CHD3 (PICKLE)","protein_coding"
"178562","No alias","Selaginella moellendorffii ","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"178863","No alias","Selaginella moellendorffii ","U5 small nuclear ribonucleoprotein helicase","protein_coding"
"186944","No alias","Selaginella moellendorffii ","DNA binding;ATP binding;nucleic acid binding;binding;helicases;ATP binding;DNA binding;helicases","protein_coding"
"230685","No alias","Selaginella moellendorffii ","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"230807","No alias","Selaginella moellendorffii ","DEAD-box protein abstrakt, putative","protein_coding"
"232454","No alias","Selaginella moellendorffii ","DEA(D/H)-box RNA helicase family protein","protein_coding"
"233605","No alias","Selaginella moellendorffii ","ATP-dependent RNA helicase, putative","protein_coding"
"235696","No alias","Selaginella moellendorffii ","chromatin remodeling 8","protein_coding"
"23881","No alias","Selaginella moellendorffii ","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"267628","No alias","Selaginella moellendorffii ","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"268770","No alias","Selaginella moellendorffii ","RNA helicase 36","protein_coding"
"30996","No alias","Selaginella moellendorffii ","DEAD box RNA helicase (RH3)","protein_coding"
"402571","No alias","Selaginella moellendorffii ","RECQ helicase L4B","protein_coding"
"403724","No alias","Selaginella moellendorffii ","DEA(D/H)-box RNA helicase family protein","protein_coding"
"407400","No alias","Selaginella moellendorffii ","dicer-like 2","protein_coding"
"407530","No alias","Selaginella moellendorffii ","homolog of RAD54","protein_coding"
"408","No alias","Selaginella moellendorffii ","DNA/RNA helicase protein","protein_coding"
"410231","No alias","Selaginella moellendorffii ","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"410613","No alias","Selaginella moellendorffii ","U5 small nuclear ribonucleoprotein helicase","protein_coding"
"412612","No alias","Selaginella moellendorffii ","homolog of RAD54","protein_coding"
"41328","No alias","Selaginella moellendorffii ","DEAD/DEAH box RNA helicase family protein","protein_coding"
"413731","No alias","Selaginella moellendorffii ","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"414152","No alias","Selaginella moellendorffii ","DNA/RNA helicase protein","protein_coding"
"414740","No alias","Selaginella moellendorffii ","RNA helicase family protein","protein_coding"
"418902","No alias","Selaginella moellendorffii ","nucleic acid binding;ATP-dependent helicases;ATP binding;helicases;ATP-dependent helicases","protein_coding"
"419303","No alias","Selaginella moellendorffii ","DEA(D/H)-box RNA helicase family protein","protein_coding"
"426581","No alias","Selaginella moellendorffii ","SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related","protein_coding"
"427665","No alias","Selaginella moellendorffii ","DEA(D/H)-box RNA helicase family protein","protein_coding"
"428040","No alias","Selaginella moellendorffii ","RNA helicase family protein","protein_coding"
"429199","No alias","Selaginella moellendorffii ","RNA helicase family protein","protein_coding"
"429540","No alias","Selaginella moellendorffii ","SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related","protein_coding"
"429547","No alias","Selaginella moellendorffii ","SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related","protein_coding"
"429595","No alias","Selaginella moellendorffii ","SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related","protein_coding"
"430927","No alias","Selaginella moellendorffii ","Helicase protein with RING/U-box domain","protein_coding"
"430930","No alias","Selaginella moellendorffii ","DNA/RNA helicase protein","protein_coding"
"43111","No alias","Selaginella moellendorffii ","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"431801","No alias","Selaginella moellendorffii ","SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related","protein_coding"
"437743","No alias","Selaginella moellendorffii ","DEA(D/H)-box RNA helicase family protein","protein_coding"
"438217","No alias","Selaginella moellendorffii ","hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides;ATP-dependent helicases;nucleic acid binding;ATP binding;RNA binding;helicases","protein_coding"
"438275","No alias","Selaginella moellendorffii ","zinc ion binding;DNA binding;helicases;ATP binding;nucleic acid binding","protein_coding"
"43861","No alias","Selaginella moellendorffii ","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"440203","No alias","Selaginella moellendorffii ","chromatin-remodeling protein 11","protein_coding"
"440815","No alias","Selaginella moellendorffii ","chromatin remodeling 5","protein_coding"
"440996","No alias","Selaginella moellendorffii ","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"441095","No alias","Selaginella moellendorffii ","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"441099","No alias","Selaginella moellendorffii ","DEAD box RNA helicase family protein","protein_coding"
"441121","No alias","Selaginella moellendorffii ","chromatin remodeling 42","protein_coding"
"441970","No alias","Selaginella moellendorffii ","zinc finger (CCCH type) helicase family protein","protein_coding"
"442170","No alias","Selaginella moellendorffii ","eukaryotic initiation factor 4A-III","protein_coding"
"444049","No alias","Selaginella moellendorffii ","dicer-like 1","protein_coding"
"444050","No alias","Selaginella moellendorffii ","INO80 ortholog","protein_coding"
"444354","No alias","Selaginella moellendorffii ","DEAD/DEAH box RNA helicase family protein","protein_coding"
"447130","No alias","Selaginella moellendorffii ","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"448444","No alias","Selaginella moellendorffii ","dicer-like 1","protein_coding"
"448879","No alias","Selaginella moellendorffii ","DEA(D/H)-box RNA helicase family protein","protein_coding"
"50132","No alias","Selaginella moellendorffii ","helicase in vascular tissue and tapetum","protein_coding"
"50459","No alias","Selaginella moellendorffii ","chromatin remodeling 24","protein_coding"
"50956","No alias","Selaginella moellendorffii ","switch 2","protein_coding"
"51367","No alias","Selaginella moellendorffii ","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"52088","No alias","Selaginella moellendorffii ","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"52119","No alias","Selaginella moellendorffii ","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"59367","No alias","Selaginella moellendorffii ","DEAD box RNA helicase family protein","protein_coding"
"60241","No alias","Selaginella moellendorffii ","transcription regulatory protein SNF2, putative","protein_coding"
"62176","No alias","Selaginella moellendorffii ","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"6924","No alias","Selaginella moellendorffii ","ATP-dependent RNA helicase, putative","protein_coding"
"73550","No alias","Selaginella moellendorffii ","SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related","protein_coding"
"74321","No alias","Selaginella moellendorffii ","dicer-like 1","protein_coding"
"74832","No alias","Selaginella moellendorffii ","RNA helicase family protein","protein_coding"
"75384","No alias","Selaginella moellendorffii ","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"76120","No alias","Selaginella moellendorffii ","RNA helicase family protein","protein_coding"
"76516","No alias","Selaginella moellendorffii ","chromatin remodeling factor18","protein_coding"
"77276","No alias","Selaginella moellendorffii ","DEAD/DEAH box helicase, putative","protein_coding"
"79650","No alias","Selaginella moellendorffii ","RNA helicase, ATP-dependent, SK12/DOB1 protein","protein_coding"
"80139","No alias","Selaginella moellendorffii ","SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein","protein_coding"
"81713","No alias","Selaginella moellendorffii ","ATP-dependent RNA helicase, mitochondrial, putative","protein_coding"
"82212","No alias","Selaginella moellendorffii ","RNA helicase family protein","protein_coding"
"84719","No alias","Selaginella moellendorffii ","chromatin remodeling 31","protein_coding"
"84809","No alias","Selaginella moellendorffii ","chromatin-remodeling protein 11","protein_coding"
"85554","No alias","Selaginella moellendorffii ","eukaryotic translation initiation factor 4A1","protein_coding"
"86079","No alias","Selaginella moellendorffii ","RH39","protein_coding"
"86110","No alias","Selaginella moellendorffii ","dicer-like 1","protein_coding"
"874","No alias","Selaginella moellendorffii ","DEA(D/H)-box RNA helicase family protein","protein_coding"
"90579","No alias","Selaginella moellendorffii ","DEAD/DEAH box RNA helicase family protein","protein_coding"
"9061","No alias","Selaginella moellendorffii ","helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related","protein_coding"
"97186","No alias","Selaginella moellendorffii ","ATP binding;ATP-dependent helicases;DNA helicases","protein_coding"
"97519","No alias","Selaginella moellendorffii ","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"98008","No alias","Selaginella moellendorffii ","zinc finger (CCCH type) helicase family protein","protein_coding"
"98462","No alias","Selaginella moellendorffii ","RECQ helicase l1","protein_coding"
"98495","No alias","Selaginella moellendorffii ","RNA helicase family protein","protein_coding"
"98552","No alias","Selaginella moellendorffii ","DEA(D/H)-box RNA helicase family protein","protein_coding"
"99603","No alias","Selaginella moellendorffii ","putative mitochondrial RNA helicase 2","protein_coding"
"99840","No alias","Selaginella moellendorffii ","DEA(D/H)-box RNA helicase family protein","protein_coding"
"99934","No alias","Selaginella moellendorffii ","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"A4A49_00397","No alias","Nicotiana attenuata","atp-dependent dna helicase, chloroplastic","protein_coding"
"A4A49_00699","No alias","Nicotiana attenuata","pre-mrna-splicing factor atp-dependent rna helicase deah7","protein_coding"
"A4A49_00817","No alias","Nicotiana attenuata","chd3-type chromatin-remodeling factor pickle","protein_coding"
"A4A49_00869","No alias","Nicotiana attenuata","putative pre-mrna-splicing factor atp-dependent rna helicase deah2","protein_coding"
"A4A49_01009","No alias","Nicotiana attenuata","dead-box atp-dependent rna helicase 47, mitochondrial","protein_coding"
"A4A49_01233","No alias","Nicotiana attenuata","helicase-like transcription factor chr28","protein_coding"
"A4A49_01410","No alias","Nicotiana attenuata","mediator of rna polymerase ii transcription subunit 34","protein_coding"
"A4A49_01912","No alias","Nicotiana attenuata","putative helicase chr10","protein_coding"
"A4A49_02244","No alias","Nicotiana attenuata","endoribonuclease dicer-like 1","protein_coding"
"A4A49_02348","No alias","Nicotiana attenuata","helicase-like transcription factor chr28","protein_coding"
"A4A49_02380","No alias","Nicotiana attenuata","atp-dependent dna helicase-like recg, chloroplastic","protein_coding"
"A4A49_02472","No alias","Nicotiana attenuata","dead-box atp-dependent rna helicase 40","protein_coding"
"A4A49_02539","No alias","Nicotiana attenuata","dead-box atp-dependent rna helicase 57","protein_coding"
"A4A49_03178","No alias","Nicotiana attenuata","protein chromatin remodeling 20","protein_coding"
"A4A49_03610","No alias","Nicotiana attenuata","dexh-box atp-dependent rna helicase dexh14","protein_coding"
"A4A49_03849","No alias","Nicotiana attenuata","protein chromatin remodeling 4","protein_coding"
"A4A49_04038","No alias","Nicotiana attenuata","SMARCA3-like protein 2","protein_coding"
"A4A49_04228","No alias","Nicotiana attenuata","dead-box atp-dependent rna helicase 7","protein_coding"
"A4A49_04875","No alias","Nicotiana attenuata","helicase and polymerase-containing protein tebichi","protein_coding"
"A4A49_05069","No alias","Nicotiana attenuata","dexh-box atp-dependent rna helicase dexh18, mitochondrial","protein_coding"
"A4A49_05437","No alias","Nicotiana attenuata","chd3-type chromatin-remodeling factor pickle","protein_coding"
"A4A49_05706","No alias","Nicotiana attenuata","atp-dependent rna helicase deah11, chloroplastic","protein_coding"
"A4A49_05847","No alias","Nicotiana attenuata","atp-dependent rna helicase suv3, mitochondrial","protein_coding"
"A4A49_05930","No alias","Nicotiana attenuata","pre-mrna-splicing factor atp-dependent rna helicase deah10","protein_coding"
"A4A49_05945","No alias","Nicotiana attenuata","dead-box atp-dependent rna helicase 35","protein_coding"
"A4A49_06076","No alias","Nicotiana attenuata","dead-box atp-dependent rna helicase 35","protein_coding"
"A4A49_06213","No alias","Nicotiana attenuata","dexh-box atp-dependent rna helicase dexh12","protein_coding"
"A4A49_06409","No alias","Nicotiana attenuata","atp-dependent rna helicase-like protein db10","protein_coding"
"A4A49_07149","No alias","Nicotiana attenuata","dead-box atp-dependent rna helicase 38","protein_coding"
"A4A49_08394","No alias","Nicotiana attenuata","dead-box atp-dependent rna helicase 58, chloroplastic","protein_coding"
"A4A49_08521","No alias","Nicotiana attenuata","protein chromatin remodeling 25","protein_coding"
"A4A49_08664","No alias","Nicotiana attenuata","dead-box atp-dependent rna helicase 37","protein_coding"
"A4A49_08973","No alias","Nicotiana attenuata","helicase-like transcription factor chr28","protein_coding"
"A4A49_09094","No alias","Nicotiana attenuata","pre-mrna-splicing factor atp-dependent rna helicase deah7","protein_coding"
"A4A49_09264","No alias","Nicotiana attenuata","dead-box atp-dependent rna helicase 10","protein_coding"
"A4A49_09307","No alias","Nicotiana attenuata","SMARCA3-like protein 3","protein_coding"
"A4A49_09612","No alias","Nicotiana attenuata","dead-box atp-dependent rna helicase 24","protein_coding"
"A4A49_09660","No alias","Nicotiana attenuata","atp-dependent dna helicase q-like 4b","protein_coding"
"A4A49_10022","No alias","Nicotiana attenuata","dexh-box atp-dependent rna helicase dexh3","protein_coding"
"A4A49_10838","No alias","Nicotiana attenuata","dexh-box atp-dependent rna helicase dexh3","protein_coding"
"A4A49_11215","No alias","Nicotiana attenuata","dead-box atp-dependent rna helicase 39","protein_coding"
"A4A49_11387","No alias","Nicotiana attenuata","atp-dependent dna helicase q-like 3","protein_coding"
"A4A49_11731","No alias","Nicotiana attenuata","dexh-box atp-dependent rna helicase dexh5, mitochondrial","protein_coding"
"A4A49_11740","No alias","Nicotiana attenuata","protein chromatin remodeling 24","protein_coding"
"A4A49_11921","No alias","Nicotiana attenuata","putative pre-mrna-splicing factor atp-dependent rna helicase deah4","protein_coding"
"A4A49_12325","No alias","Nicotiana attenuata","dead-box atp-dependent rna helicase 3, chloroplastic","protein_coding"
"A4A49_12498","No alias","Nicotiana attenuata","dead-box atp-dependent rna helicase 31","protein_coding"
"A4A49_13370","No alias","Nicotiana attenuata","dead-box atp-dependent rna helicase 36","protein_coding"
"A4A49_13551","No alias","Nicotiana attenuata","atp-dependent rna helicase-like protein db10","protein_coding"
"A4A49_15044","No alias","Nicotiana attenuata","dexh-box atp-dependent rna helicase dexh10","protein_coding"
"A4A49_15190","No alias","Nicotiana attenuata","dead-box atp-dependent rna helicase 21","protein_coding"
"A4A49_15714","No alias","Nicotiana attenuata","atp-dependent dna helicase ddm1","protein_coding"
"A4A49_15746","No alias","Nicotiana attenuata","eukaryotic initiation factor 4a-9","protein_coding"
"A4A49_16070","No alias","Nicotiana attenuata","atp-dependent dna helicase q-like 5","protein_coding"
"A4A49_16111","No alias","Nicotiana attenuata","eukaryotic initiation factor 4a-8","protein_coding"
"A4A49_16179","No alias","Nicotiana attenuata","protein photoperiod-independent early flowering 1","protein_coding"
"A4A49_16477","No alias","Nicotiana attenuata","dexh-box atp-dependent rna helicase dexh12","protein_coding"
"A4A49_16502","No alias","Nicotiana attenuata","eukaryotic initiation factor 4a-3","protein_coding"
"A4A49_16729","No alias","Nicotiana attenuata","atp-dependent dna helicase q-like 5","protein_coding"
"A4A49_17041","No alias","Nicotiana attenuata","dead-box atp-dependent rna helicase 28","protein_coding"
"A4A49_17239","No alias","Nicotiana attenuata","dead-box atp-dependent rna helicase 5","protein_coding"
"A4A49_17346","No alias","Nicotiana attenuata","dead-box atp-dependent rna helicase 32","protein_coding"
"A4A49_17356","No alias","Nicotiana attenuata","dead-box atp-dependent rna helicase 52a","protein_coding"
"A4A49_17386","No alias","Nicotiana attenuata","eukaryotic initiation factor 4a-15","protein_coding"
"A4A49_17515","No alias","Nicotiana attenuata","SMARCA3-like protein 3","protein_coding"
"A4A49_17680","No alias","Nicotiana attenuata","SMARCA3-like 1","protein_coding"
"A4A49_17779","No alias","Nicotiana attenuata","atp-dependent helicase brm","protein_coding"
"A4A49_17944","No alias","Nicotiana attenuata","dead-box atp-dependent rna helicase 22","protein_coding"
"A4A49_18164","No alias","Nicotiana attenuata","SMARCA3-like protein 3","protein_coding"
"A4A49_18498","No alias","Nicotiana attenuata","dead-box atp-dependent rna helicase 17","protein_coding"
"A4A49_18879","No alias","Nicotiana attenuata","dead-box atp-dependent rna helicase 53","protein_coding"
"A4A49_19466","No alias","Nicotiana attenuata","putative dead-box atp-dependent rna helicase 29","protein_coding"
"A4A49_19860","No alias","Nicotiana attenuata","endoribonuclease dicer-like 4","protein_coding"
"A4A49_20219","No alias","Nicotiana attenuata","helicase-like transcription factor chr28","protein_coding"
"A4A49_20362","No alias","Nicotiana attenuata","dead-box atp-dependent rna helicase 37","protein_coding"
"A4A49_20386","No alias","Nicotiana attenuata","dead-box atp-dependent rna helicase 13","protein_coding"
"A4A49_21423","No alias","Nicotiana attenuata","dead-box atp-dependent rna helicase 16","protein_coding"
"A4A49_21449","No alias","Nicotiana attenuata","dexh-box atp-dependent rna helicase dexh6","protein_coding"
"A4A49_22090","No alias","Nicotiana attenuata","protein chromatin remodeling 8","protein_coding"
"A4A49_22233","No alias","Nicotiana attenuata","dead-box atp-dependent rna helicase 45","protein_coding"
"A4A49_22401","No alias","Nicotiana attenuata","dead-box atp-dependent rna helicase 50","protein_coding"
"A4A49_22963","No alias","Nicotiana attenuata","dead-box atp-dependent rna helicase 10","protein_coding"
"A4A49_23144","No alias","Nicotiana attenuata","pre-mrna-splicing factor atp-dependent rna helicase deah1","protein_coding"
"A4A49_24321","No alias","Nicotiana attenuata","dead-box atp-dependent rna helicase 7","protein_coding"
"A4A49_24763","No alias","Nicotiana attenuata","dead-box atp-dependent rna helicase 21","protein_coding"
"A4A49_24860","No alias","Nicotiana attenuata","atp-dependent dna helicase q-like 4a","protein_coding"
"A4A49_25183","No alias","Nicotiana attenuata","snf2 domain-containing protein classy 3","protein_coding"
"A4A49_25658","No alias","Nicotiana attenuata","protein chromatin remodeling 35","protein_coding"
"A4A49_25923","No alias","Nicotiana attenuata","dead-box atp-dependent rna helicase 53","protein_coding"
"A4A49_25973","No alias","Nicotiana attenuata","dead-box atp-dependent rna helicase 38","protein_coding"
"A4A49_26818","No alias","Nicotiana attenuata","dexh-box atp-dependent rna helicase dexh7, chloroplastic","protein_coding"
"A4A49_27543","No alias","Nicotiana attenuata","putative atp-dependent dna helicase chr12","protein_coding"
"A4A49_28435","No alias","Nicotiana attenuata","dead-box atp-dependent rna helicase 52b","protein_coding"
"A4A49_28608","No alias","Nicotiana attenuata","atp-dependent dna helicase q-like sim","protein_coding"
"A4A49_28780","No alias","Nicotiana attenuata","switch 2","protein_coding"
"A4A49_29656","No alias","Nicotiana attenuata","endoribonuclease dicer-like 3b","protein_coding"
"A4A49_30299","No alias","Nicotiana attenuata","atp-dependent rna helicase deah12, chloroplastic","protein_coding"
"A4A49_30694","No alias","Nicotiana attenuata","protein chromatin remodeling 5","protein_coding"
"A4A49_31598","No alias","Nicotiana attenuata","dead-box atp-dependent rna helicase 51","protein_coding"
"A4A49_31684","No alias","Nicotiana attenuata","dead-box atp-dependent rna helicase 56","protein_coding"
"A4A49_31936","No alias","Nicotiana attenuata","dead-box atp-dependent rna helicase 30","protein_coding"
"A4A49_32523","No alias","Nicotiana attenuata","eukaryotic initiation factor 4a-9","protein_coding"
"A4A49_32643","No alias","Nicotiana attenuata","dead-box atp-dependent rna helicase 20","protein_coding"
"A4A49_32982","No alias","Nicotiana attenuata","dexh-box atp-dependent rna helicase dexh10","protein_coding"
"A4A49_33112","No alias","Nicotiana attenuata","dead-box atp-dependent rna helicase 41","protein_coding"
"A4A49_34289","No alias","Nicotiana attenuata","iswi chromatin-remodeling complex atpase chr11","protein_coding"
"A4A49_35509","No alias","Nicotiana attenuata","snf2 domain-containing protein classy 1","protein_coding"
"A4A49_35575","No alias","Nicotiana attenuata","dead-box atp-dependent rna helicase 18","protein_coding"
"A4A49_35784","No alias","Nicotiana attenuata","dexh-box atp-dependent rna helicase dexh12","protein_coding"
"A4A49_36366","No alias","Nicotiana attenuata","dead-box atp-dependent rna helicase 37","protein_coding"
"A4A49_36630","No alias","Nicotiana attenuata","f-box protein","protein_coding"
"A4A49_36804","No alias","Nicotiana attenuata","putative dead-box atp-dependent rna helicase 48","protein_coding"
"A4A49_36920","No alias","Nicotiana attenuata","atp-dependent dna helicase q-like 1","protein_coding"
"A4A49_37323","No alias","Nicotiana attenuata","putative chromatin-remodeling complex atpase chain","protein_coding"
"A4A49_37418","No alias","Nicotiana attenuata","atp-dependent rna helicase deah13","protein_coding"
"A4A49_37661","No alias","Nicotiana attenuata","eukaryotic initiation factor 4a-9","protein_coding"
"A4A49_37861","No alias","Nicotiana attenuata","eukaryotic initiation factor 4a-14","protein_coding"
"A4A49_38215","No alias","Nicotiana attenuata","dexh-box atp-dependent rna helicase dexh17","protein_coding"
"A4A49_38791","No alias","Nicotiana attenuata","eukaryotic initiation factor 4a-3","protein_coding"
"A4A49_39255","No alias","Nicotiana attenuata","dead-box atp-dependent rna helicase 1","protein_coding"
"A4A49_39338","No alias","Nicotiana attenuata","tata-binding protein-associated factor btaf1","protein_coding"
"A4A49_39421","No alias","Nicotiana attenuata","dexh-box atp-dependent rna helicase dexh8","protein_coding"
"A4A49_39827","No alias","Nicotiana attenuata","dna helicase ino80","protein_coding"
"A4A49_40243","No alias","Nicotiana attenuata","dexh-box atp-dependent rna helicase dexh1","protein_coding"
"A4A49_40367","No alias","Nicotiana attenuata","dexh-box atp-dependent rna helicase dexh12","protein_coding"
"A4A49_40832","No alias","Nicotiana attenuata","atp-dependent dna helicase ddm1","protein_coding"
"A4A49_41176","No alias","Nicotiana attenuata","endoribonuclease dicer-like 2","protein_coding"
"A4A49_43042","No alias","Nicotiana attenuata","dead-box atp-dependent rna helicase 27","protein_coding"
"A4A49_50225","No alias","Nicotiana attenuata","chromatin structure-remodeling complex protein syd","protein_coding"
"A4A49_56777","No alias","Nicotiana attenuata","chd3-type chromatin-remodeling factor pickle","protein_coding"
"A4A49_57939","No alias","Nicotiana attenuata","iswi chromatin-remodeling complex atpase chr11","protein_coding"
"A4A49_59316","No alias","Nicotiana attenuata","dead-box atp-dependent rna helicase 56","protein_coding"
"A4A49_59540","No alias","Nicotiana attenuata","dead-box atp-dependent rna helicase 56","protein_coding"
"A4A49_60530","No alias","Nicotiana attenuata","dead-box atp-dependent rna helicase 1","protein_coding"
"A4A49_60643","No alias","Nicotiana attenuata","pre-mrna-splicing factor atp-dependent rna helicase deah1","protein_coding"
"A4A49_61369","No alias","Nicotiana attenuata","eukaryotic initiation factor 4a-14","protein_coding"
"A4A49_62264","No alias","Nicotiana attenuata","eukaryotic initiation factor 4a-11","protein_coding"
"A4A49_64708","No alias","Nicotiana attenuata","eukaryotic initiation factor 4a-2","protein_coding"
"AC198169.4_FG004","No alias","Zea mays","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"AC198418.3_FG005","No alias","Zea mays","DEAD box RNA helicase (RH3)","protein_coding"
"AC225176.2_FG006","No alias","Zea mays","ATP-dependent RNA helicase, mitochondrial, putative","protein_coding"
"AC235535.1_FG001","No alias","Zea mays","chromatin-remodeling protein 11","protein_coding"
"At1g01040","No alias","Arabidopsis thaliana","Dicer-like 1 [Source:UniProtKB/TrEMBL;Acc:F4HQG6]","protein_coding"
"At1g02670","No alias","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:TAIR;Acc:AT1G02670]","protein_coding"
"At1g03750","No alias","Arabidopsis thaliana","Switch 2 [Source:UniProtKB/Swiss-Prot;Acc:F4I2H2]","protein_coding"
"At1g05120","No alias","Arabidopsis thaliana","Helicase protein with RING/U-box domain [Source:TAIR;Acc:AT1G05120]","protein_coding"
"At1g05490","No alias","Arabidopsis thaliana","SNF2 domain-containing protein CLASSY 3 [Source:UniProtKB/Swiss-Prot;Acc:F4I8S3]","protein_coding"
"At1g06670","No alias","Arabidopsis thaliana","DExH-box ATP-dependent RNA helicase DExH2 [Source:UniProtKB/Swiss-Prot;Acc:F4IDQ6]","protein_coding"
"At1g08600","No alias","Arabidopsis thaliana","CHR20 [Source:UniProtKB/TrEMBL;Acc:A0A178VZQ9]","protein_coding"
"At1g10930","No alias","Arabidopsis thaliana","ATP-dependent DNA helicase Q-like 4A [Source:UniProtKB/Swiss-Prot;Acc:Q8L840]","protein_coding"
"At1g11100","No alias","Arabidopsis thaliana","SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SUU4]","protein_coding"
"At1g12770","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 47, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8W4E1]","protein_coding"
"At1g16280","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 36 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA27]","protein_coding"
"At1g20920","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 42 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0U8]","protein_coding"
"At1g20960","No alias","Arabidopsis thaliana","DExH-box ATP-dependent RNA helicase DExH12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYP1]","protein_coding"
"At1g26370","No alias","Arabidopsis thaliana","Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 [Source:UniProtKB/Swiss-Prot;Acc:F4IE66]","protein_coding"
"At1g27880","No alias","Arabidopsis thaliana","ATP-dependent DNA helicase Q-like 5 [Source:UniProtKB/Swiss-Prot;Acc:Q0WVW7]","protein_coding"
"At1g27900","No alias","Arabidopsis thaliana","Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 [Source:UniProtKB/Swiss-Prot;Acc:Q93Y16]","protein_coding"
"At1g28180","No alias","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:TAIR;Acc:AT1G28180]","protein_coding"
"At1g31360","No alias","Arabidopsis thaliana","RECQ helicase L2 [Source:TAIR;Acc:AT1G31360]","protein_coding"
"At1g31970","No alias","Arabidopsis thaliana","STRS1 [Source:UniProtKB/TrEMBL;Acc:A0A178W5E1]","protein_coding"
"At1g32490","No alias","Arabidopsis thaliana","ESP3 [Source:UniProtKB/TrEMBL;Acc:A0A178W3A5]","protein_coding"
"At1g33390","No alias","Arabidopsis thaliana","FAS4 [Source:UniProtKB/TrEMBL;Acc:A0A178WIP4]","protein_coding"
"At1g35530","No alias","Arabidopsis thaliana","DEAD/DEAH box RNA helicase family protein [Source:UniProtKB/TrEMBL;Acc:F4HYE4]","protein_coding"
"At1g48310","No alias","Arabidopsis thaliana","chromatin remodeling factor18 [Source:TAIR;Acc:AT1G48310]","protein_coding"
"At1g48650","No alias","Arabidopsis thaliana","DEA(D/H)-box RNA helicase family protein [Source:UniProtKB/TrEMBL;Acc:F4HYJ6]","protein_coding"
"At1g50410","No alias","Arabidopsis thaliana","Helicase-like transcription factor CHR28 [Source:UniProtKB/Swiss-Prot;Acc:Q94BR5]","protein_coding"
"At1g51380","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 34 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8J1]","protein_coding"
"At1g54270","No alias","Arabidopsis thaliana","eIF4A-2 [Source:UniProtKB/TrEMBL;Acc:A0A178W4U1]","protein_coding"
"At1g55150","No alias","Arabidopsis thaliana","DEA(D/H)-box RNA helicase family protein [Source:TAIR;Acc:AT1G55150]","protein_coding"
"At1g58050","No alias","Arabidopsis thaliana","DExH-box ATP-dependent RNA helicase DExH4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9C6G0]","protein_coding"
"At1g58060","No alias","Arabidopsis thaliana","DExH-box ATP-dependent RNA helicase DExH7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4I9Q5]","protein_coding"
"At1g59760","No alias","Arabidopsis thaliana","DExH-box ATP-dependent RNA helicase DExH9 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIF2]","protein_coding"
"At1g59990","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 22 [Source:UniProtKB/Swiss-Prot;Acc:Q944S1]","protein_coding"
"At1g61140","No alias","Arabidopsis thaliana","SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein [Source:UniProtKB/TrEMBL;Acc:F4HTG1]","protein_coding"
"At1g63250","No alias","Arabidopsis thaliana","Probable DEAD-box ATP-dependent RNA helicase 48 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8S9]","protein_coding"
"At1g71280","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 55 [Source:UniProtKB/Swiss-Prot;Acc:Q9FVV4]","protein_coding"
"At1g71370","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 49 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXD6]","protein_coding"
"At1g72730","No alias","Arabidopsis thaliana","Eukaryotic initiation factor 4A-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAI7]","protein_coding"
"At1g77030","No alias","Arabidopsis thaliana","Putative DEAD-box ATP-dependent RNA helicase 29 [Source:UniProtKB/Swiss-Prot;Acc:O49289]","protein_coding"
"At2g01130","No alias","Arabidopsis thaliana","DExH-box ATP-dependent RNA helicase DExH5, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:F4IM84]","protein_coding"
"At2g01440","No alias","Arabidopsis thaliana","ATP-dependent DNA helicase homolog RECG, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4INA9]","protein_coding"
"At2g02090","No alias","Arabidopsis thaliana","ETL1 [Source:UniProtKB/TrEMBL;Acc:A0A178VWA6]","protein_coding"
"At2g06990","No alias","Arabidopsis thaliana","DExH-box ATP-dependent RNA helicase DExH10 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVW2]","protein_coding"
"At2g07750","No alias","Arabidopsis thaliana","Putative DEAD-box ATP-dependent RNA helicase 33 [Source:UniProtKB/Swiss-Prot;Acc:O80792]","protein_coding"
"At2g13370","No alias","Arabidopsis thaliana","Protein CHROMATIN REMODELING 5 [Source:UniProtKB/Swiss-Prot;Acc:F4IV99]","protein_coding"
"At2g16390","No alias","Arabidopsis thaliana","SNF2 domain-containing protein / helicase domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8B0G3]","protein_coding"
"At2g18760","No alias","Arabidopsis thaliana","chromatin remodeling 8 [Source:TAIR;Acc:AT2G18760]","protein_coding"
"At2g21450","No alias","Arabidopsis thaliana","chromatin remodeling 34 [Source:TAIR;Acc:AT2G21450]","protein_coding"
"At2g25170","No alias","Arabidopsis thaliana","chromatin remodeling factor CHD3 (PICKLE) [Source:TAIR;Acc:AT2G25170]","protein_coding"
"At2g28290","No alias","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8B2X1]","protein_coding"
"At2g30800","No alias","Arabidopsis thaliana","DExH-box ATP-dependent RNA helicase DExH6 [Source:UniProtKB/Swiss-Prot;Acc:F4INY4]","protein_coding"
"At2g33730","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 21 [Source:UniProtKB/Swiss-Prot;Acc:P93008]","protein_coding"
"At2g35340","No alias","Arabidopsis thaliana","Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH6 [Source:UniProtKB/Swiss-Prot;Acc:F4IJV4]","protein_coding"
"At2g35920","No alias","Arabidopsis thaliana","RNA helicase family protein [Source:TAIR;Acc:AT2G35920]","protein_coding"
"At2g40700","No alias","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:TAIR;Acc:AT2G40700]","protein_coding"
"At2g40770","No alias","Arabidopsis thaliana","RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4II36]","protein_coding"
"At2g42270","No alias","Arabidopsis thaliana","DExH-box ATP-dependent RNA helicase DExH13 [Source:UniProtKB/Swiss-Prot;Acc:O48534]","protein_coding"
"At2g42520","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 37 [Source:UniProtKB/Swiss-Prot;Acc:Q84W89]","protein_coding"
"At2g44980","No alias","Arabidopsis thaliana","Probable helicase CHR10 [Source:UniProtKB/Swiss-Prot;Acc:F4IV45]","protein_coding"
"At2g45810","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q94BV4]","protein_coding"
"At2g46020","No alias","Arabidopsis thaliana","ATP-dependent helicase BRM [Source:UniProtKB/Swiss-Prot;Acc:Q6EVK6]","protein_coding"
"At2g47250","No alias","Arabidopsis thaliana","Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH3 [Source:UniProtKB/Swiss-Prot;Acc:O22899]","protein_coding"
"At2g47330","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 24 [Source:UniProtKB/Swiss-Prot;Acc:O22907]","protein_coding"
"At2g47680","No alias","Arabidopsis thaliana","DExH-box ATP-dependent RNA helicase DExH8 [Source:UniProtKB/Swiss-Prot;Acc:O22243]","protein_coding"
"At3g01540","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 14 [Source:UniProtKB/Swiss-Prot;Acc:Q8H136]","protein_coding"
"At3g02060","No alias","Arabidopsis thaliana","ATP-dependent DNA helicase At3g02060, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4JFJ3]","protein_coding"
"At3g02065","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 41 [Source:UniProtKB/Swiss-Prot;Acc:Q3EBD3]","protein_coding"
"At3g03300","No alias","Arabidopsis thaliana","Endoribonuclease Dicer homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q3EBC8]","protein_coding"
"At3g05740","No alias","Arabidopsis thaliana","ATP-dependent DNA helicase Q-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FT74]","protein_coding"
"At3g06010","No alias","Arabidopsis thaliana","Probable ATP-dependent DNA helicase CHR12 [Source:UniProtKB/Swiss-Prot;Acc:F4J9M5]","protein_coding"
"At3g06400","No alias","Arabidopsis thaliana","Chromatin-remodeling complex ATPase [Source:UniProtKB/TrEMBL;Acc:F4JAV9]","protein_coding"
"At3g06480","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9SQV1]","protein_coding"
"At3g06980","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 50 [Source:UniProtKB/Swiss-Prot;Acc:Q8GUG7]","protein_coding"
"At3g09620","No alias","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRR1]","protein_coding"
"At3g09720","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 57 [Source:UniProtKB/Swiss-Prot;Acc:Q84TG1]","protein_coding"
"At3g12810","No alias","Arabidopsis thaliana","Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 [Source:UniProtKB/Swiss-Prot;Acc:Q7X9V2]","protein_coding"
"At3g13920","No alias","Arabidopsis thaliana","Eukaryotic translation initiation factor 4A1 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSZ7]","protein_coding"
"At3g16600","No alias","Arabidopsis thaliana","SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein [Source:UniProtKB/TrEMBL;Acc:F4J2R0]","protein_coding"
"At3g16840","No alias","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A178VJW0]","protein_coding"
"At3g18600","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 51 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIH9]","protein_coding"
"At3g19210","No alias","Arabidopsis thaliana","Protein CHROMATIN REMODELING 25 [Source:UniProtKB/Swiss-Prot;Acc:Q0PCS3]","protein_coding"
"At3g19760","No alias","Arabidopsis thaliana","Eukaryotic initiation factor 4A-III homolog [Source:UniProtKB/Swiss-Prot;Acc:Q94A52]","protein_coding"
"At3g20010","No alias","Arabidopsis thaliana","Helicase-like transcription factor CHR27 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHE4]","protein_coding"
"At3g22310","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 9, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LUW6]","protein_coding"
"At3g22330","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 53, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LUW5]","protein_coding"
"At3g24340","No alias","Arabidopsis thaliana","SNF2 domain-containing protein CLASSY 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LK10]","protein_coding"
"At3g26560","No alias","Arabidopsis thaliana","Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [Source:UniProtKB/Swiss-Prot;Acc:Q38953]","protein_coding"
"At3g27730","No alias","Arabidopsis thaliana","DNA helicase ROCK-N-ROLLERS [Source:UniProtKB/TrEMBL;Acc:A0A1I9LN50]","protein_coding"
"At3g42670","No alias","Arabidopsis thaliana","Chromatin remodeling 38 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LTS2]","protein_coding"
"At3g43920","No alias","Arabidopsis thaliana","Endoribonuclease Dicer homolog 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXW7]","protein_coding"
"At3g53110","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 38 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZG7]","protein_coding"
"At3g54280","No alias","Arabidopsis thaliana","ROOT GROWTH DEFECTIVE 3 [Source:UniProtKB/TrEMBL;Acc:F4JCU6]","protein_coding"
"At3g54460","No alias","Arabidopsis thaliana","F-box protein At3g54460 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1I1]","protein_coding"
"At3g57300","No alias","Arabidopsis thaliana","DNA helicase INO80-like protein [Source:UniProtKB/TrEMBL;Acc:F4J277]","protein_coding"
"At3g58510","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 11 [Source:UniProtKB/Swiss-Prot;Acc:Q8LA13]","protein_coding"
"At3g58570","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 52 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2F9]","protein_coding"
"At3g61240","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2E0]","protein_coding"
"At3g62310","No alias","Arabidopsis thaliana","Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZQ9]","protein_coding"
"At4g00660","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXK6]","protein_coding"
"At4g01020","No alias","Arabidopsis thaliana","ATP-dependent RNA helicase DEAH11, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P0CE10]","protein_coding"
"At4g09730","No alias","Arabidopsis thaliana","RH39 [Source:UniProtKB/TrEMBL;Acc:A0A178V449]","protein_coding"
"At4g14790","No alias","Arabidopsis thaliana","EDA15 [Source:UniProtKB/TrEMBL;Acc:A0A178V2P1]","protein_coding"
"At4g15850","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q7FGZ2]","protein_coding"
"At4g16630","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 28 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZRZ8]","protein_coding"
"At4g16680","No alias","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:TAIR;Acc:AT4G16680]","protein_coding"
"At4g18465","No alias","Arabidopsis thaliana","Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 [Source:UniProtKB/Swiss-Prot;Acc:F4JRJ6]","protein_coding"
"At4g31900","No alias","Arabidopsis thaliana","CHD3-type chromatin-remodeling factor CHR7 [Source:UniProtKB/Swiss-Prot;Acc:F4JTF6]","protein_coding"
"At4g33370","No alias","Arabidopsis thaliana","Putative DEAD-box ATP-dependent RNA helicase 43 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZB4]","protein_coding"
"At4g34910","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9SW44]","protein_coding"
"At4g35740","No alias","Arabidopsis thaliana","ATP-dependent DNA helicase Q-like 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FT72]","protein_coding"
"At5g04895","No alias","Arabidopsis thaliana","ATP-dependent RNA helicase A-like protein [Source:UniProtKB/TrEMBL;Acc:Q9FF84]","protein_coding"
"At5g05130","No alias","Arabidopsis thaliana","Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FF61]","protein_coding"
"At5g05450","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 18 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLB0]","protein_coding"
"At5g07810","No alias","Arabidopsis thaliana","SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein [Source:TAIR;Acc:AT5G07810]","protein_coding"
"At5g08110","No alias","Arabidopsis thaliana","nucleic acid binding;ATP-dependent helicases;ATP binding;helicases;ATP-dependent helicases [Source:TAIR;Acc:AT5G08110]","protein_coding"
"At5g08610","No alias","Arabidopsis thaliana","PDE340 [Source:UniProtKB/TrEMBL;Acc:A0A178UFQ6]","protein_coding"
"At5g08620","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 25 [Source:UniProtKB/Swiss-Prot;Acc:Q94C75]","protein_coding"
"At5g10370","No alias","Arabidopsis thaliana","ATP-dependent RNA helicase DEAH12, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4KGU4]","protein_coding"
"At5g11170","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 56 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFN6]","protein_coding"
"At5g11200","No alias","Arabidopsis thaliana","DEAD/DEAH box RNA helicase family protein [Source:UniProtKB/TrEMBL;Acc:F4JWF6]","protein_coding"
"At5g13010","No alias","Arabidopsis thaliana","Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7 [Source:UniProtKB/Swiss-Prot;Acc:F4K2E9]","protein_coding"
"At5g14610","No alias","Arabidopsis thaliana","DEAD box RNA helicase family protein [Source:UniProtKB/TrEMBL;Acc:F4K6V1]","protein_coding"
"At5g18620","No alias","Arabidopsis thaliana","Chromatin-remodeling complex ATPase [Source:UniProtKB/TrEMBL;Acc:F4JY25]","protein_coding"
"At5g19210","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 58, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q3E9C3]","protein_coding"
"At5g19310","No alias","Arabidopsis thaliana","Probable ATP-dependent DNA helicase CHR23 [Source:UniProtKB/Swiss-Prot;Acc:F4K128]","protein_coding"
"At5g20320","No alias","Arabidopsis thaliana","Dicer-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:P84634]","protein_coding"
"At5g20420","No alias","Arabidopsis thaliana","SNF2 domain-containing protein CLASSY 2 [Source:UniProtKB/Swiss-Prot;Acc:F4K493]","protein_coding"
"At5g22750","No alias","Arabidopsis thaliana","DNA repair protein RAD5A [Source:UniProtKB/Swiss-Prot;Acc:Q9FNI6]","protein_coding"
"At5g26742","No alias","Arabidopsis thaliana","RH3 [Source:UniProtKB/TrEMBL;Acc:A0A178UT03]","protein_coding"
"At5g27680","No alias","Arabidopsis thaliana","ATP-dependent DNA helicase Q-like SIM [Source:UniProtKB/Swiss-Prot;Acc:Q9FT69]","protein_coding"
"At5g39840","No alias","Arabidopsis thaliana","DExH-box ATP-dependent RNA helicase DExH18, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:F4KFV7]","protein_coding"
"At5g43530","No alias","Arabidopsis thaliana","DNA repair protein RAD5B [Source:UniProtKB/Swiss-Prot;Acc:Q9FIY7]","protein_coding"
"At5g44800","No alias","Arabidopsis thaliana","PKR1 [Source:UniProtKB/TrEMBL;Acc:A0A178UKW2]","protein_coding"
"At5g51280","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 35 [Source:UniProtKB/Swiss-Prot;Acc:Q9LU46]","protein_coding"
"At5g54910","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 32 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFT9]","protein_coding"
"At5g60990","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 10 [Source:UniProtKB/Swiss-Prot;Acc:Q8GY84]","protein_coding"
"At5g61140","No alias","Arabidopsis thaliana","DExH-box ATP-dependent RNA helicase DExH14 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNQ1]","protein_coding"
"At5g62190","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q39189]","protein_coding"
"At5g63120","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 30 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4R3]","protein_coding"
"At5g63630","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 31 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFQ1]","protein_coding"
"At5g63950","No alias","Arabidopsis thaliana","Protein CHROMATIN REMODELING 24 [Source:UniProtKB/Swiss-Prot;Acc:Q8W103]","protein_coding"
"At5g65900","No alias","Arabidopsis thaliana","DEAD-box ATP-dependent RNA helicase 27 [Source:UniProtKB/Swiss-Prot;Acc:Q9SB89]","protein_coding"
"At5g66750","No alias","Arabidopsis thaliana","ATP-dependent DNA helicase DDM1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XFH4]","protein_coding"
"Bradi1g03180","No alias","Brachypodium distachyon","DEAD box RNA helicase (RH3)","protein_coding"
"Bradi1g04860","No alias","Brachypodium distachyon","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Bradi1g05062","No alias","Brachypodium distachyon","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Bradi1g08607","No alias","Brachypodium distachyon","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Bradi1g08847","No alias","Brachypodium distachyon","ATP-dependent RNA helicase, mitochondrial (SUV3)","protein_coding"
"Bradi1g09970","No alias","Brachypodium distachyon","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Bradi1g10360","No alias","Brachypodium distachyon","chromatin remodeling 1","protein_coding"
"Bradi1g11180","No alias","Brachypodium distachyon","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Bradi1g14910","No alias","Brachypodium distachyon","switch 2","protein_coding"
"Bradi1g15440","No alias","Brachypodium distachyon","dicer-like 2","protein_coding"
"Bradi1g16720","No alias","Brachypodium distachyon","chromatin remodeling 38","protein_coding"
"Bradi1g17580","No alias","Brachypodium distachyon","RECQ helicase L2","protein_coding"
"Bradi1g17650","No alias","Brachypodium distachyon","zinc ion binding;DNA binding;helicases;ATP binding;nucleic acid binding","protein_coding"
"Bradi1g18910","No alias","Brachypodium distachyon","chromatin remodeling 5","protein_coding"
"Bradi1g18920","No alias","Brachypodium distachyon","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Bradi1g18930","No alias","Brachypodium distachyon","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Bradi1g19500","No alias","Brachypodium distachyon","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Bradi1g19820","No alias","Brachypodium distachyon","DNA/RNA helicase protein","protein_coding"
"Bradi1g20197","No alias","Brachypodium distachyon","chromatin remodeling factor18","protein_coding"
"Bradi1g20340","No alias","Brachypodium distachyon","RNA helicase 36","protein_coding"
"Bradi1g21030","No alias","Brachypodium distachyon","dicer-like 2","protein_coding"
"Bradi1g21280","No alias","Brachypodium distachyon","helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related","protein_coding"
"Bradi1g21914","No alias","Brachypodium distachyon","nucleic acid binding;ATP-dependent helicases;ATP binding;helicases;ATP-dependent helicases","protein_coding"
"Bradi1g22600","No alias","Brachypodium distachyon","SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein","protein_coding"
"Bradi1g26197","No alias","Brachypodium distachyon","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Bradi1g26440","No alias","Brachypodium distachyon","Helicase protein with RING/U-box domain","protein_coding"
"Bradi1g26607","No alias","Brachypodium distachyon","RNA helicase family protein","protein_coding"
"Bradi1g26940","No alias","Brachypodium distachyon","chromatin remodeling 4","protein_coding"
"Bradi1g34170","No alias","Brachypodium distachyon","eukaryotic translation initiation factor 4A1","protein_coding"
"Bradi1g36730","No alias","Brachypodium distachyon","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Bradi1g38660","No alias","Brachypodium distachyon","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Bradi1g44177","No alias","Brachypodium distachyon","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Bradi1g45620","No alias","Brachypodium distachyon","SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related","protein_coding"
"Bradi1g47367","No alias","Brachypodium distachyon","chromatin remodeling factor CHD3 (PICKLE)","protein_coding"
"Bradi1g52230","No alias","Brachypodium distachyon","RNA helicase, ATP-dependent, SK12/DOB1 protein","protein_coding"
"Bradi1g52650","No alias","Brachypodium distachyon","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Bradi1g57635","No alias","Brachypodium distachyon","SNF2 domain-containing protein / helicase domain-containing protein","protein_coding"
"Bradi1g58250","No alias","Brachypodium distachyon","putative mitochondrial RNA helicase 2","protein_coding"
"Bradi1g61220","No alias","Brachypodium distachyon","RNA helicase family protein","protein_coding"
"Bradi1g62320","No alias","Brachypodium distachyon","INO80 ortholog","protein_coding"
"Bradi1g64190","No alias","Brachypodium distachyon","RNA helicase family protein","protein_coding"
"Bradi1g64410","No alias","Brachypodium distachyon","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Bradi1g70057","No alias","Brachypodium distachyon","U5 small nuclear ribonucleoprotein helicase","protein_coding"
"Bradi1g74070","No alias","Brachypodium distachyon","SNF2 domain-containing protein / helicase domain-containing protein","protein_coding"
"Bradi1g74287","No alias","Brachypodium distachyon","RECQ helicase L2","protein_coding"
"Bradi1g74580","No alias","Brachypodium distachyon","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Bradi1g77087","No alias","Brachypodium distachyon","dicer-like 1","protein_coding"
"Bradi1g78440","No alias","Brachypodium distachyon","SNF2 domain-containing protein / helicase domain-containing protein","protein_coding"
"Bradi2g01360","No alias","Brachypodium distachyon","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Bradi2g03617","No alias","Brachypodium distachyon","chromatin remodeling 8","protein_coding"
"Bradi2g03947","No alias","Brachypodium distachyon","DEAD box RNA helicase family protein","protein_coding"
"Bradi2g03960","No alias","Brachypodium distachyon","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Bradi2g04460","No alias","Brachypodium distachyon","DEAD box RNA helicase 1","protein_coding"
"Bradi2g05390","No alias","Brachypodium distachyon","RH39","protein_coding"
"Bradi2g05990","No alias","Brachypodium distachyon","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Bradi2g06800","No alias","Brachypodium distachyon","RNA helicase family protein","protein_coding"
"Bradi2g09177","No alias","Brachypodium distachyon","zinc finger (CCCH type) helicase family protein","protein_coding"
"Bradi2g12950","No alias","Brachypodium distachyon","chromatin-remodeling protein 11","protein_coding"
"Bradi2g14340","No alias","Brachypodium distachyon","DNA binding;ATP binding;nucleic acid binding;binding;helicases;ATP binding;DNA binding;helicases","protein_coding"
"Bradi2g15606","No alias","Brachypodium distachyon","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Bradi2g21432","No alias","Brachypodium distachyon","SNF2 domain-containing protein / helicase domain-containing protein","protein_coding"
"Bradi2g21450","No alias","Brachypodium distachyon","SNF2 domain-containing protein / helicase domain-containing protein","protein_coding"
"Bradi2g23190","No alias","Brachypodium distachyon","dicer-like 3","protein_coding"
"Bradi2g26500","No alias","Brachypodium distachyon","chromatin remodeling 31","protein_coding"
"Bradi2g26670","No alias","Brachypodium distachyon","RNA helicase family protein","protein_coding"
"Bradi2g35707","No alias","Brachypodium distachyon","RECQ helicase SIM","protein_coding"
"Bradi2g35740","No alias","Brachypodium distachyon","chromatin-remodeling protein 11","protein_coding"
"Bradi2g36380","No alias","Brachypodium distachyon","Homeotic gene regulator","protein_coding"
"Bradi2g39180","No alias","Brachypodium distachyon","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Bradi2g40760","No alias","Brachypodium distachyon","DEAD box RNA helicase family protein","protein_coding"
"Bradi2g40780","No alias","Brachypodium distachyon","DEAD/DEAH box RNA helicase family protein","protein_coding"
"Bradi2g40800","No alias","Brachypodium distachyon","DEAD/DEAH box RNA helicase family protein","protein_coding"
"Bradi2g40807","No alias","Brachypodium distachyon","DEAD/DEAH box RNA helicase family protein","protein_coding"
"Bradi2g42210","No alias","Brachypodium distachyon","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Bradi2g42340","No alias","Brachypodium distachyon","SNF2 domain-containing protein / helicase domain-containing protein","protein_coding"
"Bradi2g43501","No alias","Brachypodium distachyon","chromatin remodeling 31","protein_coding"
"Bradi2g43710","No alias","Brachypodium distachyon","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Bradi2g43720","No alias","Brachypodium distachyon","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Bradi2g51017","No alias","Brachypodium distachyon","helicase in vascular tissue and tapetum","protein_coding"
"Bradi2g51727","No alias","Brachypodium distachyon","SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related","protein_coding"
"Bradi2g56865","No alias","Brachypodium distachyon","chromatin remodeling factor CHD3 (PICKLE)","protein_coding"
"Bradi2g58360","No alias","Brachypodium distachyon","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Bradi2g60850","No alias","Brachypodium distachyon","SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein","protein_coding"
"Bradi2g61960","No alias","Brachypodium distachyon","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Bradi3g00980","No alias","Brachypodium distachyon","U5 small nuclear ribonucleoprotein helicase, putative","protein_coding"
"Bradi3g01240","No alias","Brachypodium distachyon","nucleic acid binding;ATP-dependent helicases;ATP binding;helicases;ATP-dependent helicases","protein_coding"
"Bradi3g01297","No alias","Brachypodium distachyon","transcription regulatory protein SNF2, putative","protein_coding"
"Bradi3g03570","No alias","Brachypodium distachyon","RNA helicase family protein","protein_coding"
"Bradi3g03710","No alias","Brachypodium distachyon","eukaryotic translation initiation factor 4A1","protein_coding"
"Bradi3g03990","No alias","Brachypodium distachyon","DEAD-box protein abstrakt, putative","protein_coding"
"Bradi3g07457","No alias","Brachypodium distachyon","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Bradi3g08301","No alias","Brachypodium distachyon","eukaryotic translation initiation factor 4A1","protein_coding"
"Bradi3g13460","No alias","Brachypodium distachyon","ATP-dependent RNA helicase, putative","protein_coding"
"Bradi3g15380","No alias","Brachypodium distachyon","SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related","protein_coding"
"Bradi3g19890","No alias","Brachypodium distachyon","SNF2 domain-containing protein / helicase domain-containing protein","protein_coding"
"Bradi3g22680","No alias","Brachypodium distachyon","ATP-dependent RNA helicase, putative","protein_coding"
"Bradi3g27970","No alias","Brachypodium distachyon","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Bradi3g28477","No alias","Brachypodium distachyon","RNA helicase family protein","protein_coding"
"Bradi3g29287","No alias","Brachypodium distachyon","dicer-like 3","protein_coding"
"Bradi3g30250","No alias","Brachypodium distachyon","RNAhelicase-like 8","protein_coding"
"Bradi3g35860","No alias","Brachypodium distachyon","hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides;ATP-dependent helicases;nucleic acid binding;ATP binding;RNA binding;helicases","protein_coding"
"Bradi3g44690","No alias","Brachypodium distachyon","DNA/RNA helicase protein","protein_coding"
"Bradi3g48850","No alias","Brachypodium distachyon","ATP binding;ATP-dependent helicases;DNA helicases","protein_coding"
"Bradi3g49680","No alias","Brachypodium distachyon","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Bradi3g49980","No alias","Brachypodium distachyon","RNAhelicase-like 8","protein_coding"
"Bradi3g50300","No alias","Brachypodium distachyon","chromatin remodeling 31","protein_coding"
"Bradi3g53090","No alias","Brachypodium distachyon","DEAD/DEAH box RNA helicase family protein","protein_coding"
"Bradi3g54080","No alias","Brachypodium distachyon","RNA helicase 1","protein_coding"
"Bradi3g56100","No alias","Brachypodium distachyon","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Bradi3g57087","No alias","Brachypodium distachyon","DEAD/DEAH box RNA helicase family protein","protein_coding"
"Bradi3g58092","No alias","Brachypodium distachyon","homolog of RAD54","protein_coding"
"Bradi3g59870","No alias","Brachypodium distachyon","RNA helicase family protein","protein_coding"
"Bradi3g60590","No alias","Brachypodium distachyon","eukaryotic initiation factor 4A-III","protein_coding"
"Bradi4g02000","No alias","Brachypodium distachyon","putative mitochondrial RNA helicase 1","protein_coding"
"Bradi4g07397","No alias","Brachypodium distachyon","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Bradi4g08150","No alias","Brachypodium distachyon","helicases;ATP-dependent helicases;nucleic acid binding;ATP binding;DNA-directed DNA polymerases;DNA binding","protein_coding"
"Bradi4g09970","No alias","Brachypodium distachyon","chromatin-remodeling protein 11","protein_coding"
"Bradi4g10110","No alias","Brachypodium distachyon","RECQ helicase l1","protein_coding"
"Bradi4g13830","No alias","Brachypodium distachyon","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Bradi4g14490","No alias","Brachypodium distachyon","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Bradi4g16730","No alias","Brachypodium distachyon","RNA helicase family protein","protein_coding"
"Bradi4g17160","No alias","Brachypodium distachyon","DEAD/DEAH box helicase, putative","protein_coding"
"Bradi4g19990","No alias","Brachypodium distachyon","RNA helicase family protein","protein_coding"
"Bradi4g23960","No alias","Brachypodium distachyon","DEAD/DEAH box RNA helicase family protein","protein_coding"
"Bradi4g24170","No alias","Brachypodium distachyon","RNA helicase, ATP-dependent, SK12/DOB1 protein","protein_coding"
"Bradi4g26910","No alias","Brachypodium distachyon","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Bradi4g29520","No alias","Brachypodium distachyon","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Bradi4g35490","No alias","Brachypodium distachyon","DEAD box RNA helicase (PRH75)","protein_coding"
"Bradi4g40476","No alias","Brachypodium distachyon","chromatin remodeling 24","protein_coding"
"Bradi4g41160","No alias","Brachypodium distachyon","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Bradi5g00770","No alias","Brachypodium distachyon","Helicase protein with RING/U-box domain","protein_coding"
"Bradi5g10330","No alias","Brachypodium distachyon","RNA helicase family protein","protein_coding"
"Bradi5g10432","No alias","Brachypodium distachyon","DNA helicase (RECQl4A)","protein_coding"
"Bradi5g12360","No alias","Brachypodium distachyon","ATP-dependent RNA helicase, mitochondrial, putative","protein_coding"
"Bradi5g13920","No alias","Brachypodium distachyon","DEAD/DEAH box RNA helicase family protein","protein_coding"
"Bradi5g15337","No alias","Brachypodium distachyon","dicer-like 4","protein_coding"
"Bradi5g15377","No alias","Brachypodium distachyon","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Bradi5g16700","No alias","Brachypodium distachyon","RNAhelicase-like 8","protein_coding"
"Bradi5g18520","No alias","Brachypodium distachyon","SNF2 domain-containing protein / helicase domain-containing protein","protein_coding"
"Bradi5g22745","No alias","Brachypodium distachyon","SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related","protein_coding"
"Bradi5g27610","No alias","Brachypodium distachyon","chromatin remodeling 24","protein_coding"
"Brara.A00335.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A00523.1","No alias","Brassica rapa","DNA polymerase theta *(TEB)","protein_coding"
"Brara.A00587.1","No alias","Brassica rapa","CHD3-type chromatin remodeling factor *(PKL/PKR)","protein_coding"
"Brara.A01870.1","No alias","Brassica rapa","RNA helicase *(Prp2)","protein_coding"
"Brara.A01876.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A01936.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A01952.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A02036.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A02207.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A02352.1","No alias","Brassica rapa","RNA helicase component *(MTR4) of TRAMP nucleolar regulation complex","protein_coding"
"Brara.A02449.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A02729.1","No alias","Brassica rapa","group-II intron splicing RNA helicase *(PMH)","protein_coding"
"Brara.A02854.1","No alias","Brassica rapa","helicase component *(eIF4A3) of RNA quality control Exon Junction complex","protein_coding"
"Brara.A02921.1","No alias","Brassica rapa","regulatory RNA helicase *(RH27/RH51) of miRNA biogenesis pathway","protein_coding"
"Brara.A03036.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A03225.1","No alias","Brassica rapa","mRNA unwinding factor *(eIF4A))","protein_coding"
"Brara.A03515.1","No alias","Brassica rapa","rRNA biogenesis RNA helicase *(ROK1)","protein_coding"
"Brara.A03677.1","No alias","Brassica rapa","SMARCA component *(SYD/BRM/MINU)","protein_coding"
"Brara.A03944.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A03951.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.A03952.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B00177.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B00293.1","No alias","Brassica rapa","mRNA helicase *(RH31)","protein_coding"
"Brara.B00396.1","No alias","Brassica rapa","helicase UAP56","protein_coding"
"Brara.B00397.1","No alias","Brassica rapa","helicase UAP56","protein_coding"
"Brara.B00468.1","No alias","Brassica rapa","RNA helicase *(Prp16)","protein_coding"
"Brara.B00559.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B00782.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B00808.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B01383.1","No alias","Brassica rapa","RNA helicase *(Brr2)","protein_coding"
"Brara.B02039.1","No alias","Brassica rapa","mRNA unwinding factor *(eIF4A))","protein_coding"
"Brara.B02496.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B02556.1","No alias","Brassica rapa","DDX6-type mRNA helicase *(RH12/RH8)","protein_coding"
"Brara.B03286.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B03310.1","No alias","Brassica rapa","DNA helicase *(RCK/MER3)","protein_coding"
"Brara.B03601.1","No alias","Brassica rapa","group-II intron splicing RNA helicase *(RH3)","protein_coding"
"Brara.B03744.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B03751.1","No alias","Brassica rapa","RNA helicase *(Brr2)","protein_coding"
"Brara.B03801.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C00315.1","No alias","Brassica rapa","chromatin remodeling factor *(SMARCAL1)","protein_coding"
"Brara.C00415.1","No alias","Brassica rapa","E3 ubiquitin ligase *(RBR-Helicase)","protein_coding"
"Brara.C00453.1","No alias","Brassica rapa","helicase UAP56","protein_coding"
"Brara.C01014.1","No alias","Brassica rapa","chromatin remodeling factor *(Rad5)","protein_coding"
"Brara.C01717.1","No alias","Brassica rapa","RNA helicase *(SMA1)","protein_coding"
"Brara.C01807.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C01994.1","No alias","Brassica rapa","SMARCA component *(SYD/BRM/MINU)","protein_coding"
"Brara.C02356.1","No alias","Brassica rapa","RNA helicase Prp43 of Intron-Lariat Spliceosome complex","protein_coding"
"Brara.C02360.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C02616.1","No alias","Brassica rapa","23S-rRNA maturation helicase *(RH39)","protein_coding"
"Brara.C02900.1","No alias","Brassica rapa","DDX6-type mRNA helicase *(RH12/RH8)","protein_coding"
"Brara.C02943.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C03156.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C03196.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.C03500.1","No alias","Brassica rapa","mRNA unwinding factor *(eIF4A))","protein_coding"
"Brara.C03695.1","No alias","Brassica rapa","regulatory RNA helicase *(RH27/RH51) of miRNA biogenesis pathway","protein_coding"
"Brara.C03756.1","No alias","Brassica rapa","helicase component *(eIF4A3) of RNA quality control Exon Junction complex","protein_coding"
"Brara.C03768.1","No alias","Brassica rapa","chromatin remodeling factor *(Ris1)","protein_coding"
"Brara.C03948.1","No alias","Brassica rapa","regulatory protein *(CLSY3/4) of transacting siRNA pathway","protein_coding"
"Brara.C04143.1","No alias","Brassica rapa","component *(DRD1) of DNA methylation accessory complex","protein_coding"
"Brara.C04220.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.D00294.1","No alias","Brassica rapa","ATPase component *(Ino80) of chromatin remodelling complex","protein_coding"
"Brara.D00466.1","No alias","Brassica rapa","chromatin remodeling factor *(SHPRH)","protein_coding"
"Brara.D00543.1","No alias","Brassica rapa","ATP-dependent helicase *(DBP5/LOS4)","protein_coding"
"Brara.D00993.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.D01844.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.D02022.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.D02052.1","No alias","Brassica rapa","RNA helicase *(SMA1)","protein_coding"
"Brara.D02486.1","No alias","Brassica rapa","chromatin remodeling factor *(SHPRH)","protein_coding"
"Brara.D02584.1","No alias","Brassica rapa","sRNA cargo-loading helicase *(RH11/37) of extracellular vesicle trafficking","protein_coding"
"Brara.D02768.1","No alias","Brassica rapa","DDX6-type mRNA helicase *(RH12/RH8)","protein_coding"
"Brara.E00021.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E00059.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E00183.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E00474.1","No alias","Brassica rapa","chromatin remodeling factor *(ALC1)","protein_coding"
"Brara.E01268.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E01515.1","No alias","Brassica rapa","mRNA unwinding factor *(eIF4A))","protein_coding"
"Brara.E01722.1","No alias","Brassica rapa","group-II intron splicing RNA helicase *(PMH)","protein_coding"
"Brara.E01777.1","No alias","Brassica rapa","RNA helicase *(Prp2)","protein_coding"
"Brara.E01856.1","No alias","Brassica rapa","DNA translocase component *(FANCM) of FANCM-MHF DNA remodeling complex","protein_coding"
"Brara.E01921.1","No alias","Brassica rapa","chromatin remodeling factor *(SMARCAL1)","protein_coding"
"Brara.E02231.1","No alias","Brassica rapa","helicase component *(eIF4A3) of RNA quality control Exon Junction complex","protein_coding"
"Brara.E02283.1","No alias","Brassica rapa","chromatin remodeling factor *(RAD54)","protein_coding"
"Brara.E02336.1","No alias","Brassica rapa","regulatory RNA helicase *(RH27/RH51) of miRNA biogenesis pathway","protein_coding"
"Brara.E02728.1","No alias","Brassica rapa","mRNA unwinding factor *(eIF4A))","protein_coding"
"Brara.E02823.1","No alias","Brassica rapa","ATPase component *(PIE1) of SWR1 chromatin remodeling complex","protein_coding"
"Brara.E03073.1","No alias","Brassica rapa","RNA helicase component *(HEN2) of Nuclear Exosome Targeting (NEXT) activation complex","protein_coding"
"Brara.E03077.1","No alias","Brassica rapa","RNA helicase *(RCF1)","protein_coding"
"Brara.E03248.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E03344.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.E03521.1","No alias","Brassica rapa","endoribonuclease (DCL2) of transacting siRNA pathway","protein_coding"
"Brara.F00053.1","No alias","Brassica rapa","mRNA unwinding factor *(eIF4A))","protein_coding"
"Brara.F00312.1","No alias","Brassica rapa","chromatin remodeling factor *(Ris1)","protein_coding"
"Brara.F00410.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F00539.1","No alias","Brassica rapa","chromatin remodeling factor *(ATRX)","protein_coding"
"Brara.F01494.1","No alias","Brassica rapa","RNA helicase *(RCF1)","protein_coding"
"Brara.F01924.1","No alias","Brassica rapa","endoribonuclease *(DCL3)","protein_coding"
"Brara.F02248.1","No alias","Brassica rapa","mRNA helicase *(RH31)","protein_coding"
"Brara.F02275.1","No alias","Brassica rapa","chromatin remodeling factor *(ERCC6)","protein_coding"
"Brara.F02458.1","No alias","Brassica rapa","regulatory RNA helicase *(RH27/RH51) of miRNA biogenesis pathway","protein_coding"
"Brara.F02796.1","No alias","Brassica rapa","group-II intron splicing RNA helicase *(RH3)","protein_coding"
"Brara.F02850.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F03486.1","No alias","Brassica rapa","DNA translocase *(RecG)","protein_coding"
"Brara.F03504.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.F03801.1","No alias","Brassica rapa","chromatin remodeling factor *(Rad5)","protein_coding"
"Brara.G00620.1","No alias","Brassica rapa","regulatory protein *(CLSY3/4) of transacting siRNA pathway","protein_coding"
"Brara.G00828.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G01078.1","No alias","Brassica rapa","RNA helicase *(Brr2)","protein_coding"
"Brara.G01150.1","No alias","Brassica rapa","chromatin remodeling factor *(Ris1)","protein_coding"
"Brara.G01221.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G01569.1","No alias","Brassica rapa","ATP-dependent helicase *(DBP5/LOS4)","protein_coding"
"Brara.G01802.1","No alias","Brassica rapa","sRNA cargo-loading helicase *(RH11/37) of extracellular vesicle trafficking","protein_coding"
"Brara.G01805.1","No alias","Brassica rapa","sRNA cargo-loading helicase *(RH11/37) of extracellular vesicle trafficking","protein_coding"
"Brara.G02035.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G02154.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.G03149.1","No alias","Brassica rapa","mRNA unwinding factor *(eIF4A))","protein_coding"
"Brara.G03726.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H00081.1","No alias","Brassica rapa","regulatory RNA helicase *(RH20/RH30) of virus replication","protein_coding"
"Brara.H00095.1","No alias","Brassica rapa","mRNA unwinding factor *(eIF4A))","protein_coding"
"Brara.H00233.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H00627.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H00717.1","No alias","Brassica rapa","component *(MED34) of MEDIATOR transcription co-activator complex","protein_coding"
"Brara.H00871.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H00901.1","No alias","Brassica rapa","RDR2-polymerase accessory protein *(CLSY1/2) & regulatory protein *(CLSY3/4) of transacting siRNA pathway","protein_coding"
"Brara.H01126.1","No alias","Brassica rapa","RNA helicase *(Brr2)","protein_coding"
"Brara.H01171.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H01306.1","No alias","Brassica rapa","DNA polymerase theta *(TEB)","protein_coding"
"Brara.H01635.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H02028.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H02136.1","No alias","Brassica rapa","RNA helicase *(Prp22)","protein_coding"
"Brara.H02641.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.H02738.1","No alias","Brassica rapa","helicase component *(RecQ4A) of RTR Holliday junction dissolution complex","protein_coding"
"Brara.H03012.1","No alias","Brassica rapa","chromatin remodeling factor *(Rad5-like)","protein_coding"
"Brara.I00038.1","No alias","Brassica rapa","DDX6-type mRNA helicase *(RH12/RH8)","protein_coding"
"Brara.I00503.1","No alias","Brassica rapa","group-II intron splicing RNA helicase *(RH3)","protein_coding"
"Brara.I00682.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I00728.1","No alias","Brassica rapa","regulatory RNA helicase *(RH20/RH30) of virus replication","protein_coding"
"Brara.I00942.1","No alias","Brassica rapa","CHD1-type chromatin remodeling factor *(CHR5) & component *(CHR5) of SAGA transcription co-activator complex","protein_coding"
"Brara.I01399.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I01528.1","No alias","Brassica rapa","helicase component *(RecQ4A) of RTR Holliday junction dissolution complex","protein_coding"
"Brara.I01587.1","No alias","Brassica rapa","RNA helicase component *(MTR4) of TRAMP nucleolar regulation complex","protein_coding"
"Brara.I01640.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I01861.1","No alias","Brassica rapa","CHD3-type chromatin remodeling factor *(PKL/PKR)","protein_coding"
"Brara.I02052.1","No alias","Brassica rapa","ATPase component *(Etl1)","protein_coding"
"Brara.I02497.1","No alias","Brassica rapa","23S-rRNA maturation helicase *(RH39)","protein_coding"
"Brara.I02658.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.I03112.1","No alias","Brassica rapa","RNA helicase *(Prp22)","protein_coding"
"Brara.I03698.1","No alias","Brassica rapa","TATA box-binding protein-associated factor *(MOT1) & chromatin remodeling factor *(Mot1)","protein_coding"
"Brara.I04031.1","No alias","Brassica rapa","sRNA cargo-loading helicase *(RH11/37) of extracellular vesicle trafficking","protein_coding"
"Brara.I04034.1","No alias","Brassica rapa","sRNA cargo-loading helicase *(RH11/37) of extracellular vesicle trafficking","protein_coding"
"Brara.I04217.1","No alias","Brassica rapa","DDX6-type mRNA helicase *(RH12/RH8)","protein_coding"
"Brara.I04306.1","No alias","Brassica rapa","RNA helicase Prp43 of Intron-Lariat Spliceosome complex","protein_coding"
"Brara.I04444.1","No alias","Brassica rapa","CHD3-type chromatin remodeling factor *(PKL/PKR)","protein_coding"
"Brara.I04886.1","No alias","Brassica rapa","SSU processome assembly factor *(SWA3)","protein_coding"
"Brara.I05197.1","No alias","Brassica rapa","helicase component *(RecQ4A) of RTR Holliday junction dissolution complex","protein_coding"
"Brara.I05526.1","No alias","Brassica rapa","chromatin remodeling factor *(ERCC6)","protein_coding"
"Brara.J00078.1","No alias","Brassica rapa","endoribonuclease component *(DCL1) of DCL1-HYL1 miRNA biogenesis complex","protein_coding"
"Brara.J00330.1","No alias","Brassica rapa","chromatin remodeling factor *(Rad5-like)","protein_coding"
"Brara.J00334.1","No alias","Brassica rapa","chromatin remodeling factor *(Rad5-like)","protein_coding"
"Brara.J00372.1","No alias","Brassica rapa","regulatory protein *(CLSY3/4) of transacting siRNA pathway","protein_coding"
"Brara.J00951.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J01574.1","No alias","Brassica rapa","RDR2-polymerase accessory protein *(CLSY1/2)","protein_coding"
"Brara.J01580.1","No alias","Brassica rapa","endoribonuclease (DCL4) of transacting siRNA pathway","protein_coding"
"Brara.J01708.1","No alias","Brassica rapa","ATPase component *(CHR11/CHR17) of ISWI chromatin remodeling complexes","protein_coding"
"Brara.J02249.1","No alias","Brassica rapa","helicase UAP56","protein_coding"
"Brara.J02250.1","No alias","Brassica rapa","helicase UAP56","protein_coding"
"Brara.J02317.1","No alias","Brassica rapa","E3 ubiquitin ligase *(RBR-Helicase)","protein_coding"
"Brara.J02410.1","No alias","Brassica rapa","mRNA helicase *(RH31)","protein_coding"
"Brara.J02411.1","No alias","Brassica rapa","mRNA helicase *(RH31)","protein_coding"
"Brara.J02453.1","No alias","Brassica rapa","crosslink repair helicase *(HRQ1)","protein_coding"
"Brara.J02658.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J02684.1","No alias","Brassica rapa","chromatin remodeling factor *(Rad5)","protein_coding"
"Brara.J02700.1","No alias","Brassica rapa","group-I intron splicing RNA helicase *(ABO6)","protein_coding"
"Brara.K00911.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.K00949.1","No alias","Brassica rapa","chromatin remodeling factor *(Ris1)","protein_coding"
"Brara.K01060.1","No alias","Brassica rapa","SMARCA component *(SYD/BRM/MINU)","protein_coding"
"Brara.K01116.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.K01162.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.K01890.1","No alias","Brassica rapa","chromatin remodeling factor *(ERCC6) & DNA repair protein *(CSB/ERCC6)","protein_coding"
"Cre01.g021600","No alias","Chlamydomonas reinhardtii","DEAD box RNA helicase 1","protein_coding"
"Cre01.g021850","No alias","Chlamydomonas reinhardtii","DEAD/DEAH box RNA helicase family protein","protein_coding"
"Cre01.g022350","No alias","Chlamydomonas reinhardtii","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Cre01.g024251","No alias","Chlamydomonas reinhardtii","RNA helicase family protein","protein_coding"
"Cre01.g028200","No alias","Chlamydomonas reinhardtii","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Cre01.g033832","No alias","Chlamydomonas reinhardtii","RH39","protein_coding"
"Cre01.g037900","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding"
"Cre01.g046237","No alias","Chlamydomonas reinhardtii","SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related","protein_coding"
"Cre01.g051550","No alias","Chlamydomonas reinhardtii","ATP-dependent RNA helicase, putative","protein_coding"
"Cre02.g087600","No alias","Chlamydomonas reinhardtii","SNF2 domain-containing protein / helicase domain-containing protein","protein_coding"
"Cre02.g090500","No alias","Chlamydomonas reinhardtii","RNAhelicase-like 8","protein_coding"
"Cre02.g117900","No alias","Chlamydomonas reinhardtii","RNA helicase, ATP-dependent, SK12/DOB1 protein","protein_coding"
"Cre02.g118300","No alias","Chlamydomonas reinhardtii","DEAD box RNA helicase (PRH75)","protein_coding"
"Cre02.g141000","No alias","Chlamydomonas reinhardtii","dicer-like 1","protein_coding"
"Cre02.g143800","No alias","Chlamydomonas reinhardtii","switch 2","protein_coding"
"Cre03.g156150","No alias","Chlamydomonas reinhardtii","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Cre03.g158550","No alias","Chlamydomonas reinhardtii","chromatin remodeling factor CHD3 (PICKLE)","protein_coding"
"Cre03.g158750","No alias","Chlamydomonas reinhardtii","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Cre03.g162701","No alias","Chlamydomonas reinhardtii","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Cre03.g166650","No alias","Chlamydomonas reinhardtii","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Cre03.g171650","No alias","Chlamydomonas reinhardtii","RNA helicase family protein","protein_coding"
"Cre03.g178950","No alias","Chlamydomonas reinhardtii","RECQ helicase l1","protein_coding"
"Cre03.g179300","No alias","Chlamydomonas reinhardtii","chromatin remodeling 5","protein_coding"
"Cre03.g182950","No alias","Chlamydomonas reinhardtii","RNA helicase family protein","protein_coding"
"Cre03.g183350","No alias","Chlamydomonas reinhardtii","chromatin remodeling 24","protein_coding"
"Cre03.g187700","No alias","Chlamydomonas reinhardtii","nucleic acid binding;ATP-dependent helicases;ATP binding;helicases;ATP-dependent helicases","protein_coding"
"Cre03.g188550","No alias","Chlamydomonas reinhardtii","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Cre03.g188750","No alias","Chlamydomonas reinhardtii","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Cre03.g189000","No alias","Chlamydomonas reinhardtii","homolog of RAD54","protein_coding"
"Cre03.g199350","No alias","Chlamydomonas reinhardtii","chromatin remodeling factor18","protein_coding"
"Cre03.g199647","No alias","Chlamydomonas reinhardtii","eukaryotic initiation factor 4A-III","protein_coding"
"Cre03.g200095","No alias","Chlamydomonas reinhardtii","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Cre03.g201850","No alias","Chlamydomonas reinhardtii","homolog of RAD54","protein_coding"
"Cre03.g208833","No alias","Chlamydomonas reinhardtii","DEAD/DEAH box RNA helicase family protein","protein_coding"
"Cre03.g210625","No alias","Chlamydomonas reinhardtii","DNA/RNA helicase protein","protein_coding"
"Cre03.g213649","No alias","Chlamydomonas reinhardtii","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Cre04.g219750","No alias","Chlamydomonas reinhardtii","DNA helicase (RECQl4A)","protein_coding"
"Cre04.g223850","No alias","Chlamydomonas reinhardtii","RNAhelicase-like 8","protein_coding"
"Cre05.g236950","No alias","Chlamydomonas reinhardtii","SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein","protein_coding"
"Cre05.g238900","No alias","Chlamydomonas reinhardtii","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Cre05.g241635","No alias","Chlamydomonas reinhardtii","dicer-like 1","protein_coding"
"Cre06.g266416","No alias","Chlamydomonas reinhardtii","RNA helicase family protein","protein_coding"
"Cre06.g270850","No alias","Chlamydomonas reinhardtii","chromatin remodeling 8","protein_coding"
"Cre06.g282600","No alias","Chlamydomonas reinhardtii","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Cre06.g287950","No alias","Chlamydomonas reinhardtii","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Cre06.g289950","No alias","Chlamydomonas reinhardtii","RNA helicase, ATP-dependent, SK12/DOB1 protein","protein_coding"
"Cre06.g291150","No alias","Chlamydomonas reinhardtii","DEAD box RNA helicase family protein","protein_coding"
"Cre06.g298650","No alias","Chlamydomonas reinhardtii","eukaryotic translation initiation factor 4A1","protein_coding"
"Cre06.g306850","No alias","Chlamydomonas reinhardtii","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Cre07.g313000","No alias","Chlamydomonas reinhardtii","dicer-like 1","protein_coding"
"Cre07.g313206","No alias","Chlamydomonas reinhardtii","dicer-like 4","protein_coding"
"Cre07.g314900","No alias","Chlamydomonas reinhardtii","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Cre07.g319750","No alias","Chlamydomonas reinhardtii","RNA helicase 1","protein_coding"
"Cre07.g329150","No alias","Chlamydomonas reinhardtii","RNA helicase family protein","protein_coding"
"Cre07.g334200","No alias","Chlamydomonas reinhardtii","DEAD-box protein abstrakt, putative","protein_coding"
"Cre07.g345900","No alias","Chlamydomonas reinhardtii","dicer-like 1","protein_coding"
"Cre07.g349100","No alias","Chlamydomonas reinhardtii","RNA helicase family protein","protein_coding"
"Cre07.g349300","No alias","Chlamydomonas reinhardtii","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Cre07.g351600","No alias","Chlamydomonas reinhardtii","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Cre07.g352251","No alias","Chlamydomonas reinhardtii","RNA helicase family protein","protein_coding"
"Cre08.g368300","No alias","Chlamydomonas reinhardtii","dicer-like 1","protein_coding"
"Cre08.g377200","No alias","Chlamydomonas reinhardtii","chromatin remodeling factor CHD3 (PICKLE)","protein_coding"
"Cre08.g384390","No alias","Chlamydomonas reinhardtii","helicases;ATP-dependent helicases;nucleic acid binding;ATP binding;DNA-directed DNA polymerases;DNA binding","protein_coding"
"Cre09.g390000","No alias","Chlamydomonas reinhardtii","chromatin remodeling factor17","protein_coding"
"Cre10.g420900","No alias","Chlamydomonas reinhardtii","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Cre10.g427700","No alias","Chlamydomonas reinhardtii","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Cre10.g430950","No alias","Chlamydomonas reinhardtii","homolog of RAD54","protein_coding"
"Cre10.g436650","No alias","Chlamydomonas reinhardtii","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Cre11.g467654","No alias","Chlamydomonas reinhardtii","RNA helicase family protein","protein_coding"
"Cre11.g479300","No alias","Chlamydomonas reinhardtii","Helicase protein with RING/U-box domain","protein_coding"
"Cre12.g490150","No alias","Chlamydomonas reinhardtii","RECQ helicase SIM","protein_coding"
"Cre12.g492450","No alias","Chlamydomonas reinhardtii","RNA helicase family protein","protein_coding"
"Cre12.g502350","No alias","Chlamydomonas reinhardtii","RECQ helicase L2","protein_coding"
"Cre12.g505200","No alias","Chlamydomonas reinhardtii","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Cre12.g508150","No alias","Chlamydomonas reinhardtii","chromatin-remodeling protein 11","protein_coding"
"Cre12.g513701","No alias","Chlamydomonas reinhardtii","hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides;ATP-dependent helicases;nucleic acid binding;ATP binding;RNA binding;helicases","protein_coding"
"Cre12.g520150","No alias","Chlamydomonas reinhardtii","RNA helicase family protein","protein_coding"
"Cre12.g522850","No alias","Chlamydomonas reinhardtii","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Cre12.g526850","No alias","Chlamydomonas reinhardtii","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Cre12.g537671","No alias","Chlamydomonas reinhardtii","chromatin remodeling 4","protein_coding"
"Cre12.g539100","No alias","Chlamydomonas reinhardtii","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Cre12.g540200","No alias","Chlamydomonas reinhardtii","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Cre13.g592150","No alias","Chlamydomonas reinhardtii","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Cre14.g614400","No alias","Chlamydomonas reinhardtii","DNA/RNA helicase protein","protein_coding"
"Cre14.g618860","No alias","Chlamydomonas reinhardtii","SNF2 domain-containing protein / helicase domain-containing protein","protein_coding"
"Cre16.g647602","No alias","Chlamydomonas reinhardtii","chromatin remodeling 1","protein_coding"
"Cre16.g661900","No alias","Chlamydomonas reinhardtii","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Cre16.g662000","No alias","Chlamydomonas reinhardtii","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Cre16.g664301","No alias","Chlamydomonas reinhardtii","helicases;ATP-dependent helicases;nucleic acid binding;ATP binding;DNA-directed DNA polymerases;DNA binding","protein_coding"
"Cre16.g673393","No alias","Chlamydomonas reinhardtii","DEAD/DEAH box RNA helicase family protein","protein_coding"
"Cre16.g676400","No alias","Chlamydomonas reinhardtii","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Cre16.g683500","No alias","Chlamydomonas reinhardtii","RNA helicase 36","protein_coding"
"Cre16.g684715","No alias","Chlamydomonas reinhardtii","dicer-like 1","protein_coding"
"Cre16.g687301","No alias","Chlamydomonas reinhardtii","DNA binding;ATP binding;nucleic acid binding;binding;helicases;ATP binding;DNA binding;helicases","protein_coding"
"Cre17.g719000","No alias","Chlamydomonas reinhardtii","DEAD/DEAH box RNA helicase family protein","protein_coding"
"Cre17.g727700","No alias","Chlamydomonas reinhardtii","DEAD box RNA helicase (RH3)","protein_coding"
"Cre17.g744147","No alias","Chlamydomonas reinhardtii","U5 small nuclear ribonucleoprotein helicase, putative","protein_coding"
"Cre24.g755347","No alias","Chlamydomonas reinhardtii","RNA helicase family protein","protein_coding"
"evm.model.contig_2013.1","No alias","Porphyridium purpureum","(at5g08110 : 250.0) nucleic acid binding;ATP-dependent helicases;ATP binding;helicases;ATP-dependent helicases; FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), Ubiquitin supergroup (InterPro:IPR019955), Protein of unknown function DUF1998 (InterPro:IPR018973), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G40700.1); Has 14986 Blast hits to 14312 proteins in 2354 species: Archae - 833; Bacteria - 9982; Metazoa - 976; Fungi - 914; Plants - 633; Viruses - 5; Other Eukaryotes - 1643 (source: NCBI BLink). & (reliability: 500.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2025.15","No alias","Porphyridium purpureum","(at2g40700 : 288.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G65900.1); Has 40440 Blast hits to 37904 proteins in 2977 species: Archae - 739; Bacteria - 19708; Metazoa - 6217; Fungi - 4486; Plants - 2481; Viruses - 5; Other Eukaryotes - 6804 (source: NCBI BLink). & (q41382|rh7_spiol : 118.0) DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) & (reliability: 576.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2030.5","No alias","Porphyridium purpureum","(at4g09730 : 131.0) Encodes RH39, a DEAD-box protein involved in the introduction of the hidden break into the 23S rRNA in the chloroplasts. Recombinant RH39 binds to the 23S rRNA in a segment adjacent to the stem-loop creating the hidden break target loop in a sequence-dependent manner. Has ATP-hydrolyzing activity at a Kcat of 5.3 /min in the presence of rRNA sequence. Mutants have drastically reduced level of level of ribulose 1,5-bisphosphate carboxylase/oxygenase.; RH39 (RH39); FUNCTIONS IN: LSU rRNA binding, ATPase activity, ATP-dependent helicase activity; INVOLVED IN: chloroplast ribulose bisphosphate carboxylase complex biogenesis, chloroplast rRNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT3G06980.1); Has 40425 Blast hits to 39698 proteins in 3032 species: Archae - 675; Bacteria - 19989; Metazoa - 5933; Fungi - 4498; Plants - 2407; Viruses - 9; Other Eukaryotes - 6914 (source: NCBI BLink). & (reliability: 262.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2036.4","No alias","Porphyridium purpureum","(at5g13010 : 784.0) embryo defective 3011 (EMB3011); FUNCTIONS IN: RNA helicase activity, helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, putative (TAIR:AT3G26560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1568.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2051.4","No alias","Porphyridium purpureum","(at4g34910 : 262.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 35246 Blast hits to 34671 proteins in 2939 species: Archae - 524; Bacteria - 16250; Metazoa - 5646; Fungi - 4238; Plants - 2336; Viruses - 4; Other Eukaryotes - 6248 (source: NCBI BLink). & (p41380|if4a3_nicpl : 84.0) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 524.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2052.2","No alias","Porphyridium purpureum","(at1g31360 : 390.0) Encodes a (d)NTP-dependent 3'->5' DNA helicase. This protein can also disrupt D loop structures and may mediate branch migration of Holliday junctions when tested in vitro. The unwinding activity of the enzyme depends on the presence of divalent cations (Mg2+, Mn2+, or Ca2+, but not Zn2+).(d)NTPs are also required with ATP and dATP supporting the greatest amount of DNA unwinding in vitro.; RECQ helicase L2 (RECQL2); CONTAINS InterPro DOMAIN/s: RQC domain (InterPro:IPR018982), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Helicase/RNase D C-terminal, HRDC domain (InterPro:IPR002121); BEST Arabidopsis thaliana protein match is: DNA helicase (RECQl4A) (TAIR:AT1G10930.1); Has 27972 Blast hits to 27909 proteins in 2839 species: Archae - 320; Bacteria - 17784; Metazoa - 2771; Fungi - 1804; Plants - 1361; Viruses - 12; Other Eukaryotes - 3920 (source: NCBI BLink). & (reliability: 780.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2073.11","No alias","Porphyridium purpureum","(at1g48310 : 229.0) chromatin remodeling factor18 (CHR18); FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein (TAIR:AT5G07810.1); Has 16435 Blast hits to 14312 proteins in 1741 species: Archae - 101; Bacteria - 4551; Metazoa - 3441; Fungi - 3785; Plants - 1315; Viruses - 143; Other Eukaryotes - 3099 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 101.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 458.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2077.13","No alias","Porphyridium purpureum","(at2g13370 : 595.0) chromatin remodeling 5 (CHR5); FUNCTIONS IN: chromatin binding, helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: chromatin assembly or disassembly; LOCATED IN: chromatin, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), Homeodomain-like (InterPro:IPR009057), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor CHD3 (PICKLE) (TAIR:AT2G25170.1); Has 38529 Blast hits to 28045 proteins in 2467 species: Archae - 189; Bacteria - 9973; Metazoa - 8887; Fungi - 6205; Plants - 2508; Viruses - 447; Other Eukaryotes - 10320 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 419.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1190.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2106.3","No alias","Porphyridium purpureum","(at5g63630 : 366.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G08610.1); Has 41050 Blast hits to 40248 proteins in 2998 species: Archae - 715; Bacteria - 20319; Metazoa - 6002; Fungi - 4604; Plants - 2553; Viruses - 10; Other Eukaryotes - 6847 (source: NCBI BLink). & (p46942|db10_nicsy : 164.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 732.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2126.10","No alias","Porphyridium purpureum","(at1g12770 : 146.0) Encodes a DEAD-box RNA helicase that  localizes to mitochondria and is essential for regulating cell-to-cell transport via plasmodesmata.; embryo defective 1586 (EMB1586); FUNCTIONS IN: RNA helicase activity; INVOLVED IN: plasmodesma organization, plasmodesmata-mediated intercellular transport, embryo development ending in seed dormancy; LOCATED IN: mitochondrion; EXPRESSED IN: embryo, root, flower, shoot meristem; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 38833 Blast hits to 38121 proteins in 2993 species: Archae - 753; Bacteria - 18819; Metazoa - 5837; Fungi - 4441; Plants - 2445; Viruses - 12; Other Eukaryotes - 6526 (source: NCBI BLink). & (gnl|cdd|68872 : 99.7) no description available & (reliability: 292.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2126.16","No alias","Porphyridium purpureum","(at5g39840 : 308.0) ATP-dependent RNA helicase, mitochondrial, putative; FUNCTIONS IN: helicase activity, ATP-dependent RNA helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial degradasome RNA helicase subunit C-terminal (InterPro:IPR022192), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, mitochondrial (SUV3) (TAIR:AT4G14790.1); Has 4068 Blast hits to 4044 proteins in 754 species: Archae - 43; Bacteria - 1236; Metazoa - 267; Fungi - 388; Plants - 157; Viruses - 16; Other Eukaryotes - 1961 (source: NCBI BLink). & (reliability: 616.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2132.9","No alias","Porphyridium purpureum","(at3g06010 : 612.0) Encodes AtCHR12, a SNF2/Brahma-type chromatin-remodeling protein.  AtCHR12 mediates temporary growth arrest in Arabidopsis upon perceiving environmental stress.; ATCHR12; FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: response to water deprivation, response to salt stress, response to heat; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT5G19310.1); Has 23556 Blast hits to 19403 proteins in 2220 species: Archae - 141; Bacteria - 6122; Metazoa - 5759; Fungi - 4503; Plants - 1859; Viruses - 268; Other Eukaryotes - 4904 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 465.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1224.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2141.5","No alias","Porphyridium purpureum","(at3g53110 : 322.0) Encodes a putative DEAD-Box RNA Helicase and has RNA-dependent ATPase activity. Mutant is Sensitive to chilling stress and heat stress. Germination of the mutant is inhibited by ABA. LOS4 may be involved in temperature sensing. Is enriched in the nuclear envelope and also located in the cytoplasm. LOS4 is involved in export of poly A RNA.; LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 4 (LOS4); FUNCTIONS IN: RNA helicase activity, RNA-dependent ATPase activity, ATP-dependent helicase activity; INVOLVED IN: poly(A)+ mRNA export from nucleus, response to cold, response to heat, response to abscisic acid stimulus; LOCATED IN: nuclear envelope, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eukaryotic initiation factor 4A-III (TAIR:AT3G19760.1); Has 40925 Blast hits to 40635 proteins in 3033 species: Archae - 702; Bacteria - 21081; Metazoa - 5720; Fungi - 4311; Plants - 2419; Viruses - 28; Other Eukaryotes - 6664 (source: NCBI BLink). & (q41741|if4a_maize : 271.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Zea mays (Maize) & (gnl|cdd|68872 : 82.8) no description available & (reliability: 644.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2173.9","No alias","Porphyridium purpureum","(p41380|if4a3_nicpl : 348.0) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at3g19760 : 347.0) Encodes an RNA helicase that may be a component of the Exon Junction Complex. Subcellular localization is modulated by stress. Under normal conditions it is localized to the nuceloplasm but under hyopoxic conditions it localizes to the nucleolus and splicing speckles.; eukaryotic initiation factor 4A-III (EIF4A-III); FUNCTIONS IN: protein binding, ATP-dependent helicase activity; INVOLVED IN: mRNA processing, response to hypoxia; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G51380.1); Has 50040 Blast hits to 49280 proteins in 3163 species: Archae - 836; Bacteria - 27183; Metazoa - 6400; Fungi - 4843; Plants - 2693; Viruses - 42; Other Eukaryotes - 8043 (source: NCBI BLink). & (reliability: 694.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2180.3","No alias","Porphyridium purpureum","(at3g54460 : 302.0) SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein; FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, nucleic acid binding, ATP binding; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), SNF2-related (InterPro:IPR000330), F-box domain, Skp2-like (InterPro:IPR022364), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: DNA/RNA helicase protein (TAIR:AT5G22750.1); Has 15028 Blast hits to 11196 proteins in 1367 species: Archae - 59; Bacteria - 4030; Metazoa - 3400; Fungi - 4173; Plants - 1458; Viruses - 121; Other Eukaryotes - 1787 (source: NCBI BLink). & (reliability: 604.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2273.2","No alias","Porphyridium purpureum","(at1g27880 : 217.0) DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: DNA recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box RNA helicase family protein  (TAIR:AT4G35740.1); Has 41244 Blast hits to 39032 proteins in 2984 species: Archae - 762; Bacteria - 21282; Metazoa - 5401; Fungi - 4173; Plants - 3671; Viruses - 588; Other Eukaryotes - 5367 (source: NCBI BLink). & (reliability: 400.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2274.1","No alias","Porphyridium purpureum","(at1g12770 : 109.0) Encodes a DEAD-box RNA helicase that  localizes to mitochondria and is essential for regulating cell-to-cell transport via plasmodesmata.; embryo defective 1586 (EMB1586); FUNCTIONS IN: RNA helicase activity; INVOLVED IN: plasmodesma organization, plasmodesmata-mediated intercellular transport, embryo development ending in seed dormancy; LOCATED IN: mitochondrion; EXPRESSED IN: embryo, root, flower, shoot meristem; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 38833 Blast hits to 38121 proteins in 2993 species: Archae - 753; Bacteria - 18819; Metazoa - 5837; Fungi - 4441; Plants - 2445; Viruses - 12; Other Eukaryotes - 6526 (source: NCBI BLink). & (q41741|if4a_maize : 82.8) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Zea mays (Maize) & (reliability: 218.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2282.16","No alias","Porphyridium purpureum","(at1g10930 : 445.0) DNA helicase involved in the maintenance of genome stability by modulation of the DNA damage response and suppression of homologous recombination.; RECQ4A; FUNCTIONS IN: helicase activity, ATP-dependent 3'-5' DNA helicase activity, ATP-dependent helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: chromosome organization, response to DNA damage stimulus, double-strand break repair via homologous recombination; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RQC domain (InterPro:IPR018982), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Helicase/RNase D C-terminal, HRDC domain (InterPro:IPR002121); BEST Arabidopsis thaliana protein match is: RECQ helicase L4B (TAIR:AT1G60930.1); Has 34923 Blast hits to 34782 proteins in 2821 species: Archae - 633; Bacteria - 21324; Metazoa - 3687; Fungi - 2728; Plants - 1606; Viruses - 18; Other Eukaryotes - 4927 (source: NCBI BLink). & (reliability: 858.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2284.16","No alias","Porphyridium purpureum","(at1g59760 : 812.0) RNA helicase, ATP-dependent, SK12/DOB1 protein; FUNCTIONS IN: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DSH, C-terminal (InterPro:IPR012961), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), RNA helicase, ATP-dependent, SK12/DOB1 (InterPro:IPR016438), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase, ATP-dependent, SK12/DOB1 protein (TAIR:AT2G06990.1); Has 9909 Blast hits to 8438 proteins in 1290 species: Archae - 828; Bacteria - 3072; Metazoa - 1170; Fungi - 1231; Plants - 476; Viruses - 32; Other Eukaryotes - 3100 (source: NCBI BLink). & (reliability: 1624.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2292.8","No alias","Porphyridium purpureum","(at4g09730 : 239.0) Encodes RH39, a DEAD-box protein involved in the introduction of the hidden break into the 23S rRNA in the chloroplasts. Recombinant RH39 binds to the 23S rRNA in a segment adjacent to the stem-loop creating the hidden break target loop in a sequence-dependent manner. Has ATP-hydrolyzing activity at a Kcat of 5.3 /min in the presence of rRNA sequence. Mutants have drastically reduced level of level of ribulose 1,5-bisphosphate carboxylase/oxygenase.; RH39 (RH39); FUNCTIONS IN: LSU rRNA binding, ATPase activity, ATP-dependent helicase activity; INVOLVED IN: chloroplast ribulose bisphosphate carboxylase complex biogenesis, chloroplast rRNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT3G06980.1); Has 40425 Blast hits to 39698 proteins in 3032 species: Archae - 675; Bacteria - 19989; Metazoa - 5933; Fungi - 4498; Plants - 2407; Viruses - 9; Other Eukaryotes - 6914 (source: NCBI BLink). & (p46942|db10_nicsy : 138.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 478.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2305.9","No alias","Porphyridium purpureum","(at2g33730 : 296.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G28180.1); Has 125674 Blast hits to 72393 proteins in 3317 species: Archae - 1039; Bacteria - 55089; Metazoa - 31149; Fungi - 11223; Plants - 5926; Viruses - 327; Other Eukaryotes - 20921 (source: NCBI BLink). & (p46942|db10_nicsy : 209.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 592.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2314.2","No alias","Porphyridium purpureum","(at1g20920 : 597.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G09620.1); Has 45185 Blast hits to 44279 proteins in 3076 species: Archae - 794; Bacteria - 22443; Metazoa - 6674; Fungi - 4936; Plants - 2699; Viruses - 11; Other Eukaryotes - 7628 (source: NCBI BLink). & (p46942|db10_nicsy : 292.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1194.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2494.11","No alias","Porphyridium purpureum","(at3g62310 : 436.0) RNA helicase family protein; FUNCTIONS IN: RNA helicase activity, helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase family protein (TAIR:AT2G47250.1); Has 10517 Blast hits to 9531 proteins in 1639 species: Archae - 4; Bacteria - 3473; Metazoa - 2472; Fungi - 1291; Plants - 883; Viruses - 640; Other Eukaryotes - 1754 (source: NCBI BLink). & (reliability: 872.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2502.9","No alias","Porphyridium purpureum","(at1g55150 : 425.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 46818 Blast hits to 45969 proteins in 3127 species: Archae - 940; Bacteria - 23848; Metazoa - 6439; Fungi - 4774; Plants - 2718; Viruses - 21; Other Eukaryotes - 8078 (source: NCBI BLink). & (p46942|db10_nicsy : 338.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|68872 : 83.6) no description available & (reliability: 850.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2513.1","No alias","Porphyridium purpureum","(at3g05740 : 231.0) RECQ helicase l1 (RECQI1); FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: DNA recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DNA helicase (RECQl4A) (TAIR:AT1G10930.1); Has 22913 Blast hits to 22836 proteins in 2673 species: Archae - 358; Bacteria - 13443; Metazoa - 2936; Fungi - 2132; Plants - 1261; Viruses - 9; Other Eukaryotes - 2774 (source: NCBI BLink). & (reliability: 460.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_2672.1","No alias","Porphyridium purpureum","(at2g25170 : 447.0) Encodes a SWI/SWF nuclear-localized chromatin remodeling factor of the CHD3 group. Involved in post-germination repression of embryonic development. Acts with GA to establish repression of embryonic genes upon germination. Protein preferentially accumulates in differentiating tissues. Loss of function alleles are associated with expression of embryonic traits in adult plants and derepression of embryonic genes such as PHEROS1.  Is an extragenic suppressor of slr2 (SSL2).  Mutations in PKL (SSL2) restores lateral root formation in the slr2 mutant slr-1.  It was proposed that PKL/SSL2-mediated chromatin remodeling negatively regulates auxin-mediated LR formation in Arabidopsis.; PICKLE (PKL); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1087 (InterPro:IPR009463), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Protein of unknown function DUF1086 (InterPro:IPR009462), Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor, putative (TAIR:AT4G31900.1); Has 20234 Blast hits to 17178 proteins in 1958 species: Archae - 161; Bacteria - 5176; Metazoa - 5098; Fungi - 4334; Plants - 1876; Viruses - 134; Other Eukaryotes - 3455 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 397.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 892.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3385.6","No alias","Porphyridium purpureum","(at5g26742 : 365.0) embryo defective 1138 (emb1138); FUNCTIONS IN: in 6 functions; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), GUCT (InterPro:IPR012562), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, CCHC-type (InterPro:IPR001878), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: putative mitochondrial RNA helicase 2 (TAIR:AT3G22330.1). & (q41382|rh7_spiol : 331.0) DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) & (gnl|cdd|68872 : 168.0) no description available & (gnl|cdd|39774 : 80.5) no description available & (reliability: 730.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3387.5","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3389.2","No alias","Porphyridium purpureum","(at1g16280 : 204.0) RNA helicase 36 (RH36); FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; INVOLVED IN: post-embryonic development, embryo sac development, rRNA processing; LOCATED IN: nucleus; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 43946 Blast hits to 42938 proteins in 3095 species: Archae - 969; Bacteria - 21832; Metazoa - 6240; Fungi - 4948; Plants - 2606; Viruses - 36; Other Eukaryotes - 7315 (source: NCBI BLink). & (p46942|db10_nicsy : 113.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|68872 : 89.3) no description available & (reliability: 408.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3392.5","No alias","Porphyridium purpureum","(at1g26370 : 321.0) RNA helicase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), ATPase, AAA+ type, core (InterPro:IPR003593), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, putative (TAIR:AT3G26560.1); Has 9899 Blast hits to 9180 proteins in 1561 species: Archae - 2; Bacteria - 3369; Metazoa - 2309; Fungi - 1230; Plants - 848; Viruses - 465; Other Eukaryotes - 1676 (source: NCBI BLink). & (reliability: 626.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3414.2","No alias","Porphyridium purpureum","(at3g03300 : 120.0) Encodes a Dicer-like protein that functions in the antiviral silencing response in turnip-crinkle virus-infected plants but not in TMV or CMV-strain-Y-infected plants.  Involved in the production of ta-siRNAs. Partially antagonizes the production of miRNAs by DCL1. Substitutes for DCL4 to produce viral siRNA when DCL4 is missing or inhibited. Able to produce siRNAs but not miRNAs.; dicer-like 2 (DCL2); FUNCTIONS IN: in 7 functions; INVOLVED IN: defense response to virus, maintenance of DNA methylation, production of ta-siRNAs involved in RNA interference; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Double-stranded RNA-binding (InterPro:IPR001159), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Ribonuclease III (InterPro:IPR000999), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Dicer double-stranded RNA-binding fold (InterPro:IPR005034), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: dicer-like 4 (TAIR:AT5G20320.1). & (reliability: 240.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3419.8","No alias","Porphyridium purpureum","(at2g35920 : 336.0) RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G04895.1); Has 15667 Blast hits to 10761 proteins in 1709 species: Archae - 0; Bacteria - 5024; Metazoa - 4470; Fungi - 1848; Plants - 1329; Viruses - 777; Other Eukaryotes - 2219 (source: NCBI BLink). & (reliability: 672.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3421.3","No alias","Porphyridium purpureum","(at4g35740 : 295.0) Encodes RECQ3, an ATP-dependent helicase.; RecQl3; FUNCTIONS IN: ATP binding, ATP-dependent helicase activity; INVOLVED IN: DNA recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RECQ helicase L2 (TAIR:AT1G31360.1); Has 28158 Blast hits to 28089 proteins in 2765 species: Archae - 286; Bacteria - 16813; Metazoa - 3341; Fungi - 2669; Plants - 1491; Viruses - 10; Other Eukaryotes - 3548 (source: NCBI BLink). & (reliability: 590.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3423.21","No alias","Porphyridium purpureum","(at1g05120 : 643.0) Helicase protein with RING/U-box domain; FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G02670.1); Has 29218 Blast hits to 14448 proteins in 1607 species: Archae - 124; Bacteria - 8622; Metazoa - 6656; Fungi - 6694; Plants - 2674; Viruses - 189; Other Eukaryotes - 4259 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 88.6) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1286.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3435.13","No alias","Porphyridium purpureum","(at1g77030 : 345.0) hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides;ATP-dependent helicases;nucleic acid binding;ATP binding;RNA binding;helicases; FUNCTIONS IN: in 6 functions; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DBP10CT (InterPro:IPR012541), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 42888 Blast hits to 42073 proteins in 3063 species: Archae - 831; Bacteria - 21864; Metazoa - 5973; Fungi - 4375; Plants - 2654; Viruses - 31; Other Eukaryotes - 7160 (source: NCBI BLink). & (p46942|db10_nicsy : 155.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 690.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3441.14","No alias","Porphyridium purpureum","(at2g35920 : 595.0) RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G04895.1); Has 15667 Blast hits to 10761 proteins in 1709 species: Archae - 0; Bacteria - 5024; Metazoa - 4470; Fungi - 1848; Plants - 1329; Viruses - 777; Other Eukaryotes - 2219 (source: NCBI BLink). & (reliability: 1190.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3445.4","No alias","Porphyridium purpureum","(at3g02060 : 432.0) DEAD/DEAH box helicase, putative; FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA repair, regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription-repair-coupling factor (InterPro:IPR005118), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Transcription factor CarD (InterPro:IPR003711), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box RNA helicase family protein  (TAIR:AT2G01440.1); Has 31156 Blast hits to 30938 proteins in 2896 species: Archae - 262; Bacteria - 19852; Metazoa - 1548; Fungi - 988; Plants - 649; Viruses - 13; Other Eukaryotes - 7844 (source: NCBI BLink). & (reliability: 864.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3450.27","No alias","Porphyridium purpureum","(at4g00660 : 615.0) RNAhelicase-like 8 (RH8); FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: viral reproduction, virus-host interaction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G45810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p41379|if4a2_nicpl : 268.0) Eukaryotic initiation factor 4A-2 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-2) (eIF-4A-2) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 1230.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3450.5","No alias","Porphyridium purpureum","(q41382|rh7_spiol : 422.0) DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) & (at5g62190 : 392.0) DEAD/DEAH box RNA helicase PRH75; PRH75; FUNCTIONS IN: DEAD/H-box RNA helicase binding, ATP-dependent helicase activity; INVOLVED IN: RNA metabolic process; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), GUCT (InterPro:IPR012562), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase (RH3) (TAIR:AT5G26742.2); Has 57587 Blast hits to 49572 proteins in 3210 species: Archae - 795; Bacteria - 24538; Metazoa - 10953; Fungi - 6002; Plants - 4052; Viruses - 90; Other Eukaryotes - 11157 (source: NCBI BLink). & (reliability: 784.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3451.10","No alias","Porphyridium purpureum","(at3g18600 : 515.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G65900.1); Has 44310 Blast hits to 43105 proteins in 3082 species: Archae - 753; Bacteria - 22440; Metazoa - 6214; Fungi - 4682; Plants - 2500; Viruses - 12; Other Eukaryotes - 7709 (source: NCBI BLink). & (p46942|db10_nicsy : 185.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1030.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3491.5","No alias","Porphyridium purpureum","(at5g05450 : 337.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G71370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p46942|db10_nicsy : 164.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 640.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3495.6","No alias","Porphyridium purpureum","(at3g22330 : 130.0) DEAD-box protein required for efficient group II  intron splicing in mitochondria.; putative mitochondrial RNA helicase 2 (PMH2); FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; INVOLVED IN: response to cold, Group II intron splicing; LOCATED IN: mitochondrion, nucleolus, cell wall, protein complex; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase (RH3) (TAIR:AT5G26742.2); Has 113280 Blast hits to 72794 proteins in 3598 species: Archae - 1390; Bacteria - 52148; Metazoa - 22767; Fungi - 9352; Plants - 8202; Viruses - 661; Other Eukaryotes - 18760 (source: NCBI BLink). & (p46942|db10_nicsy : 122.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|68872 : 107.0) no description available & (reliability: 260.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3507.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_3509.14","No alias","Porphyridium purpureum","(at3g58510 : 507.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; LOCATED IN: nucleolus, peroxisome, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G42520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p46942|db10_nicsy : 302.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1014.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3592.2","No alias","Porphyridium purpureum","(at5g11170 : 402.0) DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; INVOLVED IN: response to cadmium ion; LOCATED IN: nucleolus; EXPRESSED IN: guard cell, root, cultured cell; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box RNA helicase family protein  (TAIR:AT5G11200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q40471|if4a9_tobac : 218.0) Eukaryotic initiation factor 4A-9 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-9) (eIF-4A-9) - Nicotiana tabacum (Common tobacco) & (reliability: 804.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_3605.3","No alias","Porphyridium purpureum","(at5g60990 : 427.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase 36 (TAIR:AT1G16280.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p46942|db10_nicsy : 205.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 854.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4410.20","No alias","Porphyridium purpureum","(at1g59990 : 118.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G40700.1); Has 57869 Blast hits to 34290 proteins in 2955 species: Archae - 517; Bacteria - 30307; Metazoa - 8550; Fungi - 6961; Plants - 3872; Viruses - 6; Other Eukaryotes - 7656 (source: NCBI BLink). & (gnl|cdd|68872 : 105.0) no description available & (reliability: 236.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4416.8","No alias","Porphyridium purpureum","(at2g32000 : 337.0) DNA topoisomerase, type IA, core; FUNCTIONS IN: DNA topoisomerase activity, DNA topoisomerase type I activity, DNA binding, nucleic acid binding; INVOLVED IN: DNA topological change, DNA unwinding involved in replication, DNA metabolic process; LOCATED IN: endomembrane system, chromosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Toprim domain, subgroup (InterPro:IPR006154), DNA topoisomerase, type IA, central region, subdomain 1 (InterPro:IPR013824), DNA topoisomerase, type IA, core (InterPro:IPR000380), Toprim domain (InterPro:IPR006171), DNA topoisomerase, type IA, DNA-binding (InterPro:IPR003602), DNA topoisomerase, type IA, domain 2 (InterPro:IPR003601), DNA topoisomerase, type IA, central (InterPro:IPR013497), DNA topoisomerase, type IA, central region, subdomain 3 (InterPro:IPR013826); BEST Arabidopsis thaliana protein match is: topoisomerase 3alpha (TAIR:AT5G63920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p46942|db10_nicsy : 193.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 674.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4438.19","No alias","Porphyridium purpureum","(at3g06010 : 317.0) Encodes AtCHR12, a SNF2/Brahma-type chromatin-remodeling protein.  AtCHR12 mediates temporary growth arrest in Arabidopsis upon perceiving environmental stress.; ATCHR12; FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: response to water deprivation, response to salt stress, response to heat; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT5G19310.1); Has 23556 Blast hits to 19403 proteins in 2220 species: Archae - 141; Bacteria - 6122; Metazoa - 5759; Fungi - 4503; Plants - 1859; Viruses - 268; Other Eukaryotes - 4904 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 276.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 634.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_447.4","No alias","Porphyridium purpureum","(at1g31970 : 367.0) STRESS RESPONSE SUPPRESSOR 1 (STRS1); FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 53114 Blast hits to 49629 proteins in 3238 species: Archae - 911; Bacteria - 25415; Metazoa - 8113; Fungi - 5284; Plants - 3075; Viruses - 103; Other Eukaryotes - 10213 (source: NCBI BLink). & (p46942|db10_nicsy : 282.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (gnl|cdd|68872 : 130.0) no description available & (gnl|cdd|39774 : 83.2) no description available & (reliability: 734.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4474.1","No alias","Porphyridium purpureum","(at3g12810 : 667.0) Encodes a protein similar to ATP-dependent, chromatin-remodeling proteins of the ISWI and SWI2/SNF2 family. Genetic analyses suggest that this gene is involved in multiple flowering pathways. Mutations in PIE1 results in suppression of FLC-mediated delay of flowering and causes early flowering in noninductive photoperiods independently of FLC. PIE1 is required for expression of FLC in the shoot apex but not in the root.Along with ARP6 forms a complex to deposit modified histone H2A.Z at several loci within the genome. This modification alters the expression of the target genes (i.e. FLC, MAF4, MAF6).; PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 (PIE1); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; INVOLVED IN: in 6 processes; LOCATED IN: SWI/SNF complex, cell wall, chromatin remodeling complex; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: HSA (InterPro:IPR006562), HAS subgroup (InterPro:IPR013999), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), SNF2-related (InterPro:IPR000330), MYB-like (InterPro:IPR017877), SANT, DNA-binding (InterPro:IPR001005), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: INO80 ortholog (TAIR:AT3G57300.1); Has 42311 Blast hits to 26312 proteins in 2357 species: Archae - 246; Bacteria - 10217; Metazoa - 11172; Fungi - 7336; Plants - 2916; Viruses - 500; Other Eukaryotes - 9924 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 232.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|68872 : 95.9) no description available & (reliability: 1334.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4476.3","No alias","Porphyridium purpureum","(at1g03750 : 287.0) switch 2 (SWI2); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: homolog of RAD54 (TAIR:AT3G19210.1); Has 20033 Blast hits to 14398 proteins in 1655 species: Archae - 120; Bacteria - 5954; Metazoa - 4199; Fungi - 4321; Plants - 1927; Viruses - 177; Other Eukaryotes - 3335 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 132.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 574.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_448.10","No alias","Porphyridium purpureum","(at1g70070 : 362.0) Allelic to ISE2(increased size  exclusion limit of plasmodesmata 2).  Mutants maintain dilated plasmodesmata at the embryonic torpedo stage.; EMBRYO DEFECTIVE 25 (EMB25); FUNCTIONS IN: RNA helicase activity, ATP-dependent helicase activity; INVOLVED IN: posttranscriptional gene silencing, plasmodesmata-mediated intercellular transport, embryo development ending in seed dormancy; LOCATED IN: stress granule, chloroplast stroma, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DSH, C-terminal (InterPro:IPR012961), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase, ATP-dependent, SK12/DOB1 protein (TAIR:AT3G46960.1); Has 21396 Blast hits to 12786 proteins in 1473 species: Archae - 1027; Bacteria - 4600; Metazoa - 5457; Fungi - 2724; Plants - 1158; Viruses - 307; Other Eukaryotes - 6123 (source: NCBI BLink). & (reliability: 724.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4482.5","No alias","Porphyridium purpureum","(at3g09720 : 178.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, nucleic acid binding, ATP binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 47831 Blast hits to 47082 proteins in 3124 species: Archae - 967; Bacteria - 25249; Metazoa - 6167; Fungi - 4801; Plants - 2681; Viruses - 34; Other Eukaryotes - 7932 (source: NCBI BLink). & (p46942|db10_nicsy : 119.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 356.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4483.9","No alias","Porphyridium purpureum","(at2g40770 : 437.0) zinc ion binding;DNA binding;helicases;ATP binding;nucleic acid binding; FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, nucleic acid binding, ATP binding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), SNF2-related (InterPro:IPR000330), DEAD-like helicase, N-terminal (InterPro:IPR014001), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related (TAIR:AT1G61140.1); Has 20880 Blast hits to 12947 proteins in 1504 species: Archae - 88; Bacteria - 5732; Metazoa - 4955; Fungi - 5171; Plants - 2134; Viruses - 115; Other Eukaryotes - 2685 (source: NCBI BLink). & (reliability: 874.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_450.3","No alias","Porphyridium purpureum","(at3g62310 : 264.0) RNA helicase family protein; FUNCTIONS IN: RNA helicase activity, helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase family protein (TAIR:AT2G47250.1); Has 10517 Blast hits to 9531 proteins in 1639 species: Archae - 4; Bacteria - 3473; Metazoa - 2472; Fungi - 1291; Plants - 883; Viruses - 640; Other Eukaryotes - 1754 (source: NCBI BLink). & (gnl|cdd|68872 : 106.0) no description available & (reliability: 520.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4515.2","No alias","Porphyridium purpureum","(at4g33370 : 389.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, zinc ion binding, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), Zinc finger, CCHC-type (InterPro:IPR001878), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD-box protein abstrakt, putative (TAIR:AT5G51280.1); Has 45034 Blast hits to 44312 proteins in 3130 species: Archae - 817; Bacteria - 23057; Metazoa - 6215; Fungi - 4847; Plants - 2647; Viruses - 8; Other Eukaryotes - 7443 (source: NCBI BLink). & (p46942|db10_nicsy : 196.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 778.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_452.16","No alias","Porphyridium purpureum","(at3g19210 : 335.0) Encodes RAD54, a member of the SWI2/SNF2 family of DNA-stimulated ATPases.  Functions in DNA repair via homologous recombination.; homolog of RAD54 (RAD54); FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: DNA repair, response to gamma radiation, double-strand break repair via homologous recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: style (sensu Poaceae), hydathode, root, petiole; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: switch 2 (TAIR:AT1G03750.1). & (q7g8y3|isw2_orysa : 184.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 670.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4527.1","No alias","Porphyridium purpureum","(at3g06010 : 582.0) Encodes AtCHR12, a SNF2/Brahma-type chromatin-remodeling protein.  AtCHR12 mediates temporary growth arrest in Arabidopsis upon perceiving environmental stress.; ATCHR12; FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: response to water deprivation, response to salt stress, response to heat; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT5G19310.1); Has 23556 Blast hits to 19403 proteins in 2220 species: Archae - 141; Bacteria - 6122; Metazoa - 5759; Fungi - 4503; Plants - 1859; Viruses - 268; Other Eukaryotes - 4904 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 442.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|68872 : 96.6) no description available & (reliability: 1164.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4530.1","No alias","Porphyridium purpureum","(at5g54910 : 357.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G65900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p46942|db10_nicsy : 156.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 714.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_454.9","No alias","Porphyridium purpureum","(p35683|if4a_orysa : 541.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Oryza sativa (Rice) & (at3g13920 : 540.0) eukaryotic translation initiation factor 4A-1; eukaryotic translation initiation factor 4A1 (EIF4A1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eif4a-2 (TAIR:AT1G54270.2). & (reliability: 1004.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_462.10","No alias","Porphyridium purpureum","(at1g35530 : 221.0) DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: in 6 functions; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G36020.1). & (reliability: 442.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_468.12","No alias","Porphyridium purpureum","(at5g26742 : 306.0) embryo defective 1138 (emb1138); FUNCTIONS IN: in 6 functions; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), GUCT (InterPro:IPR012562), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, CCHC-type (InterPro:IPR001878), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: putative mitochondrial RNA helicase 2 (TAIR:AT3G22330.1). & (q41382|rh7_spiol : 305.0) DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) & (reliability: 612.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_483.3","No alias","Porphyridium purpureum","(at5g18620 : 838.0) chromatin remodeling factor17 (CHR17); FUNCTIONS IN: in 7 functions; INVOLVED IN: ATP-dependent chromatin remodeling, chromatin remodeling; LOCATED IN: nucleus, chromatin remodeling complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, nucleosome remodelling ISWI, HAND domain (InterPro:IPR015194), SANT, eukarya (InterPro:IPR017884), SNF2-related (InterPro:IPR000330), SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), SLIDE (InterPro:IPR015195), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: chromatin-remodeling protein 11 (TAIR:AT3G06400.2); Has 25193 Blast hits to 20371 proteins in 2196 species: Archae - 142; Bacteria - 5974; Metazoa - 6066; Fungi - 4943; Plants - 1903; Viruses - 481; Other Eukaryotes - 5684 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 820.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1664.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_497.6","No alias","Porphyridium purpureum","(at3g02060 : 382.0) DEAD/DEAH box helicase, putative; FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA repair, regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription-repair-coupling factor (InterPro:IPR005118), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Transcription factor CarD (InterPro:IPR003711), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box RNA helicase family protein  (TAIR:AT2G01440.1); Has 31156 Blast hits to 30938 proteins in 2896 species: Archae - 262; Bacteria - 19852; Metazoa - 1548; Fungi - 988; Plants - 649; Viruses - 13; Other Eukaryotes - 7844 (source: NCBI BLink). & (reliability: 764.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_504.6","No alias","Porphyridium purpureum","(q41382|rh7_spiol : 210.0) DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) & (at3g22310 : 205.0) Sequence similarity ot DEAD-box RNA helicases. Binds RNA and DNA. Involved in drought, salt and cold stress responses.; putative mitochondrial RNA helicase 1 (PMH1); CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: putative mitochondrial RNA helicase 2 (TAIR:AT3G22330.1); Has 154573 Blast hits to 81509 proteins in 3841 species: Archae - 1406; Bacteria - 64973; Metazoa - 34940; Fungi - 12014; Plants - 11424; Viruses - 1269; Other Eukaryotes - 28547 (source: NCBI BLink). & (reliability: 372.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_522.12","No alias","Porphyridium purpureum","(at1g12770 : 209.0) Encodes a DEAD-box RNA helicase that  localizes to mitochondria and is essential for regulating cell-to-cell transport via plasmodesmata.; embryo defective 1586 (EMB1586); FUNCTIONS IN: RNA helicase activity; INVOLVED IN: plasmodesma organization, plasmodesmata-mediated intercellular transport, embryo development ending in seed dormancy; LOCATED IN: mitochondrion; EXPRESSED IN: embryo, root, flower, shoot meristem; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 38833 Blast hits to 38121 proteins in 2993 species: Archae - 753; Bacteria - 18819; Metazoa - 5837; Fungi - 4441; Plants - 2445; Viruses - 12; Other Eukaryotes - 6526 (source: NCBI BLink). & (q41382|rh7_spiol : 131.0) DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) & (reliability: 418.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_524.2","No alias","Porphyridium purpureum","(at3g62310 : 724.0) RNA helicase family protein; FUNCTIONS IN: RNA helicase activity, helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase family protein (TAIR:AT2G47250.1); Has 10517 Blast hits to 9531 proteins in 1639 species: Archae - 4; Bacteria - 3473; Metazoa - 2472; Fungi - 1291; Plants - 883; Viruses - 640; Other Eukaryotes - 1754 (source: NCBI BLink). & (reliability: 1448.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_524.6","No alias","Porphyridium purpureum","(at5g22750 : 317.0) DNA repair gene. gamma-radiation hypersensitive (RAD5) involved in stable transformation and T-DNA transfer; RAD5; FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA mediated transformation; EXPRESSED IN: embryo, sperm cell, seed; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), HIP116, Rad5p N-terminal (InterPro:IPR014905), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Helicase protein with RING/U-box domain (TAIR:AT5G43530.1); Has 27107 Blast hits to 18179 proteins in 1771 species: Archae - 108; Bacteria - 7266; Metazoa - 8140; Fungi - 5089; Plants - 2446; Viruses - 173; Other Eukaryotes - 3885 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 119.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 634.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_531.19","No alias","Porphyridium purpureum","(at4g15850 : 135.0) plant DEAD box-like RNA helicase.; RNA helicase 1 (RH1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT4G16630.1); Has 38711 Blast hits to 38056 proteins in 2969 species: Archae - 603; Bacteria - 19125; Metazoa - 5736; Fungi - 4393; Plants - 2535; Viruses - 13; Other Eukaryotes - 6306 (source: NCBI BLink). & (q41382|rh7_spiol : 84.0) DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) & (reliability: 270.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_552.6","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding"
"evm.model.contig_564.1","No alias","Porphyridium purpureum","(at1g20960 : 540.0) embryo defective 1507 (emb1507); FUNCTIONS IN: in 6 functions; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Sec63 domain (InterPro:IPR004179), Sec63 domain, subgroup (InterPro:IPR018127), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase (TAIR:AT2G42270.1). & (reliability: 1080.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_594.3","No alias","Porphyridium purpureum","(at1g32490 : 556.0) Encodes a homolog of the yeast PRP2 protein, one of four related DEAH RNA helicases identified as essential cofactors for RNA splicing.; ENHANCED SILENCING PHENOTYPE 3 (ESP3); FUNCTIONS IN: helicase activity, ATP-dependent RNA helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; INVOLVED IN: RNA splicing, posttranscriptional gene silencing by RNA, embryo development ending in seed dormancy; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: helicase domain-containing protein (TAIR:AT2G35340.1). & (reliability: 1112.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_601.5","No alias","Porphyridium purpureum","(at4g16630 : 453.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 91788 Blast hits to 67613 proteins in 3461 species: Archae - 858; Bacteria - 34733; Metazoa - 21444; Fungi - 9002; Plants - 4280; Viruses - 615; Other Eukaryotes - 20856 (source: NCBI BLink). & (p46942|db10_nicsy : 166.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 906.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_618.2","No alias","Porphyridium purpureum","(at3g26560 : 1023.0) ATP-dependent RNA helicase, putative; FUNCTIONS IN: in 6 functions; LOCATED IN: cytosol, mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Domain of unknown function DUF1605 (InterPro:IPR011709), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase family protein (TAIR:AT1G32490.2); Has 53052 Blast hits to 35825 proteins in 3176 species: Archae - 195; Bacteria - 13845; Metazoa - 17201; Fungi - 5520; Plants - 3365; Viruses - 1203; Other Eukaryotes - 11723 (source: NCBI BLink). & (reliability: 2046.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_640.1","No alias","Porphyridium purpureum","(at3g54280 : 588.0) ROOT GROWTH DEFECTIVE 3 (RGD3); FUNCTIONS IN: helicase activity, binding, DNA binding, nucleic acid binding, ATP binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), DEAD-like helicase, N-terminal (InterPro:IPR014001), Armadillo-type fold (InterPro:IPR016024), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT3G06010.1). & (q7g8y3|isw2_orysa : 219.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1176.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_664.3","No alias","Porphyridium purpureum","(at3g57300 : 386.0) Encodes the Arabidopsis INO80 ortholog of the SWI/SNF ATPase family.  Functions as a positive regulator of DNA homologous recombination (HR).  In INO80 mutants, the HR frequency is reduced to 15% of that in the wild-type.  Mutation in INO80 does not affect sensitivity to genotoxic agents and efficiency of T-DNA integration.  INO80 was also shown to regulate a subset of the Arabidopsis transcriptome.; INO80 ortholog (INO80); FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: somatic cell DNA recombination, positive regulation of DNA repair, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA binding domain, INO80 (InterPro:IPR020838), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein (TAIR:AT3G12810.1). & (q7g8y3|isw2_orysa : 258.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 772.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_673.1","No alias","Porphyridium purpureum","(at2g35920 : 350.0) RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G04895.1); Has 15667 Blast hits to 10761 proteins in 1709 species: Archae - 0; Bacteria - 5024; Metazoa - 4470; Fungi - 1848; Plants - 1329; Viruses - 777; Other Eukaryotes - 2219 (source: NCBI BLink). & (reliability: 700.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_686.2","No alias","Porphyridium purpureum","(at2g18760 : 322.0) chromatin remodeling 8 (CHR8); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; INVOLVED IN: DNA repair, response to gamma radiation; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling 24 (TAIR:AT5G63950.1); Has 17230 Blast hits to 14463 proteins in 1653 species: Archae - 99; Bacteria - 4180; Metazoa - 3846; Fungi - 4219; Plants - 1677; Viruses - 118; Other Eukaryotes - 3091 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 226.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 644.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000076.123","No alias","Cyanophora paradoxa","(at5g39840 : 286.0) ATP-dependent RNA helicase, mitochondrial, putative; FUNCTIONS IN: helicase activity, ATP-dependent RNA helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial degradasome RNA helicase subunit C-terminal (InterPro:IPR022192), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, mitochondrial (SUV3) (TAIR:AT4G14790.1); Has 4068 Blast hits to 4044 proteins in 754 species: Archae - 43; Bacteria - 1236; Metazoa - 267; Fungi - 388; Plants - 157; Viruses - 16; Other Eukaryotes - 1961 (source: NCBI BLink). & (reliability: 532.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000093.151","No alias","Cyanophora paradoxa","(at5g26742 : 291.0) embryo defective 1138 (emb1138); FUNCTIONS IN: in 6 functions; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), GUCT (InterPro:IPR012562), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, CCHC-type (InterPro:IPR001878), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: putative mitochondrial RNA helicase 2 (TAIR:AT3G22330.1). & (q41382|rh7_spiol : 263.0) DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) & (reliability: 582.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000128.11","No alias","Cyanophora paradoxa","(at5g18620 : 692.0) chromatin remodeling factor17 (CHR17); FUNCTIONS IN: in 7 functions; INVOLVED IN: ATP-dependent chromatin remodeling, chromatin remodeling; LOCATED IN: nucleus, chromatin remodeling complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, nucleosome remodelling ISWI, HAND domain (InterPro:IPR015194), SANT, eukarya (InterPro:IPR017884), SNF2-related (InterPro:IPR000330), SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), SLIDE (InterPro:IPR015195), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: chromatin-remodeling protein 11 (TAIR:AT3G06400.2); Has 25193 Blast hits to 20371 proteins in 2196 species: Archae - 142; Bacteria - 5974; Metazoa - 6066; Fungi - 4943; Plants - 1903; Viruses - 481; Other Eukaryotes - 5684 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 684.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1384.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000144.188","No alias","Cyanophora paradoxa","(at5g66750 : 92.4) Protein is similar to SWI2/SNF2 chromatin remodeling proteins. DDM1 is appears to act as a chromatin-remodeling ATPase involved in cytosine methylation in CG and non-CG contexts. Involved in gene silencing and maintenance of DNA methylation and histone methylation. Hypomethylation of many genomic regions occurs in ddm1 mutants, and can cause several phenotypic abnormalities, but some loci, such as BONSAI (At1g73177) can be hypermethylated in ddm1 mutants after several generations, leading to different phenotypes. DDM1 might be involved in establishing a heterochromain boundary. A line expressing an RNAi targeted against DDM1  shows some resistance to agrobacterium-mediated root transformation.; chromatin remodeling 1 (CHR1); FUNCTIONS IN: helicase activity, ATPase activity; INVOLVED IN: methylation-dependent chromatin silencing, DNA mediated transformation, transposition, RNA-mediated; LOCATED IN: nucleosome; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor17 (TAIR:AT5G18620.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 80.9) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 184.8) &  (original description: no original description)","protein_coding"
"evm.model.tig00000194.25","No alias","Cyanophora paradoxa","(at3g12810 : 432.0) Encodes a protein similar to ATP-dependent, chromatin-remodeling proteins of the ISWI and SWI2/SNF2 family. Genetic analyses suggest that this gene is involved in multiple flowering pathways. Mutations in PIE1 results in suppression of FLC-mediated delay of flowering and causes early flowering in noninductive photoperiods independently of FLC. PIE1 is required for expression of FLC in the shoot apex but not in the root.Along with ARP6 forms a complex to deposit modified histone H2A.Z at several loci within the genome. This modification alters the expression of the target genes (i.e. FLC, MAF4, MAF6).; PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 (PIE1); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; INVOLVED IN: in 6 processes; LOCATED IN: SWI/SNF complex, cell wall, chromatin remodeling complex; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: HSA (InterPro:IPR006562), HAS subgroup (InterPro:IPR013999), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), SNF2-related (InterPro:IPR000330), MYB-like (InterPro:IPR017877), SANT, DNA-binding (InterPro:IPR001005), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: INO80 ortholog (TAIR:AT3G57300.1); Has 42311 Blast hits to 26312 proteins in 2357 species: Archae - 246; Bacteria - 10217; Metazoa - 11172; Fungi - 7336; Plants - 2916; Viruses - 500; Other Eukaryotes - 9924 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 149.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 864.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000203.32","No alias","Cyanophora paradoxa","(at3g53110 : 332.0) Encodes a putative DEAD-Box RNA Helicase and has RNA-dependent ATPase activity. Mutant is Sensitive to chilling stress and heat stress. Germination of the mutant is inhibited by ABA. LOS4 may be involved in temperature sensing. Is enriched in the nuclear envelope and also located in the cytoplasm. LOS4 is involved in export of poly A RNA.; LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 4 (LOS4); FUNCTIONS IN: RNA helicase activity, RNA-dependent ATPase activity, ATP-dependent helicase activity; INVOLVED IN: poly(A)+ mRNA export from nucleus, response to cold, response to heat, response to abscisic acid stimulus; LOCATED IN: nuclear envelope, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eukaryotic initiation factor 4A-III (TAIR:AT3G19760.1); Has 40925 Blast hits to 40635 proteins in 3033 species: Archae - 702; Bacteria - 21081; Metazoa - 5720; Fungi - 4311; Plants - 2419; Viruses - 28; Other Eukaryotes - 6664 (source: NCBI BLink). & (p41382|if410_tobac : 274.0) Eukaryotic initiation factor 4A-10 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-10) (eIF-4A-10) - Nicotiana tabacum (Common tobacco) & (reliability: 664.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000204.43","No alias","Cyanophora paradoxa","(at1g20920 : 534.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G09620.1); Has 45185 Blast hits to 44279 proteins in 3076 species: Archae - 794; Bacteria - 22443; Metazoa - 6674; Fungi - 4936; Plants - 2699; Viruses - 11; Other Eukaryotes - 7628 (source: NCBI BLink). & (p46942|db10_nicsy : 255.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1068.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000204.57","No alias","Cyanophora paradoxa","(at2g35920 : 187.0) RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G04895.1); Has 15667 Blast hits to 10761 proteins in 1709 species: Archae - 0; Bacteria - 5024; Metazoa - 4470; Fungi - 1848; Plants - 1329; Viruses - 777; Other Eukaryotes - 2219 (source: NCBI BLink). & (reliability: 374.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000215.35","No alias","Cyanophora paradoxa","(at2g35920 : 234.0) RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G04895.1); Has 15667 Blast hits to 10761 proteins in 1709 species: Archae - 0; Bacteria - 5024; Metazoa - 4470; Fungi - 1848; Plants - 1329; Viruses - 777; Other Eukaryotes - 2219 (source: NCBI BLink). & (reliability: 424.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000241.138","No alias","Cyanophora paradoxa","(at1g48310 : 122.0) chromatin remodeling factor18 (CHR18); FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein (TAIR:AT5G07810.1); Has 16435 Blast hits to 14312 proteins in 1741 species: Archae - 101; Bacteria - 4551; Metazoa - 3441; Fungi - 3785; Plants - 1315; Viruses - 143; Other Eukaryotes - 3099 (source: NCBI BLink). & (reliability: 244.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000254.101","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000339.25","No alias","Cyanophora paradoxa","(at1g08600 : 146.0) ATRX; FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: homolog of RAD54 (TAIR:AT3G19210.1). & (q7g8y3|isw2_orysa : 88.6) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 292.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000350.9","No alias","Cyanophora paradoxa","(at2g25170 : 212.0) Encodes a SWI/SWF nuclear-localized chromatin remodeling factor of the CHD3 group. Involved in post-germination repression of embryonic development. Acts with GA to establish repression of embryonic genes upon germination. Protein preferentially accumulates in differentiating tissues. Loss of function alleles are associated with expression of embryonic traits in adult plants and derepression of embryonic genes such as PHEROS1.  Is an extragenic suppressor of slr2 (SSL2).  Mutations in PKL (SSL2) restores lateral root formation in the slr2 mutant slr-1.  It was proposed that PKL/SSL2-mediated chromatin remodeling negatively regulates auxin-mediated LR formation in Arabidopsis.; PICKLE (PKL); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1087 (InterPro:IPR009463), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Protein of unknown function DUF1086 (InterPro:IPR009462), Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor, putative (TAIR:AT4G31900.1); Has 20234 Blast hits to 17178 proteins in 1958 species: Archae - 161; Bacteria - 5176; Metazoa - 5098; Fungi - 4334; Plants - 1876; Viruses - 134; Other Eukaryotes - 3455 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 183.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 414.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000378.31","No alias","Cyanophora paradoxa","(at5g22750 : 210.0) DNA repair gene. gamma-radiation hypersensitive (RAD5) involved in stable transformation and T-DNA transfer; RAD5; FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA mediated transformation; EXPRESSED IN: embryo, sperm cell, seed; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), HIP116, Rad5p N-terminal (InterPro:IPR014905), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Helicase protein with RING/U-box domain (TAIR:AT5G43530.1); Has 27107 Blast hits to 18179 proteins in 1771 species: Archae - 108; Bacteria - 7266; Metazoa - 8140; Fungi - 5089; Plants - 2446; Viruses - 173; Other Eukaryotes - 3885 (source: NCBI BLink). & (reliability: 420.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000441.11","No alias","Cyanophora paradoxa","(at3g18600 : 300.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G65900.1); Has 44310 Blast hits to 43105 proteins in 3082 species: Archae - 753; Bacteria - 22440; Metazoa - 6214; Fungi - 4682; Plants - 2500; Viruses - 12; Other Eukaryotes - 7709 (source: NCBI BLink). & (p41381|if4a8_tobac : 87.4) Eukaryotic initiation factor 4A-8 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-8) (eIF-4A-8) - Nicotiana tabacum (Common tobacco) & (reliability: 600.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000441.21","No alias","Cyanophora paradoxa","(at5g63950 : 284.0) chromatin remodeling 24 (CHR24); FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling 8 (TAIR:AT2G18760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 107.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 568.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000545.10","No alias","Cyanophora paradoxa","(at3g06010 : 472.0) Encodes AtCHR12, a SNF2/Brahma-type chromatin-remodeling protein.  AtCHR12 mediates temporary growth arrest in Arabidopsis upon perceiving environmental stress.; ATCHR12; FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: response to water deprivation, response to salt stress, response to heat; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT5G19310.1); Has 23556 Blast hits to 19403 proteins in 2220 species: Archae - 141; Bacteria - 6122; Metazoa - 5759; Fungi - 4503; Plants - 1859; Viruses - 268; Other Eukaryotes - 4904 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 377.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 944.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000552.21","No alias","Cyanophora paradoxa","(at2g01440 : 192.0) DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: ATP-dependent DNA helicase activity, helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: DNA repair, DNA recombination; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), DNA helicase, ATP-dependent, RecG (InterPro:IPR004609), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box helicase, putative (TAIR:AT3G02060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 384.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000605.2","No alias","Cyanophora paradoxa","(at3g19210 : 170.0) Encodes RAD54, a member of the SWI2/SNF2 family of DNA-stimulated ATPases.  Functions in DNA repair via homologous recombination.; homolog of RAD54 (RAD54); FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: DNA repair, response to gamma radiation, double-strand break repair via homologous recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: style (sensu Poaceae), hydathode, root, petiole; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: switch 2 (TAIR:AT1G03750.1). & (q7g8y3|isw2_orysa : 108.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 340.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000615.26","No alias","Cyanophora paradoxa","(at4g35740 : 207.0) Encodes RECQ3, an ATP-dependent helicase.; RecQl3; FUNCTIONS IN: ATP binding, ATP-dependent helicase activity; INVOLVED IN: DNA recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RECQ helicase L2 (TAIR:AT1G31360.1); Has 28158 Blast hits to 28089 proteins in 2765 species: Archae - 286; Bacteria - 16813; Metazoa - 3341; Fungi - 2669; Plants - 1491; Viruses - 10; Other Eukaryotes - 3548 (source: NCBI BLink). & (reliability: 414.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000615.43","No alias","Cyanophora paradoxa","(at2g40700 : 189.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G65900.1); Has 40440 Blast hits to 37904 proteins in 2977 species: Archae - 739; Bacteria - 19708; Metazoa - 6217; Fungi - 4486; Plants - 2481; Viruses - 5; Other Eukaryotes - 6804 (source: NCBI BLink). & (p46942|db10_nicsy : 112.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 378.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000691.35","No alias","Cyanophora paradoxa","(at3g06010 : 234.0) Encodes AtCHR12, a SNF2/Brahma-type chromatin-remodeling protein.  AtCHR12 mediates temporary growth arrest in Arabidopsis upon perceiving environmental stress.; ATCHR12; FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: response to water deprivation, response to salt stress, response to heat; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT5G19310.1); Has 23556 Blast hits to 19403 proteins in 2220 species: Archae - 141; Bacteria - 6122; Metazoa - 5759; Fungi - 4503; Plants - 1859; Viruses - 268; Other Eukaryotes - 4904 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 220.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 468.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000741.29","No alias","Cyanophora paradoxa","(at1g01040 : 82.8) Encodes a Dicer homolog. Dicer is a RNA helicase involved in microRNA processing. Mutations in this locus can result in embryo lethality. Embryo shape at seed maturity is globular-elongate. Other mutants convert the floral meristems to an indeterminate state, others yet show defects in ovule development. mRNA is expressed in all shoot tissues. DCL1 is able to produce miRNAs and siRNAs.; dicer-like 1 (DCL1); CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), Double-stranded RNA-binding (InterPro:IPR001159), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Ribonuclease III (InterPro:IPR000999), Double-stranded RNA-binding-like (InterPro:IPR014720), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Dicer double-stranded RNA-binding fold (InterPro:IPR005034), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: dicer-like 3 (TAIR:AT3G43920.1). & (reliability: 165.6) &  (original description: no original description)","protein_coding"
"evm.model.tig00000786.1","No alias","Cyanophora paradoxa","(at1g48650 : 432.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: in 6 functions; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Double-stranded RNA-binding (InterPro:IPR001159), Domain of unknown function DUF1605 (InterPro:IPR011709), Double-stranded RNA-binding-like (InterPro:IPR014720), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G01130.1); Has 12982 Blast hits to 8882 proteins in 1499 species: Archae - 14; Bacteria - 5361; Metazoa - 2913; Fungi - 1651; Plants - 997; Viruses - 50; Other Eukaryotes - 1996 (source: NCBI BLink). & (reliability: 860.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000789.26","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00000789.41","No alias","Cyanophora paradoxa","(at1g27880 : 173.0) DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: DNA recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box RNA helicase family protein  (TAIR:AT4G35740.1); Has 41244 Blast hits to 39032 proteins in 2984 species: Archae - 762; Bacteria - 21282; Metazoa - 5401; Fungi - 4173; Plants - 3671; Viruses - 588; Other Eukaryotes - 5367 (source: NCBI BLink). & (reliability: 346.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000792.35","No alias","Cyanophora paradoxa","(at4g16630 : 441.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 91788 Blast hits to 67613 proteins in 3461 species: Archae - 858; Bacteria - 34733; Metazoa - 21444; Fungi - 9002; Plants - 4280; Viruses - 615; Other Eukaryotes - 20856 (source: NCBI BLink). & (p46942|db10_nicsy : 172.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 882.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000796.23","No alias","Cyanophora paradoxa","(at3g26560 : 485.0) ATP-dependent RNA helicase, putative; FUNCTIONS IN: in 6 functions; LOCATED IN: cytosol, mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Domain of unknown function DUF1605 (InterPro:IPR011709), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase family protein (TAIR:AT1G32490.2); Has 53052 Blast hits to 35825 proteins in 3176 species: Archae - 195; Bacteria - 13845; Metazoa - 17201; Fungi - 5520; Plants - 3365; Viruses - 1203; Other Eukaryotes - 11723 (source: NCBI BLink). & (reliability: 970.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000802.67","No alias","Cyanophora paradoxa","(at3g06010 : 465.0) Encodes AtCHR12, a SNF2/Brahma-type chromatin-remodeling protein.  AtCHR12 mediates temporary growth arrest in Arabidopsis upon perceiving environmental stress.; ATCHR12; FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: response to water deprivation, response to salt stress, response to heat; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT5G19310.1); Has 23556 Blast hits to 19403 proteins in 2220 species: Archae - 141; Bacteria - 6122; Metazoa - 5759; Fungi - 4503; Plants - 1859; Viruses - 268; Other Eukaryotes - 4904 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 361.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 930.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000826.20","No alias","Cyanophora paradoxa","(at5g43530 : 117.0) Helicase protein with RING/U-box domain; FUNCTIONS IN: in 6 functions; LOCATED IN: chloroplast envelope; EXPRESSED IN: shoot apex, embryo, male gametophyte, flower, seed; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), HIP116, Rad5p N-terminal (InterPro:IPR014905), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: DNA/RNA helicase protein (TAIR:AT5G22750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 234.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000842.2","No alias","Cyanophora paradoxa","(at3g26560 : 568.0) ATP-dependent RNA helicase, putative; FUNCTIONS IN: in 6 functions; LOCATED IN: cytosol, mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Domain of unknown function DUF1605 (InterPro:IPR011709), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase family protein (TAIR:AT1G32490.2); Has 53052 Blast hits to 35825 proteins in 3176 species: Archae - 195; Bacteria - 13845; Metazoa - 17201; Fungi - 5520; Plants - 3365; Viruses - 1203; Other Eukaryotes - 11723 (source: NCBI BLink). & (reliability: 1136.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000863.2","No alias","Cyanophora paradoxa","(at3g54280 : 205.0) ROOT GROWTH DEFECTIVE 3 (RGD3); FUNCTIONS IN: helicase activity, binding, DNA binding, nucleic acid binding, ATP binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), DEAD-like helicase, N-terminal (InterPro:IPR014001), Armadillo-type fold (InterPro:IPR016024), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT3G06010.1). & (q7g8y3|isw2_orysa : 181.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 410.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000865.28","No alias","Cyanophora paradoxa","(at1g20960 : 1091.0) embryo defective 1507 (emb1507); FUNCTIONS IN: in 6 functions; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Sec63 domain (InterPro:IPR004179), Sec63 domain, subgroup (InterPro:IPR018127), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase (TAIR:AT2G42270.1). & (reliability: 2182.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000882.1","No alias","Cyanophora paradoxa","(at4g32700 : 271.0) Encodes a homolog of Drosophila MUS308 and mammalian DNA polymerase, which prevent spontaneous or DNA damage-induced production of DNA double strand breaks. Two conserved functional domains: an N-terminal superfamily II DNA/RNA helicase domain and a C-terminal prokaryotic-type DNA polymerase I domain. Required for regulated cell division and differentiation in meristems. Mutant plants show morphological defects, such as short roots, serrated leaves, and fasciation, as well as defective patterns of cell division and differentiation in the meristem. Mutant plants had 2.5 to 4.5-fold higher expression of ATGR1, ATBRCA1 and RAD51 genes. TEB is required for normal  progression of DNA replication and for correct expression of genes during development.; helicases;ATP-dependent helicases;nucleic acid binding;ATP binding;DNA-directed DNA polymerases;DNA binding; FUNCTIONS IN: in 6 functions; INVOLVED IN: regulation of gene expression, DNA replication, DNA recombination, photomorphogenesis; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA-directed DNA polymerase, family A, palm domain (InterPro:IPR001098), DNA/RNA helicase, C-terminal (InterPro:IPR001650), DNA polymerase A domain (InterPro:IPR002298), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase (TAIR:AT2G42270.1); Has 17628 Blast hits to 16579 proteins in 2941 species: Archae - 600; Bacteria - 7507; Metazoa - 1254; Fungi - 1190; Plants - 590; Viruses - 412; Other Eukaryotes - 6075 (source: NCBI BLink). & (reliability: 542.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000970.17","No alias","Cyanophora paradoxa","(p35683|if4a_orysa : 555.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Oryza sativa (Rice) & (at1g54270 : 547.0) member of eIF4A - eukaryotic initiation factor 4A; eif4a-2 (EIF4A-2); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 4A1 (TAIR:AT3G13920.4). & (reliability: 1040.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000983.26","No alias","Cyanophora paradoxa","(at2g13370 : 651.0) chromatin remodeling 5 (CHR5); FUNCTIONS IN: chromatin binding, helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: chromatin assembly or disassembly; LOCATED IN: chromatin, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), Homeodomain-like (InterPro:IPR009057), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor CHD3 (PICKLE) (TAIR:AT2G25170.1); Has 38529 Blast hits to 28045 proteins in 2467 species: Archae - 189; Bacteria - 9973; Metazoa - 8887; Fungi - 6205; Plants - 2508; Viruses - 447; Other Eukaryotes - 10320 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 453.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1302.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000984.27","No alias","Cyanophora paradoxa","(at1g32490 : 711.0) Encodes a homolog of the yeast PRP2 protein, one of four related DEAH RNA helicases identified as essential cofactors for RNA splicing.; ENHANCED SILENCING PHENOTYPE 3 (ESP3); FUNCTIONS IN: helicase activity, ATP-dependent RNA helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; INVOLVED IN: RNA splicing, posttranscriptional gene silencing by RNA, embryo development ending in seed dormancy; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: helicase domain-containing protein (TAIR:AT2G35340.1). & (reliability: 1422.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001027.29","No alias","Cyanophora paradoxa","(at4g15850 : 89.4) plant DEAD box-like RNA helicase.; RNA helicase 1 (RH1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT4G16630.1); Has 38711 Blast hits to 38056 proteins in 2969 species: Archae - 603; Bacteria - 19125; Metazoa - 5736; Fungi - 4393; Plants - 2535; Viruses - 13; Other Eukaryotes - 6306 (source: NCBI BLink). & (reliability: 178.8) &  (original description: no original description)","protein_coding"
"evm.model.tig00001049.35","No alias","Cyanophora paradoxa","(at1g55150 : 476.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 46818 Blast hits to 45969 proteins in 3127 species: Archae - 940; Bacteria - 23848; Metazoa - 6439; Fungi - 4774; Plants - 2718; Viruses - 21; Other Eukaryotes - 8078 (source: NCBI BLink). & (p46942|db10_nicsy : 338.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 952.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001071.15","No alias","Cyanophora paradoxa","(at3g09720 : 417.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, nucleic acid binding, ATP binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 47831 Blast hits to 47082 proteins in 3124 species: Archae - 967; Bacteria - 25249; Metazoa - 6167; Fungi - 4801; Plants - 2681; Viruses - 34; Other Eukaryotes - 7932 (source: NCBI BLink). & (p46942|db10_nicsy : 206.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 834.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001086.7","No alias","Cyanophora paradoxa","(at4g00660 : 672.0) RNAhelicase-like 8 (RH8); FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: viral reproduction, virus-host interaction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G45810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p41380|if4a3_nicpl : 276.0) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 1344.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001107.26","No alias","Cyanophora paradoxa","(at3g54280 : 157.0) ROOT GROWTH DEFECTIVE 3 (RGD3); FUNCTIONS IN: helicase activity, binding, DNA binding, nucleic acid binding, ATP binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), DEAD-like helicase, N-terminal (InterPro:IPR014001), Armadillo-type fold (InterPro:IPR016024), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT3G06010.1). & (q7g8y3|isw2_orysa : 85.1) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 314.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001265.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00001304.2","No alias","Cyanophora paradoxa","(at5g43530 : 228.0) Helicase protein with RING/U-box domain; FUNCTIONS IN: in 6 functions; LOCATED IN: chloroplast envelope; EXPRESSED IN: shoot apex, embryo, male gametophyte, flower, seed; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), HIP116, Rad5p N-terminal (InterPro:IPR014905), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: DNA/RNA helicase protein (TAIR:AT5G22750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 442.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001339.22","No alias","Cyanophora paradoxa","(at3g19760 : 627.0) Encodes an RNA helicase that may be a component of the Exon Junction Complex. Subcellular localization is modulated by stress. Under normal conditions it is localized to the nuceloplasm but under hyopoxic conditions it localizes to the nucleolus and splicing speckles.; eukaryotic initiation factor 4A-III (EIF4A-III); FUNCTIONS IN: protein binding, ATP-dependent helicase activity; INVOLVED IN: mRNA processing, response to hypoxia; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G51380.1); Has 50040 Blast hits to 49280 proteins in 3163 species: Archae - 836; Bacteria - 27183; Metazoa - 6400; Fungi - 4843; Plants - 2693; Viruses - 42; Other Eukaryotes - 8043 (source: NCBI BLink). & (p41380|if4a3_nicpl : 619.0) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 1254.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001376.20","No alias","Cyanophora paradoxa","(at5g11170 : 543.0) DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; INVOLVED IN: response to cadmium ion; LOCATED IN: nucleolus; EXPRESSED IN: guard cell, root, cultured cell; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box RNA helicase family protein  (TAIR:AT5G11200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q40471|if4a9_tobac : 218.0) Eukaryotic initiation factor 4A-9 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-9) (eIF-4A-9) - Nicotiana tabacum (Common tobacco) & (reliability: 1086.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020531.53","No alias","Cyanophora paradoxa","(at5g13010 : 988.0) embryo defective 3011 (EMB3011); FUNCTIONS IN: RNA helicase activity, helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, putative (TAIR:AT3G26560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1976.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020544.5","No alias","Cyanophora paradoxa","(at3g58570 : 468.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G42520.1); Has 86488 Blast hits to 59724 proteins in 3531 species: Archae - 886; Bacteria - 35070; Metazoa - 23291; Fungi - 6787; Plants - 8100; Viruses - 385; Other Eukaryotes - 11969 (source: NCBI BLink). & (p46942|db10_nicsy : 280.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 936.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020553.196","No alias","Cyanophora paradoxa","(at3g58510 : 419.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; LOCATED IN: nucleolus, peroxisome, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G42520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p46942|db10_nicsy : 219.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 838.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020556.3","No alias","Cyanophora paradoxa","(at3g46960 : 85.9) RNA helicase, ATP-dependent, SK12/DOB1 protein; FUNCTIONS IN: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DSH, C-terminal (InterPro:IPR012961), DEAD-like helicase, N-terminal (InterPro:IPR014001), RNA helicase, ATP-dependent, SK12/DOB1 (InterPro:IPR016438), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase, ATP-dependent, SK12/DOB1 protein (TAIR:AT1G59760.1); Has 10417 Blast hits to 7271 proteins in 1110 species: Archae - 777; Bacteria - 3025; Metazoa - 1455; Fungi - 1476; Plants - 602; Viruses - 48; Other Eukaryotes - 3034 (source: NCBI BLink). & (reliability: 166.4) &  (original description: no original description)","protein_coding"
"evm.model.tig00020556.80","No alias","Cyanophora paradoxa","(at1g08600 : 177.0) ATRX; FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: homolog of RAD54 (TAIR:AT3G19210.1). & (q7g8y3|isw2_orysa : 110.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 354.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020563.175","No alias","Cyanophora paradoxa","(at1g55150 : 310.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 46818 Blast hits to 45969 proteins in 3127 species: Archae - 940; Bacteria - 23848; Metazoa - 6439; Fungi - 4774; Plants - 2718; Viruses - 21; Other Eukaryotes - 8078 (source: NCBI BLink). & (p46942|db10_nicsy : 249.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 620.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020563.179","No alias","Cyanophora paradoxa",""(at3g19980 : 471.0) Encodes catalytic subunit of serine/threonine protein phosphatase 2A.  It can associate with phytochromes A and B in vitro.  Mutant plants display an accelerated flowering phenotype.; ""flower-specific, phytochrome-associated protein phosphatase 3"" (FYPP3); CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT1G50370.1); Has 6822 Blast hits to 6670 proteins in 515 species: Archae - 81; Bacteria - 277; Metazoa - 2341; Fungi - 1410; Plants - 975; Viruses - 8; Other Eukaryotes - 1730 (source: NCBI BLink). & (q9xgh7|pp2a_tobac : 362.0) Serine/threonine-protein phosphatase PP2A catalytic subunit (EC 3.1.3.16) - Nicotiana tabacum (Common tobacco) & (reliability: 942.0) &  (original description: no original description)"","protein_coding"
"evm.model.tig00020604.24","No alias","Cyanophora paradoxa","(at5g54910 : 437.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G65900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p46942|db10_nicsy : 149.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 874.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020610.32","No alias","Cyanophora paradoxa","(at3g61240 : 214.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G45810.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p41380|if4a3_nicpl : 189.0) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 428.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020614.39","No alias","Cyanophora paradoxa","(at3g19210 : 499.0) Encodes RAD54, a member of the SWI2/SNF2 family of DNA-stimulated ATPases.  Functions in DNA repair via homologous recombination.; homolog of RAD54 (RAD54); FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: DNA repair, response to gamma radiation, double-strand break repair via homologous recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: style (sensu Poaceae), hydathode, root, petiole; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: switch 2 (TAIR:AT1G03750.1). & (q7g8y3|isw2_orysa : 192.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 998.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020614.60","No alias","Cyanophora paradoxa","(at5g22750 : 279.0) DNA repair gene. gamma-radiation hypersensitive (RAD5) involved in stable transformation and T-DNA transfer; RAD5; FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA mediated transformation; EXPRESSED IN: embryo, sperm cell, seed; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), HIP116, Rad5p N-terminal (InterPro:IPR014905), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Helicase protein with RING/U-box domain (TAIR:AT5G43530.1); Has 27107 Blast hits to 18179 proteins in 1771 species: Archae - 108; Bacteria - 7266; Metazoa - 8140; Fungi - 5089; Plants - 2446; Viruses - 173; Other Eukaryotes - 3885 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 84.7) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 558.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020675.30","No alias","Cyanophora paradoxa","(at3g27730 : 282.0) DNA helicase required for interference-sensitive meiotic crossover events.; ROCK-N-ROLLERS (RCK); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Sec63 domain (InterPro:IPR004179), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase (TAIR:AT5G61140.2); Has 10425 Blast hits to 9108 proteins in 1594 species: Archae - 861; Bacteria - 4193; Metazoa - 1363; Fungi - 1417; Plants - 555; Viruses - 24; Other Eukaryotes - 2012 (source: NCBI BLink). & (reliability: 564.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020684.38","No alias","Cyanophora paradoxa","(at5g05450 : 444.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G71370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q40468|if415_tobac : 166.0) Eukaryotic initiation factor 4A-15 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-15) (eIF-4A-15) - Nicotiana tabacum (Common tobacco) & (reliability: 856.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020684.64","No alias","Cyanophora paradoxa","(at5g63120 : 428.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G55150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p46942|db10_nicsy : 363.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 848.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020713.11","No alias","Cyanophora paradoxa","(at1g63250 : 218.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G07750.1); Has 39480 Blast hits to 38845 proteins in 2963 species: Archae - 566; Bacteria - 19506; Metazoa - 5817; Fungi - 4606; Plants - 2531; Viruses - 8; Other Eukaryotes - 6446 (source: NCBI BLink). & (q41382|rh7_spiol : 123.0) DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) & (reliability: 436.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020713.13","No alias","Cyanophora paradoxa","(at5g08610 : 174.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G08620.1); Has 49840 Blast hits to 44437 proteins in 3094 species: Archae - 842; Bacteria - 25196; Metazoa - 7587; Fungi - 5309; Plants - 2787; Viruses - 50; Other Eukaryotes - 8069 (source: NCBI BLink). & (p46942|db10_nicsy : 114.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 348.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020734.25","No alias","Cyanophora paradoxa","(at3g22330 : 256.0) DEAD-box protein required for efficient group II  intron splicing in mitochondria.; putative mitochondrial RNA helicase 2 (PMH2); FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; INVOLVED IN: response to cold, Group II intron splicing; LOCATED IN: mitochondrion, nucleolus, cell wall, protein complex; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase (RH3) (TAIR:AT5G26742.2); Has 113280 Blast hits to 72794 proteins in 3598 species: Archae - 1390; Bacteria - 52148; Metazoa - 22767; Fungi - 9352; Plants - 8202; Viruses - 661; Other Eukaryotes - 18760 (source: NCBI BLink). & (q41382|rh7_spiol : 227.0) DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) & (reliability: 512.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020800.32","No alias","Cyanophora paradoxa","(at1g05120 : 113.0) Helicase protein with RING/U-box domain; FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G02670.1); Has 29218 Blast hits to 14448 proteins in 1607 species: Archae - 124; Bacteria - 8622; Metazoa - 6656; Fungi - 6694; Plants - 2674; Viruses - 189; Other Eukaryotes - 4259 (source: NCBI BLink). & (reliability: 226.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020816.103","No alias","Cyanophora paradoxa","(at5g39840 : 371.0) ATP-dependent RNA helicase, mitochondrial, putative; FUNCTIONS IN: helicase activity, ATP-dependent RNA helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial degradasome RNA helicase subunit C-terminal (InterPro:IPR022192), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, mitochondrial (SUV3) (TAIR:AT4G14790.1); Has 4068 Blast hits to 4044 proteins in 754 species: Archae - 43; Bacteria - 1236; Metazoa - 267; Fungi - 388; Plants - 157; Viruses - 16; Other Eukaryotes - 1961 (source: NCBI BLink). & (reliability: 676.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020825.19","No alias","Cyanophora paradoxa","(at2g13370 : 429.0) chromatin remodeling 5 (CHR5); FUNCTIONS IN: chromatin binding, helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: chromatin assembly or disassembly; LOCATED IN: chromatin, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), Homeodomain-like (InterPro:IPR009057), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor CHD3 (PICKLE) (TAIR:AT2G25170.1); Has 38529 Blast hits to 28045 proteins in 2467 species: Archae - 189; Bacteria - 9973; Metazoa - 8887; Fungi - 6205; Plants - 2508; Viruses - 447; Other Eukaryotes - 10320 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 344.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 858.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020848.20","No alias","Cyanophora paradoxa","(at5g60990 : 445.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase 36 (TAIR:AT1G16280.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p46942|db10_nicsy : 182.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 890.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020848.31","No alias","Cyanophora paradoxa","(at4g35740 : 260.0) Encodes RECQ3, an ATP-dependent helicase.; RecQl3; FUNCTIONS IN: ATP binding, ATP-dependent helicase activity; INVOLVED IN: DNA recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RECQ helicase L2 (TAIR:AT1G31360.1); Has 28158 Blast hits to 28089 proteins in 2765 species: Archae - 286; Bacteria - 16813; Metazoa - 3341; Fungi - 2669; Plants - 1491; Viruses - 10; Other Eukaryotes - 3548 (source: NCBI BLink). & (reliability: 520.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020848.66","No alias","Cyanophora paradoxa","(at2g44980 : 201.0) SNF2 domain-containing protein / helicase domain-containing protein; FUNCTIONS IN: transcription regulator activity, helicase activity, DNA binding, nucleic acid binding, ATP binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor17 (TAIR:AT5G18620.2); Has 17488 Blast hits to 15031 proteins in 1958 species: Archae - 101; Bacteria - 5047; Metazoa - 3666; Fungi - 3968; Plants - 1607; Viruses - 135; Other Eukaryotes - 2964 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 190.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 402.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020903.17","No alias","Cyanophora paradoxa","(at2g47330 : 453.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G20920.1); Has 46798 Blast hits to 46047 proteins in 3085 species: Archae - 817; Bacteria - 24489; Metazoa - 6167; Fungi - 4661; Plants - 2616; Viruses - 11; Other Eukaryotes - 8037 (source: NCBI BLink). & (p46942|db10_nicsy : 280.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 906.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020904.65","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00020912.86","No alias","Cyanophora paradoxa","(at1g08600 : 154.0) ATRX; FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: homolog of RAD54 (TAIR:AT3G19210.1). & (q7g8y3|isw2_orysa : 84.7) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 308.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020943.85","No alias","Cyanophora paradoxa","(at3g16840 : 182.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 60083 Blast hits to 51461 proteins in 3186 species: Archae - 589; Bacteria - 20345; Metazoa - 13239; Fungi - 7387; Plants - 3446; Viruses - 273; Other Eukaryotes - 14804 (source: NCBI BLink). & (p46942|db10_nicsy : 93.2) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 364.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020960.24","No alias","Cyanophora paradoxa","(at2g13370 : 202.0) chromatin remodeling 5 (CHR5); FUNCTIONS IN: chromatin binding, helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: chromatin assembly or disassembly; LOCATED IN: chromatin, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), Homeodomain-like (InterPro:IPR009057), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor CHD3 (PICKLE) (TAIR:AT2G25170.1); Has 38529 Blast hits to 28045 proteins in 2467 species: Archae - 189; Bacteria - 9973; Metazoa - 8887; Fungi - 6205; Plants - 2508; Viruses - 447; Other Eukaryotes - 10320 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 173.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 404.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020961.28","No alias","Cyanophora paradoxa","(at4g35740 : 303.0) Encodes RECQ3, an ATP-dependent helicase.; RecQl3; FUNCTIONS IN: ATP binding, ATP-dependent helicase activity; INVOLVED IN: DNA recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RECQ helicase L2 (TAIR:AT1G31360.1); Has 28158 Blast hits to 28089 proteins in 2765 species: Archae - 286; Bacteria - 16813; Metazoa - 3341; Fungi - 2669; Plants - 1491; Viruses - 10; Other Eukaryotes - 3548 (source: NCBI BLink). & (p46942|db10_nicsy : 90.5) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 580.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020961.8","No alias","Cyanophora paradoxa","(at4g09730 : 256.0) Encodes RH39, a DEAD-box protein involved in the introduction of the hidden break into the 23S rRNA in the chloroplasts. Recombinant RH39 binds to the 23S rRNA in a segment adjacent to the stem-loop creating the hidden break target loop in a sequence-dependent manner. Has ATP-hydrolyzing activity at a Kcat of 5.3 /min in the presence of rRNA sequence. Mutants have drastically reduced level of level of ribulose 1,5-bisphosphate carboxylase/oxygenase.; RH39 (RH39); FUNCTIONS IN: LSU rRNA binding, ATPase activity, ATP-dependent helicase activity; INVOLVED IN: chloroplast ribulose bisphosphate carboxylase complex biogenesis, chloroplast rRNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT3G06980.1); Has 40425 Blast hits to 39698 proteins in 3032 species: Archae - 675; Bacteria - 19989; Metazoa - 5933; Fungi - 4498; Plants - 2407; Viruses - 9; Other Eukaryotes - 6914 (source: NCBI BLink). & (p46942|db10_nicsy : 124.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 512.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021012.22","No alias","Cyanophora paradoxa","(at1g48310 : 352.0) chromatin remodeling factor18 (CHR18); FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein (TAIR:AT5G07810.1); Has 16435 Blast hits to 14312 proteins in 1741 species: Archae - 101; Bacteria - 4551; Metazoa - 3441; Fungi - 3785; Plants - 1315; Viruses - 143; Other Eukaryotes - 3099 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 110.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 704.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021012.34","No alias","Cyanophora paradoxa","(at5g51280 : 653.0) DEAD-box protein abstrakt, putative; FUNCTIONS IN: helicase activity, zinc ion binding, ATP-dependent helicase activity, nucleic acid binding, ATP binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, CCHC-type (InterPro:IPR001878), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT4G33370.1); Has 46358 Blast hits to 45535 proteins in 3129 species: Archae - 906; Bacteria - 23651; Metazoa - 6388; Fungi - 4930; Plants - 2690; Viruses - 10; Other Eukaryotes - 7783 (source: NCBI BLink). & (p46942|db10_nicsy : 246.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1270.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021012.40","No alias","Cyanophora paradoxa","(at1g48310 : 304.0) chromatin remodeling factor18 (CHR18); FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein (TAIR:AT5G07810.1); Has 16435 Blast hits to 14312 proteins in 1741 species: Archae - 101; Bacteria - 4551; Metazoa - 3441; Fungi - 3785; Plants - 1315; Viruses - 143; Other Eukaryotes - 3099 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 96.3) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 608.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021014.10","No alias","Cyanophora paradoxa","(at5g22750 : 175.0) DNA repair gene. gamma-radiation hypersensitive (RAD5) involved in stable transformation and T-DNA transfer; RAD5; FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA mediated transformation; EXPRESSED IN: embryo, sperm cell, seed; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), HIP116, Rad5p N-terminal (InterPro:IPR014905), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Helicase protein with RING/U-box domain (TAIR:AT5G43530.1); Has 27107 Blast hits to 18179 proteins in 1771 species: Archae - 108; Bacteria - 7266; Metazoa - 8140; Fungi - 5089; Plants - 2446; Viruses - 173; Other Eukaryotes - 3885 (source: NCBI BLink). & (reliability: 350.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021094.26","No alias","Cyanophora paradoxa","(at2g35920 : 157.0) RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G04895.1); Has 15667 Blast hits to 10761 proteins in 1709 species: Archae - 0; Bacteria - 5024; Metazoa - 4470; Fungi - 1848; Plants - 1329; Viruses - 777; Other Eukaryotes - 2219 (source: NCBI BLink). & (reliability: 314.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021105.35","No alias","Cyanophora paradoxa","(at5g43530 : 225.0) Helicase protein with RING/U-box domain; FUNCTIONS IN: in 6 functions; LOCATED IN: chloroplast envelope; EXPRESSED IN: shoot apex, embryo, male gametophyte, flower, seed; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), HIP116, Rad5p N-terminal (InterPro:IPR014905), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: DNA/RNA helicase protein (TAIR:AT5G22750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 109.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 446.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021122.18","No alias","Cyanophora paradoxa","(at1g16280 : 275.0) RNA helicase 36 (RH36); FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; INVOLVED IN: post-embryonic development, embryo sac development, rRNA processing; LOCATED IN: nucleus; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 43946 Blast hits to 42938 proteins in 3095 species: Archae - 969; Bacteria - 21832; Metazoa - 6240; Fungi - 4948; Plants - 2606; Viruses - 36; Other Eukaryotes - 7315 (source: NCBI BLink). & (p35683|if4a_orysa : 147.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Oryza sativa (Rice) & (reliability: 550.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021127.75","No alias","Cyanophora paradoxa","(at2g35920 : 181.0) RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G04895.1); Has 15667 Blast hits to 10761 proteins in 1709 species: Archae - 0; Bacteria - 5024; Metazoa - 4470; Fungi - 1848; Plants - 1329; Viruses - 777; Other Eukaryotes - 2219 (source: NCBI BLink). & (reliability: 338.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021135.41","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding"
"evm.model.tig00021168.27","No alias","Cyanophora paradoxa","(at2g33730 : 362.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G28180.1); Has 125674 Blast hits to 72393 proteins in 3317 species: Archae - 1039; Bacteria - 55089; Metazoa - 31149; Fungi - 11223; Plants - 5926; Viruses - 327; Other Eukaryotes - 20921 (source: NCBI BLink). & (p46942|db10_nicsy : 201.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 724.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021275.25","No alias","Cyanophora paradoxa","(q7g8y3|isw2_orysa : 367.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (at3g06400 : 365.0) Encodes a SWI2/SNF2 chromatin remodeling protein belonging to the ISWI family. Involved in nuclear proliferation during megagametogenesis and cell expansion in the sporophyte. Constitutively expressed. RNAi induced loss of function in megagametogenesis results in female sterility.35S:RNAi plants have reduced stature.; chromatin-remodeling protein 11 (CHR11); FUNCTIONS IN: in 7 functions; INVOLVED IN: cell growth, embryo sac development; LOCATED IN: nucleus, chromatin remodeling complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, nucleosome remodelling ISWI, HAND domain (InterPro:IPR015194), SANT, eukarya (InterPro:IPR017884), SNF2-related (InterPro:IPR000330), SANT, DNA-binding (InterPro:IPR001005), SLIDE (InterPro:IPR015195), Homeodomain-like (InterPro:IPR009057), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor17 (TAIR:AT5G18620.2). & (reliability: 730.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021293.6","No alias","Cyanophora paradoxa","(at5g22750 : 259.0) DNA repair gene. gamma-radiation hypersensitive (RAD5) involved in stable transformation and T-DNA transfer; RAD5; FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA mediated transformation; EXPRESSED IN: embryo, sperm cell, seed; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), HIP116, Rad5p N-terminal (InterPro:IPR014905), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Helicase protein with RING/U-box domain (TAIR:AT5G43530.1); Has 27107 Blast hits to 18179 proteins in 1771 species: Archae - 108; Bacteria - 7266; Metazoa - 8140; Fungi - 5089; Plants - 2446; Viruses - 173; Other Eukaryotes - 3885 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 80.9) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 518.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021346.2","No alias","Cyanophora paradoxa","(at1g12770 : 94.4) Encodes a DEAD-box RNA helicase that  localizes to mitochondria and is essential for regulating cell-to-cell transport via plasmodesmata.; embryo defective 1586 (EMB1586); FUNCTIONS IN: RNA helicase activity; INVOLVED IN: plasmodesma organization, plasmodesmata-mediated intercellular transport, embryo development ending in seed dormancy; LOCATED IN: mitochondrion; EXPRESSED IN: embryo, root, flower, shoot meristem; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 38833 Blast hits to 38121 proteins in 2993 species: Archae - 753; Bacteria - 18819; Metazoa - 5837; Fungi - 4441; Plants - 2445; Viruses - 12; Other Eukaryotes - 6526 (source: NCBI BLink). & (reliability: 188.8) &  (original description: no original description)","protein_coding"
"evm.model.tig00021350.23","No alias","Cyanophora paradoxa","(at1g35530 : 200.0) DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: in 6 functions; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G36020.1). & (reliability: 400.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021463.8","No alias","Cyanophora paradoxa","(at2g18760 : 524.0) chromatin remodeling 8 (CHR8); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; INVOLVED IN: DNA repair, response to gamma radiation; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling 24 (TAIR:AT5G63950.1); Has 17230 Blast hits to 14463 proteins in 1653 species: Archae - 99; Bacteria - 4180; Metazoa - 3846; Fungi - 4219; Plants - 1677; Viruses - 118; Other Eukaryotes - 3091 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 248.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1048.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021501.9","No alias","Cyanophora paradoxa","(at3g57300 : 465.0) Encodes the Arabidopsis INO80 ortholog of the SWI/SNF ATPase family.  Functions as a positive regulator of DNA homologous recombination (HR).  In INO80 mutants, the HR frequency is reduced to 15% of that in the wild-type.  Mutation in INO80 does not affect sensitivity to genotoxic agents and efficiency of T-DNA integration.  INO80 was also shown to regulate a subset of the Arabidopsis transcriptome.; INO80 ortholog (INO80); FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: somatic cell DNA recombination, positive regulation of DNA repair, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA binding domain, INO80 (InterPro:IPR020838), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein (TAIR:AT3G12810.1). & (q7g8y3|isw2_orysa : 244.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 930.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021589.29","No alias","Cyanophora paradoxa","(at3g26560 : 868.0) ATP-dependent RNA helicase, putative; FUNCTIONS IN: in 6 functions; LOCATED IN: cytosol, mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Domain of unknown function DUF1605 (InterPro:IPR011709), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase family protein (TAIR:AT1G32490.2); Has 53052 Blast hits to 35825 proteins in 3176 species: Archae - 195; Bacteria - 13845; Metazoa - 17201; Fungi - 5520; Plants - 3365; Viruses - 1203; Other Eukaryotes - 11723 (source: NCBI BLink). & (reliability: 1736.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021623.13","No alias","Cyanophora paradoxa","(at2g25170 : 464.0) Encodes a SWI/SWF nuclear-localized chromatin remodeling factor of the CHD3 group. Involved in post-germination repression of embryonic development. Acts with GA to establish repression of embryonic genes upon germination. Protein preferentially accumulates in differentiating tissues. Loss of function alleles are associated with expression of embryonic traits in adult plants and derepression of embryonic genes such as PHEROS1.  Is an extragenic suppressor of slr2 (SSL2).  Mutations in PKL (SSL2) restores lateral root formation in the slr2 mutant slr-1.  It was proposed that PKL/SSL2-mediated chromatin remodeling negatively regulates auxin-mediated LR formation in Arabidopsis.; PICKLE (PKL); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1087 (InterPro:IPR009463), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Protein of unknown function DUF1086 (InterPro:IPR009462), Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor, putative (TAIR:AT4G31900.1); Has 20234 Blast hits to 17178 proteins in 1958 species: Archae - 161; Bacteria - 5176; Metazoa - 5098; Fungi - 4334; Plants - 1876; Viruses - 134; Other Eukaryotes - 3455 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 369.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 872.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021760.3","No alias","Cyanophora paradoxa","(at1g08600 : 223.0) ATRX; FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: homolog of RAD54 (TAIR:AT3G19210.1). & (reliability: 446.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00022075.25","No alias","Cyanophora paradoxa","(at3g62310 : 1059.0) RNA helicase family protein; FUNCTIONS IN: RNA helicase activity, helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase family protein (TAIR:AT2G47250.1); Has 10517 Blast hits to 9531 proteins in 1639 species: Archae - 4; Bacteria - 3473; Metazoa - 2472; Fungi - 1291; Plants - 883; Viruses - 640; Other Eukaryotes - 1754 (source: NCBI BLink). & (reliability: 2118.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00022075.32","No alias","Cyanophora paradoxa","(at1g77030 : 499.0) hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides;ATP-dependent helicases;nucleic acid binding;ATP binding;RNA binding;helicases; FUNCTIONS IN: in 6 functions; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DBP10CT (InterPro:IPR012541), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 42888 Blast hits to 42073 proteins in 3063 species: Archae - 831; Bacteria - 21864; Metazoa - 5973; Fungi - 4375; Plants - 2654; Viruses - 31; Other Eukaryotes - 7160 (source: NCBI BLink). & (q41741|if4a_maize : 174.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Zea mays (Maize) & (reliability: 998.0) &  (original description: no original description)","protein_coding"
"Glyma.01G010400","No alias","Glycine max","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Glyma.01G040900","No alias","Glycine max","RNA helicase family protein","protein_coding"
"Glyma.01G060700","No alias","Glycine max","RNA helicase family protein","protein_coding"
"Glyma.01G073400","No alias","Glycine max","SNF2 domain-containing protein / helicase domain-containing protein","protein_coding"
"Glyma.01G142700","No alias","Glycine max","RNA helicase family protein","protein_coding"
"Glyma.01G175300","No alias","Glycine max","chromatin remodeling 1","protein_coding"
"Glyma.01G229400","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.01G235700","No alias","Glycine max","ATP-dependent RNA helicase, mitochondrial (SUV3)","protein_coding"
"Glyma.01G244700","No alias","Glycine max","homolog of RAD54","protein_coding"
"Glyma.02G010500","No alias","Glycine max","RNA helicase family protein","protein_coding"
"Glyma.02G026751","No alias","Glycine max","DEAD/DEAH box helicase, putative","protein_coding"
"Glyma.02G068300","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.02G078100","No alias","Glycine max","RH39","protein_coding"
"Glyma.02G119000","No alias","Glycine max","RNA helicase family protein","protein_coding"
"Glyma.02G169600","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.02G174100","No alias","Glycine max","SNF2 domain-containing protein / helicase domain-containing protein","protein_coding"
"Glyma.02G195500","No alias","Glycine max","RNA helicase family protein","protein_coding"
"Glyma.02G219200","No alias","Glycine max","zinc ion binding;DNA binding;helicases;ATP binding;nucleic acid binding","protein_coding"
"Glyma.02G261800","No alias","Glycine max","chromatin remodeling 42","protein_coding"
"Glyma.02G281000","No alias","Glycine max","chromatin remodeling 5","protein_coding"
"Glyma.02G281200","No alias","Glycine max","putative mitochondrial RNA helicase 2","protein_coding"
"Glyma.02G282700","No alias","Glycine max","helicase in vascular tissue and tapetum","protein_coding"
"Glyma.02G290500","No alias","Glycine max","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Glyma.03G001200","No alias","Glycine max","hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides;ATP-dependent helicases;nucleic acid binding;ATP binding;RNA binding;helicases","protein_coding"
"Glyma.03G013000","No alias","Glycine max","RNAhelicase-like 8","protein_coding"
"Glyma.03G013200","No alias","Glycine max","RNAhelicase-like 8","protein_coding"
"Glyma.03G014666","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.03G014900","No alias","Glycine max","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Glyma.03G024000","No alias","Glycine max","RNA helicase family protein","protein_coding"
"Glyma.03G124900","No alias","Glycine max","DNA/RNA helicase protein","protein_coding"
"Glyma.03G133700","No alias","Glycine max","INO80 ortholog","protein_coding"
"Glyma.03G178500","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.03G220600","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.03G221200","No alias","Glycine max","RNA helicase family protein","protein_coding"
"Glyma.03G226600","No alias","Glycine max","DEAD box RNA helicase (RH3)","protein_coding"
"Glyma.03G236700","No alias","Glycine max","DEAD-box protein abstrakt, putative","protein_coding"
"Glyma.03G262100","No alias","Glycine max","dicer-like 1","protein_coding"
"Glyma.04G002600","No alias","Glycine max","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Glyma.04G052900","No alias","Glycine max","eukaryotic translation initiation factor 4A1","protein_coding"
"Glyma.04G057400","No alias","Glycine max","dicer-like 3","protein_coding"
"Glyma.04G062400","No alias","Glycine max","chromatin remodeling factor CHD3 (PICKLE)","protein_coding"
"Glyma.04G067600","No alias","Glycine max","DEAD/DEAH box RNA helicase family protein","protein_coding"
"Glyma.04G138300","No alias","Glycine max","SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein","protein_coding"
"Glyma.04G145400","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.05G005500","No alias","Glycine max","DEAD box RNA helicase family protein","protein_coding"
"Glyma.05G014800","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.05G041000","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.05G069466","No alias","Glycine max","eukaryotic initiation factor 4A-III","protein_coding"
"Glyma.05G131500","No alias","Glycine max","chromatin remodeling 4","protein_coding"
"Glyma.05G146100","No alias","Glycine max","RNA helicase family protein","protein_coding"
"Glyma.05G155100","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.05G193900","No alias","Glycine max","chromatin remodeling 24","protein_coding"
"Glyma.05G242800","No alias","Glycine max","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Glyma.06G002600","No alias","Glycine max","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Glyma.06G053200","No alias","Glycine max","eukaryotic translation initiation factor 4A1","protein_coding"
"Glyma.06G063400","No alias","Glycine max","chromatin remodeling factor CHD3 (PICKLE)","protein_coding"
"Glyma.06G069200","No alias","Glycine max","DEAD/DEAH box RNA helicase family protein","protein_coding"
"Glyma.06G199800","No alias","Glycine max","SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein","protein_coding"
"Glyma.06G201700","No alias","Glycine max","RNA helicase family protein","protein_coding"
"Glyma.06G202500","No alias","Glycine max","U5 small nuclear ribonucleoprotein helicase","protein_coding"
"Glyma.06G206000","No alias","Glycine max","nucleic acid binding;ATP-dependent helicases;ATP binding;helicases;ATP-dependent helicases","protein_coding"
"Glyma.06G209400","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.07G007400","No alias","Glycine max","eif4a-2","protein_coding"
"Glyma.07G010500","No alias","Glycine max","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Glyma.07G031400","No alias","Glycine max","DEAD/DEAH box RNA helicase family protein","protein_coding"
"Glyma.07G056600","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.07G069400","No alias","Glycine max","transcription regulatory protein SNF2, putative","protein_coding"
"Glyma.07G072700","No alias","Glycine max","RNAhelicase-like 8","protein_coding"
"Glyma.07G072900","No alias","Glycine max","RNAhelicase-like 8","protein_coding"
"Glyma.07G074800","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.07G075000","No alias","Glycine max","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Glyma.07G105302","No alias","Glycine max","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Glyma.07G157900","No alias","Glycine max","SNF2 domain-containing protein / helicase domain-containing protein","protein_coding"
"Glyma.07G164800","No alias","Glycine max","DEAD/DEAH box RNA helicase family protein","protein_coding"
"Glyma.07G192500","No alias","Glycine max","SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related","protein_coding"
"Glyma.07G250700","No alias","Glycine max","chromatin remodeling factor17","protein_coding"
"Glyma.07G252100","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.07G258400","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.07G268900","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.08G001900","No alias","Glycine max","chromatin remodeling 24","protein_coding"
"Glyma.08G012400","No alias","Glycine max","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Glyma.08G027700","No alias","Glycine max","RNA helicase, ATP-dependent, SK12/DOB1 protein","protein_coding"
"Glyma.08G050200","No alias","Glycine max","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Glyma.08G086100","No alias","Glycine max","chromatin remodeling 4","protein_coding"
"Glyma.08G102300","No alias","Glycine max","DEAD/DEAH box RNA helicase family protein","protein_coding"
"Glyma.08G113000","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.08G162000","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.08G165600","No alias","Glycine max","RNA helicase 36","protein_coding"
"Glyma.08G173500","No alias","Glycine max","U5 small nuclear ribonucleoprotein helicase, putative","protein_coding"
"Glyma.08G188100","No alias","Glycine max","DNA helicase (RECQl4A)","protein_coding"
"Glyma.08G190100","No alias","Glycine max","eif4a-2","protein_coding"
"Glyma.08G193700","No alias","Glycine max","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Glyma.08G211400","No alias","Glycine max","DEAD/DEAH box RNA helicase family protein","protein_coding"
"Glyma.08G229400","No alias","Glycine max","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Glyma.08G231300","No alias","Glycine max","RNA helicase 1","protein_coding"
"Glyma.08G238200","No alias","Glycine max","DEAD/DEAH box RNA helicase family protein","protein_coding"
"Glyma.08G291800","No alias","Glycine max","pentatricopeptide (PPR) repeat-containing protein","protein_coding"
"Glyma.08G303000","No alias","Glycine max","putative mitochondrial RNA helicase 2","protein_coding"
"Glyma.08G313100","No alias","Glycine max","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Glyma.08G339800","No alias","Glycine max","chromatin remodeling 31","protein_coding"
"Glyma.08G339900","No alias","Glycine max","chromatin remodeling 31","protein_coding"
"Glyma.08G361900","No alias","Glycine max","RNA helicase, ATP-dependent, SK12/DOB1 protein","protein_coding"
"Glyma.09G025300","No alias","Glycine max","dicer-like 2","protein_coding"
"Glyma.09G025400","No alias","Glycine max","dicer-like 2","protein_coding"
"Glyma.09G031100","No alias","Glycine max","DEAD box RNA helicase family protein","protein_coding"
"Glyma.09G052500","No alias","Glycine max","eukaryotic initiation factor 4A-III","protein_coding"
"Glyma.09G065600","No alias","Glycine max","eukaryotic translation initiation factor 4A1","protein_coding"
"Glyma.09G072400","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.09G105300","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.09G112200","No alias","Glycine max","SNF2 domain-containing protein / helicase domain-containing protein","protein_coding"
"Glyma.09G115600","No alias","Glycine max","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Glyma.09G210700","No alias","Glycine max","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Glyma.09G215200","No alias","Glycine max","RECQ helicase L2","protein_coding"
"Glyma.09G229400","No alias","Glycine max","chromatin remodeling 31","protein_coding"
"Glyma.09G234400","No alias","Glycine max","DNA binding;ATP binding;nucleic acid binding;binding;helicases;ATP binding;DNA binding;helicases","protein_coding"
"Glyma.09G257900","No alias","Glycine max","transcription regulatory protein SNF2, putative","protein_coding"
"Glyma.09G261400","No alias","Glycine max","RNAhelicase-like 8","protein_coding"
"Glyma.10G007980","No alias","Glycine max","Helicase protein with RING/U-box domain","protein_coding"
"Glyma.10G010902","No alias","Glycine max","RNA helicase family protein","protein_coding"
"Glyma.10G038300","No alias","Glycine max","chromatin remodeling 8","protein_coding"
"Glyma.10G082300","No alias","Glycine max","RNA helicase family protein","protein_coding"
"Glyma.10G106500","No alias","Glycine max","INO80 ortholog","protein_coding"
"Glyma.10G140900","No alias","Glycine max","DEAD box RNA helicase (RH3)","protein_coding"
"Glyma.10G148300","No alias","Glycine max","RECQ helicase l1","protein_coding"
"Glyma.10G152900","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.10G165000","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.10G241900","No alias","Glycine max","DEAD box RNA helicase (PRH75)","protein_coding"
"Glyma.10G250500","No alias","Glycine max","Homeotic gene regulator","protein_coding"
"Glyma.10G288200","No alias","Glycine max","SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related","protein_coding"
"Glyma.11G004100","No alias","Glycine max","Homeotic gene regulator","protein_coding"
"Glyma.11G007500","No alias","Glycine max","ATP-dependent RNA helicase, mitochondrial (SUV3)","protein_coding"
"Glyma.11G012200","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.11G067500","No alias","Glycine max","chromatin remodeling 1","protein_coding"
"Glyma.11G154800","No alias","Glycine max","SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein","protein_coding"
"Glyma.11G199100","No alias","Glycine max","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Glyma.11G201900","No alias","Glycine max","RECQ helicase SIM","protein_coding"
"Glyma.11G232900","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.11G242300","No alias","Glycine max","helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related","protein_coding"
"Glyma.11G256200","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.12G002300","No alias","Glycine max","DNA binding;ATP binding;nucleic acid binding;binding;helicases;ATP binding;DNA binding;helicases","protein_coding"
"Glyma.12G006900","No alias","Glycine max","chromatin remodeling 31","protein_coding"
"Glyma.12G115800","No alias","Glycine max","switch 2","protein_coding"
"Glyma.12G170000","No alias","Glycine max","DNA helicase (RECQl4A)","protein_coding"
"Glyma.12G175400","No alias","Glycine max","ATP-dependent helicase family protein","protein_coding"
"Glyma.12G180800","No alias","Glycine max","DNA/RNA helicase protein","protein_coding"
"Glyma.12G192700","No alias","Glycine max","Helicase protein with RING/U-box domain","protein_coding"
"Glyma.12G236100","No alias","Glycine max","SNF2 domain-containing protein / helicase domain-containing protein","protein_coding"
"Glyma.13G063500","No alias","Glycine max","ATP-dependent RNA helicase, mitochondrial, putative","protein_coding"
"Glyma.13G106200","No alias","Glycine max","eukaryotic translation initiation factor 4A1","protein_coding"
"Glyma.13G118200","No alias","Glycine max","chromatin remodeling factor18","protein_coding"
"Glyma.13G124600","No alias","Glycine max","chromatin remodeling 8","protein_coding"
"Glyma.13G156500","No alias","Glycine max","dicer-like 4","protein_coding"
"Glyma.13G168000","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.13G183900","No alias","Glycine max","SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related","protein_coding"
"Glyma.13G201800","No alias","Glycine max","SNF2 domain-containing protein / helicase domain-containing protein","protein_coding"
"Glyma.13G215900","No alias","Glycine max","chromatin-remodeling protein 11","protein_coding"
"Glyma.13G232900","No alias","Glycine max","RNA helicase family protein","protein_coding"
"Glyma.13G243600","No alias","Glycine max","SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related","protein_coding"
"Glyma.13G309700","No alias","Glycine max","Helicase protein with RING/U-box domain","protein_coding"
"Glyma.13G320000","No alias","Glycine max","DNA/RNA helicase protein","protein_coding"
"Glyma.13G324500","No alias","Glycine max","ATP-dependent helicase family protein","protein_coding"
"Glyma.13G342400","No alias","Glycine max","RNA helicase family protein","protein_coding"
"Glyma.13G347900","No alias","Glycine max","eif4a-2","protein_coding"
"Glyma.14G024300","No alias","Glycine max","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Glyma.14G031600","No alias","Glycine max","helicase in vascular tissue and tapetum","protein_coding"
"Glyma.14G033400","No alias","Glycine max","putative mitochondrial RNA helicase 2","protein_coding"
"Glyma.14G033600","No alias","Glycine max","chromatin remodeling 5","protein_coding"
"Glyma.14G114900","No alias","Glycine max","RNA helicase 1","protein_coding"
"Glyma.14G115100","No alias","Glycine max","RNA helicase 1","protein_coding"
"Glyma.14G140800","No alias","Glycine max","helicases;ATP-dependent helicases;nucleic acid binding;ATP binding;DNA-directed DNA polymerases;DNA binding","protein_coding"
"Glyma.14G217400","No alias","Glycine max","RNA helicase family protein","protein_coding"
"Glyma.15G026100","No alias","Glycine max","eif4a-2","protein_coding"
"Glyma.15G031900","No alias","Glycine max","RNA helicase family protein","protein_coding"
"Glyma.15G070100","No alias","Glycine max","SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related","protein_coding"
"Glyma.15G097000","No alias","Glycine max","chromatin remodeling factor17","protein_coding"
"Glyma.15G136300","No alias","Glycine max","DEAD box RNA helicase family protein","protein_coding"
"Glyma.15G158800","No alias","Glycine max","eukaryotic initiation factor 4A-III","protein_coding"
"Glyma.15G171800","No alias","Glycine max","eukaryotic translation initiation factor 4A1","protein_coding"
"Glyma.15G181200","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.15G253800","No alias","Glycine max","U5 small nuclear ribonucleoprotein helicase, putative","protein_coding"
"Glyma.15G261600","No alias","Glycine max","RNA helicase 36","protein_coding"
"Glyma.15G265600","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.16G025700","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.16G035100","No alias","Glycine max","transcription regulatory protein SNF2, putative","protein_coding"
"Glyma.16G046000","No alias","Glycine max","DEAD/DEAH box helicase, putative","protein_coding"
"Glyma.16G072300","No alias","Glycine max","ATP binding;ATP-dependent helicases;DNA helicases","protein_coding"
"Glyma.16G149800","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.16G221700","No alias","Glycine max","hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides;ATP-dependent helicases;nucleic acid binding;ATP binding;RNA binding;helicases","protein_coding"
"Glyma.17G001100","No alias","Glycine max","RNA helicase family protein","protein_coding"
"Glyma.17G004800","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.17G015700","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.17G022300","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.17G023600","No alias","Glycine max","chromatin remodeling factor17","protein_coding"
"Glyma.17G041700","No alias","Glycine max","chromatin remodeling factor18","protein_coding"
"Glyma.17G053200","No alias","Glycine max","eif4a-2","protein_coding"
"Glyma.17G085300","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.17G104100","No alias","Glycine max","dicer-like 4","protein_coding"
"Glyma.17G115700","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.17G123300","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.17G184800","No alias","Glycine max","RNAhelicase-like 8","protein_coding"
"Glyma.17G217300","No alias","Glycine max","chromatin remodeling factor CHD3 (PICKLE)","protein_coding"
"Glyma.17G256200","No alias","Glycine max","ATP-dependent RNA helicase, putative","protein_coding"
"Glyma.18G000800","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.18G004000","No alias","Glycine max","ATP-dependent RNA helicase, putative","protein_coding"
"Glyma.18G014800","No alias","Glycine max","helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related","protein_coding"
"Glyma.18G023900","No alias","Glycine max","chromatin remodeling 38","protein_coding"
"Glyma.18G024200","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.18G048900","No alias","Glycine max","RECQ helicase SIM","protein_coding"
"Glyma.18G051700","No alias","Glycine max","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Glyma.18G101600","No alias","Glycine max","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Glyma.18G116700","No alias","Glycine max","putative mitochondrial RNA helicase 2","protein_coding"
"Glyma.18G132200","No alias","Glycine max","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Glyma.18G155900","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.18G234700","No alias","Glycine max","transcription regulatory protein SNF2, putative","protein_coding"
"Glyma.19G006000","No alias","Glycine max","DEAD box RNA helicase family protein","protein_coding"
"Glyma.19G021800","No alias","Glycine max","ATP-dependent RNA helicase, mitochondrial, putative","protein_coding"
"Glyma.19G027600","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.19G082800","No alias","Glycine max","DEAD-box protein abstrakt, putative","protein_coding"
"Glyma.19G106000","No alias","Glycine max","DEAD/DEAH box helicase, putative","protein_coding"
"Glyma.19G136000","No alias","Glycine max","INO80 ortholog","protein_coding"
"Glyma.19G179300","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.19G217400","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.19G218200","No alias","Glycine max","RNA helicase family protein","protein_coding"
"Glyma.19G223600","No alias","Glycine max","DEAD box RNA helicase (RH3)","protein_coding"
"Glyma.19G261200","No alias","Glycine max","dicer-like 1","protein_coding"
"Glyma.20G005700","No alias","Glycine max","SNF2 domain-containing protein / helicase domain-containing protein","protein_coding"
"Glyma.20G087900","No alias","Glycine max","Helicase protein with RING/U-box domain","protein_coding"
"Glyma.20G089600","No alias","Glycine max","DEAD box RNA helicase (RH3)","protein_coding"
"Glyma.20G100800","No alias","Glycine max","SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related","protein_coding"
"Glyma.20G122600","No alias","Glycine max","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Glyma.20G143200","No alias","Glycine max","Homeotic gene regulator","protein_coding"
"Glyma.20G152200","No alias","Glycine max","DEAD box RNA helicase (PRH75)","protein_coding"
"Glyma.20G227200","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.20G235400","No alias","Glycine max","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Glyma.20G236000","No alias","Glycine max","RECQ helicase SIM","protein_coding"
"Glyma.U027200","No alias","Glycine max","chromatin remodeling 42","protein_coding"
"GRMZM2G000823","No alias","Zea mays","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"GRMZM2G001160","No alias","Zea mays","RECQ helicase l1","protein_coding"
"GRMZM2G007700","No alias","Zea mays","DEAD box RNA helicase family protein","protein_coding"
"GRMZM2G010085","No alias","Zea mays","chromatin remodeling factor17","protein_coding"
"GRMZM2G010342","No alias","Zea mays","chromatin remodeling 5","protein_coding"
"GRMZM2G012453","No alias","Zea mays","ATP-dependent RNA helicase, putative","protein_coding"
"GRMZM2G013283","No alias","Zea mays","RNA helicase family protein","protein_coding"
"GRMZM2G018947","No alias","Zea mays","eukaryotic initiation factor 4A-III","protein_coding"
"GRMZM2G020641","No alias","Zea mays","DEA(D/H)-box RNA helicase family protein","protein_coding"
"GRMZM2G021233","No alias","Zea mays","Helicase protein with RING/U-box domain","protein_coding"
"GRMZM2G024466","No alias","Zea mays","dicer-like 4","protein_coding"
"GRMZM2G026371","No alias","Zea mays","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"GRMZM2G026991","No alias","Zea mays","U5 small nuclear ribonucleoprotein helicase, putative","protein_coding"
"GRMZM2G027995","No alias","Zea mays","eukaryotic translation initiation factor 4A1","protein_coding"
"GRMZM2G028366","No alias","Zea mays","eif4a-2","protein_coding"
"GRMZM2G029258","No alias","Zea mays","ATP-dependent RNA helicase, putative","protein_coding"
"GRMZM2G030659","No alias","Zea mays","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"GRMZM2G030768","No alias","Zea mays","Helicase protein with RING/U-box domain","protein_coding"
"GRMZM2G030873","No alias","Zea mays","RNA helicase 1","protein_coding"
"GRMZM2G035068","No alias","Zea mays","DEAD/DEAH box RNA helicase family protein","protein_coding"
"GRMZM2G035807","No alias","Zea mays","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"GRMZM2G038263","No alias","Zea mays","DEAD box RNA helicase (PRH75)","protein_coding"
"GRMZM2G040762","No alias","Zea mays","dicer-like 1","protein_coding"
"GRMZM2G040995","No alias","Zea mays","RNA helicase, ATP-dependent, SK12/DOB1 protein","protein_coding"
"GRMZM2G041732","No alias","Zea mays","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"GRMZM2G043724","No alias","Zea mays","DEAD-box protein abstrakt, putative","protein_coding"
"GRMZM2G047949","No alias","Zea mays","RNA helicase, ATP-dependent, SK12/DOB1 protein","protein_coding"
"GRMZM2G049168","No alias","Zea mays","SNF2 domain-containing protein / helicase domain-containing protein","protein_coding"
"GRMZM2G052798","No alias","Zea mays","RNA helicase family protein","protein_coding"
"GRMZM2G054876","No alias","Zea mays","Helicase protein with RING/U-box domain","protein_coding"
"GRMZM2G057394","No alias","Zea mays","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"GRMZM2G057504","No alias","Zea mays","DNA/RNA helicase protein","protein_coding"
"GRMZM2G059020","No alias","Zea mays","DEA(D/H)-box RNA helicase family protein","protein_coding"
"GRMZM2G059365","No alias","Zea mays","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"GRMZM2G066440","No alias","Zea mays","DEAD box RNA helicase family protein","protein_coding"
"GRMZM2G068479","No alias","Zea mays","RNA helicase family protein","protein_coding"
"GRMZM2G070264","No alias","Zea mays","chromatin remodeling 8","protein_coding"
"GRMZM2G071025","No alias","Zea mays","chromatin remodeling 1","protein_coding"
"GRMZM2G072839","No alias","Zea mays","DEAD box RNA helicase family protein","protein_coding"
"GRMZM2G075027","No alias","Zea mays","DEA(D/H)-box RNA helicase family protein","protein_coding"
"GRMZM2G076484","No alias","Zea mays","DEA(D/H)-box RNA helicase family protein","protein_coding"
"GRMZM2G077125","No alias","Zea mays","DEAD box RNA helicase 1","protein_coding"
"GRMZM2G078275","No alias","Zea mays","ATP-dependent RNA helicase, mitochondrial (SUV3)","protein_coding"
"GRMZM2G078826","No alias","Zea mays","DEAD box RNA helicase 1","protein_coding"
"GRMZM2G080281","No alias","Zea mays","Transducin/WD40 repeat-like superfamily protein","protein_coding"
"GRMZM2G082205","No alias","Zea mays","nucleic acid binding;ATP-dependent helicases;ATP binding;helicases;ATP-dependent helicases","protein_coding"
"GRMZM2G083138","No alias","Zea mays","homolog of RAD54","protein_coding"
"GRMZM2G083580","No alias","Zea mays","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"GRMZM2G084716","No alias","Zea mays","RNA binding (RRM/RBD/RNP motifs) family protein","protein_coding"
"GRMZM2G085587","No alias","Zea mays","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"GRMZM2G086116","No alias","Zea mays","RNAhelicase-like 8","protein_coding"
"GRMZM2G088218","No alias","Zea mays","DEAD/DEAH box RNA helicase family protein","protein_coding"
"GRMZM2G090869","No alias","Zea mays","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"GRMZM2G090963","No alias","Zea mays","RECQ helicase SIM","protein_coding"
"GRMZM2G091652","No alias","Zea mays","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"GRMZM2G092327","No alias","Zea mays","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"GRMZM2G092575","No alias","Zea mays","DEAD box RNA helicase (PRH75)","protein_coding"
"GRMZM2G097289","No alias","Zea mays","Homeotic gene regulator","protein_coding"
"GRMZM2G099253","No alias","Zea mays","RNA helicase 36","protein_coding"
"GRMZM2G100043","No alias","Zea mays","DEA(D/H)-box RNA helicase family protein","protein_coding"
"GRMZM2G102625","No alias","Zea mays","Homeotic gene regulator","protein_coding"
"GRMZM2G104307","No alias","Zea mays","nucleolar protein gar2-related","protein_coding"
"GRMZM2G104795","No alias","Zea mays","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"GRMZM2G106732","No alias","Zea mays","RECQ helicase L4B","protein_coding"
"GRMZM2G107984","No alias","Zea mays","putative mitochondrial RNA helicase 2","protein_coding"
"GRMZM2G108166","No alias","Zea mays","chromatin remodeling 38","protein_coding"
"GRMZM2G111015","No alias","Zea mays","RNAhelicase-like 8","protein_coding"
"GRMZM2G113267","No alias","Zea mays","DEA(D/H)-box RNA helicase family protein","protein_coding"
"GRMZM2G116034","No alias","Zea mays","eukaryotic translation initiation factor 4A1","protein_coding"
"GRMZM2G117060","No alias","Zea mays","SNF2 domain-containing protein / helicase domain-containing protein","protein_coding"
"GRMZM2G119671","No alias","Zea mays","DEA(D/H)-box RNA helicase family protein","protein_coding"
"GRMZM2G121776","No alias","Zea mays","RNA helicase family protein","protein_coding"
"GRMZM2G121871","No alias","Zea mays","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"GRMZM2G123459","No alias","Zea mays","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"GRMZM2G125935","No alias","Zea mays","DEA(D/H)-box RNA helicase family protein","protein_coding"
"GRMZM2G126774","No alias","Zea mays","chromatin remodeling factor18","protein_coding"
"GRMZM2G129007","No alias","Zea mays","RNAhelicase-like 8","protein_coding"
"GRMZM2G129554","No alias","Zea mays","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"GRMZM2G138125","No alias","Zea mays","chromatin remodeling 24","protein_coding"
"GRMZM2G139204","No alias","Zea mays","DEA(D/H)-box RNA helicase family protein","protein_coding"
"GRMZM2G141258","No alias","Zea mays","chromatin remodeling 5","protein_coding"
"GRMZM2G143246","No alias","Zea mays","DEA(D/H)-box RNA helicase family protein","protein_coding"
"GRMZM2G144234","No alias","Zea mays","DEAD box RNA helicase family protein","protein_coding"
"GRMZM2G146041","No alias","Zea mays","switch 2","protein_coding"
"GRMZM2G146047","No alias","Zea mays","zinc finger (CCCH type) helicase family protein","protein_coding"
"GRMZM2G148249","No alias","Zea mays","DNA/RNA helicase protein","protein_coding"
"GRMZM2G149520","No alias","Zea mays","DEAD box RNA helicase (PRH75)","protein_coding"
"GRMZM2G154946","No alias","Zea mays","chromatin remodeling 31","protein_coding"
"GRMZM2G156158","No alias","Zea mays","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"GRMZM2G163849","No alias","Zea mays","transcription regulatory protein SNF2, putative","protein_coding"
"GRMZM2G164956","No alias","Zea mays","DEAD box RNA helicase (PRH75)","protein_coding"
"GRMZM2G166718","No alias","Zea mays","DEAD/DEAH box helicase, putative","protein_coding"
"GRMZM2G167347","No alias","Zea mays","DEA(D/H)-box RNA helicase family protein","protein_coding"
"GRMZM2G168096","No alias","Zea mays","DNA binding;ATP binding;nucleic acid binding;binding;helicases;ATP binding;DNA binding;helicases","protein_coding"
"GRMZM2G170061","No alias","Zea mays","RNAhelicase-like 8","protein_coding"
"GRMZM2G171450","No alias","Zea mays","DEA(D/H)-box RNA helicase family protein","protein_coding"
"GRMZM2G171801","No alias","Zea mays","DEA(D/H)-box RNA helicase family protein","protein_coding"
"GRMZM2G175867","No alias","Zea mays","RH39","protein_coding"
"GRMZM2G177165","No alias","Zea mays","chromatin remodeling 1","protein_coding"
"GRMZM2G178435","No alias","Zea mays","chromatin remodeling 31","protein_coding"
"GRMZM2G300375","No alias","Zea mays","RNA helicase family protein","protein_coding"
"GRMZM2G303752","No alias","Zea mays","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"GRMZM2G305060","No alias","Zea mays","RNA helicase family protein","protein_coding"
"GRMZM2G306348","No alias","Zea mays","DEAD/DEAH box RNA helicase family protein","protein_coding"
"GRMZM2G313553","No alias","Zea mays","SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein","protein_coding"
"GRMZM2G315176","No alias","Zea mays","DEAD/DEAH box RNA helicase family protein","protein_coding"
"GRMZM2G316191","No alias","Zea mays","chromatin remodeling 4","protein_coding"
"GRMZM2G324781","No alias","Zea mays","SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related","protein_coding"
"GRMZM2G346278","No alias","Zea mays","ATP binding;ATP-dependent helicases;DNA helicases","protein_coding"
"GRMZM2G348740","No alias","Zea mays","DEAD box RNA helicase family protein","protein_coding"
"GRMZM2G357923","No alias","Zea mays","RNA helicase family protein","protein_coding"
"GRMZM2G362850","No alias","Zea mays","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"GRMZM2G363649","No alias","Zea mays","DEAD box RNA helicase (PRH75)","protein_coding"
"GRMZM2G368658","No alias","Zea mays","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"GRMZM2G373175","No alias","Zea mays","DEA(D/H)-box RNA helicase family protein","protein_coding"
"GRMZM2G381386","No alias","Zea mays","zinc ion binding;DNA binding;helicases;ATP binding;nucleic acid binding","protein_coding"
"GRMZM2G384369","No alias","Zea mays","RNA helicase family protein","protein_coding"
"GRMZM2G385931","No alias","Zea mays","RNA helicase family protein","protein_coding"
"GRMZM2G393742","No alias","Zea mays","SNF2 domain-containing protein / helicase domain-containing protein","protein_coding"
"GRMZM2G399212","No alias","Zea mays","RNA helicase family protein","protein_coding"
"GRMZM2G403636","No alias","Zea mays","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"GRMZM2G413853","No alias","Zea mays","dicer-like 3","protein_coding"
"GRMZM2G415491","No alias","Zea mays","DEAD box RNA helicase (RH3)","protein_coding"
"GRMZM2G415538","No alias","Zea mays","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"GRMZM2G420865","No alias","Zea mays","DEA(D/H)-box RNA helicase family protein","protein_coding"
"GRMZM2G428242","No alias","Zea mays","SNF2 domain-containing protein / helicase domain-containing protein","protein_coding"
"GRMZM2G430362","No alias","Zea mays","ATP-dependent RNA helicase, mitochondrial, putative","protein_coding"
"GRMZM2G449355","No alias","Zea mays","SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related","protein_coding"
"GRMZM2G454594","No alias","Zea mays","helicases;ATP-dependent helicases;nucleic acid binding;ATP binding;DNA-directed DNA polymerases;DNA binding","protein_coding"
"GRMZM2G454619","No alias","Zea mays","DEAD box RNA helicase family protein","protein_coding"
"GRMZM2G456586","No alias","Zea mays","ATP-dependent RNA helicase, mitochondrial, putative","protein_coding"
"GRMZM2G467799","No alias","Zea mays","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"GRMZM2G468132","No alias","Zea mays","helicase in vascular tissue and tapetum","protein_coding"
"GRMZM2G469162","No alias","Zea mays","INO80 ortholog","protein_coding"
"GRMZM2G480809","No alias","Zea mays","RNA helicase family protein","protein_coding"
"GRMZM2G565140","No alias","Zea mays","putative mitochondrial RNA helicase 2","protein_coding"
"GRMZM2G574858","No alias","Zea mays","SNF2 domain-containing protein / helicase domain-containing protein","protein_coding"
"GRMZM2G703415","No alias","Zea mays","DEAD box RNA helicase family protein","protein_coding"
"GRMZM5G802858","No alias","Zea mays","DEA(D/H)-box RNA helicase family protein","protein_coding"
"GRMZM5G803297","No alias","Zea mays","ATP-dependent RNA helicase, mitochondrial, putative","protein_coding"
"GRMZM5G804064","No alias","Zea mays","DEA(D/H)-box RNA helicase family protein","protein_coding"
"GRMZM5G829297","No alias","Zea mays","SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related","protein_coding"
"GRMZM5G845674","No alias","Zea mays","ATP-dependent RNA helicase, mitochondrial, putative","protein_coding"
"GRMZM5G855311","No alias","Zea mays","helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related","protein_coding"
"GRMZM5G889429","No alias","Zea mays","DEA(D/H)-box RNA helicase family protein","protein_coding"
"GRMZM5G892645","No alias","Zea mays","DEAD/DEAH box RNA helicase family protein","protein_coding"
"GRMZM5G897976","No alias","Zea mays","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"GRMZM6G711429","No alias","Zea mays","eukaryotic translation initiation factor 4A1","protein_coding"
"HORVU0Hr1G001880.3","No alias","Hordeum vulgare","chromatin remodeling factor *(Rad5)","protein_coding"
"HORVU0Hr1G007860.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU0Hr1G020490.5","No alias","Hordeum vulgare","RNA helicase *(RCF1)","protein_coding"
"HORVU0Hr1G039590.11","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G004510.5","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G019000.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G021540.17","No alias","Hordeum vulgare","ATPase component *(CHR11/CHR17) of ISWI chromatin remodeling complexes","protein_coding"
"HORVU1Hr1G021560.26","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G038370.1","No alias","Hordeum vulgare","chromatin remodeling factor *(ATRX)","protein_coding"
"HORVU1Hr1G039880.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G042710.5","No alias","Hordeum vulgare","endoribonuclease *(DCL3)","protein_coding"
"HORVU1Hr1G046020.1","No alias","Hordeum vulgare","DDX6-type mRNA helicase *(RH12/RH8)","protein_coding"
"HORVU1Hr1G056370.1","No alias","Hordeum vulgare","RNA helicase *(Prp2)","protein_coding"
"HORVU1Hr1G056400.1","No alias","Hordeum vulgare","RNA helicase *(Prp2)","protein_coding"
"HORVU1Hr1G062970.6","No alias","Hordeum vulgare","regulatory protein *(CLSY3/4) of transacting siRNA pathway","protein_coding"
"HORVU1Hr1G065680.1","No alias","Hordeum vulgare","DNA polymerase theta *(TEB)","protein_coding"
"HORVU1Hr1G083090.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU1Hr1G091050.3","No alias","Hordeum vulgare","RNA helicase *(SMA1)","protein_coding"
"HORVU1Hr1G094870.2","No alias","Hordeum vulgare","chromatin remodeling factor *(Mot1) & TATA box-binding protein-associated factor *(MOT1)","protein_coding"
"HORVU1Hr1G095100.1","No alias","Hordeum vulgare","helicase UAP56","protein_coding"
"HORVU2Hr1G014660.2","No alias","Hordeum vulgare","RDR2-polymerase accessory protein *(CLSY1/2)","protein_coding"
"HORVU2Hr1G022450.1","No alias","Hordeum vulgare","component *(CHR5) of SAGA transcription co-activator complex & CHD1-type chromatin remodeling factor *(CHR5)","protein_coding"
"HORVU2Hr1G022490.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G024970.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G025750.2","No alias","Hordeum vulgare","chromatin remodeling factor *(Rad5)","protein_coding"
"HORVU2Hr1G025790.1","No alias","Hordeum vulgare","RNA helicase *(RCF1)","protein_coding"
"HORVU2Hr1G027290.10","No alias","Hordeum vulgare","chromatin remodeling factor *(SMARCAL1)","protein_coding"
"HORVU2Hr1G028060.16","No alias","Hordeum vulgare","RNA helicase component *(HEN2) of Nuclear Exosome Targeting (NEXT) activation complex","protein_coding"
"HORVU2Hr1G028120.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G030040.17","No alias","Hordeum vulgare","E3 ubiquitin ligase *(RBR-Helicase)","protein_coding"
"HORVU2Hr1G034200.5","No alias","Hordeum vulgare","chromatin remodeling factor *(SMARCAL1)","protein_coding"
"HORVU2Hr1G034330.2","No alias","Hordeum vulgare","component *(DRD1) of DNA methylation accessory complex","protein_coding"
"HORVU2Hr1G037590.3","No alias","Hordeum vulgare","chromatin remodeling factor *(ERCC6)","protein_coding"
"HORVU2Hr1G047010.2","No alias","Hordeum vulgare","chromatin remodeling factor *(Rad5-like)","protein_coding"
"HORVU2Hr1G047870.2","No alias","Hordeum vulgare","RNA helicase *(Prp16)","protein_coding"
"HORVU2Hr1G060640.3","No alias","Hordeum vulgare","group-II intron splicing RNA helicase *(PMH)","protein_coding"
"HORVU2Hr1G075870.37","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G084110.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G088270.21","No alias","Hordeum vulgare","endoribonuclease (DCL4) of transacting siRNA pathway","protein_coding"
"HORVU2Hr1G088480.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU2Hr1G127340.1","No alias","Hordeum vulgare","chromatin remodeling factor *(ERCC6)","protein_coding"
"HORVU3Hr1G002800.8","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G012850.1","No alias","Hordeum vulgare","ATPase component *(CHR11/CHR17) of ISWI chromatin remodeling complexes","protein_coding"
"HORVU3Hr1G014660.2","No alias","Hordeum vulgare","chromatin remodeling factor *(ERCC6) & DNA repair protein *(CSB/ERCC6)","protein_coding"
"HORVU3Hr1G018130.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G018170.3","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G018850.2","No alias","Hordeum vulgare","regulatory RNA helicase *(RH20/RH30) of virus replication","protein_coding"
"HORVU3Hr1G022710.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G024610.13","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G028550.27","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G035420.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G054100.8","No alias","Hordeum vulgare","regulatory protein *(CLSY3/4) of transacting siRNA pathway","protein_coding"
"HORVU3Hr1G054730.1","No alias","Hordeum vulgare","mRNA helicase *(RH31)","protein_coding"
"HORVU3Hr1G074660.7","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G092430.9","No alias","Hordeum vulgare","endoribonuclease *(DCL3)","protein_coding"
"HORVU3Hr1G092600.1","No alias","Hordeum vulgare","regulatory RNA helicase *(RH20/RH30) of virus replication","protein_coding"
"HORVU3Hr1G092610.1","No alias","Hordeum vulgare","regulatory RNA helicase *(RH20/RH30) of virus replication","protein_coding"
"HORVU3Hr1G107920.5","No alias","Hordeum vulgare","chromatin remodeling factor *(SHPRH)","protein_coding"
"HORVU3Hr1G114220.10","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G000640.1","No alias","Hordeum vulgare","regulatory RNA helicase *(RH27/RH51) of miRNA biogenesis pathway","protein_coding"
"HORVU4Hr1G007110.12","No alias","Hordeum vulgare","RNA helicase *(SMA1)","protein_coding"
"HORVU4Hr1G008870.18","No alias","Hordeum vulgare","chromatin remodeling factor *(DDM1)","protein_coding"
"HORVU4Hr1G009960.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G018990.2","No alias","Hordeum vulgare","RNA helicase component *(HEN2) of Nuclear Exosome Targeting (NEXT) activation complex","protein_coding"
"HORVU4Hr1G031280.1","No alias","Hordeum vulgare","sRNA cargo-loading helicase *(RH11/37) of extracellular vesicle trafficking","protein_coding"
"HORVU4Hr1G032190.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G046140.4","No alias","Hordeum vulgare","ATPase component *(Ino80) of chromatin remodelling complex","protein_coding"
"HORVU4Hr1G052730.3","No alias","Hordeum vulgare","RNA helicase Prp43 of Intron-Lariat Spliceosome complex","protein_coding"
"HORVU4Hr1G053550.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G053630.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G068170.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G072920.1","No alias","Hordeum vulgare","ATP-dependent helicase *(DBP5/LOS4)","protein_coding"
"HORVU4Hr1G074230.18","No alias","Hordeum vulgare","component *(DRD1) of DNA methylation accessory complex","protein_coding"
"HORVU4Hr1G082260.1","No alias","Hordeum vulgare","crosslink repair helicase *(HRQ1)","protein_coding"
"HORVU4Hr1G083970.6","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G084890.7","No alias","Hordeum vulgare","endoribonuclease component *(DCL1) of DCL1-HYL1 miRNA biogenesis complex","protein_coding"
"HORVU4Hr1G088270.14","No alias","Hordeum vulgare","RNA helicase *(Prp2)","protein_coding"
"HORVU4Hr1G088540.8","No alias","Hordeum vulgare","chromatin remodeling factor *(ALC1)","protein_coding"
"HORVU4Hr1G090840.3","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G010160.3","No alias","Hordeum vulgare","regulatory RNA helicase *(RH27/RH51) of miRNA biogenesis pathway","protein_coding"
"HORVU5Hr1G011460.1","No alias","Hordeum vulgare","group-II intron splicing RNA helicase *(PMH)","protein_coding"
"HORVU5Hr1G019300.8","No alias","Hordeum vulgare","endoribonuclease (DCL2) of transacting siRNA pathway","protein_coding"
"HORVU5Hr1G019730.1","No alias","Hordeum vulgare","E3 ubiquitin ligase *(RBR-Helicase)","protein_coding"
"HORVU5Hr1G037290.3","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G048040.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G059860.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G080170.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G085320.1","No alias","Hordeum vulgare","component *(DRD1) of DNA methylation accessory complex","protein_coding"
"HORVU5Hr1G093160.3","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G094990.5","No alias","Hordeum vulgare","group-I intron splicing RNA helicase *(ABO6)","protein_coding"
"HORVU5Hr1G109340.3","No alias","Hordeum vulgare","sRNA cargo-loading helicase *(RH11/37) of extracellular vesicle trafficking","protein_coding"
"HORVU6Hr1G004350.3","No alias","Hordeum vulgare","RNA helicase *(Brr2)","protein_coding"
"HORVU6Hr1G006050.1","No alias","Hordeum vulgare","SMARCA component *(SYD/BRM/MINU)","protein_coding"
"HORVU6Hr1G020570.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G020910.1","No alias","Hordeum vulgare","mRNA unwinding factor *(eIF4A))","protein_coding"
"HORVU6Hr1G021360.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G038030.5","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G059910.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G060630.1","No alias","Hordeum vulgare","DDX6-type mRNA helicase *(RH12/RH8)","protein_coding"
"HORVU6Hr1G061730.1","No alias","Hordeum vulgare","regulatory protein *(CLSY3/4) of transacting siRNA pathway","protein_coding"
"HORVU6Hr1G078680.2","No alias","Hordeum vulgare","chromatin remodeling factor *(RAD54)","protein_coding"
"HORVU6Hr1G085490.2","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU6Hr1G094560.1","No alias","Hordeum vulgare","helicase component *(eIF4A3) of RNA quality control Exon Junction complex","protein_coding"
"HORVU7Hr1G001080.1","No alias","Hordeum vulgare","RNA helicase component *(MTR4) of TRAMP nucleolar regulation complex","protein_coding"
"HORVU7Hr1G032080.3","No alias","Hordeum vulgare","RNA helicase *(Prp22)","protein_coding"
"HORVU7Hr1G041450.33","No alias","Hordeum vulgare","SMARCA component *(SYD/BRM/MINU)","protein_coding"
"HORVU7Hr1G043930.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G043960.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G073770.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G084210.2","No alias","Hordeum vulgare","sRNA cargo-loading helicase *(RH11/37) of extracellular vesicle trafficking","protein_coding"
"HORVU7Hr1G097070.1","No alias","Hordeum vulgare","RNA helicase *(Prp16)","protein_coding"
"Kfl00001_0660","kfl00001_0660_v1.1","Klebsormidium nitens","(at4g34910 : 463.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 35246 Blast hits to 34671 proteins in 2939 species: Archae - 524; Bacteria - 16250; Metazoa - 5646; Fungi - 4238; Plants - 2336; Viruses - 4; Other Eukaryotes - 6248 (source: NCBI BLink). & (p46942|db10_nicsy : 112.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 926.0) &  (original description: no original description)","protein_coding"
"Kfl00002_0180","kfl00002_0180_v1.1","Klebsormidium nitens","(at4g14790 : 531.0) encodes a nuclear-encoded DExH box RNA helicase, which is localized to mitochondria and whose in vitro ATPase activity is stimulated with mitochondrial RNA.; ATSUV3; CONTAINS InterPro DOMAIN/s: Mitochondrial degradasome RNA helicase subunit C-terminal (InterPro:IPR022192), DNA/RNA helicase, C-terminal (InterPro:IPR001650); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, mitochondrial, putative (TAIR:AT5G39840.1); Has 3666 Blast hits to 3643 proteins in 672 species: Archae - 20; Bacteria - 977; Metazoa - 276; Fungi - 353; Plants - 117; Viruses - 18; Other Eukaryotes - 1905 (source: NCBI BLink). & (reliability: 1062.0) &  (original description: no original description)","protein_coding"
"Kfl00004_0120","kfl00004_0120_v1.1","Klebsormidium nitens","(at3g20010 : 239.0) SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related; FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, ATP binding, nucleic acid binding; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related (TAIR:AT1G50410.1); Has 24758 Blast hits to 15202 proteins in 1867 species: Archae - 89; Bacteria - 7985; Metazoa - 5530; Fungi - 5269; Plants - 2318; Viruses - 151; Other Eukaryotes - 3416 (source: NCBI BLink). & (reliability: 478.0) &  (original description: no original description)","protein_coding"
"Kfl00004_0580","kfl00004_0580_v1.1","Klebsormidium nitens","(at2g13370 : 1061.0) chromatin remodeling 5 (CHR5); FUNCTIONS IN: chromatin binding, helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: chromatin assembly or disassembly; LOCATED IN: chromatin, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), Homeodomain-like (InterPro:IPR009057), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor CHD3 (PICKLE) (TAIR:AT2G25170.1); Has 38529 Blast hits to 28045 proteins in 2467 species: Archae - 189; Bacteria - 9973; Metazoa - 8887; Fungi - 6205; Plants - 2508; Viruses - 447; Other Eukaryotes - 10320 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 416.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 2122.0) &  (original description: no original description)","protein_coding"
"Kfl00005_0350","kfl00005_0350_v1.1","Klebsormidium nitens","(at1g05490 : 104.0) chromatin remodeling 31 (chr31); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling 40 (TAIR:AT3G24340.1); Has 38115 Blast hits to 26256 proteins in 2107 species: Archae - 207; Bacteria - 10267; Metazoa - 11226; Fungi - 5719; Plants - 1929; Viruses - 244; Other Eukaryotes - 8523 (source: NCBI BLink). & (reliability: 208.0) &  (original description: no original description)","protein_coding"
"Kfl00006_0450","kfl00006_0450_v1.1","Klebsormidium nitens","(at4g32700 : 81.6) Encodes a homolog of Drosophila MUS308 and mammalian DNA polymerase, which prevent spontaneous or DNA damage-induced production of DNA double strand breaks. Two conserved functional domains: an N-terminal superfamily II DNA/RNA helicase domain and a C-terminal prokaryotic-type DNA polymerase I domain. Required for regulated cell division and differentiation in meristems. Mutant plants show morphological defects, such as short roots, serrated leaves, and fasciation, as well as defective patterns of cell division and differentiation in the meristem. Mutant plants had 2.5 to 4.5-fold higher expression of ATGR1, ATBRCA1 and RAD51 genes. TEB is required for normal  progression of DNA replication and for correct expression of genes during development.; helicases;ATP-dependent helicases;nucleic acid binding;ATP binding;DNA-directed DNA polymerases;DNA binding; FUNCTIONS IN: in 6 functions; INVOLVED IN: regulation of gene expression, DNA replication, DNA recombination, photomorphogenesis; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA-directed DNA polymerase, family A, palm domain (InterPro:IPR001098), DNA/RNA helicase, C-terminal (InterPro:IPR001650), DNA polymerase A domain (InterPro:IPR002298), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase (TAIR:AT2G42270.1); Has 17628 Blast hits to 16579 proteins in 2941 species: Archae - 600; Bacteria - 7507; Metazoa - 1254; Fungi - 1190; Plants - 590; Viruses - 412; Other Eukaryotes - 6075 (source: NCBI BLink). & (reliability: 163.2) &  (original description: no original description)","protein_coding"
"Kfl00009_0450","kfl00009_0450_v1.1","Klebsormidium nitens","(at5g60990 : 499.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase 36 (TAIR:AT1G16280.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p46942|db10_nicsy : 189.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 998.0) &  (original description: no original description)","protein_coding"
"Kfl00010_0280","kfl00010_0280_v1.1","Klebsormidium nitens","(at3g06010 : 961.0) Encodes AtCHR12, a SNF2/Brahma-type chromatin-remodeling protein.  AtCHR12 mediates temporary growth arrest in Arabidopsis upon perceiving environmental stress.; ATCHR12; FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: response to water deprivation, response to salt stress, response to heat; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT5G19310.1); Has 23556 Blast hits to 19403 proteins in 2220 species: Archae - 141; Bacteria - 6122; Metazoa - 5759; Fungi - 4503; Plants - 1859; Viruses - 268; Other Eukaryotes - 4904 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 486.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1922.0) &  (original description: no original description)","protein_coding"
"Kfl00014_0100","kfl00014_0100_v1.1","Klebsormidium nitens","(p41380|if4a3_nicpl : 677.0) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at3g19760 : 670.0) Encodes an RNA helicase that may be a component of the Exon Junction Complex. Subcellular localization is modulated by stress. Under normal conditions it is localized to the nuceloplasm but under hyopoxic conditions it localizes to the nucleolus and splicing speckles.; eukaryotic initiation factor 4A-III (EIF4A-III); FUNCTIONS IN: protein binding, ATP-dependent helicase activity; INVOLVED IN: mRNA processing, response to hypoxia; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G51380.1); Has 50040 Blast hits to 49280 proteins in 3163 species: Archae - 836; Bacteria - 27183; Metazoa - 6400; Fungi - 4843; Plants - 2693; Viruses - 42; Other Eukaryotes - 8043 (source: NCBI BLink). & (reliability: 1340.0) &  (original description: no original description)","protein_coding"
"Kfl00017_0530","kfl00017_0530_v1.1","Klebsormidium nitens","(at2g35920 : 694.0) RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G04895.1); Has 15667 Blast hits to 10761 proteins in 1709 species: Archae - 0; Bacteria - 5024; Metazoa - 4470; Fungi - 1848; Plants - 1329; Viruses - 777; Other Eukaryotes - 2219 (source: NCBI BLink). & (reliability: 1320.0) &  (original description: no original description)","protein_coding"
"Kfl00020_0480","kfl00020_0480_v1.1","Klebsormidium nitens","(at3g26560 : 1414.0) ATP-dependent RNA helicase, putative; FUNCTIONS IN: in 6 functions; LOCATED IN: cytosol, mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Domain of unknown function DUF1605 (InterPro:IPR011709), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase family protein (TAIR:AT1G32490.2); Has 53052 Blast hits to 35825 proteins in 3176 species: Archae - 195; Bacteria - 13845; Metazoa - 17201; Fungi - 5520; Plants - 3365; Viruses - 1203; Other Eukaryotes - 11723 (source: NCBI BLink). & (reliability: 2828.0) &  (original description: no original description)","protein_coding"
"Kfl00020_0660","kfl00020_0660_v1.1","Klebsormidium nitens","(at2g40700 : 447.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G65900.1); Has 40440 Blast hits to 37904 proteins in 2977 species: Archae - 739; Bacteria - 19708; Metazoa - 6217; Fungi - 4486; Plants - 2481; Viruses - 5; Other Eukaryotes - 6804 (source: NCBI BLink). & (p46942|db10_nicsy : 97.4) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 894.0) &  (original description: no original description)","protein_coding"
"Kfl00023_0310","kfl00023_0310_v1.1","Klebsormidium nitens","(at3g09720 : 521.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, nucleic acid binding, ATP binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 47831 Blast hits to 47082 proteins in 3124 species: Archae - 967; Bacteria - 25249; Metazoa - 6167; Fungi - 4801; Plants - 2681; Viruses - 34; Other Eukaryotes - 7932 (source: NCBI BLink). & (p46942|db10_nicsy : 212.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1042.0) &  (original description: no original description)","protein_coding"
"Kfl00024_0400","kfl00024_0400_v1.1","Klebsormidium nitens","(at1g02670 : 166.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; INVOLVED IN: DNA repair; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Helicase protein with RING/U-box domain (TAIR:AT1G05120.1); Has 20658 Blast hits to 14879 proteins in 1788 species: Archae - 141; Bacteria - 6646; Metazoa - 3824; Fungi - 4666; Plants - 1875; Viruses - 121; Other Eukaryotes - 3385 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 149.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 332.0) &  (original description: no original description)","protein_coding"
"Kfl00028_0300","kfl00028_0300_v1.1","Klebsormidium nitens","(at1g12770 : 370.0) Encodes a DEAD-box RNA helicase that  localizes to mitochondria and is essential for regulating cell-to-cell transport via plasmodesmata.; embryo defective 1586 (EMB1586); FUNCTIONS IN: RNA helicase activity; INVOLVED IN: plasmodesma organization, plasmodesmata-mediated intercellular transport, embryo development ending in seed dormancy; LOCATED IN: mitochondrion; EXPRESSED IN: embryo, root, flower, shoot meristem; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 38833 Blast hits to 38121 proteins in 2993 species: Archae - 753; Bacteria - 18819; Metazoa - 5837; Fungi - 4441; Plants - 2445; Viruses - 12; Other Eukaryotes - 6526 (source: NCBI BLink). & (p41380|if4a3_nicpl : 139.0) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 740.0) &  (original description: no original description)","protein_coding"
"Kfl00030_0270","kfl00030_0270_v1.1","Klebsormidium nitens","(at5g66750 : 640.0) Protein is similar to SWI2/SNF2 chromatin remodeling proteins. DDM1 is appears to act as a chromatin-remodeling ATPase involved in cytosine methylation in CG and non-CG contexts. Involved in gene silencing and maintenance of DNA methylation and histone methylation. Hypomethylation of many genomic regions occurs in ddm1 mutants, and can cause several phenotypic abnormalities, but some loci, such as BONSAI (At1g73177) can be hypermethylated in ddm1 mutants after several generations, leading to different phenotypes. DDM1 might be involved in establishing a heterochromain boundary. A line expressing an RNAi targeted against DDM1  shows some resistance to agrobacterium-mediated root transformation.; chromatin remodeling 1 (CHR1); FUNCTIONS IN: helicase activity, ATPase activity; INVOLVED IN: methylation-dependent chromatin silencing, DNA mediated transformation, transposition, RNA-mediated; LOCATED IN: nucleosome; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor17 (TAIR:AT5G18620.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 439.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1280.0) &  (original description: no original description)","protein_coding"
"Kfl00036_g44","kfl00036_g44_v1.1","Klebsormidium nitens","(at2g01440 : 464.0) DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: ATP-dependent DNA helicase activity, helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: DNA repair, DNA recombination; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), DNA helicase, ATP-dependent, RecG (InterPro:IPR004609), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box helicase, putative (TAIR:AT3G02060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 928.0) &  (original description: no original description)","protein_coding"
"Kfl00037_0230","kfl00037_0230_v1.1","Klebsormidium nitens","(at2g33730 : 806.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G28180.1); Has 125674 Blast hits to 72393 proteins in 3317 species: Archae - 1039; Bacteria - 55089; Metazoa - 31149; Fungi - 11223; Plants - 5926; Viruses - 327; Other Eukaryotes - 20921 (source: NCBI BLink). & (p46942|db10_nicsy : 283.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1612.0) &  (original description: no original description)","protein_coding"
"Kfl00039_0290","kfl00039_0290_v1.1","Klebsormidium nitens","(at3g19210 : 410.0) Encodes RAD54, a member of the SWI2/SNF2 family of DNA-stimulated ATPases.  Functions in DNA repair via homologous recombination.; homolog of RAD54 (RAD54); FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: DNA repair, response to gamma radiation, double-strand break repair via homologous recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: style (sensu Poaceae), hydathode, root, petiole; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: switch 2 (TAIR:AT1G03750.1). & (q7g8y3|isw2_orysa : 187.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 820.0) &  (original description: no original description)","protein_coding"
"Kfl00045_0020","kfl00045_0020_v1.1","Klebsormidium nitens","(at2g25170 : 947.0) Encodes a SWI/SWF nuclear-localized chromatin remodeling factor of the CHD3 group. Involved in post-germination repression of embryonic development. Acts with GA to establish repression of embryonic genes upon germination. Protein preferentially accumulates in differentiating tissues. Loss of function alleles are associated with expression of embryonic traits in adult plants and derepression of embryonic genes such as PHEROS1.  Is an extragenic suppressor of slr2 (SSL2).  Mutations in PKL (SSL2) restores lateral root formation in the slr2 mutant slr-1.  It was proposed that PKL/SSL2-mediated chromatin remodeling negatively regulates auxin-mediated LR formation in Arabidopsis.; PICKLE (PKL); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1087 (InterPro:IPR009463), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Protein of unknown function DUF1086 (InterPro:IPR009462), Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor, putative (TAIR:AT4G31900.1); Has 20234 Blast hits to 17178 proteins in 1958 species: Archae - 161; Bacteria - 5176; Metazoa - 5098; Fungi - 4334; Plants - 1876; Viruses - 134; Other Eukaryotes - 3455 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 443.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1894.0) &  (original description: no original description)","protein_coding"
"Kfl00046_0110","kfl00046_0110_v1.1","Klebsormidium nitens","(at1g48310 : 451.0) chromatin remodeling factor18 (CHR18); FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein (TAIR:AT5G07810.1); Has 16435 Blast hits to 14312 proteins in 1741 species: Archae - 101; Bacteria - 4551; Metazoa - 3441; Fungi - 3785; Plants - 1315; Viruses - 143; Other Eukaryotes - 3099 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 120.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 902.0) &  (original description: no original description)","protein_coding"
"Kfl00050_0180","kfl00050_0180_v1.1","Klebsormidium nitens","(at1g27880 : 512.0) DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: DNA recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box RNA helicase family protein  (TAIR:AT4G35740.1); Has 41244 Blast hits to 39032 proteins in 2984 species: Archae - 762; Bacteria - 21282; Metazoa - 5401; Fungi - 4173; Plants - 3671; Viruses - 588; Other Eukaryotes - 5367 (source: NCBI BLink). & (reliability: 1024.0) &  (original description: no original description)","protein_coding"
"Kfl00055_0090","kfl00055_0090_v1.1","Klebsormidium nitens","(q7g8y3|isw2_orysa : 1337.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (at5g18620 : 1335.0) chromatin remodeling factor17 (CHR17); FUNCTIONS IN: in 7 functions; INVOLVED IN: ATP-dependent chromatin remodeling, chromatin remodeling; LOCATED IN: nucleus, chromatin remodeling complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, nucleosome remodelling ISWI, HAND domain (InterPro:IPR015194), SANT, eukarya (InterPro:IPR017884), SNF2-related (InterPro:IPR000330), SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), SLIDE (InterPro:IPR015195), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: chromatin-remodeling protein 11 (TAIR:AT3G06400.2); Has 25193 Blast hits to 20371 proteins in 2196 species: Archae - 142; Bacteria - 5974; Metazoa - 6066; Fungi - 4943; Plants - 1903; Viruses - 481; Other Eukaryotes - 5684 (source: NCBI BLink). & (reliability: 2670.0) &  (original description: no original description)","protein_coding"
"Kfl00056_0130","kfl00056_0130_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00058_0320","kfl00058_0320_v1.1","Klebsormidium nitens","(at5g07810 : 429.0) SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein; FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding, endonuclease activity; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), HNH endonuclease (InterPro:IPR002711), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor18 (TAIR:AT1G48310.1); Has 16904 Blast hits to 14939 proteins in 1977 species: Archae - 110; Bacteria - 5677; Metazoa - 3556; Fungi - 3371; Plants - 1315; Viruses - 123; Other Eukaryotes - 2752 (source: NCBI BLink). & (reliability: 858.0) &  (original description: no original description)","protein_coding"
"Kfl00058_0395","kfl00058_0395_v1.1","Klebsormidium nitens","(at5g07810 : 173.0) SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein; FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding, endonuclease activity; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), HNH endonuclease (InterPro:IPR002711), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor18 (TAIR:AT1G48310.1); Has 16904 Blast hits to 14939 proteins in 1977 species: Archae - 110; Bacteria - 5677; Metazoa - 3556; Fungi - 3371; Plants - 1315; Viruses - 123; Other Eukaryotes - 2752 (source: NCBI BLink). & (reliability: 346.0) &  (original description: no original description)","protein_coding"
"Kfl00061_0200","kfl00061_0200_v1.1","Klebsormidium nitens","(at4g15850 : 455.0) plant DEAD box-like RNA helicase.; RNA helicase 1 (RH1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT4G16630.1); Has 38711 Blast hits to 38056 proteins in 2969 species: Archae - 603; Bacteria - 19125; Metazoa - 5736; Fungi - 4393; Plants - 2535; Viruses - 13; Other Eukaryotes - 6306 (source: NCBI BLink). & (q41382|rh7_spiol : 100.0) DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) & (reliability: 910.0) &  (original description: no original description)","protein_coding"
"Kfl00068_0200","kfl00068_0200_v1.1","Klebsormidium nitens","(at2g40770 : 475.0) zinc ion binding;DNA binding;helicases;ATP binding;nucleic acid binding; FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, nucleic acid binding, ATP binding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), SNF2-related (InterPro:IPR000330), DEAD-like helicase, N-terminal (InterPro:IPR014001), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related (TAIR:AT1G61140.1); Has 20880 Blast hits to 12947 proteins in 1504 species: Archae - 88; Bacteria - 5732; Metazoa - 4955; Fungi - 5171; Plants - 2134; Viruses - 115; Other Eukaryotes - 2685 (source: NCBI BLink). & (reliability: 950.0) &  (original description: no original description)","protein_coding"
"Kfl00069_0180","kfl00069_0180_v1.1","Klebsormidium nitens","(at1g03750 : 654.0) switch 2 (SWI2); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: homolog of RAD54 (TAIR:AT3G19210.1); Has 20033 Blast hits to 14398 proteins in 1655 species: Archae - 120; Bacteria - 5954; Metazoa - 4199; Fungi - 4321; Plants - 1927; Viruses - 177; Other Eukaryotes - 3335 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 211.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1308.0) &  (original description: no original description)","protein_coding"
"Kfl00070_0090","kfl00070_0090_v1.1","Klebsormidium nitens","(at1g55150 : 163.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 46818 Blast hits to 45969 proteins in 3127 species: Archae - 940; Bacteria - 23848; Metazoa - 6439; Fungi - 4774; Plants - 2718; Viruses - 21; Other Eukaryotes - 8078 (source: NCBI BLink). & (p46942|db10_nicsy : 119.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 326.0) &  (original description: no original description)","protein_coding"
"Kfl00077_0280","kfl00077_0280_v1.1","Klebsormidium nitens","(at1g27900 : 717.0) RNA helicase family protein; FUNCTIONS IN: in 7 functions; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), ATPase, AAA+ type, core (InterPro:IPR003593), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, putative (TAIR:AT3G26560.1); Has 10760 Blast hits to 9882 proteins in 1732 species: Archae - 26; Bacteria - 3503; Metazoa - 2392; Fungi - 1270; Plants - 841; Viruses - 1056; Other Eukaryotes - 1672 (source: NCBI BLink). & (reliability: 1434.0) &  (original description: no original description)","protein_coding"
"Kfl00080_0110","kfl00080_0110_v1.1","Klebsormidium nitens","(at1g31360 : 693.0) Encodes a (d)NTP-dependent 3'->5' DNA helicase. This protein can also disrupt D loop structures and may mediate branch migration of Holliday junctions when tested in vitro. The unwinding activity of the enzyme depends on the presence of divalent cations (Mg2+, Mn2+, or Ca2+, but not Zn2+).(d)NTPs are also required with ATP and dATP supporting the greatest amount of DNA unwinding in vitro.; RECQ helicase L2 (RECQL2); CONTAINS InterPro DOMAIN/s: RQC domain (InterPro:IPR018982), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Helicase/RNase D C-terminal, HRDC domain (InterPro:IPR002121); BEST Arabidopsis thaliana protein match is: DNA helicase (RECQl4A) (TAIR:AT1G10930.1); Has 27972 Blast hits to 27909 proteins in 2839 species: Archae - 320; Bacteria - 17784; Metazoa - 2771; Fungi - 1804; Plants - 1361; Viruses - 12; Other Eukaryotes - 3920 (source: NCBI BLink). & (reliability: 1386.0) &  (original description: no original description)","protein_coding"
"Kfl00083_0290","kfl00083_0290_v1.1","Klebsormidium nitens","(at4g16630 : 610.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 91788 Blast hits to 67613 proteins in 3461 species: Archae - 858; Bacteria - 34733; Metazoa - 21444; Fungi - 9002; Plants - 4280; Viruses - 615; Other Eukaryotes - 20856 (source: NCBI BLink). & (p46942|db10_nicsy : 201.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1220.0) &  (original description: no original description)","protein_coding"
"Kfl00085_0100","kfl00085_0100_v1.1","Klebsormidium nitens","(at1g32490 : 1214.0) Encodes a homolog of the yeast PRP2 protein, one of four related DEAH RNA helicases identified as essential cofactors for RNA splicing.; ENHANCED SILENCING PHENOTYPE 3 (ESP3); FUNCTIONS IN: helicase activity, ATP-dependent RNA helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; INVOLVED IN: RNA splicing, posttranscriptional gene silencing by RNA, embryo development ending in seed dormancy; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: helicase domain-containing protein (TAIR:AT2G35340.1). & (reliability: 2428.0) &  (original description: no original description)","protein_coding"
"Kfl00086_0370","kfl00086_0370_v1.1","Klebsormidium nitens","(at3g05740 : 520.0) RECQ helicase l1 (RECQI1); FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: DNA recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DNA helicase (RECQl4A) (TAIR:AT1G10930.1); Has 22913 Blast hits to 22836 proteins in 2673 species: Archae - 358; Bacteria - 13443; Metazoa - 2936; Fungi - 2132; Plants - 1261; Viruses - 9; Other Eukaryotes - 2774 (source: NCBI BLink). & (reliability: 1040.0) &  (original description: no original description)","protein_coding"
"Kfl00088_0100","kfl00088_0100_v1.1","Klebsormidium nitens","(at4g09730 : 387.0) Encodes RH39, a DEAD-box protein involved in the introduction of the hidden break into the 23S rRNA in the chloroplasts. Recombinant RH39 binds to the 23S rRNA in a segment adjacent to the stem-loop creating the hidden break target loop in a sequence-dependent manner. Has ATP-hydrolyzing activity at a Kcat of 5.3 /min in the presence of rRNA sequence. Mutants have drastically reduced level of level of ribulose 1,5-bisphosphate carboxylase/oxygenase.; RH39 (RH39); FUNCTIONS IN: LSU rRNA binding, ATPase activity, ATP-dependent helicase activity; INVOLVED IN: chloroplast ribulose bisphosphate carboxylase complex biogenesis, chloroplast rRNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT3G06980.1); Has 40425 Blast hits to 39698 proteins in 3032 species: Archae - 675; Bacteria - 19989; Metazoa - 5933; Fungi - 4498; Plants - 2407; Viruses - 9; Other Eukaryotes - 6914 (source: NCBI BLink). & (p46942|db10_nicsy : 152.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 774.0) &  (original description: no original description)","protein_coding"
"Kfl00094_0050","kfl00094_0050_v1.1","Klebsormidium nitens","(at3g02060 : 602.0) DEAD/DEAH box helicase, putative; FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA repair, regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Transcription-repair-coupling factor (InterPro:IPR005118), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Transcription factor CarD (InterPro:IPR003711), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box RNA helicase family protein  (TAIR:AT2G01440.1); Has 31156 Blast hits to 30938 proteins in 2896 species: Archae - 262; Bacteria - 19852; Metazoa - 1548; Fungi - 988; Plants - 649; Viruses - 13; Other Eukaryotes - 7844 (source: NCBI BLink). & (reliability: 1204.0) &  (original description: no original description)","protein_coding"
"Kfl00102_0100","kfl00102_0100_v1.1","Klebsormidium nitens","(at1g20960 : 2806.0) embryo defective 1507 (emb1507); FUNCTIONS IN: in 6 functions; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Sec63 domain (InterPro:IPR004179), Sec63 domain, subgroup (InterPro:IPR018127), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase (TAIR:AT2G42270.1). & (reliability: 5612.0) &  (original description: no original description)","protein_coding"
"Kfl00102_0230","kfl00102_0230_v1.1","Klebsormidium nitens","(at1g35530 : 555.0) DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: in 6 functions; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G36020.1). & (reliability: 1110.0) &  (original description: no original description)","protein_coding"
"Kfl00105_0280","kfl00105_0280_v1.1","Klebsormidium nitens","(at3g53110 : 462.0) Encodes a putative DEAD-Box RNA Helicase and has RNA-dependent ATPase activity. Mutant is Sensitive to chilling stress and heat stress. Germination of the mutant is inhibited by ABA. LOS4 may be involved in temperature sensing. Is enriched in the nuclear envelope and also located in the cytoplasm. LOS4 is involved in export of poly A RNA.; LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 4 (LOS4); FUNCTIONS IN: RNA helicase activity, RNA-dependent ATPase activity, ATP-dependent helicase activity; INVOLVED IN: poly(A)+ mRNA export from nucleus, response to cold, response to heat, response to abscisic acid stimulus; LOCATED IN: nuclear envelope, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eukaryotic initiation factor 4A-III (TAIR:AT3G19760.1); Has 40925 Blast hits to 40635 proteins in 3033 species: Archae - 702; Bacteria - 21081; Metazoa - 5720; Fungi - 4311; Plants - 2419; Viruses - 28; Other Eukaryotes - 6664 (source: NCBI BLink). & (q41741|if4a_maize : 217.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Zea mays (Maize) & (reliability: 924.0) &  (original description: no original description)","protein_coding"
"Kfl00112_0020","kfl00112_0020_v1.1","Klebsormidium nitens","(at1g61140 : 583.0) embryo sac development arrest 16 (EDA16); FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, ATP binding, nucleic acid binding; INVOLVED IN: embryo sac development; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related (TAIR:AT1G11100.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 98.6) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1166.0) &  (original description: no original description)","protein_coding"
"Kfl00121_0010","kfl00121_0010_v1.1","Klebsormidium nitens","(at3g16840 : 451.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 60083 Blast hits to 51461 proteins in 3186 species: Archae - 589; Bacteria - 20345; Metazoa - 13239; Fungi - 7387; Plants - 3446; Viruses - 273; Other Eukaryotes - 14804 (source: NCBI BLink). & (q41382|rh7_spiol : 141.0) DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) & (reliability: 902.0) &  (original description: no original description)","protein_coding"
"Kfl00121_0050","kfl00121_0050_v1.1","Klebsormidium nitens","(at5g54910 : 607.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G65900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p46942|db10_nicsy : 182.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1214.0) &  (original description: no original description)","protein_coding"
"Kfl00122_0030","kfl00122_0030_v1.1","Klebsormidium nitens","(at1g31970 : 516.0) STRESS RESPONSE SUPPRESSOR 1 (STRS1); FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 53114 Blast hits to 49629 proteins in 3238 species: Archae - 911; Bacteria - 25415; Metazoa - 8113; Fungi - 5284; Plants - 3075; Viruses - 103; Other Eukaryotes - 10213 (source: NCBI BLink). & (p46942|db10_nicsy : 349.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1032.0) &  (original description: no original description)","protein_coding"
"Kfl00125_0020","kfl00125_0020_v1.1","Klebsormidium nitens","(at2g13370 : 403.0) chromatin remodeling 5 (CHR5); FUNCTIONS IN: chromatin binding, helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: chromatin assembly or disassembly; LOCATED IN: chromatin, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), Homeodomain-like (InterPro:IPR009057), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor CHD3 (PICKLE) (TAIR:AT2G25170.1); Has 38529 Blast hits to 28045 proteins in 2467 species: Archae - 189; Bacteria - 9973; Metazoa - 8887; Fungi - 6205; Plants - 2508; Viruses - 447; Other Eukaryotes - 10320 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 384.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 776.0) &  (original description: no original description)","protein_coding"
"Kfl00127_0155","kfl00127_0155_v1.1","Klebsormidium nitens","(at2g30800 : 941.0) Has RNA or DNA helicase activity and expressed specifically in tapetum and vascular tissue. First identified member of a new group of the mle helicase group of the DEAH family.; helicase in vascular tissue and tapetum (HVT1); CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), Ankyrin repeat-containing domain (InterPro:IPR020683), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Single-stranded nucleic acid binding R3H (InterPro:IPR001374), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: nuclear DEIH-boxhelicase (TAIR:AT1G06670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1736.0) &  (original description: no original description)","protein_coding"
"Kfl00129_0030","kfl00129_0030_v1.1","Klebsormidium nitens","(at1g59990 : 167.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G40700.1); Has 57869 Blast hits to 34290 proteins in 2955 species: Archae - 517; Bacteria - 30307; Metazoa - 8550; Fungi - 6961; Plants - 3872; Viruses - 6; Other Eukaryotes - 7656 (source: NCBI BLink). & (reliability: 334.0) &  (original description: no original description)","protein_coding"
"Kfl00130_0050","kfl00130_0050_v1.1","Klebsormidium nitens","(at3g57300 : 966.0) Encodes the Arabidopsis INO80 ortholog of the SWI/SNF ATPase family.  Functions as a positive regulator of DNA homologous recombination (HR).  In INO80 mutants, the HR frequency is reduced to 15% of that in the wild-type.  Mutation in INO80 does not affect sensitivity to genotoxic agents and efficiency of T-DNA integration.  INO80 was also shown to regulate a subset of the Arabidopsis transcriptome.; INO80 ortholog (INO80); FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: somatic cell DNA recombination, positive regulation of DNA repair, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA binding domain, INO80 (InterPro:IPR020838), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein (TAIR:AT3G12810.1). & (q7g8y3|isw2_orysa : 274.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1932.0) &  (original description: no original description)","protein_coding"
"Kfl00133_0140","kfl00133_0140_v1.1","Klebsormidium nitens","(at3g62310 : 1153.0) RNA helicase family protein; FUNCTIONS IN: RNA helicase activity, helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase family protein (TAIR:AT2G47250.1); Has 10517 Blast hits to 9531 proteins in 1639 species: Archae - 4; Bacteria - 3473; Metazoa - 2472; Fungi - 1291; Plants - 883; Viruses - 640; Other Eukaryotes - 1754 (source: NCBI BLink). & (reliability: 2306.0) &  (original description: no original description)","protein_coding"
"Kfl00147_0050","kfl00147_0050_v1.1","Klebsormidium nitens","(at1g08600 : 369.0) ATRX; FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: homolog of RAD54 (TAIR:AT3G19210.1). & (gnl|cdd|68872 : 195.0) no description available & (q7g8y3|isw2_orysa : 102.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (gnl|cdd|39774 : 94.4) no description available & (reliability: 738.0) &  (original description: no original description)","protein_coding"
"Kfl00148_0240","kfl00148_0240_v1.1","Klebsormidium nitens","(at5g63950 : 571.0) chromatin remodeling 24 (CHR24); FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling 8 (TAIR:AT2G18760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 217.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1142.0) &  (original description: no original description)","protein_coding"
"Kfl00148_0270","kfl00148_0270_v1.1","Klebsormidium nitens","(at2g46020 : 1119.0) Encodes a SWI/SNF chromatin remodeling ATPase that upregulates transcription of all three CUC genes and is involved in the formation and/or maintenance of boundary cells during embryogenesis. Also mediates repression of expression of seed storage proteins in vegetative tissues. Interacts strongly with AtSWI3C, also with AtSWI3B, but not with AtSWI3A or AtSWI3D.; BRAHMA (BRM); FUNCTIONS IN: helicase activity, transcription regulator activity, DNA binding, ATP binding; INVOLVED IN: ATP-dependent chromatin remodeling, organ boundary specification between lateral organs and the meristem, regulation of gene expression, epigenetic; LOCATED IN: cytosol, nucleus, chromatin remodeling complex; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Bromodomain (InterPro:IPR001487), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G28290.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 365.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 2238.0) &  (original description: no original description)","protein_coding"
"Kfl00152_0230","kfl00152_0230_v1.1","Klebsormidium nitens","(at1g55150 : 309.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 46818 Blast hits to 45969 proteins in 3127 species: Archae - 940; Bacteria - 23848; Metazoa - 6439; Fungi - 4774; Plants - 2718; Viruses - 21; Other Eukaryotes - 8078 (source: NCBI BLink). & (p46942|db10_nicsy : 262.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 582.0) &  (original description: no original description)","protein_coding"
"Kfl00154_0160","kfl00154_0160_v1.1","Klebsormidium nitens","(at5g08610 : 471.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G08620.1); Has 49840 Blast hits to 44437 proteins in 3094 species: Archae - 842; Bacteria - 25196; Metazoa - 7587; Fungi - 5309; Plants - 2787; Viruses - 50; Other Eukaryotes - 8069 (source: NCBI BLink). & (p46942|db10_nicsy : 194.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 942.0) &  (original description: no original description)","protein_coding"
"Kfl00155_0200","kfl00155_0200_v1.1","Klebsormidium nitens","(at5g22750 : 149.0) DNA repair gene. gamma-radiation hypersensitive (RAD5) involved in stable transformation and T-DNA transfer; RAD5; FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA mediated transformation; EXPRESSED IN: embryo, sperm cell, seed; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), HIP116, Rad5p N-terminal (InterPro:IPR014905), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Helicase protein with RING/U-box domain (TAIR:AT5G43530.1); Has 27107 Blast hits to 18179 proteins in 1771 species: Archae - 108; Bacteria - 7266; Metazoa - 8140; Fungi - 5089; Plants - 2446; Viruses - 173; Other Eukaryotes - 3885 (source: NCBI BLink). & (reliability: 284.0) &  (original description: no original description)","protein_coding"
"Kfl00158_0080","kfl00158_0080_v1.1","Klebsormidium nitens","(at5g62190 : 590.0) DEAD/DEAH box RNA helicase PRH75; PRH75; FUNCTIONS IN: DEAD/H-box RNA helicase binding, ATP-dependent helicase activity; INVOLVED IN: RNA metabolic process; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), GUCT (InterPro:IPR012562), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase (RH3) (TAIR:AT5G26742.2); Has 57587 Blast hits to 49572 proteins in 3210 species: Archae - 795; Bacteria - 24538; Metazoa - 10953; Fungi - 6002; Plants - 4052; Viruses - 90; Other Eukaryotes - 11157 (source: NCBI BLink). & (q41382|rh7_spiol : 567.0) DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) & (reliability: 1180.0) &  (original description: no original description)","protein_coding"
"Kfl00160_0200","kfl00160_0200_v1.1","Klebsormidium nitens","(at2g06990 : 1082.0) encodes a putative DExH-box RNA helicase that acts redundantly with HEN1, HUA1, and HUA2 in the specification of floral organ identity in the third whorl.; hua enhancer 2 (HEN2); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DSH, C-terminal (InterPro:IPR012961), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), RNA helicase, ATP-dependent, SK12/DOB1 (InterPro:IPR016438), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase, ATP-dependent, SK12/DOB1 protein (TAIR:AT1G59760.1); Has 9841 Blast hits to 8173 proteins in 1240 species: Archae - 753; Bacteria - 3176; Metazoa - 1197; Fungi - 1159; Plants - 489; Viruses - 32; Other Eukaryotes - 3035 (source: NCBI BLink). & (reliability: 2164.0) &  (original description: no original description)","protein_coding"
"Kfl00173_0040","kfl00173_0040_v1.1","Klebsormidium nitens","(at1g55150 : 686.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 46818 Blast hits to 45969 proteins in 3127 species: Archae - 940; Bacteria - 23848; Metazoa - 6439; Fungi - 4774; Plants - 2718; Viruses - 21; Other Eukaryotes - 8078 (source: NCBI BLink). & (p46942|db10_nicsy : 436.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1372.0) &  (original description: no original description)","protein_coding"
"Kfl00186_0200","kfl00186_0200_v1.1","Klebsormidium nitens","(at1g58060 : 889.0) RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase family protein (TAIR:AT1G58050.1); Has 14563 Blast hits to 8989 proteins in 1532 species: Archae - 4; Bacteria - 6119; Metazoa - 3212; Fungi - 1916; Plants - 1040; Viruses - 151; Other Eukaryotes - 2121 (source: NCBI BLink). & (reliability: 1778.0) &  (original description: no original description)","protein_coding"
"Kfl00189_0140","kfl00189_0140_v1.1","Klebsormidium nitens","(at3g01540 : 471.0) RNA HELICASE DRH1; DEAD box RNA helicase 1 (DRH1); FUNCTIONS IN: ATPase activity, ATP-dependent RNA helicase activity; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), WW/Rsp5/WWP (InterPro:IPR001202), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase family protein (TAIR:AT5G14610.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p46942|db10_nicsy : 462.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 942.0) &  (original description: no original description)","protein_coding"
"Kfl00200_0040","kfl00200_0040_v1.1","Klebsormidium nitens","(at5g22750 : 253.0) DNA repair gene. gamma-radiation hypersensitive (RAD5) involved in stable transformation and T-DNA transfer; RAD5; FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA mediated transformation; EXPRESSED IN: embryo, sperm cell, seed; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), HIP116, Rad5p N-terminal (InterPro:IPR014905), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Helicase protein with RING/U-box domain (TAIR:AT5G43530.1); Has 27107 Blast hits to 18179 proteins in 1771 species: Archae - 108; Bacteria - 7266; Metazoa - 8140; Fungi - 5089; Plants - 2446; Viruses - 173; Other Eukaryotes - 3885 (source: NCBI BLink). & (reliability: 468.0) &  (original description: no original description)","protein_coding"
"Kfl00203_0160","kfl00203_0160_v1.1","Klebsormidium nitens","(at1g10930 : 726.0) DNA helicase involved in the maintenance of genome stability by modulation of the DNA damage response and suppression of homologous recombination.; RECQ4A; FUNCTIONS IN: helicase activity, ATP-dependent 3'-5' DNA helicase activity, ATP-dependent helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: chromosome organization, response to DNA damage stimulus, double-strand break repair via homologous recombination; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RQC domain (InterPro:IPR018982), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Helicase/RNase D C-terminal, HRDC domain (InterPro:IPR002121); BEST Arabidopsis thaliana protein match is: RECQ helicase L4B (TAIR:AT1G60930.1); Has 34923 Blast hits to 34782 proteins in 2821 species: Archae - 633; Bacteria - 21324; Metazoa - 3687; Fungi - 2728; Plants - 1606; Viruses - 18; Other Eukaryotes - 4927 (source: NCBI BLink). & (reliability: 1452.0) &  (original description: no original description)","protein_coding"
"Kfl00210_0080","kfl00210_0080_v1.1","Klebsormidium nitens","(at5g11170 : 652.0) DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; INVOLVED IN: response to cadmium ion; LOCATED IN: nucleolus; EXPRESSED IN: guard cell, root, cultured cell; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box RNA helicase family protein  (TAIR:AT5G11200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p35683|if4a_orysa : 225.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Oryza sativa (Rice) & (reliability: 1304.0) &  (original description: no original description)","protein_coding"
"Kfl00210_0140","kfl00210_0140_v1.1","Klebsormidium nitens","(at3g12810 : 1028.0) Encodes a protein similar to ATP-dependent, chromatin-remodeling proteins of the ISWI and SWI2/SNF2 family. Genetic analyses suggest that this gene is involved in multiple flowering pathways. Mutations in PIE1 results in suppression of FLC-mediated delay of flowering and causes early flowering in noninductive photoperiods independently of FLC. PIE1 is required for expression of FLC in the shoot apex but not in the root.Along with ARP6 forms a complex to deposit modified histone H2A.Z at several loci within the genome. This modification alters the expression of the target genes (i.e. FLC, MAF4, MAF6).; PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 (PIE1); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; INVOLVED IN: in 6 processes; LOCATED IN: SWI/SNF complex, cell wall, chromatin remodeling complex; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: HSA (InterPro:IPR006562), HAS subgroup (InterPro:IPR013999), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), SNF2-related (InterPro:IPR000330), MYB-like (InterPro:IPR017877), SANT, DNA-binding (InterPro:IPR001005), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: INO80 ortholog (TAIR:AT3G57300.1); Has 42311 Blast hits to 26312 proteins in 2357 species: Archae - 246; Bacteria - 10217; Metazoa - 11172; Fungi - 7336; Plants - 2916; Viruses - 500; Other Eukaryotes - 9924 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 293.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 2056.0) &  (original description: no original description)","protein_coding"
"Kfl00211_0150","kfl00211_0150_v1.1","Klebsormidium nitens","(at4g35740 : 530.0) Encodes RECQ3, an ATP-dependent helicase.; RecQl3; FUNCTIONS IN: ATP binding, ATP-dependent helicase activity; INVOLVED IN: DNA recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RECQ helicase L2 (TAIR:AT1G31360.1); Has 28158 Blast hits to 28089 proteins in 2765 species: Archae - 286; Bacteria - 16813; Metazoa - 3341; Fungi - 2669; Plants - 1491; Viruses - 10; Other Eukaryotes - 3548 (source: NCBI BLink). & (p46942|db10_nicsy : 80.9) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1060.0) &  (original description: no original description)","protein_coding"
"Kfl00219_0610","kfl00219_0610_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00223_0110","kfl00223_0110_v1.1","Klebsormidium nitens","(at2g44980 : 444.0) SNF2 domain-containing protein / helicase domain-containing protein; FUNCTIONS IN: transcription regulator activity, helicase activity, DNA binding, nucleic acid binding, ATP binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor17 (TAIR:AT5G18620.2); Has 17488 Blast hits to 15031 proteins in 1958 species: Archae - 101; Bacteria - 5047; Metazoa - 3666; Fungi - 3968; Plants - 1607; Viruses - 135; Other Eukaryotes - 2964 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 280.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 888.0) &  (original description: no original description)","protein_coding"
"Kfl00226_0050","kfl00226_0050_v1.1","Klebsormidium nitens","(at3g06980 : 357.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RH39 (TAIR:AT4G09730.1); Has 36871 Blast hits to 36254 proteins in 2997 species: Archae - 517; Bacteria - 17572; Metazoa - 5953; Fungi - 4324; Plants - 2343; Viruses - 14; Other Eukaryotes - 6148 (source: NCBI BLink). & (p46942|db10_nicsy : 89.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 714.0) &  (original description: no original description)","protein_coding"
"Kfl00259_0020","kfl00259_0020_v1.1","Klebsormidium nitens","(at3g01540 : 602.0) RNA HELICASE DRH1; DEAD box RNA helicase 1 (DRH1); FUNCTIONS IN: ATPase activity, ATP-dependent RNA helicase activity; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), WW/Rsp5/WWP (InterPro:IPR001202), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase family protein (TAIR:AT5G14610.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p46942|db10_nicsy : 602.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1204.0) &  (original description: no original description)","protein_coding"
"Kfl00264_0180","kfl00264_0180_v1.1","Klebsormidium nitens","(at1g59760 : 1027.0) RNA helicase, ATP-dependent, SK12/DOB1 protein; FUNCTIONS IN: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DSH, C-terminal (InterPro:IPR012961), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), RNA helicase, ATP-dependent, SK12/DOB1 (InterPro:IPR016438), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase, ATP-dependent, SK12/DOB1 protein (TAIR:AT2G06990.1); Has 9909 Blast hits to 8438 proteins in 1290 species: Archae - 828; Bacteria - 3072; Metazoa - 1170; Fungi - 1231; Plants - 476; Viruses - 32; Other Eukaryotes - 3100 (source: NCBI BLink). & (reliability: 2054.0) &  (original description: no original description)","protein_coding"
"Kfl00265_0060","kfl00265_0060_v1.1","Klebsormidium nitens","(at1g01040 : 525.0) Encodes a Dicer homolog. Dicer is a RNA helicase involved in microRNA processing. Mutations in this locus can result in embryo lethality. Embryo shape at seed maturity is globular-elongate. Other mutants convert the floral meristems to an indeterminate state, others yet show defects in ovule development. mRNA is expressed in all shoot tissues. DCL1 is able to produce miRNAs and siRNAs.; dicer-like 1 (DCL1); CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), Double-stranded RNA-binding (InterPro:IPR001159), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Ribonuclease III (InterPro:IPR000999), Double-stranded RNA-binding-like (InterPro:IPR014720), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Dicer double-stranded RNA-binding fold (InterPro:IPR005034), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: dicer-like 3 (TAIR:AT3G43920.1). & (reliability: 1050.0) &  (original description: no original description)","protein_coding"
"Kfl00265_0110","kfl00265_0110_v1.1","Klebsormidium nitens","(at5g39840 : 591.0) ATP-dependent RNA helicase, mitochondrial, putative; FUNCTIONS IN: helicase activity, ATP-dependent RNA helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial degradasome RNA helicase subunit C-terminal (InterPro:IPR022192), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, mitochondrial (SUV3) (TAIR:AT4G14790.1); Has 4068 Blast hits to 4044 proteins in 754 species: Archae - 43; Bacteria - 1236; Metazoa - 267; Fungi - 388; Plants - 157; Viruses - 16; Other Eukaryotes - 1961 (source: NCBI BLink). & (reliability: 1182.0) &  (original description: no original description)","protein_coding"
"Kfl00278_0040","kfl00278_0040_v1.1","Klebsormidium nitens","(at5g22750 : 995.0) DNA repair gene. gamma-radiation hypersensitive (RAD5) involved in stable transformation and T-DNA transfer; RAD5; FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA mediated transformation; EXPRESSED IN: embryo, sperm cell, seed; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), HIP116, Rad5p N-terminal (InterPro:IPR014905), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Helicase protein with RING/U-box domain (TAIR:AT5G43530.1); Has 27107 Blast hits to 18179 proteins in 1771 species: Archae - 108; Bacteria - 7266; Metazoa - 8140; Fungi - 5089; Plants - 2446; Viruses - 173; Other Eukaryotes - 3885 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 94.4) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1808.0) &  (original description: no original description)","protein_coding"
"Kfl00288_0140","kfl00288_0140_v1.1","Klebsormidium nitens","(at5g05130 : 600.0) DNA/RNA helicase protein; FUNCTIONS IN: in 6 functions; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), HIP116, Rad5p N-terminal (InterPro:IPR014905), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: DNA/RNA helicase protein (TAIR:AT5G22750.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 114.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1200.0) &  (original description: no original description)","protein_coding"
"Kfl00291_0150","kfl00291_0150_v1.1","Klebsormidium nitens","(at2g02090 : 634.0) ETL1; FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling 5 (TAIR:AT2G13370.1); Has 19948 Blast hits to 16374 proteins in 2059 species: Archae - 127; Bacteria - 6550; Metazoa - 3755; Fungi - 4012; Plants - 1782; Viruses - 219; Other Eukaryotes - 3503 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 317.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1268.0) &  (original description: no original description)","protein_coding"
"Kfl00310_0020","kfl00310_0020_v1.1","Klebsormidium nitens","(at1g48650 : 321.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: in 6 functions; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Double-stranded RNA-binding (InterPro:IPR001159), Domain of unknown function DUF1605 (InterPro:IPR011709), Double-stranded RNA-binding-like (InterPro:IPR014720), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G01130.1); Has 12982 Blast hits to 8882 proteins in 1499 species: Archae - 14; Bacteria - 5361; Metazoa - 2913; Fungi - 1651; Plants - 997; Viruses - 50; Other Eukaryotes - 1996 (source: NCBI BLink). & (reliability: 642.0) &  (original description: no original description)","protein_coding"
"Kfl00316_0020","kfl00316_0020_v1.1","Klebsormidium nitens","(at1g05120 : 616.0) Helicase protein with RING/U-box domain; FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G02670.1); Has 29218 Blast hits to 14448 proteins in 1607 species: Archae - 124; Bacteria - 8622; Metazoa - 6656; Fungi - 6694; Plants - 2674; Viruses - 189; Other Eukaryotes - 4259 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 101.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1232.0) &  (original description: no original description)","protein_coding"
"Kfl00316_0150","kfl00316_0150_v1.1","Klebsormidium nitens","(at5g13010 : 1240.0) embryo defective 3011 (EMB3011); FUNCTIONS IN: RNA helicase activity, helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, putative (TAIR:AT3G26560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 2480.0) &  (original description: no original description)","protein_coding"
"Kfl00327_0060","kfl00327_0060_v1.1","Klebsormidium nitens","(at4g32700 : 819.0) Encodes a homolog of Drosophila MUS308 and mammalian DNA polymerase, which prevent spontaneous or DNA damage-induced production of DNA double strand breaks. Two conserved functional domains: an N-terminal superfamily II DNA/RNA helicase domain and a C-terminal prokaryotic-type DNA polymerase I domain. Required for regulated cell division and differentiation in meristems. Mutant plants show morphological defects, such as short roots, serrated leaves, and fasciation, as well as defective patterns of cell division and differentiation in the meristem. Mutant plants had 2.5 to 4.5-fold higher expression of ATGR1, ATBRCA1 and RAD51 genes. TEB is required for normal  progression of DNA replication and for correct expression of genes during development.; helicases;ATP-dependent helicases;nucleic acid binding;ATP binding;DNA-directed DNA polymerases;DNA binding; FUNCTIONS IN: in 6 functions; INVOLVED IN: regulation of gene expression, DNA replication, DNA recombination, photomorphogenesis; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA-directed DNA polymerase, family A, palm domain (InterPro:IPR001098), DNA/RNA helicase, C-terminal (InterPro:IPR001650), DNA polymerase A domain (InterPro:IPR002298), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase (TAIR:AT2G42270.1); Has 17628 Blast hits to 16579 proteins in 2941 species: Archae - 600; Bacteria - 7507; Metazoa - 1254; Fungi - 1190; Plants - 590; Viruses - 412; Other Eukaryotes - 6075 (source: NCBI BLink). & (reliability: 1638.0) &  (original description: no original description)","protein_coding"
"Kfl00339_0030","kfl00339_0030_v1.1","Klebsormidium nitens","(at3g19210 : 969.0) Encodes RAD54, a member of the SWI2/SNF2 family of DNA-stimulated ATPases.  Functions in DNA repair via homologous recombination.; homolog of RAD54 (RAD54); FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: DNA repair, response to gamma radiation, double-strand break repair via homologous recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: style (sensu Poaceae), hydathode, root, petiole; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: switch 2 (TAIR:AT1G03750.1). & (q7g8y3|isw2_orysa : 216.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1938.0) &  (original description: no original description)","protein_coding"
"Kfl00341_0030","kfl00341_0030_v1.1","Klebsormidium nitens","(at5g19210 : 334.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G12770.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p46942|db10_nicsy : 129.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 668.0) &  (original description: no original description)","protein_coding"
"Kfl00344_0100","kfl00344_0100_v1.1","Klebsormidium nitens","(at5g51280 : 779.0) DEAD-box protein abstrakt, putative; FUNCTIONS IN: helicase activity, zinc ion binding, ATP-dependent helicase activity, nucleic acid binding, ATP binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, CCHC-type (InterPro:IPR001878), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT4G33370.1); Has 46358 Blast hits to 45535 proteins in 3129 species: Archae - 906; Bacteria - 23651; Metazoa - 6388; Fungi - 4930; Plants - 2690; Viruses - 10; Other Eukaryotes - 7783 (source: NCBI BLink). & (p46942|db10_nicsy : 256.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1558.0) &  (original description: no original description)","protein_coding"
"Kfl00358_0020","kfl00358_0020_v1.1","Klebsormidium nitens","(at2g42520 : 638.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT3G58510.3); Has 140248 Blast hits to 67514 proteins in 3679 species: Archae - 1004; Bacteria - 58923; Metazoa - 37605; Fungi - 9665; Plants - 13202; Viruses - 1099; Other Eukaryotes - 18750 (source: NCBI BLink). & (p46942|db10_nicsy : 324.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1276.0) &  (original description: no original description)","protein_coding"
"Kfl00381_0040","kfl00381_0040_v1.1","Klebsormidium nitens","(at1g10930 : 306.0) DNA helicase involved in the maintenance of genome stability by modulation of the DNA damage response and suppression of homologous recombination.; RECQ4A; FUNCTIONS IN: helicase activity, ATP-dependent 3'-5' DNA helicase activity, ATP-dependent helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: chromosome organization, response to DNA damage stimulus, double-strand break repair via homologous recombination; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RQC domain (InterPro:IPR018982), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Helicase/RNase D C-terminal, HRDC domain (InterPro:IPR002121); BEST Arabidopsis thaliana protein match is: RECQ helicase L4B (TAIR:AT1G60930.1); Has 34923 Blast hits to 34782 proteins in 2821 species: Archae - 633; Bacteria - 21324; Metazoa - 3687; Fungi - 2728; Plants - 1606; Viruses - 18; Other Eukaryotes - 4927 (source: NCBI BLink). & (reliability: 612.0) &  (original description: no original description)","protein_coding"
"Kfl00384_0060","kfl00384_0060_v1.1","Klebsormidium nitens","(at1g01040 : 265.0) Encodes a Dicer homolog. Dicer is a RNA helicase involved in microRNA processing. Mutations in this locus can result in embryo lethality. Embryo shape at seed maturity is globular-elongate. Other mutants convert the floral meristems to an indeterminate state, others yet show defects in ovule development. mRNA is expressed in all shoot tissues. DCL1 is able to produce miRNAs and siRNAs.; dicer-like 1 (DCL1); CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit (InterPro:IPR006935), Double-stranded RNA-binding (InterPro:IPR001159), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Ribonuclease III (InterPro:IPR000999), Double-stranded RNA-binding-like (InterPro:IPR014720), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Dicer double-stranded RNA-binding fold (InterPro:IPR005034), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: dicer-like 3 (TAIR:AT3G43920.1). & (gnl|cdd|34653 : 248.0) no description available & (gnl|cdd|37260 : 88.5) no description available & (reliability: 530.0) &  (original description: no original description)","protein_coding"
"Kfl00389_0020","kfl00389_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00417_0080","kfl00417_0080_v1.1","Klebsormidium nitens","(at5g61140 : 2262.0) Encodes a predicted protein with 30% identity with MER3/RCK.; U5 small nuclear ribonucleoprotein helicase; FUNCTIONS IN: in 6 functions; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Sec63 domain (InterPro:IPR004179), Sec63 domain, subgroup (InterPro:IPR018127), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase, putative (TAIR:AT1G20960.2). & (reliability: 4524.0) &  (original description: no original description)","protein_coding"
"Kfl00433_0080","kfl00433_0080_v1.1","Klebsormidium nitens","(at1g33390 : 423.0) Over-expression of this gene results in stem fasciation.  The predicted amino acid sequence reveals the presence of two   domains (DEXH-box or DEAD-box helicase and DUF1065 domain) and fragments of two more domains (HrpA domain and HA2 domain).; FASCIATED STEM 4 (FAS4); FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, putative (TAIR:AT3G26560.1); Has 16056 Blast hits to 9082 proteins in 1556 species: Archae - 2; Bacteria - 6415; Metazoa - 3625; Fungi - 2171; Plants - 1181; Viruses - 334; Other Eukaryotes - 2328 (source: NCBI BLink). & (reliability: 846.0) &  (original description: no original description)","protein_coding"
"Kfl00437_0050","kfl00437_0050_v1.1","Klebsormidium nitens","(at2g18760 : 875.0) chromatin remodeling 8 (CHR8); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; INVOLVED IN: DNA repair, response to gamma radiation; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling 24 (TAIR:AT5G63950.1); Has 17230 Blast hits to 14463 proteins in 1653 species: Archae - 99; Bacteria - 4180; Metazoa - 3846; Fungi - 4219; Plants - 1677; Viruses - 118; Other Eukaryotes - 3091 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 270.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1750.0) &  (original description: no original description)","protein_coding"
"Kfl00482_0080","kfl00482_0080_v1.1","Klebsormidium nitens","(at5g08110 : 426.0) nucleic acid binding;ATP-dependent helicases;ATP binding;helicases;ATP-dependent helicases; FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), Ubiquitin supergroup (InterPro:IPR019955), Protein of unknown function DUF1998 (InterPro:IPR018973), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G40700.1); Has 14986 Blast hits to 14312 proteins in 2354 species: Archae - 833; Bacteria - 9982; Metazoa - 976; Fungi - 914; Plants - 633; Viruses - 5; Other Eukaryotes - 1643 (source: NCBI BLink). & (reliability: 852.0) &  (original description: no original description)","protein_coding"
"Kfl00490_0080","kfl00490_0080_v1.1","Klebsormidium nitens","(at3g54460 : 639.0) SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein; FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, nucleic acid binding, ATP binding; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), SNF2-related (InterPro:IPR000330), F-box domain, Skp2-like (InterPro:IPR022364), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: DNA/RNA helicase protein (TAIR:AT5G22750.1); Has 15028 Blast hits to 11196 proteins in 1367 species: Archae - 59; Bacteria - 4030; Metazoa - 3400; Fungi - 4173; Plants - 1458; Viruses - 121; Other Eukaryotes - 1787 (source: NCBI BLink). & (reliability: 1278.0) &  (original description: no original description)","protein_coding"
"Kfl00493_0070","kfl00493_0070_v1.1","Klebsormidium nitens","(at4g00660 : 715.0) RNAhelicase-like 8 (RH8); FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: viral reproduction, virus-host interaction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G45810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p41380|if4a3_nicpl : 276.0) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 1430.0) &  (original description: no original description)","protein_coding"
"Kfl00502_0080","kfl00502_0080_v1.1","Klebsormidium nitens","(at4g18465 : 521.0) RNA helicase family protein; FUNCTIONS IN: RNA helicase activity, helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase family protein (TAIR:AT1G32490.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1042.0) &  (original description: no original description)","protein_coding"
"Kfl00513_0100","kfl00513_0100_v1.1","Klebsormidium nitens","(at1g26370 : 699.0) RNA helicase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), ATPase, AAA+ type, core (InterPro:IPR003593), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, putative (TAIR:AT3G26560.1); Has 9899 Blast hits to 9180 proteins in 1561 species: Archae - 2; Bacteria - 3369; Metazoa - 2309; Fungi - 1230; Plants - 848; Viruses - 465; Other Eukaryotes - 1676 (source: NCBI BLink). & (reliability: 1398.0) &  (original description: no original description)","protein_coding"
"Kfl00518_0080","kfl00518_0080_v1.1","Klebsormidium nitens","(at5g26742 : 552.0) embryo defective 1138 (emb1138); FUNCTIONS IN: in 6 functions; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), GUCT (InterPro:IPR012562), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, CCHC-type (InterPro:IPR001878), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: putative mitochondrial RNA helicase 2 (TAIR:AT3G22330.1). & (q41382|rh7_spiol : 351.0) DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) & (reliability: 1104.0) &  (original description: no original description)","protein_coding"
"Kfl00528_0020","kfl00528_0020_v1.1","Klebsormidium nitens","(at5g08110 : 753.0) nucleic acid binding;ATP-dependent helicases;ATP binding;helicases;ATP-dependent helicases; FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), Ubiquitin supergroup (InterPro:IPR019955), Protein of unknown function DUF1998 (InterPro:IPR018973), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G40700.1); Has 14986 Blast hits to 14312 proteins in 2354 species: Archae - 833; Bacteria - 9982; Metazoa - 976; Fungi - 914; Plants - 633; Viruses - 5; Other Eukaryotes - 1643 (source: NCBI BLink). & (reliability: 1506.0) &  (original description: no original description)","protein_coding"
"Kfl00546_0070","kfl00546_0070_v1.1","Klebsormidium nitens","(at1g05490 : 115.0) chromatin remodeling 31 (chr31); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling 40 (TAIR:AT3G24340.1); Has 38115 Blast hits to 26256 proteins in 2107 species: Archae - 207; Bacteria - 10267; Metazoa - 11226; Fungi - 5719; Plants - 1929; Viruses - 244; Other Eukaryotes - 8523 (source: NCBI BLink). & (reliability: 224.0) &  (original description: no original description)","protein_coding"
"Kfl00590_0040","kfl00590_0040_v1.1","Klebsormidium nitens","(at2g28290 : 922.0) Encodes a SWI2/SNF2-like protein in the SNF2 subclass. Homozygous plants with null mutations exhibit premature termination of the meristem and carpelloid structures from the inflorescence meristem. Co-activator of floral  homeotic gene expression. Acts with LFY to regulate shoot apical meristem identity. Required for meristem maintenance. Regulates  flowering under a non-inductive photoperiod. It promotes the expression of CUC2 during cotyledon boundary formation.  Affects reproductive shoot apical meristem function by regulating the expression of WUS. In CHiP experiments SYD binds to WUS promoter. Present as two forms in the nucleus, full-length and truncated, with the latter apparently lacking the C-terminal domain. The ratio of the two forms  differs in juvenile and in adult tissues. The C-terminal domain is not required for activity.; SPLAYED (SYD); CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT3G06010.1); Has 38598 Blast hits to 29293 proteins in 2471 species: Archae - 323; Bacteria - 8462; Metazoa - 11641; Fungi - 6683; Plants - 2383; Viruses - 257; Other Eukaryotes - 8849 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 428.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1844.0) &  (original description: no original description)","protein_coding"
"Kfl00612_0020","kfl00612_0020_v1.1","Klebsormidium nitens","(at2g35920 : 974.0) RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G04895.1); Has 15667 Blast hits to 10761 proteins in 1709 species: Archae - 0; Bacteria - 5024; Metazoa - 4470; Fungi - 1848; Plants - 1329; Viruses - 777; Other Eukaryotes - 2219 (source: NCBI BLink). & (reliability: 1948.0) &  (original description: no original description)","protein_coding"
"Kfl00630_0030","kfl00630_0030_v1.1","Klebsormidium nitens","(at3g18600 : 568.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G65900.1); Has 44310 Blast hits to 43105 proteins in 3082 species: Archae - 753; Bacteria - 22440; Metazoa - 6214; Fungi - 4682; Plants - 2500; Viruses - 12; Other Eukaryotes - 7709 (source: NCBI BLink). & (p46942|db10_nicsy : 165.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1078.0) &  (original description: no original description)","protein_coding"
"Kfl00649_0030","kfl00649_0030_v1.1","Klebsormidium nitens","(at1g05490 : 164.0) chromatin remodeling 31 (chr31); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling 40 (TAIR:AT3G24340.1); Has 38115 Blast hits to 26256 proteins in 2107 species: Archae - 207; Bacteria - 10267; Metazoa - 11226; Fungi - 5719; Plants - 1929; Viruses - 244; Other Eukaryotes - 8523 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 88.6) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 328.0) &  (original description: no original description)","protein_coding"
"Kfl00656_0100","kfl00656_0100_v1.1","Klebsormidium nitens","(at5g05450 : 584.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G71370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p46942|db10_nicsy : 191.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1168.0) &  (original description: no original description)","protein_coding"
"Kfl00662_0060","kfl00662_0060_v1.1","Klebsormidium nitens","(at1g16280 : 431.0) RNA helicase 36 (RH36); FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; INVOLVED IN: post-embryonic development, embryo sac development, rRNA processing; LOCATED IN: nucleus; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 43946 Blast hits to 42938 proteins in 3095 species: Archae - 969; Bacteria - 21832; Metazoa - 6240; Fungi - 4948; Plants - 2606; Viruses - 36; Other Eukaryotes - 7315 (source: NCBI BLink). & (q40468|if415_tobac : 181.0) Eukaryotic initiation factor 4A-15 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-15) (eIF-4A-15) - Nicotiana tabacum (Common tobacco) & (reliability: 862.0) &  (original description: no original description)","protein_coding"
"Kfl00702_0030","kfl00702_0030_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00738_0060","kfl00738_0060_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00768_0040","kfl00768_0040_v1.1","Klebsormidium nitens","(at1g77030 : 729.0) hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides;ATP-dependent helicases;nucleic acid binding;ATP binding;RNA binding;helicases; FUNCTIONS IN: in 6 functions; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DBP10CT (InterPro:IPR012541), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 42888 Blast hits to 42073 proteins in 3063 species: Archae - 831; Bacteria - 21864; Metazoa - 5973; Fungi - 4375; Plants - 2654; Viruses - 31; Other Eukaryotes - 7160 (source: NCBI BLink). & (p46942|db10_nicsy : 191.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1458.0) &  (original description: no original description)","protein_coding"
"Kfl00824_0040","kfl00824_0040_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl00842_0020","kfl00842_0020_v1.1","Klebsormidium nitens","(at1g20920 : 717.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G09620.1); Has 45185 Blast hits to 44279 proteins in 3076 species: Archae - 794; Bacteria - 22443; Metazoa - 6674; Fungi - 4936; Plants - 2699; Viruses - 11; Other Eukaryotes - 7628 (source: NCBI BLink). & (p46942|db10_nicsy : 302.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1308.0) &  (original description: no original description)","protein_coding"
"Kfl00844_0040","kfl00844_0040_v1.1","Klebsormidium nitens","(q40471|if4a9_tobac : 738.0) Eukaryotic initiation factor 4A-9 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-9) (eIF-4A-9) - Nicotiana tabacum (Common tobacco) & (at3g13920 : 733.0) eukaryotic translation initiation factor 4A-1; eukaryotic translation initiation factor 4A1 (EIF4A1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eif4a-2 (TAIR:AT1G54270.2). & (reliability: 1466.0) &  (original description: no original description)","protein_coding"
"Kfl00858_0010","kfl00858_0010_v1.1","Klebsormidium nitens","(at2g35920 : 310.0) RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G04895.1); Has 15667 Blast hits to 10761 proteins in 1709 species: Archae - 0; Bacteria - 5024; Metazoa - 4470; Fungi - 1848; Plants - 1329; Viruses - 777; Other Eukaryotes - 2219 (source: NCBI BLink). & (reliability: 620.0) &  (original description: no original description)","protein_coding"
"Kfl00964_0020","kfl00964_0020_v1.1","Klebsormidium nitens","(at2g42520 : 125.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT3G58510.3); Has 140248 Blast hits to 67514 proteins in 3679 species: Archae - 1004; Bacteria - 58923; Metazoa - 37605; Fungi - 9665; Plants - 13202; Viruses - 1099; Other Eukaryotes - 18750 (source: NCBI BLink). & (q40468|if415_tobac : 97.8) Eukaryotic initiation factor 4A-15 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-15) (eIF-4A-15) - Nicotiana tabacum (Common tobacco) & (reliability: 228.0) &  (original description: no original description)","protein_coding"
"Kfl00995_0010","kfl00995_0010_v1.1","Klebsormidium nitens","(at3g54280 : 889.0) ROOT GROWTH DEFECTIVE 3 (RGD3); FUNCTIONS IN: helicase activity, binding, DNA binding, nucleic acid binding, ATP binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), DEAD-like helicase, N-terminal (InterPro:IPR014001), Armadillo-type fold (InterPro:IPR016024), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT3G06010.1). & (q7g8y3|isw2_orysa : 226.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1778.0) &  (original description: no original description)","protein_coding"
"Kfl01003_0040","kfl01003_0040_v1.1","Klebsormidium nitens","(at2g47330 : 721.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G20920.1); Has 46798 Blast hits to 46047 proteins in 3085 species: Archae - 817; Bacteria - 24489; Metazoa - 6167; Fungi - 4661; Plants - 2616; Viruses - 11; Other Eukaryotes - 8037 (source: NCBI BLink). & (p46942|db10_nicsy : 298.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1442.0) &  (original description: no original description)","protein_coding"
"Kfl01320_0020","kfl01320_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl01472_0010","kfl01472_0010_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"Kfl01476_0010","kfl01476_0010_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding"
"LOC_Os01g01312","No alias","Oryza sativa","retrotransposon protein, putative, Ty1-copia subclass, expressed","protein_coding"
"LOC_Os01g02884","No alias","Oryza sativa","ATP-dependent RNA helicase DHX36, putative, expressed","protein_coding"
"LOC_Os01g07080","No alias","Oryza sativa","DEAD-box ATP-dependent RNA helicase, putative, expressed","protein_coding"
"LOC_Os01g07740","No alias","Oryza sativa","DEAD-box ATP-dependent RNA helicase 14, putative, expressed","protein_coding"
"LOC_Os01g08930","No alias","Oryza sativa","DEAD-box ATP-dependent RNA helicase, putative, expressed","protein_coding"
"LOC_Os01g10050","No alias","Oryza sativa","DEAD-box ATP-dependent RNA helicase, putative, expressed","protein_coding"
"LOC_Os01g11370","No alias","Oryza sativa","ATP-dependent RNA helicase, putative, expressed","protein_coding"
"LOC_Os01g15300","No alias","Oryza sativa","zinc finger helicase family protein, putative, expressed","protein_coding"
"LOC_Os01g27040","No alias","Oryza sativa","chromatin-remodeling complex ATPase chain, putative, expressed","protein_coding"
"LOC_Os01g36860","No alias","Oryza sativa","DEAD-box ATP-dependent RNA helicase 40, putative, expressed","protein_coding"
"LOC_Os01g43120","No alias","Oryza sativa","DEAD/DEAH box helicase, putative, expressed","protein_coding"
"LOC_Os01g43130","No alias","Oryza sativa","DEAD/DEAH box helicase, putative, expressed","protein_coding"
"LOC_Os01g44990","No alias","Oryza sativa","ercc6 protein, putative, expressed","protein_coding"
"LOC_Os01g45190","No alias","Oryza sativa","DEAD-box ATP-dependent RNA helicase, putative, expressed","protein_coding"
"LOC_Os01g56190","No alias","Oryza sativa","HVT1, putative, expressed","protein_coding"
"LOC_Os01g57110","No alias","Oryza sativa","SNF2 family N-terminal domain containing protein, expressed","protein_coding"
"LOC_Os01g65850","No alias","Oryza sativa","CHD3-type chromatin-remodeling factor PICKLE, putative, expressed","protein_coding"
"LOC_Os01g68120","No alias","Oryza sativa","DCL3, putative, expressed","protein_coding"
"LOC_Os01g68320","No alias","Oryza sativa","DEAD-box ATP-dependent RNA helicase 30, putative, expressed","protein_coding"
"LOC_Os01g72310","No alias","Oryza sativa","OsFBO7 - F-box and other domain containing protein, expressed","protein_coding"
"LOC_Os01g73900","No alias","Oryza sativa","DEAD-box ATP-dependent RNA helicase, putative, expressed","protein_coding"
"LOC_Os02g01740","No alias","Oryza sativa","U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed","protein_coding"
"LOC_Os02g02150","No alias","Oryza sativa","ATP-dependent helicase HRQ1, putative, expressed","protein_coding"
"LOC_Os02g02290","No alias","Oryza sativa","SNF2 family N-terminal domain containing protein, expressed","protein_coding"
"LOC_Os02g05330","No alias","Oryza sativa","DEAD-box ATP-dependent RNA helicase, putative, expressed","protein_coding"
"LOC_Os02g05660","No alias","Oryza sativa","DEAD-box ATP-dependent RNA helicase 35A, putative, expressed","protein_coding"
"LOC_Os02g06592","No alias","Oryza sativa","SNF2 family N-terminal domain containing protein, expressed","protein_coding"
"LOC_Os02g12840","No alias","Oryza sativa","DEAD-box ATP-dependent RNA helicase, putative, expressed","protein_coding"
"LOC_Os02g19860","No alias","Oryza sativa","pre-mRNA-splicing factor ATP-dependent RNA helicase, putative, expressed","protein_coding"
"LOC_Os02g32570","No alias","Oryza sativa","SNF2 family N-terminal domain containing protein, expressed","protein_coding"
"LOC_Os02g40450","No alias","Oryza sativa","DEAD/DEAH box helicase domain containing protein, expressed","protein_coding"
"LOC_Os02g42406","No alias","Oryza sativa","DEAD-box ATP-dependent RNA helicase, putative, expressed","protein_coding"
"LOC_Os02g42860","No alias","Oryza sativa","DEAD-box ATP-dependent RNA helicase, putative, expressed","protein_coding"
"LOC_Os02g43460","No alias","Oryza sativa","required to maintain repression 1, putative, expressed","protein_coding"
"LOC_Os02g46450","No alias","Oryza sativa","helicase conserved C-terminal domain containing protein, expressed","protein_coding"
"LOC_Os02g48100","No alias","Oryza sativa","DEAD-box ATP-dependent RNA helicase, putative, expressed","protein_coding"
"LOC_Os02g50370","No alias","Oryza sativa","helicase domain-containing protein, putative, expressed","protein_coding"
"LOC_Os02g52510","No alias","Oryza sativa","SNF2 family N-terminal domain containing protein, expressed","protein_coding"
"LOC_Os02g55260","No alias","Oryza sativa","DEAD-box ATP-dependent RNA helicase, putative, expressed","protein_coding"
"LOC_Os02g57980","No alias","Oryza sativa","DEAD/DEAH box helicase, putative, expressed","protein_coding"
"LOC_Os03g01200","No alias","Oryza sativa","SNF2 family N-terminal domain containing protein, expressed","protein_coding"
"LOC_Os03g01830","No alias","Oryza sativa","DEAD-box ATP-dependent RNA helicase, putative, expressed","protein_coding"
"LOC_Os03g02970","No alias","Oryza sativa","Dicer, putative, expressed","protein_coding"
"LOC_Os03g06220","No alias","Oryza sativa","DEAD-box ATP-dependent RNA helicase, putative, expressed","protein_coding"
"LOC_Os03g06920","No alias","Oryza sativa","DRD1, putative, expressed","protein_coding"
"LOC_Os03g11470","No alias","Oryza sativa","DEAD/DEAH box helicase domain containing protein, expressed","protein_coding"
"LOC_Os03g12000","No alias","Oryza sativa","DEAD-box ATP-dependent RNA helicase, putative, expressed","protein_coding"
"LOC_Os03g19530","No alias","Oryza sativa","DEAD-box ATP-dependent RNA helicase, putative, expressed","protein_coding"
"LOC_Os03g19960","No alias","Oryza sativa","ATP-dependent RNA helicase, putative, expressed","protein_coding"
"LOC_Os03g22900","No alias","Oryza sativa","SNF2 family N-terminal domain containing protein, expressed","protein_coding"
"LOC_Os03g36930","No alias","Oryza sativa","DEAD-box ATP-dependent RNA helicase, putative, expressed","protein_coding"
"LOC_Os03g38740","No alias","Oryza sativa","Dicer, putative, expressed","protein_coding"
"LOC_Os03g46610","No alias","Oryza sativa","DEAD-box ATP-dependent RNA helicase, putative, expressed","protein_coding"
"LOC_Os03g50090","No alias","Oryza sativa","transposon protein, putative, CACTA, En/Spm sub-class, expressed","protein_coding"
"LOC_Os03g51230","No alias","Oryza sativa","SNF2 family N-terminal domain containing protein, expressed","protein_coding"
"LOC_Os03g51900","No alias","Oryza sativa","DEAD-box ATP-dependent RNA helicase, putative, expressed","protein_coding"
"LOC_Os03g53500","No alias","Oryza sativa","helicase conserved C-terminal domain containing protein, expressed","protein_coding"
"LOC_Os03g53760","No alias","Oryza sativa","ATP-dependent RNA helicase DHX36, putative, expressed","protein_coding"
"LOC_Os03g58810","No alias","Oryza sativa","DEAD-box ATP-dependent RNA helicase, putative, expressed","protein_coding"
"LOC_Os03g59050","No alias","Oryza sativa","DEAD-box ATP-dependent RNA helicase, putative, expressed","protein_coding"
"LOC_Os03g61220","No alias","Oryza sativa","DEAD-box ATP-dependent RNA helicase 3, putative, expressed","protein_coding"
"LOC_Os04g09800","No alias","Oryza sativa","SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A, putative, expressed","protein_coding"
"LOC_Os04g35260","No alias","Oryza sativa","DEAD/DEAH box helicase domain containing protein, expressed","protein_coding"
"LOC_Os04g35420","No alias","Oryza sativa","helicase conserved C-terminal domain containing protein, expressed","protein_coding"
"LOC_Os04g38630","No alias","Oryza sativa","helicase conserved C-terminal domain containing protein, expressed","protein_coding"
"LOC_Os04g40970","No alias","Oryza sativa","DEAD-box ATP-dependent RNA helicase, putative, expressed","protein_coding"
"LOC_Os04g43050","No alias","Oryza sativa","Dicer, putative, expressed","protein_coding"
"LOC_Os04g43140","No alias","Oryza sativa","DEAD-box ATP-dependent RNA helicase, putative, expressed","protein_coding"
"LOC_Os04g45040","No alias","Oryza sativa","DEAD-box ATP-dependent RNA helicase, putative, expressed","protein_coding"
"LOC_Os04g53720","No alias","Oryza sativa","SNF2 family N-terminal domain containing protein, expressed","protein_coding"
"LOC_Os04g59620","No alias","Oryza sativa","SNF2 family N-terminal domain containing protein, expressed","protein_coding"
"LOC_Os04g59624","No alias","Oryza sativa","SNF2 family N-terminal domain containing protein, expressed","protein_coding"
"LOC_Os05g01990","No alias","Oryza sativa","DEAD-box ATP-dependent RNA helicase, putative, expressed","protein_coding"
"LOC_Os05g05230","No alias","Oryza sativa","expressed protein","protein_coding"
"LOC_Os05g05780","No alias","Oryza sativa","chromatin-remodeling complex ATPase chain, putative, expressed","protein_coding"
"LOC_Os05g05810","No alias","Oryza sativa","DEAD-box ATP-dependent RNA helicase, putative, expressed","protein_coding"
"LOC_Os05g15890","No alias","Oryza sativa","SNF2 family N-terminal domain containing protein, expressed","protein_coding"
"LOC_Os05g32370","No alias","Oryza sativa","ATP-dependent RNA helicase, putative, expressed","protein_coding"
"LOC_Os05g32610","No alias","Oryza sativa","required to maintain repression 1, putative, expressed","protein_coding"
"LOC_Os06g08480","No alias","Oryza sativa","CHD3-type chromatin-remodeling factor PICKLE, putative, expressed","protein_coding"
"LOC_Os06g09280","No alias","Oryza sativa","ATP-dependent RNA helicase, putative, expressed","protein_coding"
"LOC_Os06g14440","No alias","Oryza sativa","DRD1, putative, expressed","protein_coding"
"LOC_Os06g23530","No alias","Oryza sativa","pre-mRNA-splicing factor ATP-dependent RNA helicase, putative, expressed","protein_coding"
"LOC_Os06g33520","No alias","Oryza sativa","DEAD/DEAH box helicase, putative, expressed","protein_coding"
"LOC_Os06g40020","No alias","Oryza sativa","DEAD-box ATP-dependent RNA helicase 52A, putative, expressed","protein_coding"
"LOC_Os06g48210","No alias","Oryza sativa","DEAD-box ATP-dependent RNA helicase, putative, expressed","protein_coding"
"LOC_Os06g48750","No alias","Oryza sativa","DEAD-box ATP-dependent RNA helicase, putative, expressed","protein_coding"
"LOC_Os07g05050","No alias","Oryza sativa","DEAD-box ATP-dependent RNA helicase, putative, expressed","protein_coding"
"LOC_Os07g10250","No alias","Oryza sativa","DEAD-box ATP-dependent RNA helicase 52B, putative, expressed","protein_coding"
"LOC_Os07g20580","No alias","Oryza sativa","DEAD-box ATP-dependent RNA helicase, putative, expressed","protein_coding"
"LOC_Os07g25390","No alias","Oryza sativa","DRD1, putative, expressed","protein_coding"
"LOC_Os07g31450","No alias","Oryza sativa","CHR4/MI-2-LIKE, putative, expressed","protein_coding"
"LOC_Os07g32430","No alias","Oryza sativa","pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16, putative, expressed","protein_coding"
"LOC_Os07g32730","No alias","Oryza sativa","DNA repair protein rhp16, putative, expressed","protein_coding"
"LOC_Os07g33340","No alias","Oryza sativa","DEAD-box ATP-dependent RNA helicase, putative, expressed","protein_coding"
"LOC_Os07g40730","No alias","Oryza sativa","SNF2 domain-containing protein, putative, expressed","protein_coding"
"LOC_Os07g41564","No alias","Oryza sativa","DEAD/DEAH box helicase domain protein, putative, expressed","protein_coding"
"LOC_Os07g42900","No alias","Oryza sativa","helicase domain-containing protein, putative, expressed","protein_coding"
"LOC_Os07g43980","No alias","Oryza sativa","DEAD-box ATP-dependent RNA helicase, putative, expressed","protein_coding"
"LOC_Os07g44210","No alias","Oryza sativa","SNF2 family N-terminal domain containing protein, expressed","protein_coding"
"LOC_Os07g44800","No alias","Oryza sativa","SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A, putative, expressed","protein_coding"
"LOC_Os07g45360","No alias","Oryza sativa","DEAD/DEAH box helicase domain containing protein, expressed","protein_coding"
"LOC_Os07g46580","No alias","Oryza sativa","DEAD-box ATP-dependent RNA helicase, putative, expressed","protein_coding"
"LOC_Os07g46590","No alias","Oryza sativa","SNF2 family N-terminal domain containing protein, expressed","protein_coding"
"LOC_Os07g48360","No alias","Oryza sativa","helicase conserved C-terminal domain containing protein, expressed","protein_coding"
"LOC_Os07g49210","No alias","Oryza sativa","helicase conserved C-terminal domain containing protein, expressed","protein_coding"
"LOC_Os08g05810","No alias","Oryza sativa","DEAD-box ATP-dependent RNA helicase, putative, expressed","protein_coding"
"LOC_Os08g06344","No alias","Oryza sativa","transposon protein, putative, CACTA, En/Spm sub-class, expressed","protein_coding"
"LOC_Os08g08220","No alias","Oryza sativa","EDA16, putative, expressed","protein_coding"
"LOC_Os08g14610","No alias","Oryza sativa","DRD1, putative, expressed","protein_coding"
"LOC_Os08g19250","No alias","Oryza sativa","retrotransposon protein, putative, Ty1-copia subclass, expressed","protein_coding"
"LOC_Os08g24760","No alias","Oryza sativa","ATP-dependent RNA helicase, putative, expressed","protein_coding"
"LOC_Os08g32090","No alias","Oryza sativa","DEAD-box ATP-dependent RNA helicase, putative, expressed","protein_coding"
"LOC_Os09g21520","No alias","Oryza sativa","DEAD-box ATP-dependent RNA helicase, putative, expressed","protein_coding"
"LOC_Os09g27060","No alias","Oryza sativa","SNF2 family N-terminal domain containing protein, expressed","protein_coding"
"LOC_Os09g34910","No alias","Oryza sativa","DEAD-box ATP-dependent RNA helicase 7, putative, expressed","protein_coding"
"LOC_Os10g31970","No alias","Oryza sativa","SNF2 family N-terminal domain containing protein, expressed","protein_coding"
"LOC_Os10g33275","No alias","Oryza sativa","DEAD/DEAH box helicase domain containing protein, expressed","protein_coding"
"LOC_Os10g34430","No alias","Oryza sativa","Dicer, putative, expressed","protein_coding"
"LOC_Os10g35990","No alias","Oryza sativa","DEAD-box ATP-dependent RNA helicase, putative, expressed","protein_coding"
"LOC_Os11g07500","No alias","Oryza sativa","DSHCT domain containing protein, expressed","protein_coding"
"LOC_Os11g07870","No alias","Oryza sativa","DEAD/DEAH box helicase domain containing protein, expressed","protein_coding"
"LOC_Os11g20554","No alias","Oryza sativa","ATP-dependent RNA helicase, putative, expressed","protein_coding"
"LOC_Os11g32880","No alias","Oryza sativa","DEAD-box ATP-dependent RNA helicase, putative, expressed","protein_coding"
"LOC_Os11g38670","No alias","Oryza sativa","DEAD-box ATP-dependent RNA helicase, putative, expressed","protein_coding"
"LOC_Os11g44910","No alias","Oryza sativa","DEAD-box ATP-dependent RNA helicase, putative, expressed","protein_coding"
"LOC_Os11g46240","No alias","Oryza sativa","retrotransposon protein, putative, unclassified, expressed","protein_coding"
"LOC_Os12g18140","No alias","Oryza sativa","superkiller viralicidic activity 2-like 2, putative, expressed","protein_coding"
"LOC_Os12g19370","No alias","Oryza sativa","DNA polymerase I family protein, expressed","protein_coding"
"LOC_Os12g29660","No alias","Oryza sativa","DEAD-box ATP-dependent RNA helicase, putative, expressed","protein_coding"
"LOC_Os12g41715","No alias","Oryza sativa","DEAD-box ATP-dependent RNA helicase, putative, expressed","protein_coding"
"MA_10185395g0010","No alias","Picea abies","(at1g61140 : 185.0) embryo sac development arrest 16 (EDA16); FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, ATP binding, nucleic acid binding; INVOLVED IN: embryo sac development; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related (TAIR:AT1G11100.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 370.0) &  (original description: no original description)","protein_coding"
"MA_10317345g0020","No alias","Picea abies","(at5g11170 : 466.0) DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; INVOLVED IN: response to cadmium ion; LOCATED IN: nucleolus; EXPRESSED IN: guard cell, root, cultured cell; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box RNA helicase family protein  (TAIR:AT5G11200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q41741|if4a_maize : 163.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Zea mays (Maize) & (reliability: 932.0) &  (original description: no original description)","protein_coding"
"MA_10334041g0020","No alias","Picea abies","(at5g54910 : 521.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G65900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p46942|db10_nicsy : 147.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1042.0) &  (original description: no original description)","protein_coding"
"MA_104034g0010","No alias","Picea abies","(at5g66750 : 811.0) Protein is similar to SWI2/SNF2 chromatin remodeling proteins. DDM1 is appears to act as a chromatin-remodeling ATPase involved in cytosine methylation in CG and non-CG contexts. Involved in gene silencing and maintenance of DNA methylation and histone methylation. Hypomethylation of many genomic regions occurs in ddm1 mutants, and can cause several phenotypic abnormalities, but some loci, such as BONSAI (At1g73177) can be hypermethylated in ddm1 mutants after several generations, leading to different phenotypes. DDM1 might be involved in establishing a heterochromain boundary. A line expressing an RNAi targeted against DDM1  shows some resistance to agrobacterium-mediated root transformation.; chromatin remodeling 1 (CHR1); FUNCTIONS IN: helicase activity, ATPase activity; INVOLVED IN: methylation-dependent chromatin silencing, DNA mediated transformation, transposition, RNA-mediated; LOCATED IN: nucleosome; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor17 (TAIR:AT5G18620.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 433.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1622.0) &  (original description: no original description)","protein_coding"
"MA_10426097g0020","No alias","Picea abies","(at3g02065 : 592.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, HIT-type (InterPro:IPR007529), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G42520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p46942|db10_nicsy : 221.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1184.0) &  (original description: no original description)","protein_coding"
"MA_10427047g0010","No alias","Picea abies","(at4g09730 : 274.0) Encodes RH39, a DEAD-box protein involved in the introduction of the hidden break into the 23S rRNA in the chloroplasts. Recombinant RH39 binds to the 23S rRNA in a segment adjacent to the stem-loop creating the hidden break target loop in a sequence-dependent manner. Has ATP-hydrolyzing activity at a Kcat of 5.3 /min in the presence of rRNA sequence. Mutants have drastically reduced level of level of ribulose 1,5-bisphosphate carboxylase/oxygenase.; RH39 (RH39); FUNCTIONS IN: LSU rRNA binding, ATPase activity, ATP-dependent helicase activity; INVOLVED IN: chloroplast ribulose bisphosphate carboxylase complex biogenesis, chloroplast rRNA processing; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT3G06980.1); Has 40425 Blast hits to 39698 proteins in 3032 species: Archae - 675; Bacteria - 19989; Metazoa - 5933; Fungi - 4498; Plants - 2407; Viruses - 9; Other Eukaryotes - 6914 (source: NCBI BLink). & (reliability: 548.0) &  (original description: no original description)","protein_coding"
"MA_10427196g0010","No alias","Picea abies","(at2g25170 : 170.0) Encodes a SWI/SWF nuclear-localized chromatin remodeling factor of the CHD3 group. Involved in post-germination repression of embryonic development. Acts with GA to establish repression of embryonic genes upon germination. Protein preferentially accumulates in differentiating tissues. Loss of function alleles are associated with expression of embryonic traits in adult plants and derepression of embryonic genes such as PHEROS1.  Is an extragenic suppressor of slr2 (SSL2).  Mutations in PKL (SSL2) restores lateral root formation in the slr2 mutant slr-1.  It was proposed that PKL/SSL2-mediated chromatin remodeling negatively regulates auxin-mediated LR formation in Arabidopsis.; PICKLE (PKL); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1087 (InterPro:IPR009463), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Protein of unknown function DUF1086 (InterPro:IPR009462), Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor, putative (TAIR:AT4G31900.1); Has 20234 Blast hits to 17178 proteins in 1958 species: Archae - 161; Bacteria - 5176; Metazoa - 5098; Fungi - 4334; Plants - 1876; Viruses - 134; Other Eukaryotes - 3455 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 150.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 340.0) &  (original description: no original description)","protein_coding"
"MA_10427502g0010","No alias","Picea abies","(q40467|if414_tobac : 687.0) Eukaryotic initiation factor 4A-14 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-14) (eIF-4A-14) - Nicotiana tabacum (Common tobacco) & (at1g54270 : 675.0) member of eIF4A - eukaryotic initiation factor 4A; eif4a-2 (EIF4A-2); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 4A1 (TAIR:AT3G13920.4). & (reliability: 1350.0) &  (original description: no original description)","protein_coding"
"MA_10427682g0010","No alias","Picea abies","(at5g44800 : 274.0) chromatin remodeling 4 (CHR4); FUNCTIONS IN: in 6 functions; INVOLVED IN: chromatin assembly or disassembly, regulation of transcription; LOCATED IN: chromatin, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1087 (InterPro:IPR009463), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Homeodomain-related (InterPro:IPR012287), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor CHD3 (PICKLE) (TAIR:AT2G25170.1); Has 35726 Blast hits to 27895 proteins in 2283 species: Archae - 135; Bacteria - 6476; Metazoa - 12546; Fungi - 6155; Plants - 3074; Viruses - 328; Other Eukaryotes - 7012 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 172.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 548.0) &  (original description: no original description)","protein_coding"
"MA_10428112g0010","No alias","Picea abies","(at1g33390 : 798.0) Over-expression of this gene results in stem fasciation.  The predicted amino acid sequence reveals the presence of two   domains (DEXH-box or DEAD-box helicase and DUF1065 domain) and fragments of two more domains (HrpA domain and HA2 domain).; FASCIATED STEM 4 (FAS4); FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, putative (TAIR:AT3G26560.1); Has 16056 Blast hits to 9082 proteins in 1556 species: Archae - 2; Bacteria - 6415; Metazoa - 3625; Fungi - 2171; Plants - 1181; Viruses - 334; Other Eukaryotes - 2328 (source: NCBI BLink). & (reliability: 1596.0) &  (original description: no original description)","protein_coding"
"MA_10428543g0010","No alias","Picea abies","(at4g00660 : 699.0) RNAhelicase-like 8 (RH8); FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: viral reproduction, virus-host interaction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G45810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p41380|if4a3_nicpl : 275.0) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 1398.0) &  (original description: no original description)","protein_coding"
"MA_10429361g0010","No alias","Picea abies","(at2g13370 : 1371.0) chromatin remodeling 5 (CHR5); FUNCTIONS IN: chromatin binding, helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: chromatin assembly or disassembly; LOCATED IN: chromatin, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), Homeodomain-like (InterPro:IPR009057), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor CHD3 (PICKLE) (TAIR:AT2G25170.1); Has 38529 Blast hits to 28045 proteins in 2467 species: Archae - 189; Bacteria - 9973; Metazoa - 8887; Fungi - 6205; Plants - 2508; Viruses - 447; Other Eukaryotes - 10320 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 451.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 2742.0) &  (original description: no original description)","protein_coding"
"MA_10431670g0010","No alias","Picea abies","(at5g39840 : 734.0) ATP-dependent RNA helicase, mitochondrial, putative; FUNCTIONS IN: helicase activity, ATP-dependent RNA helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial degradasome RNA helicase subunit C-terminal (InterPro:IPR022192), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, mitochondrial (SUV3) (TAIR:AT4G14790.1); Has 4068 Blast hits to 4044 proteins in 754 species: Archae - 43; Bacteria - 1236; Metazoa - 267; Fungi - 388; Plants - 157; Viruses - 16; Other Eukaryotes - 1961 (source: NCBI BLink). & (reliability: 1468.0) &  (original description: no original description)","protein_coding"
"MA_10431728g0010","No alias","Picea abies","(at5g51280 : 775.0) DEAD-box protein abstrakt, putative; FUNCTIONS IN: helicase activity, zinc ion binding, ATP-dependent helicase activity, nucleic acid binding, ATP binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, CCHC-type (InterPro:IPR001878), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT4G33370.1); Has 46358 Blast hits to 45535 proteins in 3129 species: Archae - 906; Bacteria - 23651; Metazoa - 6388; Fungi - 4930; Plants - 2690; Viruses - 10; Other Eukaryotes - 7783 (source: NCBI BLink). & (p46942|db10_nicsy : 258.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1550.0) &  (original description: no original description)","protein_coding"
"MA_10432535g0010","No alias","Picea abies","(p35683|if4a_orysa : 628.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Oryza sativa (Rice) & (at1g54270 : 622.0) member of eIF4A - eukaryotic initiation factor 4A; eif4a-2 (EIF4A-2); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 4A1 (TAIR:AT3G13920.4). & (reliability: 1244.0) &  (original description: no original description)","protein_coding"
"MA_10432707g0010","No alias","Picea abies","(at3g06480 : 629.0) DEAD box RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), WW/Rsp5/WWP (InterPro:IPR001202), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase 1 (TAIR:AT3G01540.4); Has 132761 Blast hits to 82344 proteins in 3707 species: Archae - 865; Bacteria - 47475; Metazoa - 37917; Fungi - 12444; Plants - 11781; Viruses - 886; Other Eukaryotes - 21393 (source: NCBI BLink). & (p46942|db10_nicsy : 605.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1258.0) &  (original description: no original description)","protein_coding"
"MA_10434222g0010","No alias","Picea abies","(at5g05130 : 808.0) DNA/RNA helicase protein; FUNCTIONS IN: in 6 functions; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), HIP116, Rad5p N-terminal (InterPro:IPR014905), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: DNA/RNA helicase protein (TAIR:AT5G22750.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 109.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1616.0) &  (original description: no original description)","protein_coding"
"MA_10434449g0010","No alias","Picea abies","(at3g62310 : 1066.0) RNA helicase family protein; FUNCTIONS IN: RNA helicase activity, helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase family protein (TAIR:AT2G47250.1); Has 10517 Blast hits to 9531 proteins in 1639 species: Archae - 4; Bacteria - 3473; Metazoa - 2472; Fungi - 1291; Plants - 883; Viruses - 640; Other Eukaryotes - 1754 (source: NCBI BLink). & (reliability: 2132.0) &  (original description: no original description)","protein_coding"
"MA_10436040g0010","No alias","Picea abies","(p41380|if4a3_nicpl : 523.0) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at3g19760 : 499.0) Encodes an RNA helicase that may be a component of the Exon Junction Complex. Subcellular localization is modulated by stress. Under normal conditions it is localized to the nuceloplasm but under hyopoxic conditions it localizes to the nucleolus and splicing speckles.; eukaryotic initiation factor 4A-III (EIF4A-III); FUNCTIONS IN: protein binding, ATP-dependent helicase activity; INVOLVED IN: mRNA processing, response to hypoxia; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G51380.1); Has 50040 Blast hits to 49280 proteins in 3163 species: Archae - 836; Bacteria - 27183; Metazoa - 6400; Fungi - 4843; Plants - 2693; Viruses - 42; Other Eukaryotes - 8043 (source: NCBI BLink). & (reliability: 998.0) &  (original description: no original description)","protein_coding"
"MA_10436040g0020","No alias","Picea abies","(p41380|if4a3_nicpl : 715.0) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at3g19760 : 687.0) Encodes an RNA helicase that may be a component of the Exon Junction Complex. Subcellular localization is modulated by stress. Under normal conditions it is localized to the nuceloplasm but under hyopoxic conditions it localizes to the nucleolus and splicing speckles.; eukaryotic initiation factor 4A-III (EIF4A-III); FUNCTIONS IN: protein binding, ATP-dependent helicase activity; INVOLVED IN: mRNA processing, response to hypoxia; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G51380.1); Has 50040 Blast hits to 49280 proteins in 3163 species: Archae - 836; Bacteria - 27183; Metazoa - 6400; Fungi - 4843; Plants - 2693; Viruses - 42; Other Eukaryotes - 8043 (source: NCBI BLink). & (reliability: 1374.0) &  (original description: no original description)","protein_coding"
"MA_10436040g0030","No alias","Picea abies","(p41380|if4a3_nicpl : 182.0) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at3g19760 : 175.0) Encodes an RNA helicase that may be a component of the Exon Junction Complex. Subcellular localization is modulated by stress. Under normal conditions it is localized to the nuceloplasm but under hyopoxic conditions it localizes to the nucleolus and splicing speckles.; eukaryotic initiation factor 4A-III (EIF4A-III); FUNCTIONS IN: protein binding, ATP-dependent helicase activity; INVOLVED IN: mRNA processing, response to hypoxia; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G51380.1); Has 50040 Blast hits to 49280 proteins in 3163 species: Archae - 836; Bacteria - 27183; Metazoa - 6400; Fungi - 4843; Plants - 2693; Viruses - 42; Other Eukaryotes - 8043 (source: NCBI BLink). & (reliability: 350.0) &  (original description: no original description)","protein_coding"
"MA_10436248g0010","No alias","Picea abies","(at3g16840 : 420.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 60083 Blast hits to 51461 proteins in 3186 species: Archae - 589; Bacteria - 20345; Metazoa - 13239; Fungi - 7387; Plants - 3446; Viruses - 273; Other Eukaryotes - 14804 (source: NCBI BLink). & (q41382|rh7_spiol : 102.0) DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) & (reliability: 840.0) &  (original description: no original description)","protein_coding"
"MA_10436537g0010","No alias","Picea abies","(at1g10930 : 901.0) DNA helicase involved in the maintenance of genome stability by modulation of the DNA damage response and suppression of homologous recombination.; RECQ4A; FUNCTIONS IN: helicase activity, ATP-dependent 3'-5' DNA helicase activity, ATP-dependent helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: chromosome organization, response to DNA damage stimulus, double-strand break repair via homologous recombination; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RQC domain (InterPro:IPR018982), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Helicase/RNase D C-terminal, HRDC domain (InterPro:IPR002121); BEST Arabidopsis thaliana protein match is: RECQ helicase L4B (TAIR:AT1G60930.1); Has 34923 Blast hits to 34782 proteins in 2821 species: Archae - 633; Bacteria - 21324; Metazoa - 3687; Fungi - 2728; Plants - 1606; Viruses - 18; Other Eukaryotes - 4927 (source: NCBI BLink). & (reliability: 1802.0) &  (original description: no original description)","protein_coding"
"MA_10436572g0010","No alias","Picea abies","(at4g01020 : 1353.0) helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related; FUNCTIONS IN: in 6 functions; LOCATED IN: intracellular, chloroplast; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, RING-type, conserved site (InterPro:IPR017907), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841), K Homology (InterPro:IPR004087), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, C2H2-type (InterPro:IPR007087), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related (TAIR:AT5G10370.1); Has 13197 Blast hits to 12409 proteins in 1676 species: Archae - 4; Bacteria - 3384; Metazoa - 3503; Fungi - 1989; Plants - 1444; Viruses - 760; Other Eukaryotes - 2113 (source: NCBI BLink). & (reliability: 2700.0) &  (original description: no original description)","protein_coding"
"MA_10437125g0010","No alias","Picea abies","(at3g06980 : 540.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RH39 (TAIR:AT4G09730.1); Has 36871 Blast hits to 36254 proteins in 2997 species: Archae - 517; Bacteria - 17572; Metazoa - 5953; Fungi - 4324; Plants - 2343; Viruses - 14; Other Eukaryotes - 6148 (source: NCBI BLink). & (p46942|db10_nicsy : 109.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1080.0) &  (original description: no original description)","protein_coding"
"MA_10437218g0020","No alias","Picea abies","(at1g59990 : 318.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G40700.1); Has 57869 Blast hits to 34290 proteins in 2955 species: Archae - 517; Bacteria - 30307; Metazoa - 8550; Fungi - 6961; Plants - 3872; Viruses - 6; Other Eukaryotes - 7656 (source: NCBI BLink). & (reliability: 636.0) &  (original description: no original description)","protein_coding"
"MA_104828g0010","No alias","Picea abies","(at1g77030 : 649.0) hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides;ATP-dependent helicases;nucleic acid binding;ATP binding;RNA binding;helicases; FUNCTIONS IN: in 6 functions; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DBP10CT (InterPro:IPR012541), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 42888 Blast hits to 42073 proteins in 3063 species: Archae - 831; Bacteria - 21864; Metazoa - 5973; Fungi - 4375; Plants - 2654; Viruses - 31; Other Eukaryotes - 7160 (source: NCBI BLink). & (p46942|db10_nicsy : 194.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1298.0) &  (original description: no original description)","protein_coding"
"MA_109115g0010","No alias","Picea abies","(at2g16390 : 343.0) Putative chromatin remodeling protein, member of a plant-specific subfamily of SWI2/SNF2-like proteins.  Mutations nearly eliminate non-CpG methylation at a target promoter but do not affect rDNA or centromere methylation.  Cooperates with PolIVb to facilitate RNA-directed de novo methylation and silencing of homologous DNA.  Endogenous targets include intergenic regions near retrotransposon LTRs or short RNA encoding sequences that might epigenetically regulate adjacent genes.  May be used to establish a basal yet reversible level of silencing in euchromatin.; DEFECTIVE IN RNA-DIRECTED DNA METHYLATION 1 (DRD1); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; INVOLVED IN: DNA methylation, production of siRNA involved in RNA interference; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling 34 (TAIR:AT2G21450.1); Has 13448 Blast hits to 11886 proteins in 1506 species: Archae - 91; Bacteria - 3564; Metazoa - 3285; Fungi - 3284; Plants - 1229; Viruses - 105; Other Eukaryotes - 1890 (source: NCBI BLink). & (reliability: 686.0) &  (original description: no original description)","protein_coding"
"MA_110853g0010","No alias","Picea abies","(at5g51280 : 538.0) DEAD-box protein abstrakt, putative; FUNCTIONS IN: helicase activity, zinc ion binding, ATP-dependent helicase activity, nucleic acid binding, ATP binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, CCHC-type (InterPro:IPR001878), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT4G33370.1); Has 46358 Blast hits to 45535 proteins in 3129 species: Archae - 906; Bacteria - 23651; Metazoa - 6388; Fungi - 4930; Plants - 2690; Viruses - 10; Other Eukaryotes - 7783 (source: NCBI BLink). & (p46942|db10_nicsy : 186.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1076.0) &  (original description: no original description)","protein_coding"
"MA_111652g0010","No alias","Picea abies","(at5g22750 : 1161.0) DNA repair gene. gamma-radiation hypersensitive (RAD5) involved in stable transformation and T-DNA transfer; RAD5; FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA mediated transformation; EXPRESSED IN: embryo, sperm cell, seed; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), HIP116, Rad5p N-terminal (InterPro:IPR014905), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Helicase protein with RING/U-box domain (TAIR:AT5G43530.1); Has 27107 Blast hits to 18179 proteins in 1771 species: Archae - 108; Bacteria - 7266; Metazoa - 8140; Fungi - 5089; Plants - 2446; Viruses - 173; Other Eukaryotes - 3885 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 99.4) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 2118.0) &  (original description: no original description)","protein_coding"
"MA_135845g0010","No alias","Picea abies","(at3g09720 : 196.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, nucleic acid binding, ATP binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 47831 Blast hits to 47082 proteins in 3124 species: Archae - 967; Bacteria - 25249; Metazoa - 6167; Fungi - 4801; Plants - 2681; Viruses - 34; Other Eukaryotes - 7932 (source: NCBI BLink). & (reliability: 392.0) &  (original description: no original description)","protein_coding"
"MA_137324g0010","No alias","Picea abies","(at2g42520 : 769.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT3G58510.3); Has 140248 Blast hits to 67514 proteins in 3679 species: Archae - 1004; Bacteria - 58923; Metazoa - 37605; Fungi - 9665; Plants - 13202; Viruses - 1099; Other Eukaryotes - 18750 (source: NCBI BLink). & (p46942|db10_nicsy : 333.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1538.0) &  (original description: no original description)","protein_coding"
"MA_139472g0010","No alias","Picea abies","(at3g54280 : 246.0) ROOT GROWTH DEFECTIVE 3 (RGD3); FUNCTIONS IN: helicase activity, binding, DNA binding, nucleic acid binding, ATP binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), DEAD-like helicase, N-terminal (InterPro:IPR014001), Armadillo-type fold (InterPro:IPR016024), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT3G06010.1). & (reliability: 492.0) &  (original description: no original description)","protein_coding"
"MA_15897g0010","No alias","Picea abies","(at1g05490 : 435.0) chromatin remodeling 31 (chr31); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling 40 (TAIR:AT3G24340.1); Has 38115 Blast hits to 26256 proteins in 2107 species: Archae - 207; Bacteria - 10267; Metazoa - 11226; Fungi - 5719; Plants - 1929; Viruses - 244; Other Eukaryotes - 8523 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 92.4) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 838.0) &  (original description: no original description)","protein_coding"
"MA_171809g0010","No alias","Picea abies","(at3g53110 : 160.0) Encodes a putative DEAD-Box RNA Helicase and has RNA-dependent ATPase activity. Mutant is Sensitive to chilling stress and heat stress. Germination of the mutant is inhibited by ABA. LOS4 may be involved in temperature sensing. Is enriched in the nuclear envelope and also located in the cytoplasm. LOS4 is involved in export of poly A RNA.; LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 4 (LOS4); FUNCTIONS IN: RNA helicase activity, RNA-dependent ATPase activity, ATP-dependent helicase activity; INVOLVED IN: poly(A)+ mRNA export from nucleus, response to cold, response to heat, response to abscisic acid stimulus; LOCATED IN: nuclear envelope, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eukaryotic initiation factor 4A-III (TAIR:AT3G19760.1); Has 40925 Blast hits to 40635 proteins in 3033 species: Archae - 702; Bacteria - 21081; Metazoa - 5720; Fungi - 4311; Plants - 2419; Viruses - 28; Other Eukaryotes - 6664 (source: NCBI BLink). & (p41380|if4a3_nicpl : 113.0) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 320.0) &  (original description: no original description)","protein_coding"
"MA_175476g0010","No alias","Picea abies","(at1g20920 : 1078.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G09620.1); Has 45185 Blast hits to 44279 proteins in 3076 species: Archae - 794; Bacteria - 22443; Metazoa - 6674; Fungi - 4936; Plants - 2699; Viruses - 11; Other Eukaryotes - 7628 (source: NCBI BLink). & (p46942|db10_nicsy : 315.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1978.0) &  (original description: no original description)","protein_coding"
"MA_181586g0010","No alias","Picea abies","(at3g58570 : 728.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G42520.1); Has 86488 Blast hits to 59724 proteins in 3531 species: Archae - 886; Bacteria - 35070; Metazoa - 23291; Fungi - 6787; Plants - 8100; Viruses - 385; Other Eukaryotes - 11969 (source: NCBI BLink). & (p46942|db10_nicsy : 325.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1456.0) &  (original description: no original description)","protein_coding"
"MA_181920g0010","No alias","Picea abies","(at3g58570 : 433.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G42520.1); Has 86488 Blast hits to 59724 proteins in 3531 species: Archae - 886; Bacteria - 35070; Metazoa - 23291; Fungi - 6787; Plants - 8100; Viruses - 385; Other Eukaryotes - 11969 (source: NCBI BLink). & (p46942|db10_nicsy : 217.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 866.0) &  (original description: no original description)","protein_coding"
"MA_185116g0020","No alias","Picea abies","(at5g39840 : 655.0) ATP-dependent RNA helicase, mitochondrial, putative; FUNCTIONS IN: helicase activity, ATP-dependent RNA helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial degradasome RNA helicase subunit C-terminal (InterPro:IPR022192), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, mitochondrial (SUV3) (TAIR:AT4G14790.1); Has 4068 Blast hits to 4044 proteins in 754 species: Archae - 43; Bacteria - 1236; Metazoa - 267; Fungi - 388; Plants - 157; Viruses - 16; Other Eukaryotes - 1961 (source: NCBI BLink). & (reliability: 1310.0) &  (original description: no original description)","protein_coding"
"MA_19015g0010","No alias","Picea abies","(at1g55150 : 695.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 46818 Blast hits to 45969 proteins in 3127 species: Archae - 940; Bacteria - 23848; Metazoa - 6439; Fungi - 4774; Plants - 2718; Viruses - 21; Other Eukaryotes - 8078 (source: NCBI BLink). & (p46942|db10_nicsy : 429.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1390.0) &  (original description: no original description)","protein_coding"
"MA_1954g0010","No alias","Picea abies","(p35683|if4a_orysa : 533.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Oryza sativa (Rice) & (at3g13920 : 527.0) eukaryotic translation initiation factor 4A-1; eukaryotic translation initiation factor 4A1 (EIF4A1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eif4a-2 (TAIR:AT1G54270.2). & (reliability: 1054.0) &  (original description: no original description)","protein_coding"
"MA_291146g0010","No alias","Picea abies","(at1g58060 : 342.0) RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase family protein (TAIR:AT1G58050.1); Has 14563 Blast hits to 8989 proteins in 1532 species: Archae - 4; Bacteria - 6119; Metazoa - 3212; Fungi - 1916; Plants - 1040; Viruses - 151; Other Eukaryotes - 2121 (source: NCBI BLink). & (reliability: 684.0) &  (original description: no original description)","protein_coding"
"MA_3312g0010","No alias","Picea abies","(at3g57300 : 1489.0) Encodes the Arabidopsis INO80 ortholog of the SWI/SNF ATPase family.  Functions as a positive regulator of DNA homologous recombination (HR).  In INO80 mutants, the HR frequency is reduced to 15% of that in the wild-type.  Mutation in INO80 does not affect sensitivity to genotoxic agents and efficiency of T-DNA integration.  INO80 was also shown to regulate a subset of the Arabidopsis transcriptome.; INO80 ortholog (INO80); FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: somatic cell DNA recombination, positive regulation of DNA repair, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA binding domain, INO80 (InterPro:IPR020838), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein (TAIR:AT3G12810.1). & (q7g8y3|isw2_orysa : 237.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 2978.0) &  (original description: no original description)","protein_coding"
"MA_34468g0010","No alias","Picea abies","(at3g62310 : 1196.0) RNA helicase family protein; FUNCTIONS IN: RNA helicase activity, helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase family protein (TAIR:AT2G47250.1); Has 10517 Blast hits to 9531 proteins in 1639 species: Archae - 4; Bacteria - 3473; Metazoa - 2472; Fungi - 1291; Plants - 883; Viruses - 640; Other Eukaryotes - 1754 (source: NCBI BLink). & (reliability: 2392.0) &  (original description: no original description)","protein_coding"
"MA_36244g0010","No alias","Picea abies","(at3g42670 : 469.0) Encodes a nuclear localized SNF domain containing protein involved in RNA silencing. Mutants were identified in a screen for defects in the spread of RNA silencing. CLSY1 may affect production of dsRNA from the locus to be silenced.; chromatin remodeling 38 (CHR38); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; INVOLVED IN: gene silencing by RNA; LOCATED IN: nucleolus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling 42 (TAIR:AT5G20420.1); Has 13835 Blast hits to 12445 proteins in 1668 species: Archae - 89; Bacteria - 4181; Metazoa - 3164; Fungi - 3150; Plants - 1308; Viruses - 62; Other Eukaryotes - 1881 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 91.7) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 938.0) &  (original description: no original description)","protein_coding"
"MA_37913g0010","No alias","Picea abies","(at1g20920 : 962.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G09620.1); Has 45185 Blast hits to 44279 proteins in 3076 species: Archae - 794; Bacteria - 22443; Metazoa - 6674; Fungi - 4936; Plants - 2699; Viruses - 11; Other Eukaryotes - 7628 (source: NCBI BLink). & (p46942|db10_nicsy : 309.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1752.0) &  (original description: no original description)","protein_coding"
"MA_42020g0010","No alias","Picea abies","(at1g05120 : 343.0) Helicase protein with RING/U-box domain; FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G02670.1); Has 29218 Blast hits to 14448 proteins in 1607 species: Archae - 124; Bacteria - 8622; Metazoa - 6656; Fungi - 6694; Plants - 2674; Viruses - 189; Other Eukaryotes - 4259 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 95.9) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 686.0) &  (original description: no original description)","protein_coding"
"MA_42406g0010","No alias","Picea abies","(at5g66750 : 700.0) Protein is similar to SWI2/SNF2 chromatin remodeling proteins. DDM1 is appears to act as a chromatin-remodeling ATPase involved in cytosine methylation in CG and non-CG contexts. Involved in gene silencing and maintenance of DNA methylation and histone methylation. Hypomethylation of many genomic regions occurs in ddm1 mutants, and can cause several phenotypic abnormalities, but some loci, such as BONSAI (At1g73177) can be hypermethylated in ddm1 mutants after several generations, leading to different phenotypes. DDM1 might be involved in establishing a heterochromain boundary. A line expressing an RNAi targeted against DDM1  shows some resistance to agrobacterium-mediated root transformation.; chromatin remodeling 1 (CHR1); FUNCTIONS IN: helicase activity, ATPase activity; INVOLVED IN: methylation-dependent chromatin silencing, DNA mediated transformation, transposition, RNA-mediated; LOCATED IN: nucleosome; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor17 (TAIR:AT5G18620.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 376.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1400.0) &  (original description: no original description)","protein_coding"
"MA_495935g0010","No alias","Picea abies","(at1g12770 : 514.0) Encodes a DEAD-box RNA helicase that  localizes to mitochondria and is essential for regulating cell-to-cell transport via plasmodesmata.; embryo defective 1586 (EMB1586); FUNCTIONS IN: RNA helicase activity; INVOLVED IN: plasmodesma organization, plasmodesmata-mediated intercellular transport, embryo development ending in seed dormancy; LOCATED IN: mitochondrion; EXPRESSED IN: embryo, root, flower, shoot meristem; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 38833 Blast hits to 38121 proteins in 2993 species: Archae - 753; Bacteria - 18819; Metazoa - 5837; Fungi - 4441; Plants - 2445; Viruses - 12; Other Eukaryotes - 6526 (source: NCBI BLink). & (p41378|if4a_wheat : 141.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Triticum aestivum (Wheat) & (reliability: 1028.0) &  (original description: no original description)","protein_coding"
"MA_50249g0010","No alias","Picea abies","(at2g47330 : 714.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G20920.1); Has 46798 Blast hits to 46047 proteins in 3085 species: Archae - 817; Bacteria - 24489; Metazoa - 6167; Fungi - 4661; Plants - 2616; Viruses - 11; Other Eukaryotes - 8037 (source: NCBI BLink). & (p46942|db10_nicsy : 291.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1428.0) &  (original description: no original description)","protein_coding"
"MA_50378g0010","No alias","Picea abies","(p35683|if4a_orysa : 702.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Oryza sativa (Rice) & (at1g54270 : 697.0) member of eIF4A - eukaryotic initiation factor 4A; eif4a-2 (EIF4A-2); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 4A1 (TAIR:AT3G13920.4). & (reliability: 1394.0) &  (original description: no original description)","protein_coding"
"MA_53208g0010","No alias","Picea abies","(at1g61140 : 165.0) embryo sac development arrest 16 (EDA16); FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, ATP binding, nucleic acid binding; INVOLVED IN: embryo sac development; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related (TAIR:AT1G11100.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 330.0) &  (original description: no original description)","protein_coding"
"MA_5383g0010","No alias","Picea abies","(at5g13010 : 928.0) embryo defective 3011 (EMB3011); FUNCTIONS IN: RNA helicase activity, helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, putative (TAIR:AT3G26560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1856.0) &  (original description: no original description)","protein_coding"
"MA_5486g0010","No alias","Picea abies","(p41380|if4a3_nicpl : 712.0) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at3g19760 : 686.0) Encodes an RNA helicase that may be a component of the Exon Junction Complex. Subcellular localization is modulated by stress. Under normal conditions it is localized to the nuceloplasm but under hyopoxic conditions it localizes to the nucleolus and splicing speckles.; eukaryotic initiation factor 4A-III (EIF4A-III); FUNCTIONS IN: protein binding, ATP-dependent helicase activity; INVOLVED IN: mRNA processing, response to hypoxia; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G51380.1); Has 50040 Blast hits to 49280 proteins in 3163 species: Archae - 836; Bacteria - 27183; Metazoa - 6400; Fungi - 4843; Plants - 2693; Viruses - 42; Other Eukaryotes - 8043 (source: NCBI BLink). & (reliability: 1372.0) &  (original description: no original description)","protein_coding"
"MA_64225g0010","No alias","Picea abies","(at3g54460 : 1196.0) SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein; FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, nucleic acid binding, ATP binding; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), SNF2-related (InterPro:IPR000330), F-box domain, Skp2-like (InterPro:IPR022364), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: DNA/RNA helicase protein (TAIR:AT5G22750.1); Has 15028 Blast hits to 11196 proteins in 1367 species: Archae - 59; Bacteria - 4030; Metazoa - 3400; Fungi - 4173; Plants - 1458; Viruses - 121; Other Eukaryotes - 1787 (source: NCBI BLink). & (reliability: 2392.0) &  (original description: no original description)","protein_coding"
"MA_6982814g0010","No alias","Picea abies","(at3g58570 : 409.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G42520.1); Has 86488 Blast hits to 59724 proteins in 3531 species: Archae - 886; Bacteria - 35070; Metazoa - 23291; Fungi - 6787; Plants - 8100; Viruses - 385; Other Eukaryotes - 11969 (source: NCBI BLink). & (p46942|db10_nicsy : 204.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 818.0) &  (original description: no original description)","protein_coding"
"MA_7069g0010","No alias","Picea abies","(at4g00660 : 734.0) RNAhelicase-like 8 (RH8); FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: viral reproduction, virus-host interaction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G45810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p41380|if4a3_nicpl : 277.0) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 1468.0) &  (original description: no original description)","protein_coding"
"MA_7584105g0010","No alias","Picea abies","(at3g53110 : 160.0) Encodes a putative DEAD-Box RNA Helicase and has RNA-dependent ATPase activity. Mutant is Sensitive to chilling stress and heat stress. Germination of the mutant is inhibited by ABA. LOS4 may be involved in temperature sensing. Is enriched in the nuclear envelope and also located in the cytoplasm. LOS4 is involved in export of poly A RNA.; LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 4 (LOS4); FUNCTIONS IN: RNA helicase activity, RNA-dependent ATPase activity, ATP-dependent helicase activity; INVOLVED IN: poly(A)+ mRNA export from nucleus, response to cold, response to heat, response to abscisic acid stimulus; LOCATED IN: nuclear envelope, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eukaryotic initiation factor 4A-III (TAIR:AT3G19760.1); Has 40925 Blast hits to 40635 proteins in 3033 species: Archae - 702; Bacteria - 21081; Metazoa - 5720; Fungi - 4311; Plants - 2419; Viruses - 28; Other Eukaryotes - 6664 (source: NCBI BLink). & (p41380|if4a3_nicpl : 113.0) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 320.0) &  (original description: no original description)","protein_coding"
"MA_77097g0010","No alias","Picea abies","(at3g06010 : 290.0) Encodes AtCHR12, a SNF2/Brahma-type chromatin-remodeling protein.  AtCHR12 mediates temporary growth arrest in Arabidopsis upon perceiving environmental stress.; ATCHR12; FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: response to water deprivation, response to salt stress, response to heat; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT5G19310.1); Has 23556 Blast hits to 19403 proteins in 2220 species: Archae - 141; Bacteria - 6122; Metazoa - 5759; Fungi - 4503; Plants - 1859; Viruses - 268; Other Eukaryotes - 4904 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 119.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 580.0) &  (original description: no original description)","protein_coding"
"MA_8723931g0010","No alias","Picea abies","(at5g13010 : 928.0) embryo defective 3011 (EMB3011); FUNCTIONS IN: RNA helicase activity, helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, putative (TAIR:AT3G26560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1856.0) &  (original description: no original description)","protein_coding"
"MA_881548g0010","No alias","Picea abies","(at1g55150 : 614.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 46818 Blast hits to 45969 proteins in 3127 species: Archae - 940; Bacteria - 23848; Metazoa - 6439; Fungi - 4774; Plants - 2718; Viruses - 21; Other Eukaryotes - 8078 (source: NCBI BLink). & (p46942|db10_nicsy : 396.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1228.0) &  (original description: no original description)","protein_coding"
"MA_8870g0010","No alias","Picea abies","(at1g61140 : 254.0) embryo sac development arrest 16 (EDA16); FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, ATP binding, nucleic acid binding; INVOLVED IN: embryo sac development; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related (TAIR:AT1G11100.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 88.6) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 508.0) &  (original description: no original description)","protein_coding"
"MA_8908510g0010","No alias","Picea abies","(p41380|if4a3_nicpl : 204.0) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at3g19760 : 197.0) Encodes an RNA helicase that may be a component of the Exon Junction Complex. Subcellular localization is modulated by stress. Under normal conditions it is localized to the nuceloplasm but under hyopoxic conditions it localizes to the nucleolus and splicing speckles.; eukaryotic initiation factor 4A-III (EIF4A-III); FUNCTIONS IN: protein binding, ATP-dependent helicase activity; INVOLVED IN: mRNA processing, response to hypoxia; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G51380.1); Has 50040 Blast hits to 49280 proteins in 3163 species: Archae - 836; Bacteria - 27183; Metazoa - 6400; Fungi - 4843; Plants - 2693; Viruses - 42; Other Eukaryotes - 8043 (source: NCBI BLink). & (reliability: 394.0) &  (original description: no original description)","protein_coding"
"MA_9061907g0010","No alias","Picea abies","(at1g55150 : 119.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 46818 Blast hits to 45969 proteins in 3127 species: Archae - 940; Bacteria - 23848; Metazoa - 6439; Fungi - 4774; Plants - 2718; Viruses - 21; Other Eukaryotes - 8078 (source: NCBI BLink). & (p46942|db10_nicsy : 83.6) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 238.0) &  (original description: no original description)","protein_coding"
"MA_9480g0010","No alias","Picea abies","(at4g15850 : 295.0) plant DEAD box-like RNA helicase.; RNA helicase 1 (RH1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT4G16630.1); Has 38711 Blast hits to 38056 proteins in 2969 species: Archae - 603; Bacteria - 19125; Metazoa - 5736; Fungi - 4393; Plants - 2535; Viruses - 13; Other Eukaryotes - 6306 (source: NCBI BLink). & (reliability: 590.0) &  (original description: no original description)","protein_coding"
"MA_9571818g0010","No alias","Picea abies","(at1g55150 : 119.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 46818 Blast hits to 45969 proteins in 3127 species: Archae - 940; Bacteria - 23848; Metazoa - 6439; Fungi - 4774; Plants - 2718; Viruses - 21; Other Eukaryotes - 8078 (source: NCBI BLink). & (p46942|db10_nicsy : 85.9) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 238.0) &  (original description: no original description)","protein_coding"
"MA_99733g0010","No alias","Picea abies","(at5g11170 : 745.0) DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; INVOLVED IN: response to cadmium ion; LOCATED IN: nucleolus; EXPRESSED IN: guard cell, root, cultured cell; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box RNA helicase family protein  (TAIR:AT5G11200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p41378|if4a_wheat : 240.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Triticum aestivum (Wheat) & (reliability: 1490.0) &  (original description: no original description)","protein_coding"
"Mp1g02350.1","No alias","Marchantia polymorpha","RNA helicase (Sub2). helicase component UAP56 of TREX/THO mRNP trafficking complex","protein_coding"
"Mp1g02820.1","No alias","Marchantia polymorpha","chromatin remodeling factor (SMARCAL1)","protein_coding"
"Mp1g02840.1","No alias","Marchantia polymorpha","endoribonuclease (DCL3). endoribonuclease (DCL4)","protein_coding"
"Mp1g05480.1","No alias","Marchantia polymorpha","chromatin remodeling factor (Chd1). component CHR5 of SAGA transcription co-activator complex","protein_coding"
"Mp1g05800.1","No alias","Marchantia polymorpha","DEAD-box ATP-dependent RNA helicase 21 OS=Arabidopsis thaliana (sp|p93008|rh21_arath : 197.0)","protein_coding"
"Mp1g06410.1","No alias","Marchantia polymorpha","Protein CHROMATIN REMODELING 35 OS=Arabidopsis thaliana (sp|q9siw2|chr35_arath : 328.0)","protein_coding"
"Mp1g06750.1","No alias","Marchantia polymorpha","RNA helicase (Prp5)","protein_coding"
"Mp1g06890.1","No alias","Marchantia polymorpha","RNA helicase (Brr2)","protein_coding"
"Mp1g08410.1","No alias","Marchantia polymorpha","chromatin remodeling factor (ERCC6). DNA repair protein (CSB)","protein_coding"
"Mp1g11040.1","No alias","Marchantia polymorpha","SNF2 domain-containing protein CLASSY 2 OS=Arabidopsis thaliana (sp|f4k493|clsy2_arath : 365.0)","protein_coding"
"Mp1g17010.1","No alias","Marchantia polymorpha","chromatin remodeling factor (Snf2)","protein_coding"
"Mp1g18560.1","No alias","Marchantia polymorpha","CHD3-type chromatin-remodeling factor PICKLE OS=Arabidopsis thaliana (sp|q9s775|pkl_arath : 432.0)","protein_coding"
"Mp1g19410.1","No alias","Marchantia polymorpha","SSU processome assembly factor (SWA3)","protein_coding"
"Mp1g21130.1","No alias","Marchantia polymorpha","helicase Prp43 of Intron-Lariat Spliceosome complex","protein_coding"
"Mp1g21370.1","No alias","Marchantia polymorpha","DNA translocase component FANCM of FANCM-MHF DNA remodeling complex","protein_coding"
"Mp1g21580.1","No alias","Marchantia polymorpha","RNA helicase (Prp28)","protein_coding"
"Mp1g25330.1","No alias","Marchantia polymorpha","DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis thaliana (sp|q8h136|rh14_arath : 536.0)","protein_coding"
"Mp1g26000.1","No alias","Marchantia polymorpha","chromatin remodeling factor (Rad5)","protein_coding"
"Mp1g27560.1","No alias","Marchantia polymorpha","DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis thaliana (sp|f4hyj7|dexh3_arath : 1151.0)","protein_coding"
"Mp1g29760.1","No alias","Marchantia polymorpha","chromatin remodeling factor (ERCC6)","protein_coding"
"Mp2g02390.1","No alias","Marchantia polymorpha","Mediator of RNA polymerase II transcription subunit 34 OS=Arabidopsis thaliana (sp|q9ft73|med34_arath : 292.0)","protein_coding"
"Mp2g02760.1","No alias","Marchantia polymorpha","mRNA unwinding factor (eIF4A)","protein_coding"
"Mp2g05860.1","No alias","Marchantia polymorpha","chromatin remodeling factor (SHPRH)","protein_coding"
"Mp2g07080.1","No alias","Marchantia polymorpha","DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa subsp. japonica (sp|q650t9|rh7_orysj : 671.0)","protein_coding"
"Mp2g07230.1","No alias","Marchantia polymorpha","ATP-dependent DNA helicase At3g02060, chloroplastic OS=Arabidopsis thaliana (sp|f4jfj3|y3206_arath : 869.0)","protein_coding"
"Mp2g08020.1","No alias","Marchantia polymorpha","DEAD-box ATP-dependent RNA helicase 52B OS=Oryza sativa subsp. japonica (sp|q6z4k6|rh52b_orysj : 691.0)","protein_coding"
"Mp2g13680.1","No alias","Marchantia polymorpha","Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Arabidopsis thaliana (sp|q38953|deah5_arath : 1533.0)","protein_coding"
"Mp2g14200.1","No alias","Marchantia polymorpha","chromatin remodeling factor (ERCC6)","protein_coding"
"Mp2g16530.1","No alias","Marchantia polymorpha","DEAD-box ATP-dependent RNA helicase 47A OS=Oryza sativa subsp. japonica (sp|q6h874|rh47a_orysj : 463.0)","protein_coding"
"Mp2g26680.1","No alias","Marchantia polymorpha","CHD3-type chromatin-remodeling factor PICKLE OS=Arabidopsis thaliana (sp|q9s775|pkl_arath : 424.0)","protein_coding"
"Mp3g02150.1","No alias","Marchantia polymorpha","DExH-box ATP-dependent RNA helicase DExH6 OS=Arabidopsis thaliana (sp|f4iny4|hvt1_arath : 1025.0)","protein_coding"
"Mp3g07940.1","No alias","Marchantia polymorpha","pre-mRNA splicing regulator (DDX5)","protein_coding"
"Mp3g15030.1","No alias","Marchantia polymorpha","chromatin remodeling factor (Iswi)","protein_coding"
"Mp3g17170.1","No alias","Marchantia polymorpha","RH3 plastidial RNA basal splicing factor. RNA helicase (PMH)","protein_coding"
"Mp3g17320.1","No alias","Marchantia polymorpha","Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 OS=Arabidopsis thaliana (sp|q93y16|deah4_arath : 747.0)","protein_coding"
"Mp3g19430.1","No alias","Marchantia polymorpha","chromatin remodeling factor (Alc)","protein_coding"
"Mp3g20650.1","No alias","Marchantia polymorpha","DEAD-box ATP-dependent RNA helicase 1 OS=Arabidopsis thaliana (sp|q7fgz2|rh1_arath : 490.0)","protein_coding"
"Mp3g22370.1","No alias","Marchantia polymorpha","DNA translocase (RecG)","protein_coding"
"Mp4g00040.1","No alias","Marchantia polymorpha","chromatin remodeling factor (Chd3/Mi-2)","protein_coding"
"Mp4g00540.1","No alias","Marchantia polymorpha","component MED34 of MEDIATOR transcription co-activator complex","protein_coding"
"Mp4g00850.1","No alias","Marchantia polymorpha","DEAD-box ATP-dependent RNA helicase 58, chloroplastic OS=Oryza sativa subsp. japonica (sp|q0jfn7|rh58_orysj : 397.0)","protein_coding"
"Mp4g02260.1","No alias","Marchantia polymorpha","DExH-box ATP-dependent RNA helicase DExH8 OS=Arabidopsis thaliana (sp|o22243|c3h31_arath : 639.0)","protein_coding"
"Mp4g02780.1","No alias","Marchantia polymorpha","Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 OS=Arabidopsis thaliana (sp|f4jrj6|deah9_arath : 830.0)","protein_coding"
"Mp4g03900.1","No alias","Marchantia polymorpha","RNA helicase component MTR4/HEN2 of Nuclear Exosome Targeting (NEXT) activation complex","protein_coding"
"Mp4g04560.1","No alias","Marchantia polymorpha","ATP-dependent RNA helicase DEAH13 OS=Arabidopsis thaliana (sp|q9c813|deahd_arath : 654.0)","protein_coding"
"Mp4g08260.1","No alias","Marchantia polymorpha","DEAD-box ATP-dependent RNA helicase 30 OS=Arabidopsis thaliana (sp|q8w4r3|rh30_arath : 117.0)","protein_coding"
"Mp4g09280.1","No alias","Marchantia polymorpha","Protein CHROMATIN REMODELING 35 OS=Arabidopsis thaliana (sp|q9siw2|chr35_arath : 282.0)","protein_coding"
"Mp4g09540.1","No alias","Marchantia polymorpha","helicase component eIF4A3 of RNA quality control Exon Junction complex","protein_coding"
"Mp4g12200.1","No alias","Marchantia polymorpha","chromatin remodeling factor (DDM1)","protein_coding"
"Mp4g12240.1","No alias","Marchantia polymorpha","DEAD-box ATP-dependent RNA helicase 24 OS=Arabidopsis thaliana (sp|o22907|rh24_arath : 834.0)","protein_coding"
"Mp4g13200.1","No alias","Marchantia polymorpha","DEAD-box ATP-dependent RNA helicase 1 OS=Arabidopsis thaliana (sp|q7fgz2|rh1_arath : 134.0)","protein_coding"
"Mp4g13210.1","No alias","Marchantia polymorpha","DEAD-box ATP-dependent RNA helicase 1 OS=Arabidopsis thaliana (sp|q7fgz2|rh1_arath : 141.0)","protein_coding"
"Mp4g13330.1","No alias","Marchantia polymorpha","DEAD-box ATP-dependent RNA helicase 1 OS=Arabidopsis thaliana (sp|q7fgz2|rh1_arath : 147.0)","protein_coding"
"Mp4g14290.1","No alias","Marchantia polymorpha","helicase component RecQ4A of RTR Holliday junction dissolution complex","protein_coding"
"Mp4g16380.1","No alias","Marchantia polymorpha","RNA helicase (Prp2)","protein_coding"
"Mp4g16510.1","No alias","Marchantia polymorpha","ATP-dependent DNA helicase Q-like 1 OS=Arabidopsis thaliana (sp|q9ft74|rql1_arath : 617.0)","protein_coding"
"Mp4g18940.1","No alias","Marchantia polymorpha","RNA helicase (Prp22)","protein_coding"
"Mp4g18960.1","No alias","Marchantia polymorpha","DEAD-box ATP-dependent RNA helicase 35 OS=Arabidopsis thaliana (sp|q9lu46|rh35_arath : 914.0)","protein_coding"
"Mp4g19670.1","No alias","Marchantia polymorpha","Protein CHROMATIN REMODELING 35 OS=Arabidopsis thaliana (sp|q9siw2|chr35_arath : 324.0)","protein_coding"
"Mp4g20180.1","No alias","Marchantia polymorpha","DEAD-box ATP-dependent RNA helicase 10 OS=Arabidopsis thaliana (sp|q8gy84|rh10_arath : 541.0)","protein_coding"
"Mp4g21330.1","No alias","Marchantia polymorpha","DEAD-box ATP-dependent RNA helicase 28 OS=Oryza sativa subsp. japonica (sp|q0inc5|rh28_orysj : 648.0)","protein_coding"
"Mp4g22900.1","No alias","Marchantia polymorpha","DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis thaliana (sp|q8h136|rh14_arath : 617.0)","protein_coding"
"Mp5g03860.1","No alias","Marchantia polymorpha","DEAD-box ATP-dependent RNA helicase 13 OS=Oryza sativa subsp. japonica (sp|a3avh5|rh13_orysj : 583.0)","protein_coding"
"Mp5g04780.1","No alias","Marchantia polymorpha","DEAD-box ATP-dependent RNA helicase 18 OS=Arabidopsis thaliana (sp|q9flb0|rh18_arath : 608.0)","protein_coding"
"Mp5g06580.2","No alias","Marchantia polymorpha","chromatin remodeling factor (Snf2)","protein_coding"
"Mp5g09580.1","No alias","Marchantia polymorpha","DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa subsp. japonica (sp|q5vry0|rh39_orysj : 584.0)","protein_coding"
"Mp5g09990.1","No alias","Marchantia polymorpha","DExH-box ATP-dependent RNA helicase DExH7, chloroplastic OS=Arabidopsis thaliana (sp|f4i9q5|dexh7_arath : 1068.0)","protein_coding"
"Mp5g21000.1","No alias","Marchantia polymorpha","chromatin remodeling factor (ATRX)","protein_coding"
"Mp5g21170.1","No alias","Marchantia polymorpha","DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis thaliana (sp|f4ilr7|dexh1_arath : 541.0)","protein_coding"
"Mp5g21370.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp5g24460.1","No alias","Marchantia polymorpha","chromatin remodeling factor (Chd3/Mi-2)","protein_coding"
"Mp6g01600.1","No alias","Marchantia polymorpha","DExH-box ATP-dependent RNA helicase DExH18, mitochondrial OS=Arabidopsis thaliana (sp|f4kfv7|suv3l_arath : 796.0)","protein_coding"
"Mp6g02580.1","No alias","Marchantia polymorpha","DBP5/LOS4 ATP-dependent helicase","protein_coding"
"Mp6g05260.1","No alias","Marchantia polymorpha","DEAD-box ATP-dependent RNA helicase 17 OS=Oryza sativa subsp. japonica (sp|q0dlb9|rh17_orysj : 531.0)","protein_coding"
"Mp6g05780.1","No alias","Marchantia polymorpha","ATP-dependent DNA helicase Q-like 5 OS=Arabidopsis thaliana (sp|q0wvw7|rql5_arath : 606.0)","protein_coding"
"Mp6g05990.1","No alias","Marchantia polymorpha","DNA polymerase theta (TEB)","protein_coding"
"Mp6g06120.1","No alias","Marchantia polymorpha","chromatin remodeling factor (Rad54)","protein_coding"
"Mp6g10050.1","No alias","Marchantia polymorpha","DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis thaliana (sp|f4ilr7|dexh1_arath : 1204.0)","protein_coding"
"Mp6g12000.1","No alias","Marchantia polymorpha","DEAD-box ATP-dependent RNA helicase 41 OS=Oryza sativa subsp. japonica (sp|q0e2z7|rh41_orysj : 478.0)","protein_coding"
"Mp6g12400.1","No alias","Marchantia polymorpha","chromatin remodeling factor (SHPRH)","protein_coding"
"Mp6g12960.1","No alias","Marchantia polymorpha","DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis thaliana (sp|q8h136|rh14_arath : 546.0)","protein_coding"
"Mp6g18490.1","No alias","Marchantia polymorpha","chromatin remodeling factor (Mot1). TATA box-binding protein-associated factor (MOT1)","protein_coding"
"Mp6g19210.1","No alias","Marchantia polymorpha","DEAD-box ATP-dependent RNA helicase 5 OS=Arabidopsis thaliana (sp|q9c551|rh5_arath : 604.0)","protein_coding"
"Mp7g00250.1","No alias","Marchantia polymorpha","RNA helicase (Brr2)","protein_coding"
"Mp7g00430.1","No alias","Marchantia polymorpha","DEAD-box ATP-dependent RNA helicase 22 OS=Oryza sativa subsp. japonica (sp|q6h601|rh22_orysj : 423.0)","protein_coding"
"Mp7g01000.1","No alias","Marchantia polymorpha","E3 ubiquitin ligase (RBR-Helicase)","protein_coding"
"Mp7g03460.1","No alias","Marchantia polymorpha","RNA helicase (Prp16)","protein_coding"
"Mp7g04610.1","No alias","Marchantia polymorpha","DEAD-box ATP-dependent RNA helicase 16 OS=Oryza sativa subsp. japonica (sp|q6atj8|rh16_orysj : 544.0)","protein_coding"
"Mp7g07690.1","No alias","Marchantia polymorpha","rRNA biogenesis RNA helicase (ROK1)","protein_coding"
"Mp7g07730.1","No alias","Marchantia polymorpha","DEAD-box ATP-dependent RNA helicase 26 OS=Oryza sativa subsp. japonica (sp|q0jl73|rh26_orysj : 299.0)","protein_coding"
"Mp7g07740.1","No alias","Marchantia polymorpha","Probable DEAD-box ATP-dependent RNA helicase 48 OS=Arabidopsis thaliana (sp|q9c8s9|rh48_arath : 525.0)","protein_coding"
"Mp7g11720.1","No alias","Marchantia polymorpha","endoribonuclease (DCL3). endoribonuclease (DCL4)","protein_coding"
"Mp7g11900.1","No alias","Marchantia polymorpha","chromatin remodeling factor (Rad5-like)","protein_coding"
"Mp7g11930.1","No alias","Marchantia polymorpha","DEAD-box ATP-dependent RNA helicase 52A OS=Oryza sativa subsp. japonica (sp|q0db53|rh52a_orysj : 319.0)","protein_coding"
"Mp7g12090.1","No alias","Marchantia polymorpha","endoribonuclease component DCL1 of DCL1-HYL1 miRNA biogenesis complex","protein_coding"
"Mp7g12890.1","No alias","Marchantia polymorpha","DEAD-box ATP-dependent RNA helicase 27 OS=Oryza sativa subsp. japonica (sp|q84t03|rh27_orysj : 647.0)","protein_coding"
"Mp7g14570.1","No alias","Marchantia polymorpha","DEAD-box ATP-dependent RNA helicase 6 OS=Oryza sativa subsp. japonica (sp|q7xmk8|rh6_orysj : 768.0)","protein_coding"
"Mp7g15670.1","No alias","Marchantia polymorpha","ATPase component PIE1 of SWR1 chromatin remodeling complex","protein_coding"
"Mp7g16800.1","No alias","Marchantia polymorpha","ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis thaliana (sp|q9ft72|rql3_arath : 631.0)","protein_coding"
"Mp7g18590.1","No alias","Marchantia polymorpha","Putative DEAD-box ATP-dependent RNA helicase 29 OS=Arabidopsis thaliana (sp|o49289|rh29_arath : 773.0)","protein_coding"
"Mp8g00130.1","No alias","Marchantia polymorpha","ATPase component Ino80 of chromatin remodelling complex","protein_coding"
"Mp8g04910.1","No alias","Marchantia polymorpha","DEAD-box ATP-dependent RNA helicase 1 OS=Arabidopsis thaliana (sp|q7fgz2|rh1_arath : 149.0)","protein_coding"
"Mp8g05230.1","No alias","Marchantia polymorpha","chromatin remodeling factor (Ris1)","protein_coding"
"Mp8g08450.1","No alias","Marchantia polymorpha","chromatin remodeling factor (Etl1)","protein_coding"
"Mp8g10290.1","No alias","Marchantia polymorpha","DEAD-box ATP-dependent RNA helicase 32 OS=Arabidopsis thaliana (sp|q9fft9|rh32_arath : 623.0)","protein_coding"
"Mp8g11020.1","No alias","Marchantia polymorpha","DEAD-box ATP-dependent RNA helicase 50 OS=Arabidopsis thaliana (sp|q8gug7|rh50_arath : 441.0)","protein_coding"
"Mp8g13160.1","No alias","Marchantia polymorpha","DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis thaliana (sp|f4ilr7|dexh1_arath : 535.0)","protein_coding"
"Mp8g17660.1","No alias","Marchantia polymorpha","chromatin remodeling factor (Snf2)","protein_coding"
"Mpzg00070.1","No alias","Marchantia polymorpha","DEAD-box ATP-dependent RNA helicase 1 OS=Arabidopsis thaliana (sp|q7fgz2|rh1_arath : 119.0)","protein_coding"
"Potri.001G007900","No alias","Populus trichocarpa","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Potri.001G102501","No alias","Populus trichocarpa","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Potri.001G107300","No alias","Populus trichocarpa","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Potri.001G107900","No alias","Populus trichocarpa","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Potri.001G123400","No alias","Populus trichocarpa","chromatin remodeling 4","protein_coding"
"Potri.001G197900","No alias","Populus trichocarpa","eukaryotic translation initiation factor 4A1","protein_coding"
"Potri.001G207700","No alias","Populus trichocarpa","SNF2 domain-containing protein / helicase domain-containing protein","protein_coding"
"Potri.001G238100","No alias","Populus trichocarpa","helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related","protein_coding"
"Potri.001G250700","No alias","Populus trichocarpa","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Potri.001G253400","No alias","Populus trichocarpa","chromatin remodeling 5","protein_coding"
"Potri.001G347100","No alias","Populus trichocarpa","DEAD box RNA helicase family protein","protein_coding"
"Potri.001G348200","No alias","Populus trichocarpa","ATP binding;ATP-dependent helicases;DNA helicases","protein_coding"
"Potri.001G423300","No alias","Populus trichocarpa","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Potri.002G003600","No alias","Populus trichocarpa","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Potri.002G157500","No alias","Populus trichocarpa","RNAhelicase-like 8","protein_coding"
"Potri.002G160900","No alias","Populus trichocarpa","transcription regulatory protein SNF2, putative","protein_coding"
"Potri.002G169800","No alias","Populus trichocarpa","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Potri.002G181400","No alias","Populus trichocarpa","dicer-like 1","protein_coding"
"Potri.002G192500","No alias","Populus trichocarpa","RNA helicase family protein","protein_coding"
"Potri.002G194600","No alias","Populus trichocarpa","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Potri.002G201400","No alias","Populus trichocarpa","RNA helicase family protein","protein_coding"
"Potri.002G237400","No alias","Populus trichocarpa","DEAD/DEAH box helicase, putative","protein_coding"
"Potri.003G015800","No alias","Populus trichocarpa","DNA helicase (RECQl4A)","protein_coding"
"Potri.003G017500","No alias","Populus trichocarpa","DNA helicase (RECQl4A)","protein_coding"
"Potri.003G022100","No alias","Populus trichocarpa","SNF2 domain-containing protein / helicase domain-containing protein","protein_coding"
"Potri.003G036000","No alias","Populus trichocarpa","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Potri.003G038300","No alias","Populus trichocarpa","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Potri.003G043700","No alias","Populus trichocarpa","eukaryotic translation initiation factor 4A1","protein_coding"
"Potri.003G083400","No alias","Populus trichocarpa","Helicase protein with RING/U-box domain","protein_coding"
"Potri.003G098800","No alias","Populus trichocarpa","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Potri.003G104300","No alias","Populus trichocarpa","RECQ helicase L2","protein_coding"
"Potri.003G110100","No alias","Populus trichocarpa","chromatin remodeling 4","protein_coding"
"Potri.003G123600","No alias","Populus trichocarpa","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Potri.003G124100","No alias","Populus trichocarpa","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Potri.003G197700","No alias","Populus trichocarpa","SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein","protein_coding"
"Potri.003G217800","No alias","Populus trichocarpa","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Potri.004G037700","No alias","Populus trichocarpa","SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related","protein_coding"
"Potri.004G052700","No alias","Populus trichocarpa","RNA helicase family protein","protein_coding"
"Potri.004G141500","No alias","Populus trichocarpa","homolog of RAD54","protein_coding"
"Potri.004G158000","No alias","Populus trichocarpa","RNA helicase 1","protein_coding"
"Potri.004G159000","No alias","Populus trichocarpa","SNF2 domain-containing protein / helicase domain-containing protein","protein_coding"
"Potri.004G189400","No alias","Populus trichocarpa","DNA/RNA helicase protein","protein_coding"
"Potri.004G222900","No alias","Populus trichocarpa","RNA helicase family protein","protein_coding"
"Potri.004G224000","No alias","Populus trichocarpa","DEAD-box protein abstrakt, putative","protein_coding"
"Potri.004G228700","No alias","Populus trichocarpa","RNA helicase, ATP-dependent, SK12/DOB1 protein","protein_coding"
"Potri.005G000100","No alias","Populus trichocarpa","DEAD box RNA helicase (RH3)","protein_coding"
"Potri.005G000500","No alias","Populus trichocarpa","DEAD box RNA helicase (RH3)","protein_coding"
"Potri.005G019800","No alias","Populus trichocarpa","RECQ helicase l1","protein_coding"
"Potri.005G026400","No alias","Populus trichocarpa","RECQ helicase SIM","protein_coding"
"Potri.005G047250","No alias","Populus trichocarpa","DEAD-box protein abstrakt, putative","protein_coding"
"Potri.005G066600","No alias","Populus trichocarpa","chromatin remodeling 24","protein_coding"
"Potri.005G071500","No alias","Populus trichocarpa","helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related","protein_coding"
"Potri.005G093900","No alias","Populus trichocarpa","eukaryotic initiation factor 4A-III","protein_coding"
"Potri.005G107400","No alias","Populus trichocarpa","DEAD/DEAH box RNA helicase family protein","protein_coding"
"Potri.005G185900","No alias","Populus trichocarpa","hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides;ATP-dependent helicases;nucleic acid binding;ATP binding;RNA binding;helicases","protein_coding"
"Potri.005G198300","No alias","Populus trichocarpa","RH39","protein_coding"
"Potri.005G206500","No alias","Populus trichocarpa","helicase in vascular tissue and tapetum","protein_coding"
"Potri.005G226500","No alias","Populus trichocarpa","chromatin remodeling 8","protein_coding"
"Potri.005G241300","No alias","Populus trichocarpa","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Potri.005G257400","No alias","Populus trichocarpa","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Potri.006G024100","No alias","Populus trichocarpa","putative mitochondrial RNA helicase 2","protein_coding"
"Potri.006G035700","No alias","Populus trichocarpa","DNA/RNA helicase protein","protein_coding"
"Potri.006G047100","No alias","Populus trichocarpa","INO80 ortholog","protein_coding"
"Potri.006G078000","No alias","Populus trichocarpa","RNA helicase, ATP-dependent, SK12/DOB1 protein","protein_coding"
"Potri.006G119000","No alias","Populus trichocarpa","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Potri.006G188800","No alias","Populus trichocarpa","dicer-like 4","protein_coding"
"Potri.006G196000","No alias","Populus trichocarpa","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Potri.006G225700","No alias","Populus trichocarpa","eukaryotic translation initiation factor 4A1","protein_coding"
"Potri.006G249100","No alias","Populus trichocarpa","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Potri.006G253100","No alias","Populus trichocarpa","DEAD/DEAH box RNA helicase family protein","protein_coding"
"Potri.006G262200","No alias","Populus trichocarpa","chromatin remodeling factor CHD3 (PICKLE)","protein_coding"
"Potri.007G000700","No alias","Populus trichocarpa","SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related","protein_coding"
"Potri.007G021800","No alias","Populus trichocarpa","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Potri.007G026700","No alias","Populus trichocarpa","chromatin remodeling 1","protein_coding"
"Potri.007G068800","No alias","Populus trichocarpa","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Potri.007G070000","No alias","Populus trichocarpa","eukaryotic initiation factor 4A-III","protein_coding"
"Potri.007G102800","No alias","Populus trichocarpa","chromatin remodeling 24","protein_coding"
"Potri.008G014100","No alias","Populus trichocarpa","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Potri.008G073100","No alias","Populus trichocarpa","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Potri.008G073500","No alias","Populus trichocarpa","chromatin remodeling 42","protein_coding"
"Potri.008G075900","No alias","Populus trichocarpa","dicer-like 2","protein_coding"
"Potri.008G084700","No alias","Populus trichocarpa","RNA helicase 36","protein_coding"
"Potri.008G096800","No alias","Populus trichocarpa","RNA helicase family protein","protein_coding"
"Potri.008G149900","No alias","Populus trichocarpa","Homeotic gene regulator","protein_coding"
"Potri.008G173700","No alias","Populus trichocarpa","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Potri.008G193800","No alias","Populus trichocarpa","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Potri.008G195900","No alias","Populus trichocarpa","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Potri.008G205600","No alias","Populus trichocarpa","chromatin remodeling factor17","protein_coding"
"Potri.008G208900","No alias","Populus trichocarpa","hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides;ATP-dependent helicases;nucleic acid binding;ATP binding;RNA binding;helicases","protein_coding"
"Potri.009G045300","No alias","Populus trichocarpa","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Potri.009G047800","No alias","Populus trichocarpa","chromatin remodeling 5","protein_coding"
"Potri.009G120700","No alias","Populus trichocarpa","SNF2 domain-containing protein / helicase domain-containing protein","protein_coding"
"Potri.010G003300","No alias","Populus trichocarpa","chromatin remodeling factor18","protein_coding"
"Potri.010G004700","No alias","Populus trichocarpa","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Potri.010G019150","No alias","Populus trichocarpa","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Potri.010G019800","No alias","Populus trichocarpa","chromatin-remodeling protein 11","protein_coding"
"Potri.010G021400","No alias","Populus trichocarpa","chromatin-remodeling protein 11","protein_coding"
"Potri.010G056500","No alias","Populus trichocarpa","DEAD/DEAH box RNA helicase family protein","protein_coding"
"Potri.010G057200","No alias","Populus trichocarpa","RNA helicase family protein","protein_coding"
"Potri.010G063600","No alias","Populus trichocarpa","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Potri.010G084100","No alias","Populus trichocarpa","ATP-dependent RNA helicase, mitochondrial (SUV3)","protein_coding"
"Potri.010G091200","No alias","Populus trichocarpa","Homeotic gene regulator","protein_coding"
"Potri.010G092200","No alias","Populus trichocarpa","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Potri.010G112500","No alias","Populus trichocarpa","DEAD/DEAH box RNA helicase family protein","protein_coding"
"Potri.010G117800","No alias","Populus trichocarpa","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Potri.010G152400","No alias","Populus trichocarpa","DEAD box RNA helicase family protein","protein_coding"
"Potri.010G172500","No alias","Populus trichocarpa","RNA helicase family protein","protein_coding"
"Potri.010G181400","No alias","Populus trichocarpa","dicer-like 2","protein_coding"
"Potri.010G246000","No alias","Populus trichocarpa","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Potri.011G046400","No alias","Populus trichocarpa","SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related","protein_coding"
"Potri.012G034200","No alias","Populus trichocarpa","ATP-dependent RNA helicase, putative","protein_coding"
"Potri.012G045800","No alias","Populus trichocarpa","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Potri.012G063101","No alias","Populus trichocarpa","nucleic acid binding;ATP-dependent helicases;ATP binding;helicases;ATP-dependent helicases","protein_coding"
"Potri.012G063500","No alias","Populus trichocarpa","nucleic acid binding;ATP-dependent helicases;ATP binding;helicases;ATP-dependent helicases","protein_coding"
"Potri.012G067000","No alias","Populus trichocarpa","SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein","protein_coding"
"Potri.012G084600","No alias","Populus trichocarpa","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Potri.012G097300","No alias","Populus trichocarpa","U5 small nuclear ribonucleoprotein helicase, putative","protein_coding"
"Potri.012G131000","No alias","Populus trichocarpa","DEAD box RNA helicase (PRH75)","protein_coding"
"Potri.013G048532","No alias","Populus trichocarpa","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Potri.013G068400","No alias","Populus trichocarpa","DNA binding;ATP binding;nucleic acid binding;binding;helicases;ATP binding;DNA binding;helicases","protein_coding"
"Potri.013G109600","No alias","Populus trichocarpa","DEAD/DEAH box RNA helicase family protein","protein_coding"
"Potri.013G158000","No alias","Populus trichocarpa","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Potri.013G161200","No alias","Populus trichocarpa","RECQ helicase L2","protein_coding"
"Potri.014G003900","No alias","Populus trichocarpa","SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related","protein_coding"
"Potri.014G005701","No alias","Populus trichocarpa","SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related","protein_coding"
"Potri.014G050200","No alias","Populus trichocarpa","chromatin remodeling 31","protein_coding"
"Potri.014G056700","No alias","Populus trichocarpa","SNF2 domain-containing protein / helicase domain-containing protein","protein_coding"
"Potri.014G081100","No alias","Populus trichocarpa","RNAhelicase-like 8","protein_coding"
"Potri.014G086500","No alias","Populus trichocarpa","transcription regulatory protein SNF2, putative","protein_coding"
"Potri.014G097700","No alias","Populus trichocarpa","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Potri.014G117900","No alias","Populus trichocarpa","RNA helicase family protein","protein_coding"
"Potri.014G140100","No alias","Populus trichocarpa","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Potri.014G145000","No alias","Populus trichocarpa","DEAD/DEAH box helicase, putative","protein_coding"
"Potri.014G154600","No alias","Populus trichocarpa","Helicase protein with RING/U-box domain","protein_coding"
"Potri.015G008700","No alias","Populus trichocarpa","RNA helicase family protein","protein_coding"
"Potri.015G024400","No alias","Populus trichocarpa","ATP-dependent RNA helicase, putative","protein_coding"
"Potri.015G037200","No alias","Populus trichocarpa","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Potri.015G042500","No alias","Populus trichocarpa","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Potri.015G056501","No alias","Populus trichocarpa","U5 small nuclear ribonucleoprotein helicase","protein_coding"
"Potri.015G083000","No alias","Populus trichocarpa","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Potri.015G095500","No alias","Populus trichocarpa","U5 small nuclear ribonucleoprotein helicase, putative","protein_coding"
"Potri.015G133400","No alias","Populus trichocarpa","DEAD box RNA helicase (PRH75)","protein_coding"
"Potri.016G013900","No alias","Populus trichocarpa","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Potri.016G023100","No alias","Populus trichocarpa","putative mitochondrial RNA helicase 2","protein_coding"
"Potri.016G033500","No alias","Populus trichocarpa","DNA/RNA helicase protein","protein_coding"
"Potri.016G033700","No alias","Populus trichocarpa","DNA/RNA helicase protein","protein_coding"
"Potri.016G033800","No alias","Populus trichocarpa","DNA/RNA helicase protein","protein_coding"
"Potri.016G034000","No alias","Populus trichocarpa","DNA/RNA helicase protein","protein_coding"
"Potri.016G043500","No alias","Populus trichocarpa","INO80 ortholog","protein_coding"
"Potri.016G061900","No alias","Populus trichocarpa","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Potri.016G068900","No alias","Populus trichocarpa","RNA helicase family protein","protein_coding"
"Potri.017G012400","No alias","Populus trichocarpa","switch 2","protein_coding"
"Potri.017G031800","No alias","Populus trichocarpa","zinc finger (CCCH type) helicase family protein","protein_coding"
"Potri.017G050100","No alias","Populus trichocarpa","helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related","protein_coding"
"Potri.017G071400","No alias","Populus trichocarpa","DEAD box RNA helicase family protein","protein_coding"
"Potri.017G081900","No alias","Populus trichocarpa","ATP-dependent RNA helicase, mitochondrial, putative","protein_coding"
"Potri.018G021100","No alias","Populus trichocarpa","chromatin remodeling factor CHD3 (PICKLE)","protein_coding"
"Potri.018G028600","No alias","Populus trichocarpa","DEAD/DEAH box RNA helicase family protein","protein_coding"
"Potri.018G036600","No alias","Populus trichocarpa","helicases;ATP-dependent helicases;nucleic acid binding;ATP binding;DNA-directed DNA polymerases;DNA binding","protein_coding"
"Potri.018G047500","No alias","Populus trichocarpa","dicer-like 3","protein_coding"
"Potri.018G061300","No alias","Populus trichocarpa","eukaryotic translation initiation factor 4A1","protein_coding"
"Potri.018G146001","No alias","Populus trichocarpa","RNA helicase, ATP-dependent, SK12/DOB1 protein","protein_coding"
"Potri.019G021500","No alias","Populus trichocarpa","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Potri.019G059100","No alias","Populus trichocarpa","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Potri.019G060000","No alias","Populus trichocarpa","zinc ion binding;DNA binding;helicases;ATP binding;nucleic acid binding","protein_coding"
"Potri.019G060900","No alias","Populus trichocarpa","zinc ion binding;DNA binding;helicases;ATP binding;nucleic acid binding","protein_coding"
"Potri.019G064500","No alias","Populus trichocarpa","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Potri.019G064900","No alias","Populus trichocarpa","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Potri.019G065300","No alias","Populus trichocarpa","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Potri.019G129900","No alias","Populus trichocarpa","chromatin remodeling 1","protein_coding"
"Potri.019G130900","No alias","Populus trichocarpa","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Potri.T020300","No alias","Populus trichocarpa","eukaryotic translation initiation factor 4A1","protein_coding"
"Potri.T042000","No alias","Populus trichocarpa","zinc ion binding;DNA binding;helicases;ATP binding;nucleic acid binding","protein_coding"
"Potri.T042300","No alias","Populus trichocarpa","zinc ion binding;DNA binding;helicases;ATP binding;nucleic acid binding","protein_coding"
"Potri.T066700","No alias","Populus trichocarpa","DEA(D/H)-box RNA helicase family protein","protein_coding"
"Potri.T164600","No alias","Populus trichocarpa","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding"
"Pp1s116_83V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s119_89V6","No alias","Physcomitrella patens","DBP2; DEAD box RNA helicase [Candida albicans SC5314]","protein_coding"
"Pp1s119_92V6","No alias","Physcomitrella patens","DBP2; DEAD box RNA helicase [Candida albicans SC5314]","protein_coding"
"Pp1s11_19V6","No alias","Physcomitrella patens","deah (asp-glu-ala-asp his) box polypeptide 57","protein_coding"
"Pp1s123_125V6","No alias","Physcomitrella patens","snf2 super family","protein_coding"
"Pp1s123_136V6","No alias","Physcomitrella patens","hla-b associated transcript 1","protein_coding"
"Pp1s124_4V6","No alias","Physcomitrella patens","atp-dependent rna","protein_coding"
"Pp1s128_34V6","No alias","Physcomitrella patens","atp-dependent dna helicase","protein_coding"
"Pp1s12_191V6","No alias","Physcomitrella patens","dead deah box helicase domain protein","protein_coding"
"Pp1s132_19V6","No alias","Physcomitrella patens","chromatin remodeling complex subunit","protein_coding"
"Pp1s135_35V6","No alias","Physcomitrella patens","atp-dependent rna helicase dbp5","protein_coding"
"Pp1s136_29V6","No alias","Physcomitrella patens","MDC16.5; eukaryotic translation initiation factor 4A-1 / eIF-4A-1 [KO:K03257] [Arabidopsis thaliana]","protein_coding"
"Pp1s136_72V6","No alias","Physcomitrella patens","swi snf matrix actin dependent regulator of subfamily member 1","protein_coding"
"Pp1s138_142V6","No alias","Physcomitrella patens","atp-dependent rna helicase db10","protein_coding"
"Pp1s138_171V6","No alias","Physcomitrella patens","atp-dependent rna and dna","protein_coding"
"Pp1s13_454V6","No alias","Physcomitrella patens","atp-dependent rna helicase dbp4","protein_coding"
"Pp1s149_37V6","No alias","Physcomitrella patens","dicer-like 4","protein_coding"
"Pp1s14_367V6","No alias","Physcomitrella patens","dna repair helicase","protein_coding"
"Pp1s152_88V6","No alias","Physcomitrella patens","dna helicase","protein_coding"
"Pp1s153_114V6","No alias","Physcomitrella patens","dead deah box helicase domain protein","protein_coding"
"Pp1s158_37V6","No alias","Physcomitrella patens","snf2 super family","protein_coding"
"Pp1s15_94V6","No alias","Physcomitrella patens","chromatin remodeling complex subunit","protein_coding"
"Pp1s163_136V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s163_96V6","No alias","Physcomitrella patens","dead box atp-dependent rna","protein_coding"
"Pp1s166_101V6","No alias","Physcomitrella patens","chromodomain helicase dna binding protein 6","protein_coding"
"Pp1s168_33V6","No alias","Physcomitrella patens","chromatin remodeling complex subunit","protein_coding"
"Pp1s173_34V6","No alias","Physcomitrella patens","dead box rna","protein_coding"
"Pp1s177_129V6","No alias","Physcomitrella patens","dead (asp-glu-ala-asp) box polypeptide 51","protein_coding"
"Pp1s189_12V6","No alias","Physcomitrella patens","d6 d11-like helicase","protein_coding"
"Pp1s18_265V6","No alias","Physcomitrella patens","pre-mrna-splicing factor atp-dependent rna helicase","protein_coding"
"Pp1s18_273V6","No alias","Physcomitrella patens","pre-mrna-splicing factor atp-dependent rna helicase","protein_coding"
"Pp1s197_19V6","No alias","Physcomitrella patens","chromatin remodelling complex atpase chain isw-","protein_coding"
"Pp1s197_70V6","No alias","Physcomitrella patens","dead (asp-glu-ala-asp) box polypeptide 49","protein_coding"
"Pp1s212_41V6","No alias","Physcomitrella patens","dna repair and recombination protein rad54b (rad54 homolog b)","protein_coding"
"Pp1s212_54V6","No alias","Physcomitrella patens","deah (asp-glu-ala-his) box polypeptide 30","protein_coding"
"Pp1s215_4V6","No alias","Physcomitrella patens","dead box atp-dependent rna","protein_coding"
"Pp1s222_3V6","No alias","Physcomitrella patens","dna helicase","protein_coding"
"Pp1s223_99V6","No alias","Physcomitrella patens","chromodomain helicase dna binding protein 5","protein_coding"
"Pp1s22_130V6","No alias","Physcomitrella patens","d6 d11-like helicase","protein_coding"
"Pp1s22_343V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s232_56V6","No alias","Physcomitrella patens","rothmund-thomson syndrome dna helicase recq4","protein_coding"
"Pp1s235_69V6","No alias","Physcomitrella patens","dead box atp-dependent rna","protein_coding"
"Pp1s235_76V6","No alias","Physcomitrella patens","chromatin remodeling complex subunit","protein_coding"
"Pp1s236_78V6","No alias","Physcomitrella patens","dna repair and recombination protein","protein_coding"
"Pp1s23_24V6","No alias","Physcomitrella patens","dead deah box","protein_coding"
"Pp1s240_21V6","No alias","Physcomitrella patens","atp-dependent rna dead deah box family","protein_coding"
"Pp1s243_58V6","No alias","Physcomitrella patens","dna helicase","protein_coding"
"Pp1s243_71V6","No alias","Physcomitrella patens","F14N22.21; DEAD box RNA helicase, putative [Arabidopsis thaliana]","protein_coding"
"Pp1s245_50V6","No alias","Physcomitrella patens","chromodomain helicase dna binding protein 3","protein_coding"
"Pp1s256_75V6","No alias","Physcomitrella patens","snf2 super family","protein_coding"
"Pp1s257_67V6","No alias","Physcomitrella patens","dead (asp-glu-ala-asp) box polypeptide 42","protein_coding"
"Pp1s25_252V6","No alias","Physcomitrella patens","snf2 super family","protein_coding"
"Pp1s268_11V6","No alias","Physcomitrella patens","deah (asp-glu-ala-his) box polypeptide 35","protein_coding"
"Pp1s274_47V6","No alias","Physcomitrella patens","rna helicase","protein_coding"
"Pp1s275_62V6","No alias","Physcomitrella patens","dead box atp-dependent rna","protein_coding"
"Pp1s279_74V6","No alias","Physcomitrella patens","snf2 super family","protein_coding"
"Pp1s27_189V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s281_62V6","No alias","Physcomitrella patens","transcription-repair coupling factor","protein_coding"
"Pp1s281_93V6","No alias","Physcomitrella patens","d6 d11-like helicase","protein_coding"
"Pp1s28_129V6","No alias","Physcomitrella patens","chromatin remodeling complex subunit","protein_coding"
"Pp1s28_172V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s28_25V6","No alias","Physcomitrella patens","dead (asp-glu-ala-asp) box polypeptide 47","protein_coding"
"Pp1s290_9V6","No alias","Physcomitrella patens","atp-dependent dna helicase","protein_coding"
"Pp1s291_20V6","No alias","Physcomitrella patens","chromodomain-helicase-dna-binding protein","protein_coding"
"Pp1s293_34V6","No alias","Physcomitrella patens","chromodomain helicase dna binding protein 1-like","protein_coding"
"Pp1s29_176V6","No alias","Physcomitrella patens","d6 d11-like helicase","protein_coding"
"Pp1s29_19V6","No alias","Physcomitrella patens","FCAALL.424; DEAD/DEAH box helicase, putative (RH28) [Arabidopsis thaliana]","protein_coding"
"Pp1s304_33V6","No alias","Physcomitrella patens","atp-dependent rna","protein_coding"
"Pp1s304_7V6","No alias","Physcomitrella patens","chromatin remodeling complex subunit","protein_coding"
"Pp1s307_54V6","No alias","Physcomitrella patens","rna helicase","protein_coding"
"Pp1s30_297V6","No alias","Physcomitrella patens","dicer-like protein","protein_coding"
"Pp1s30_42V6","No alias","Physcomitrella patens","dead deah box helicase domain protein","protein_coding"
"Pp1s311_22V6","No alias","Physcomitrella patens","hla-b associated transcript 1","protein_coding"
"Pp1s312_57V6","No alias","Physcomitrella patens","deah-box rna helicase","protein_coding"
"Pp1s317_10V6","No alias","Physcomitrella patens","chromodomain-helicase-dna-binding protein","protein_coding"
"Pp1s31_150V6","No alias","Physcomitrella patens","Eukaryotic initiation factor 4A-9 (ATP-dependent RNA helicase eIF4A-9) (eIF-4A-9) [Nicotiana tabacum]","protein_coding"
"Pp1s32_335V6","No alias","Physcomitrella patens","dead (asp-glu-ala-asp) box polypeptide 52","protein_coding"
"Pp1s331_36V6","No alias","Physcomitrella patens","deah (asp-glu-ala-his) box polypeptide 38","protein_coding"
"Pp1s338_32V6","No alias","Physcomitrella patens","chromodomain helicase dna binding protein 3","protein_coding"
"Pp1s33_329V6","No alias","Physcomitrella patens","chromatin remodeling complex subunit","protein_coding"
"Pp1s341_67V6","No alias","Physcomitrella patens","dna repair and recombination protein","protein_coding"
"Pp1s34_212V6","No alias","Physcomitrella patens","chromatin remodeling complex subunit","protein_coding"
"Pp1s34_370V6","No alias","Physcomitrella patens","snf2 domain-containing expressed","protein_coding"
"Pp1s353_57V6","No alias","Physcomitrella patens","dead box atp-dependent rna","protein_coding"
"Pp1s357_45V6","No alias","Physcomitrella patens","deah (asp-glu-ala-asp his) box polypeptide 57","protein_coding"
"Pp1s358_35V6","No alias","Physcomitrella patens","dead (asp-glu-ala-asp) box polypeptide 42","protein_coding"
"Pp1s35_3V6","No alias","Physcomitrella patens","atp-dependent rna helicase db10","protein_coding"
"Pp1s360_39V6","No alias","Physcomitrella patens","syd atpase chromatin binding","protein_coding"
"Pp1s36_206V6","No alias","Physcomitrella patens","atp-dependent rna","protein_coding"
"Pp1s383_1V6","No alias","Physcomitrella patens","Eukaryotic initiation factor 4A-9 (ATP-dependent RNA helicase eIF4A-9) (eIF-4A-9) [Nicotiana tabacum]","protein_coding"
"Pp1s38_83V6","No alias","Physcomitrella patens","atp-dependent rna","protein_coding"
"Pp1s39_63V6","No alias","Physcomitrella patens","dead (asp-glu-ala-asp) box polypeptide 55","protein_coding"
"Pp1s3_639V6","No alias","Physcomitrella patens","chromatin remodeling complex subunit","protein_coding"
"Pp1s409_13V6","No alias","Physcomitrella patens","dead box atp-dependent rna","protein_coding"
"Pp1s40_169V6","No alias","Physcomitrella patens","rna helicase","protein_coding"
"Pp1s41_174V6","No alias","Physcomitrella patens","dna repair helicase","protein_coding"
"Pp1s41_312V6","No alias","Physcomitrella patens","hfm1 protein","protein_coding"
"Pp1s427_10V6","No alias","Physcomitrella patens","atp-dependent rna","protein_coding"
"Pp1s42_89V6","No alias","Physcomitrella patens","atp-dependent rna helicase db10","protein_coding"
"Pp1s43_55V6","No alias","Physcomitrella patens","deah (asp-glu-ala-his) box polypeptide 16","protein_coding"
"Pp1s440_11V6","No alias","Physcomitrella patens","polymerase (dna directed) theta","protein_coding"
"Pp1s452_20V6","No alias","Physcomitrella patens","helicase swr1","protein_coding"
"Pp1s45_2V6","No alias","Physcomitrella patens","chromatin remodeling complex subunit","protein_coding"
"Pp1s47_44V6","No alias","Physcomitrella patens","chromatin remodeling complex subunit","protein_coding"
"Pp1s48_51V6","No alias","Physcomitrella patens","F14N22.21; DEAD box RNA helicase, putative [Arabidopsis thaliana]","protein_coding"
"Pp1s492_4V6","No alias","Physcomitrella patens","atp-dependent rna helicase dbp5","protein_coding"
"Pp1s519_18V6","No alias","Physcomitrella patens","dead box atp-dependent rna","protein_coding"
"Pp1s527_3V6","No alias","Physcomitrella patens","DBP2; DEAD box RNA helicase [Candida albicans SC5314]","protein_coding"
"Pp1s52_211V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s54_314V6","No alias","Physcomitrella patens","snf2-family atp dependent chromatin remodeling factor snf21","protein_coding"
"Pp1s54_78V6","No alias","Physcomitrella patens","dead (asp-glu-ala-asp) box polypeptide 56","protein_coding"
"Pp1s54_79V6","No alias","Physcomitrella patens","nucleolar rna helicase 2","protein_coding"
"Pp1s55_124V6","No alias","Physcomitrella patens","chromatin remodeling complex subunit","protein_coding"
"Pp1s55_80V6","No alias","Physcomitrella patens","d6 d11-like helicase","protein_coding"
"Pp1s58_31V6","No alias","Physcomitrella patens","superkiller viralicidic activity 2-like 2","protein_coding"
"Pp1s59_1V6","No alias","Physcomitrella patens","transcription-repair coupling factor","protein_coding"
"Pp1s59_317V6","No alias","Physcomitrella patens","rna helicase","protein_coding"
"Pp1s59_55V6","No alias","Physcomitrella patens","dicer-like protein","protein_coding"
"Pp1s59_78V6","No alias","Physcomitrella patens","dna polymerase theta","protein_coding"
"Pp1s59_81V6","No alias","Physcomitrella patens","rna helicase","protein_coding"
"Pp1s5_92V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s61_315V6","No alias","Physcomitrella patens","yth domain containing 2","protein_coding"
"Pp1s62_132V6","No alias","Physcomitrella patens","dead (asp-glu-ala-asp) box polypeptide 59","protein_coding"
"Pp1s65_183V6","No alias","Physcomitrella patens","chromatin remodeling complex subunit","protein_coding"
"Pp1s65_202V6","No alias","Physcomitrella patens","atp-dependent rna","protein_coding"
"Pp1s66_144V6","No alias","Physcomitrella patens","dna repair protein rhp26","protein_coding"
"Pp1s67_231V6","No alias","Physcomitrella patens","rna helicase","protein_coding"
"Pp1s68_101V6","No alias","Physcomitrella patens","dead box atp-dependent rna","protein_coding"
"Pp1s69_14V6","No alias","Physcomitrella patens","superkiller viralicidic activity 2-like 2","protein_coding"
"Pp1s728_1V6","No alias","Physcomitrella patens","ATP-dependent RNA helicase DBP2 [no tax name]","protein_coding"
"Pp1s73_179V6","No alias","Physcomitrella patens","helicase-like transcription factor","protein_coding"
"Pp1s74_188V6","No alias","Physcomitrella patens","chromatin remodeling complex subunit","protein_coding"
"Pp1s76_96V6","No alias","Physcomitrella patens","pre-mrna-splicing atp-dependent rna helicase","protein_coding"
"Pp1s77_16V6","No alias","Physcomitrella patens","No description available","protein_coding"
"Pp1s7_128V6","No alias","Physcomitrella patens","chromatin remodeling complex subunit","protein_coding"
"Pp1s7_15V6","No alias","Physcomitrella patens","dead deah box helicase family expressed","protein_coding"
"Pp1s7_56V6","No alias","Physcomitrella patens","dead box atp-dependent rna","protein_coding"
"Pp1s80_128V6","No alias","Physcomitrella patens","atp-dependent rna helicase dhh1","protein_coding"
"Pp1s82_160V6","No alias","Physcomitrella patens","dicer-like protein","protein_coding"
"Pp1s84_129V6","No alias","Physcomitrella patens","novel rna helicase familyprotein","protein_coding"
"Pp1s84_259V6","No alias","Physcomitrella patens","chromatin remodeling complex subunit","protein_coding"
"Pp1s86_142V6","No alias","Physcomitrella patens","snf2 super family","protein_coding"
"Pp1s87_171V6","No alias","Physcomitrella patens","atp-dependent rna helicase dhh1","protein_coding"
"Pp1s89_224V6","No alias","Physcomitrella patens","deah (asp-glu-ala-his) box polypeptide 8","protein_coding"
"Pp1s90_165V6","No alias","Physcomitrella patens","d6 d11-like helicase","protein_coding"
"Pp1s93_123V6","No alias","Physcomitrella patens","chromodomain-helicase-dna-binding protein","protein_coding"
"Pp1s93_66V6","No alias","Physcomitrella patens","dna helicase","protein_coding"
"Pp1s98_4V6","No alias","Physcomitrella patens","dead h (asp-glu-ala-asp his) box polypeptide 31","protein_coding"
"Pp1s9_477V6","No alias","Physcomitrella patens","fanconi complementation group m","protein_coding"
"PSME_00000065-RA","No alias","Pseudotsuga menziesii","(at5g66750 : 813.0) Protein is similar to SWI2/SNF2 chromatin remodeling proteins. DDM1 is appears to act as a chromatin-remodeling ATPase involved in cytosine methylation in CG and non-CG contexts. Involved in gene silencing and maintenance of DNA methylation and histone methylation. Hypomethylation of many genomic regions occurs in ddm1 mutants, and can cause several phenotypic abnormalities, but some loci, such as BONSAI (At1g73177) can be hypermethylated in ddm1 mutants after several generations, leading to different phenotypes. DDM1 might be involved in establishing a heterochromain boundary. A line expressing an RNAi targeted against DDM1  shows some resistance to agrobacterium-mediated root transformation.; chromatin remodeling 1 (CHR1); FUNCTIONS IN: helicase activity, ATPase activity; INVOLVED IN: methylation-dependent chromatin silencing, DNA mediated transformation, transposition, RNA-mediated; LOCATED IN: nucleosome; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor17 (TAIR:AT5G18620.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 432.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1626.0) &  (original description: no original description)","protein_coding"
"PSME_00000156-RA","No alias","Pseudotsuga menziesii","(at3g12810 : 1465.0) Encodes a protein similar to ATP-dependent, chromatin-remodeling proteins of the ISWI and SWI2/SNF2 family. Genetic analyses suggest that this gene is involved in multiple flowering pathways. Mutations in PIE1 results in suppression of FLC-mediated delay of flowering and causes early flowering in noninductive photoperiods independently of FLC. PIE1 is required for expression of FLC in the shoot apex but not in the root.Along with ARP6 forms a complex to deposit modified histone H2A.Z at several loci within the genome. This modification alters the expression of the target genes (i.e. FLC, MAF4, MAF6).; PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 (PIE1); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; INVOLVED IN: in 6 processes; LOCATED IN: SWI/SNF complex, cell wall, chromatin remodeling complex; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: HSA (InterPro:IPR006562), HAS subgroup (InterPro:IPR013999), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), SNF2-related (InterPro:IPR000330), MYB-like (InterPro:IPR017877), SANT, DNA-binding (InterPro:IPR001005), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: INO80 ortholog (TAIR:AT3G57300.1); Has 42311 Blast hits to 26312 proteins in 2357 species: Archae - 246; Bacteria - 10217; Metazoa - 11172; Fungi - 7336; Plants - 2916; Viruses - 500; Other Eukaryotes - 9924 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 275.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 2930.0) &  (original description: no original description)","protein_coding"
"PSME_00000320-RA","No alias","Pseudotsuga menziesii","(at4g32700 : 939.0) Encodes a homolog of Drosophila MUS308 and mammalian DNA polymerase, which prevent spontaneous or DNA damage-induced production of DNA double strand breaks. Two conserved functional domains: an N-terminal superfamily II DNA/RNA helicase domain and a C-terminal prokaryotic-type DNA polymerase I domain. Required for regulated cell division and differentiation in meristems. Mutant plants show morphological defects, such as short roots, serrated leaves, and fasciation, as well as defective patterns of cell division and differentiation in the meristem. Mutant plants had 2.5 to 4.5-fold higher expression of ATGR1, ATBRCA1 and RAD51 genes. TEB is required for normal  progression of DNA replication and for correct expression of genes during development.; helicases;ATP-dependent helicases;nucleic acid binding;ATP binding;DNA-directed DNA polymerases;DNA binding; FUNCTIONS IN: in 6 functions; INVOLVED IN: regulation of gene expression, DNA replication, DNA recombination, photomorphogenesis; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA-directed DNA polymerase, family A, palm domain (InterPro:IPR001098), DNA/RNA helicase, C-terminal (InterPro:IPR001650), DNA polymerase A domain (InterPro:IPR002298), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase (TAIR:AT2G42270.1); Has 17628 Blast hits to 16579 proteins in 2941 species: Archae - 600; Bacteria - 7507; Metazoa - 1254; Fungi - 1190; Plants - 590; Viruses - 412; Other Eukaryotes - 6075 (source: NCBI BLink). & (reliability: 1878.0) &  (original description: no original description)","protein_coding"
"PSME_00000345-RA","No alias","Pseudotsuga menziesii","(at5g60990 : 556.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase 36 (TAIR:AT1G16280.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p46942|db10_nicsy : 196.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1112.0) &  (original description: no original description)","protein_coding"
"PSME_00000403-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00000429-RA","No alias","Pseudotsuga menziesii","(at2g28290 : 480.0) Encodes a SWI2/SNF2-like protein in the SNF2 subclass. Homozygous plants with null mutations exhibit premature termination of the meristem and carpelloid structures from the inflorescence meristem. Co-activator of floral  homeotic gene expression. Acts with LFY to regulate shoot apical meristem identity. Required for meristem maintenance. Regulates  flowering under a non-inductive photoperiod. It promotes the expression of CUC2 during cotyledon boundary formation.  Affects reproductive shoot apical meristem function by regulating the expression of WUS. In CHiP experiments SYD binds to WUS promoter. Present as two forms in the nucleus, full-length and truncated, with the latter apparently lacking the C-terminal domain. The ratio of the two forms  differs in juvenile and in adult tissues. The C-terminal domain is not required for activity.; SPLAYED (SYD); CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT3G06010.1); Has 38598 Blast hits to 29293 proteins in 2471 species: Archae - 323; Bacteria - 8462; Metazoa - 11641; Fungi - 6683; Plants - 2383; Viruses - 257; Other Eukaryotes - 8849 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 194.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 960.0) &  (original description: no original description)","protein_coding"
"PSME_00000892-RA","No alias","Pseudotsuga menziesii","(p35683|if4a_orysa : 720.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Oryza sativa (Rice) & (at1g54270 : 711.0) member of eIF4A - eukaryotic initiation factor 4A; eif4a-2 (EIF4A-2); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 4A1 (TAIR:AT3G13920.4). & (reliability: 1422.0) &  (original description: no original description)","protein_coding"
"PSME_00001593-RA","No alias","Pseudotsuga menziesii","(at2g13370 : 1311.0) chromatin remodeling 5 (CHR5); FUNCTIONS IN: chromatin binding, helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: chromatin assembly or disassembly; LOCATED IN: chromatin, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), Homeodomain-like (InterPro:IPR009057), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor CHD3 (PICKLE) (TAIR:AT2G25170.1); Has 38529 Blast hits to 28045 proteins in 2467 species: Archae - 189; Bacteria - 9973; Metazoa - 8887; Fungi - 6205; Plants - 2508; Viruses - 447; Other Eukaryotes - 10320 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 454.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 2622.0) &  (original description: no original description)","protein_coding"
"PSME_00001767-RA","No alias","Pseudotsuga menziesii","(at5g66750 : 797.0) Protein is similar to SWI2/SNF2 chromatin remodeling proteins. DDM1 is appears to act as a chromatin-remodeling ATPase involved in cytosine methylation in CG and non-CG contexts. Involved in gene silencing and maintenance of DNA methylation and histone methylation. Hypomethylation of many genomic regions occurs in ddm1 mutants, and can cause several phenotypic abnormalities, but some loci, such as BONSAI (At1g73177) can be hypermethylated in ddm1 mutants after several generations, leading to different phenotypes. DDM1 might be involved in establishing a heterochromain boundary. A line expressing an RNAi targeted against DDM1  shows some resistance to agrobacterium-mediated root transformation.; chromatin remodeling 1 (CHR1); FUNCTIONS IN: helicase activity, ATPase activity; INVOLVED IN: methylation-dependent chromatin silencing, DNA mediated transformation, transposition, RNA-mediated; LOCATED IN: nucleosome; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor17 (TAIR:AT5G18620.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 436.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1594.0) &  (original description: no original description)","protein_coding"
"PSME_00001935-RA","No alias","Pseudotsuga menziesii","(at1g05120 : 253.0) Helicase protein with RING/U-box domain; FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G02670.1); Has 29218 Blast hits to 14448 proteins in 1607 species: Archae - 124; Bacteria - 8622; Metazoa - 6656; Fungi - 6694; Plants - 2674; Viruses - 189; Other Eukaryotes - 4259 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 90.1) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 506.0) &  (original description: no original description)","protein_coding"
"PSME_00002380-RA","No alias","Pseudotsuga menziesii","(at2g18760 : 1200.0) chromatin remodeling 8 (CHR8); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; INVOLVED IN: DNA repair, response to gamma radiation; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling 24 (TAIR:AT5G63950.1); Has 17230 Blast hits to 14463 proteins in 1653 species: Archae - 99; Bacteria - 4180; Metazoa - 3846; Fungi - 4219; Plants - 1677; Viruses - 118; Other Eukaryotes - 3091 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 275.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 2400.0) &  (original description: no original description)","protein_coding"
"PSME_00002746-RA","No alias","Pseudotsuga menziesii","(at3g53110 : 234.0) Encodes a putative DEAD-Box RNA Helicase and has RNA-dependent ATPase activity. Mutant is Sensitive to chilling stress and heat stress. Germination of the mutant is inhibited by ABA. LOS4 may be involved in temperature sensing. Is enriched in the nuclear envelope and also located in the cytoplasm. LOS4 is involved in export of poly A RNA.; LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 4 (LOS4); FUNCTIONS IN: RNA helicase activity, RNA-dependent ATPase activity, ATP-dependent helicase activity; INVOLVED IN: poly(A)+ mRNA export from nucleus, response to cold, response to heat, response to abscisic acid stimulus; LOCATED IN: nuclear envelope, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eukaryotic initiation factor 4A-III (TAIR:AT3G19760.1); Has 40925 Blast hits to 40635 proteins in 3033 species: Archae - 702; Bacteria - 21081; Metazoa - 5720; Fungi - 4311; Plants - 2419; Viruses - 28; Other Eukaryotes - 6664 (source: NCBI BLink). & (q40468|if415_tobac : 144.0) Eukaryotic initiation factor 4A-15 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-15) (eIF-4A-15) - Nicotiana tabacum (Common tobacco) & (reliability: 468.0) &  (original description: no original description)","protein_coding"
"PSME_00004225-RA","No alias","Pseudotsuga menziesii","(at3g62310 : 1190.0) RNA helicase family protein; FUNCTIONS IN: RNA helicase activity, helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase family protein (TAIR:AT2G47250.1); Has 10517 Blast hits to 9531 proteins in 1639 species: Archae - 4; Bacteria - 3473; Metazoa - 2472; Fungi - 1291; Plants - 883; Viruses - 640; Other Eukaryotes - 1754 (source: NCBI BLink). & (reliability: 2380.0) &  (original description: no original description)","protein_coding"
"PSME_00004575-RA","No alias","Pseudotsuga menziesii","(at5g22750 : 407.0) DNA repair gene. gamma-radiation hypersensitive (RAD5) involved in stable transformation and T-DNA transfer; RAD5; FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA mediated transformation; EXPRESSED IN: embryo, sperm cell, seed; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), HIP116, Rad5p N-terminal (InterPro:IPR014905), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Helicase protein with RING/U-box domain (TAIR:AT5G43530.1); Has 27107 Blast hits to 18179 proteins in 1771 species: Archae - 108; Bacteria - 7266; Metazoa - 8140; Fungi - 5089; Plants - 2446; Viruses - 173; Other Eukaryotes - 3885 (source: NCBI BLink). & (reliability: 814.0) &  (original description: no original description)","protein_coding"
"PSME_00005080-RA","No alias","Pseudotsuga menziesii","(at5g13010 : 1519.0) embryo defective 3011 (EMB3011); FUNCTIONS IN: RNA helicase activity, helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, putative (TAIR:AT3G26560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 3038.0) &  (original description: no original description)","protein_coding"
"PSME_00005283-RA","No alias","Pseudotsuga menziesii","(at3g54280 : 1379.0) ROOT GROWTH DEFECTIVE 3 (RGD3); FUNCTIONS IN: helicase activity, binding, DNA binding, nucleic acid binding, ATP binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), DEAD-like helicase, N-terminal (InterPro:IPR014001), Armadillo-type fold (InterPro:IPR016024), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT3G06010.1). & (q7g8y3|isw2_orysa : 213.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 2758.0) &  (original description: no original description)","protein_coding"
"PSME_00005765-RA","No alias","Pseudotsuga menziesii","(q7g8y3|isw2_orysa : 1630.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (at3g06400 : 1614.0) Encodes a SWI2/SNF2 chromatin remodeling protein belonging to the ISWI family. Involved in nuclear proliferation during megagametogenesis and cell expansion in the sporophyte. Constitutively expressed. RNAi induced loss of function in megagametogenesis results in female sterility.35S:RNAi plants have reduced stature.; chromatin-remodeling protein 11 (CHR11); FUNCTIONS IN: in 7 functions; INVOLVED IN: cell growth, embryo sac development; LOCATED IN: nucleus, chromatin remodeling complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, nucleosome remodelling ISWI, HAND domain (InterPro:IPR015194), SANT, eukarya (InterPro:IPR017884), SNF2-related (InterPro:IPR000330), SANT, DNA-binding (InterPro:IPR001005), SLIDE (InterPro:IPR015195), Homeodomain-like (InterPro:IPR009057), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor17 (TAIR:AT5G18620.2). & (reliability: 3228.0) &  (original description: no original description)","protein_coding"
"PSME_00006013-RA","No alias","Pseudotsuga menziesii","(at1g27880 : 555.0) DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: DNA recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box RNA helicase family protein  (TAIR:AT4G35740.1); Has 41244 Blast hits to 39032 proteins in 2984 species: Archae - 762; Bacteria - 21282; Metazoa - 5401; Fungi - 4173; Plants - 3671; Viruses - 588; Other Eukaryotes - 5367 (source: NCBI BLink). & (reliability: 1110.0) &  (original description: no original description)","protein_coding"
"PSME_00006076-RA","No alias","Pseudotsuga menziesii","(at1g59760 : 1096.0) RNA helicase, ATP-dependent, SK12/DOB1 protein; FUNCTIONS IN: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DSH, C-terminal (InterPro:IPR012961), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), RNA helicase, ATP-dependent, SK12/DOB1 (InterPro:IPR016438), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase, ATP-dependent, SK12/DOB1 protein (TAIR:AT2G06990.1); Has 9909 Blast hits to 8438 proteins in 1290 species: Archae - 828; Bacteria - 3072; Metazoa - 1170; Fungi - 1231; Plants - 476; Viruses - 32; Other Eukaryotes - 3100 (source: NCBI BLink). & (reliability: 2192.0) &  (original description: no original description)","protein_coding"
"PSME_00006321-RA","No alias","Pseudotsuga menziesii","(at1g77030 : 712.0) hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides;ATP-dependent helicases;nucleic acid binding;ATP binding;RNA binding;helicases; FUNCTIONS IN: in 6 functions; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DBP10CT (InterPro:IPR012541), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 42888 Blast hits to 42073 proteins in 3063 species: Archae - 831; Bacteria - 21864; Metazoa - 5973; Fungi - 4375; Plants - 2654; Viruses - 31; Other Eukaryotes - 7160 (source: NCBI BLink). & (p46942|db10_nicsy : 204.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1424.0) &  (original description: no original description)","protein_coding"
"PSME_00006452-RA","No alias","Pseudotsuga menziesii","(at1g26370 : 840.0) RNA helicase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), ATPase, AAA+ type, core (InterPro:IPR003593), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, putative (TAIR:AT3G26560.1); Has 9899 Blast hits to 9180 proteins in 1561 species: Archae - 2; Bacteria - 3369; Metazoa - 2309; Fungi - 1230; Plants - 848; Viruses - 465; Other Eukaryotes - 1676 (source: NCBI BLink). & (reliability: 1680.0) &  (original description: no original description)","protein_coding"
"PSME_00006567-RA","No alias","Pseudotsuga menziesii","(at5g44800 : 1157.0) chromatin remodeling 4 (CHR4); FUNCTIONS IN: in 6 functions; INVOLVED IN: chromatin assembly or disassembly, regulation of transcription; LOCATED IN: chromatin, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1087 (InterPro:IPR009463), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Homeodomain-related (InterPro:IPR012287), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor CHD3 (PICKLE) (TAIR:AT2G25170.1); Has 35726 Blast hits to 27895 proteins in 2283 species: Archae - 135; Bacteria - 6476; Metazoa - 12546; Fungi - 6155; Plants - 3074; Viruses - 328; Other Eukaryotes - 7012 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 357.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 2314.0) &  (original description: no original description)","protein_coding"
"PSME_00007417-RA","No alias","Pseudotsuga menziesii","(at1g33390 : 609.0) Over-expression of this gene results in stem fasciation.  The predicted amino acid sequence reveals the presence of two   domains (DEXH-box or DEAD-box helicase and DUF1065 domain) and fragments of two more domains (HrpA domain and HA2 domain).; FASCIATED STEM 4 (FAS4); FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, putative (TAIR:AT3G26560.1); Has 16056 Blast hits to 9082 proteins in 1556 species: Archae - 2; Bacteria - 6415; Metazoa - 3625; Fungi - 2171; Plants - 1181; Viruses - 334; Other Eukaryotes - 2328 (source: NCBI BLink). & (reliability: 1218.0) &  (original description: no original description)","protein_coding"
"PSME_00007813-RA","No alias","Pseudotsuga menziesii","(at1g27900 : 599.0) RNA helicase family protein; FUNCTIONS IN: in 7 functions; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), ATPase, AAA+ type, core (InterPro:IPR003593), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, putative (TAIR:AT3G26560.1); Has 10760 Blast hits to 9882 proteins in 1732 species: Archae - 26; Bacteria - 3503; Metazoa - 2392; Fungi - 1270; Plants - 841; Viruses - 1056; Other Eukaryotes - 1672 (source: NCBI BLink). & (reliability: 1198.0) &  (original description: no original description)","protein_coding"
"PSME_00007867-RA","No alias","Pseudotsuga menziesii","(at1g05120 : 250.0) Helicase protein with RING/U-box domain; FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G02670.1); Has 29218 Blast hits to 14448 proteins in 1607 species: Archae - 124; Bacteria - 8622; Metazoa - 6656; Fungi - 6694; Plants - 2674; Viruses - 189; Other Eukaryotes - 4259 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 93.2) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 500.0) &  (original description: no original description)","protein_coding"
"PSME_00008176-RA","No alias","Pseudotsuga menziesii","(at5g05130 : 678.0) DNA/RNA helicase protein; FUNCTIONS IN: in 6 functions; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), HIP116, Rad5p N-terminal (InterPro:IPR014905), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: DNA/RNA helicase protein (TAIR:AT5G22750.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1356.0) &  (original description: no original description)","protein_coding"
"PSME_00008239-RA","No alias","Pseudotsuga menziesii","(at4g01020 : 162.0) helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related; FUNCTIONS IN: in 6 functions; LOCATED IN: intracellular, chloroplast; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, RING-type, conserved site (InterPro:IPR017907), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841), K Homology (InterPro:IPR004087), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, C2H2-type (InterPro:IPR007087), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related (TAIR:AT5G10370.1); Has 13197 Blast hits to 12409 proteins in 1676 species: Archae - 4; Bacteria - 3384; Metazoa - 3503; Fungi - 1989; Plants - 1444; Viruses - 760; Other Eukaryotes - 2113 (source: NCBI BLink). & (reliability: 324.0) &  (original description: no original description)","protein_coding"
"PSME_00008566-RA","No alias","Pseudotsuga menziesii","(at1g03750 : 511.0) switch 2 (SWI2); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: homolog of RAD54 (TAIR:AT3G19210.1); Has 20033 Blast hits to 14398 proteins in 1655 species: Archae - 120; Bacteria - 5954; Metazoa - 4199; Fungi - 4321; Plants - 1927; Viruses - 177; Other Eukaryotes - 3335 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 112.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1022.0) &  (original description: no original description)","protein_coding"
"PSME_00009913-RA","No alias","Pseudotsuga menziesii","(at1g33390 : 317.0) Over-expression of this gene results in stem fasciation.  The predicted amino acid sequence reveals the presence of two   domains (DEXH-box or DEAD-box helicase and DUF1065 domain) and fragments of two more domains (HrpA domain and HA2 domain).; FASCIATED STEM 4 (FAS4); FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, putative (TAIR:AT3G26560.1); Has 16056 Blast hits to 9082 proteins in 1556 species: Archae - 2; Bacteria - 6415; Metazoa - 3625; Fungi - 2171; Plants - 1181; Viruses - 334; Other Eukaryotes - 2328 (source: NCBI BLink). & (reliability: 634.0) &  (original description: no original description)","protein_coding"
"PSME_00010415-RA","No alias","Pseudotsuga menziesii","(at3g46730 : 120.0) NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46530.1); Has 14658 Blast hits to 14197 proteins in 483 species: Archae - 6; Bacteria - 489; Metazoa - 440; Fungi - 102; Plants - 13534; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). & (reliability: 228.0) &  (original description: no original description)","protein_coding"
"PSME_00010460-RA","No alias","Pseudotsuga menziesii","(at3g43920 : 855.0) Encodes a ribonuclease III family protein that is required for endogenous RDR2-dependent siRNA (but not miRNA) formation.; dicer-like 3 (DCL3); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Ribonuclease III (InterPro:IPR000999); BEST Arabidopsis thaliana protein match is: dicer-like 1 (TAIR:AT1G01040.1); Has 13599 Blast hits to 8740 proteins in 2670 species: Archae - 198; Bacteria - 7991; Metazoa - 1636; Fungi - 703; Plants - 621; Viruses - 45; Other Eukaryotes - 2405 (source: NCBI BLink). & (reliability: 1710.0) &  (original description: no original description)","protein_coding"
"PSME_00010735-RA","No alias","Pseudotsuga menziesii","(at1g55150 : 311.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 46818 Blast hits to 45969 proteins in 3127 species: Archae - 940; Bacteria - 23848; Metazoa - 6439; Fungi - 4774; Plants - 2718; Viruses - 21; Other Eukaryotes - 8078 (source: NCBI BLink). & (p46942|db10_nicsy : 266.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 622.0) &  (original description: no original description)","protein_coding"
"PSME_00010814-RA","No alias","Pseudotsuga menziesii","(at1g55150 : 688.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 46818 Blast hits to 45969 proteins in 3127 species: Archae - 940; Bacteria - 23848; Metazoa - 6439; Fungi - 4774; Plants - 2718; Viruses - 21; Other Eukaryotes - 8078 (source: NCBI BLink). & (p46942|db10_nicsy : 429.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1376.0) &  (original description: no original description)","protein_coding"
"PSME_00011616-RA","No alias","Pseudotsuga menziesii","(at2g40700 : 136.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G65900.1); Has 40440 Blast hits to 37904 proteins in 2977 species: Archae - 739; Bacteria - 19708; Metazoa - 6217; Fungi - 4486; Plants - 2481; Viruses - 5; Other Eukaryotes - 6804 (source: NCBI BLink). & (reliability: 272.0) &  (original description: no original description)","protein_coding"
"PSME_00011717-RA","No alias","Pseudotsuga menziesii","(at5g44800 : 341.0) chromatin remodeling 4 (CHR4); FUNCTIONS IN: in 6 functions; INVOLVED IN: chromatin assembly or disassembly, regulation of transcription; LOCATED IN: chromatin, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1087 (InterPro:IPR009463), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Chromo domain (InterPro:IPR000953), SNF2-related (InterPro:IPR000330), DEAD-like helicase, N-terminal (InterPro:IPR014001), Chromo domain-like (InterPro:IPR016197), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Homeodomain-related (InterPro:IPR012287), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor CHD3 (PICKLE) (TAIR:AT2G25170.1); Has 35726 Blast hits to 27895 proteins in 2283 species: Archae - 135; Bacteria - 6476; Metazoa - 12546; Fungi - 6155; Plants - 3074; Viruses - 328; Other Eukaryotes - 7012 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 171.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 682.0) &  (original description: no original description)","protein_coding"
"PSME_00012052-RA","No alias","Pseudotsuga menziesii","(at2g46020 : 1579.0) Encodes a SWI/SNF chromatin remodeling ATPase that upregulates transcription of all three CUC genes and is involved in the formation and/or maintenance of boundary cells during embryogenesis. Also mediates repression of expression of seed storage proteins in vegetative tissues. Interacts strongly with AtSWI3C, also with AtSWI3B, but not with AtSWI3A or AtSWI3D.; BRAHMA (BRM); FUNCTIONS IN: helicase activity, transcription regulator activity, DNA binding, ATP binding; INVOLVED IN: ATP-dependent chromatin remodeling, organ boundary specification between lateral organs and the meristem, regulation of gene expression, epigenetic; LOCATED IN: cytosol, nucleus, chromatin remodeling complex; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Bromodomain (InterPro:IPR001487), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G28290.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 345.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 3158.0) &  (original description: no original description)","protein_coding"
"PSME_00012859-RA","No alias","Pseudotsuga menziesii","(at5g51280 : 951.0) DEAD-box protein abstrakt, putative; FUNCTIONS IN: helicase activity, zinc ion binding, ATP-dependent helicase activity, nucleic acid binding, ATP binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, CCHC-type (InterPro:IPR001878), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT4G33370.1); Has 46358 Blast hits to 45535 proteins in 3129 species: Archae - 906; Bacteria - 23651; Metazoa - 6388; Fungi - 4930; Plants - 2690; Viruses - 10; Other Eukaryotes - 7783 (source: NCBI BLink). & (p46942|db10_nicsy : 274.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1902.0) &  (original description: no original description)","protein_coding"
"PSME_00012902-RA","No alias","Pseudotsuga menziesii","(at3g05740 : 416.0) RECQ helicase l1 (RECQI1); FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: DNA recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DNA helicase (RECQl4A) (TAIR:AT1G10930.1); Has 22913 Blast hits to 22836 proteins in 2673 species: Archae - 358; Bacteria - 13443; Metazoa - 2936; Fungi - 2132; Plants - 1261; Viruses - 9; Other Eukaryotes - 2774 (source: NCBI BLink). & (reliability: 832.0) &  (original description: no original description)","protein_coding"
"PSME_00013127-RA","No alias","Pseudotsuga menziesii","(at5g63630 : 704.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G08610.1); Has 41050 Blast hits to 40248 proteins in 2998 species: Archae - 715; Bacteria - 20319; Metazoa - 6002; Fungi - 4604; Plants - 2553; Viruses - 10; Other Eukaryotes - 6847 (source: NCBI BLink). & (p46942|db10_nicsy : 178.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1408.0) &  (original description: no original description)","protein_coding"
"PSME_00013357-RA","No alias","Pseudotsuga menziesii","(at1g20920 : 1027.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G09620.1); Has 45185 Blast hits to 44279 proteins in 3076 species: Archae - 794; Bacteria - 22443; Metazoa - 6674; Fungi - 4936; Plants - 2699; Viruses - 11; Other Eukaryotes - 7628 (source: NCBI BLink). & (p46942|db10_nicsy : 306.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 2054.0) &  (original description: no original description)","protein_coding"
"PSME_00013579-RA","No alias","Pseudotsuga menziesii","(at5g11170 : 732.0) DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; INVOLVED IN: response to cadmium ion; LOCATED IN: nucleolus; EXPRESSED IN: guard cell, root, cultured cell; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box RNA helicase family protein  (TAIR:AT5G11200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p41378|if4a_wheat : 239.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Triticum aestivum (Wheat) & (reliability: 1464.0) &  (original description: no original description)","protein_coding"
"PSME_00013617-RA","No alias","Pseudotsuga menziesii","(at1g20920 : 1026.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G09620.1); Has 45185 Blast hits to 44279 proteins in 3076 species: Archae - 794; Bacteria - 22443; Metazoa - 6674; Fungi - 4936; Plants - 2699; Viruses - 11; Other Eukaryotes - 7628 (source: NCBI BLink). & (p46942|db10_nicsy : 304.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 2052.0) &  (original description: no original description)","protein_coding"
"PSME_00013759-RA","No alias","Pseudotsuga menziesii","(at3g18600 : 554.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G65900.1); Has 44310 Blast hits to 43105 proteins in 3082 species: Archae - 753; Bacteria - 22440; Metazoa - 6214; Fungi - 4682; Plants - 2500; Viruses - 12; Other Eukaryotes - 7709 (source: NCBI BLink). & (p46942|db10_nicsy : 131.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1108.0) &  (original description: no original description)","protein_coding"
"PSME_00013820-RA","No alias","Pseudotsuga menziesii","(q41382|rh7_spiol : 651.0) DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) & (at5g62190 : 645.0) DEAD/DEAH box RNA helicase PRH75; PRH75; FUNCTIONS IN: DEAD/H-box RNA helicase binding, ATP-dependent helicase activity; INVOLVED IN: RNA metabolic process; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), GUCT (InterPro:IPR012562), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase (RH3) (TAIR:AT5G26742.2); Has 57587 Blast hits to 49572 proteins in 3210 species: Archae - 795; Bacteria - 24538; Metazoa - 10953; Fungi - 6002; Plants - 4052; Viruses - 90; Other Eukaryotes - 11157 (source: NCBI BLink). & (reliability: 1290.0) &  (original description: no original description)","protein_coding"
"PSME_00013853-RA","No alias","Pseudotsuga menziesii","(at3g19210 : 887.0) Encodes RAD54, a member of the SWI2/SNF2 family of DNA-stimulated ATPases.  Functions in DNA repair via homologous recombination.; homolog of RAD54 (RAD54); FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: DNA repair, response to gamma radiation, double-strand break repair via homologous recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: style (sensu Poaceae), hydathode, root, petiole; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: switch 2 (TAIR:AT1G03750.1). & (q7g8y3|isw2_orysa : 186.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1774.0) &  (original description: no original description)","protein_coding"
"PSME_00013965-RA","No alias","Pseudotsuga menziesii","(at3g57300 : 1516.0) Encodes the Arabidopsis INO80 ortholog of the SWI/SNF ATPase family.  Functions as a positive regulator of DNA homologous recombination (HR).  In INO80 mutants, the HR frequency is reduced to 15% of that in the wild-type.  Mutation in INO80 does not affect sensitivity to genotoxic agents and efficiency of T-DNA integration.  INO80 was also shown to regulate a subset of the Arabidopsis transcriptome.; INO80 ortholog (INO80); FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: somatic cell DNA recombination, positive regulation of DNA repair, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA binding domain, INO80 (InterPro:IPR020838), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein (TAIR:AT3G12810.1). & (q7g8y3|isw2_orysa : 249.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 3032.0) &  (original description: no original description)","protein_coding"
"PSME_00014810-RA","No alias","Pseudotsuga menziesii","(q41382|rh7_spiol : 645.0) DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) & (at5g62190 : 640.0) DEAD/DEAH box RNA helicase PRH75; PRH75; FUNCTIONS IN: DEAD/H-box RNA helicase binding, ATP-dependent helicase activity; INVOLVED IN: RNA metabolic process; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), GUCT (InterPro:IPR012562), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase (RH3) (TAIR:AT5G26742.2); Has 57587 Blast hits to 49572 proteins in 3210 species: Archae - 795; Bacteria - 24538; Metazoa - 10953; Fungi - 6002; Plants - 4052; Viruses - 90; Other Eukaryotes - 11157 (source: NCBI BLink). & (reliability: 1280.0) &  (original description: no original description)","protein_coding"
"PSME_00015528-RA","No alias","Pseudotsuga menziesii","(at3g57300 : 1091.0) Encodes the Arabidopsis INO80 ortholog of the SWI/SNF ATPase family.  Functions as a positive regulator of DNA homologous recombination (HR).  In INO80 mutants, the HR frequency is reduced to 15% of that in the wild-type.  Mutation in INO80 does not affect sensitivity to genotoxic agents and efficiency of T-DNA integration.  INO80 was also shown to regulate a subset of the Arabidopsis transcriptome.; INO80 ortholog (INO80); FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: somatic cell DNA recombination, positive regulation of DNA repair, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA binding domain, INO80 (InterPro:IPR020838), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein (TAIR:AT3G12810.1). & (q7g8y3|isw2_orysa : 251.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 2182.0) &  (original description: no original description)","protein_coding"
"PSME_00015686-RA","No alias","Pseudotsuga menziesii","(at3g16840 : 629.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 60083 Blast hits to 51461 proteins in 3186 species: Archae - 589; Bacteria - 20345; Metazoa - 13239; Fungi - 7387; Plants - 3446; Viruses - 273; Other Eukaryotes - 14804 (source: NCBI BLink). & (q41382|rh7_spiol : 150.0) DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) & (reliability: 1258.0) &  (original description: no original description)","protein_coding"
"PSME_00015826-RA","No alias","Pseudotsuga menziesii","(at3g06010 : 472.0) Encodes AtCHR12, a SNF2/Brahma-type chromatin-remodeling protein.  AtCHR12 mediates temporary growth arrest in Arabidopsis upon perceiving environmental stress.; ATCHR12; FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; INVOLVED IN: response to water deprivation, response to salt stress, response to heat; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT5G19310.1); Has 23556 Blast hits to 19403 proteins in 2220 species: Archae - 141; Bacteria - 6122; Metazoa - 5759; Fungi - 4503; Plants - 1859; Viruses - 268; Other Eukaryotes - 4904 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 219.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 944.0) &  (original description: no original description)","protein_coding"
"PSME_00015944-RA","No alias","Pseudotsuga menziesii","(at2g35920 : 702.0) RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G04895.1); Has 15667 Blast hits to 10761 proteins in 1709 species: Archae - 0; Bacteria - 5024; Metazoa - 4470; Fungi - 1848; Plants - 1329; Viruses - 777; Other Eukaryotes - 2219 (source: NCBI BLink). & (reliability: 1404.0) &  (original description: no original description)","protein_coding"
"PSME_00016394-RA","No alias","Pseudotsuga menziesii","(at3g26560 : 1512.0) ATP-dependent RNA helicase, putative; FUNCTIONS IN: in 6 functions; LOCATED IN: cytosol, mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Domain of unknown function DUF1605 (InterPro:IPR011709), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase family protein (TAIR:AT1G32490.2); Has 53052 Blast hits to 35825 proteins in 3176 species: Archae - 195; Bacteria - 13845; Metazoa - 17201; Fungi - 5520; Plants - 3365; Viruses - 1203; Other Eukaryotes - 11723 (source: NCBI BLink). & (reliability: 3024.0) &  (original description: no original description)","protein_coding"
"PSME_00017078-RA","No alias","Pseudotsuga menziesii","(at5g54910 : 653.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G65900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p46942|db10_nicsy : 186.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1306.0) &  (original description: no original description)","protein_coding"
"PSME_00017117-RA","No alias","Pseudotsuga menziesii","(at1g12770 : 542.0) Encodes a DEAD-box RNA helicase that  localizes to mitochondria and is essential for regulating cell-to-cell transport via plasmodesmata.; embryo defective 1586 (EMB1586); FUNCTIONS IN: RNA helicase activity; INVOLVED IN: plasmodesma organization, plasmodesmata-mediated intercellular transport, embryo development ending in seed dormancy; LOCATED IN: mitochondrion; EXPRESSED IN: embryo, root, flower, shoot meristem; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 38833 Blast hits to 38121 proteins in 2993 species: Archae - 753; Bacteria - 18819; Metazoa - 5837; Fungi - 4441; Plants - 2445; Viruses - 12; Other Eukaryotes - 6526 (source: NCBI BLink). & (p41378|if4a_wheat : 157.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Triticum aestivum (Wheat) & (reliability: 1084.0) &  (original description: no original description)","protein_coding"
"PSME_00017433-RA","No alias","Pseudotsuga menziesii","(at5g22750 : 1092.0) DNA repair gene. gamma-radiation hypersensitive (RAD5) involved in stable transformation and T-DNA transfer; RAD5; FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA mediated transformation; EXPRESSED IN: embryo, sperm cell, seed; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), HIP116, Rad5p N-terminal (InterPro:IPR014905), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Helicase protein with RING/U-box domain (TAIR:AT5G43530.1); Has 27107 Blast hits to 18179 proteins in 1771 species: Archae - 108; Bacteria - 7266; Metazoa - 8140; Fungi - 5089; Plants - 2446; Viruses - 173; Other Eukaryotes - 3885 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 97.4) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 2184.0) &  (original description: no original description)","protein_coding"
"PSME_00017596-RA","No alias","Pseudotsuga menziesii","(at1g31970 : 254.0) STRESS RESPONSE SUPPRESSOR 1 (STRS1); FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 53114 Blast hits to 49629 proteins in 3238 species: Archae - 911; Bacteria - 25415; Metazoa - 8113; Fungi - 5284; Plants - 3075; Viruses - 103; Other Eukaryotes - 10213 (source: NCBI BLink). & (p46942|db10_nicsy : 129.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 508.0) &  (original description: no original description)","protein_coding"
"PSME_00017686-RA","No alias","Pseudotsuga menziesii","(p41378|if4a_wheat : 168.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Triticum aestivum (Wheat) & (at3g13920 : 162.0) eukaryotic translation initiation factor 4A-1; eukaryotic translation initiation factor 4A1 (EIF4A1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eif4a-2 (TAIR:AT1G54270.2). & (reliability: 324.0) &  (original description: no original description)","protein_coding"
"PSME_00017714-RA","No alias","Pseudotsuga menziesii","(at1g55150 : 715.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 46818 Blast hits to 45969 proteins in 3127 species: Archae - 940; Bacteria - 23848; Metazoa - 6439; Fungi - 4774; Plants - 2718; Viruses - 21; Other Eukaryotes - 8078 (source: NCBI BLink). & (p46942|db10_nicsy : 415.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1430.0) &  (original description: no original description)","protein_coding"
"PSME_00018109-RA","No alias","Pseudotsuga menziesii","(at5g26742 : 768.0) embryo defective 1138 (emb1138); FUNCTIONS IN: in 6 functions; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), GUCT (InterPro:IPR012562), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, CCHC-type (InterPro:IPR001878), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: putative mitochondrial RNA helicase 2 (TAIR:AT3G22330.1). & (q41382|rh7_spiol : 351.0) DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) & (reliability: 1536.0) &  (original description: no original description)","protein_coding"
"PSME_00018498-RA","No alias","Pseudotsuga menziesii","(at5g63630 : 378.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G08610.1); Has 41050 Blast hits to 40248 proteins in 2998 species: Archae - 715; Bacteria - 20319; Metazoa - 6002; Fungi - 4604; Plants - 2553; Viruses - 10; Other Eukaryotes - 6847 (source: NCBI BLink). & (p41380|if4a3_nicpl : 110.0) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 756.0) &  (original description: no original description)","protein_coding"
"PSME_00018507-RA","No alias","Pseudotsuga menziesii","(at1g61140 : 805.0) embryo sac development arrest 16 (EDA16); FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, ATP binding, nucleic acid binding; INVOLVED IN: embryo sac development; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related (TAIR:AT1G11100.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 90.5) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1610.0) &  (original description: no original description)","protein_coding"
"PSME_00018596-RA","No alias","Pseudotsuga menziesii","(at3g53110 : 144.0) Encodes a putative DEAD-Box RNA Helicase and has RNA-dependent ATPase activity. Mutant is Sensitive to chilling stress and heat stress. Germination of the mutant is inhibited by ABA. LOS4 may be involved in temperature sensing. Is enriched in the nuclear envelope and also located in the cytoplasm. LOS4 is involved in export of poly A RNA.; LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 4 (LOS4); FUNCTIONS IN: RNA helicase activity, RNA-dependent ATPase activity, ATP-dependent helicase activity; INVOLVED IN: poly(A)+ mRNA export from nucleus, response to cold, response to heat, response to abscisic acid stimulus; LOCATED IN: nuclear envelope, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eukaryotic initiation factor 4A-III (TAIR:AT3G19760.1); Has 40925 Blast hits to 40635 proteins in 3033 species: Archae - 702; Bacteria - 21081; Metazoa - 5720; Fungi - 4311; Plants - 2419; Viruses - 28; Other Eukaryotes - 6664 (source: NCBI BLink). & (reliability: 288.0) &  (original description: no original description)","protein_coding"
"PSME_00019301-RA","No alias","Pseudotsuga menziesii","(at4g00660 : 734.0) RNAhelicase-like 8 (RH8); FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: viral reproduction, virus-host interaction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G45810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p41380|if4a3_nicpl : 276.0) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 1468.0) &  (original description: no original description)","protein_coding"
"PSME_00019512-RA","No alias","Pseudotsuga menziesii","(at3g62310 : 1077.0) RNA helicase family protein; FUNCTIONS IN: RNA helicase activity, helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; LOCATED IN: nucleolus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase family protein (TAIR:AT2G47250.1); Has 10517 Blast hits to 9531 proteins in 1639 species: Archae - 4; Bacteria - 3473; Metazoa - 2472; Fungi - 1291; Plants - 883; Viruses - 640; Other Eukaryotes - 1754 (source: NCBI BLink). & (reliability: 2154.0) &  (original description: no original description)","protein_coding"
"PSME_00020447-RA","No alias","Pseudotsuga menziesii","(at2g44980 : 219.0) SNF2 domain-containing protein / helicase domain-containing protein; FUNCTIONS IN: transcription regulator activity, helicase activity, DNA binding, nucleic acid binding, ATP binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling factor17 (TAIR:AT5G18620.2); Has 17488 Blast hits to 15031 proteins in 1958 species: Archae - 101; Bacteria - 5047; Metazoa - 3666; Fungi - 3968; Plants - 1607; Viruses - 135; Other Eukaryotes - 2964 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 119.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 438.0) &  (original description: no original description)","protein_coding"
"PSME_00020767-RA","No alias","Pseudotsuga menziesii","(at2g02090 : 793.0) ETL1; FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling 5 (TAIR:AT2G13370.1); Has 19948 Blast hits to 16374 proteins in 2059 species: Archae - 127; Bacteria - 6550; Metazoa - 3755; Fungi - 4012; Plants - 1782; Viruses - 219; Other Eukaryotes - 3503 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 155.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1586.0) &  (original description: no original description)","protein_coding"
"PSME_00020985-RA","No alias","Pseudotsuga menziesii","(at2g28290 : 238.0) Encodes a SWI2/SNF2-like protein in the SNF2 subclass. Homozygous plants with null mutations exhibit premature termination of the meristem and carpelloid structures from the inflorescence meristem. Co-activator of floral  homeotic gene expression. Acts with LFY to regulate shoot apical meristem identity. Required for meristem maintenance. Regulates  flowering under a non-inductive photoperiod. It promotes the expression of CUC2 during cotyledon boundary formation.  Affects reproductive shoot apical meristem function by regulating the expression of WUS. In CHiP experiments SYD binds to WUS promoter. Present as two forms in the nucleus, full-length and truncated, with the latter apparently lacking the C-terminal domain. The ratio of the two forms  differs in juvenile and in adult tissues. The C-terminal domain is not required for activity.; SPLAYED (SYD); CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT3G06010.1); Has 38598 Blast hits to 29293 proteins in 2471 species: Archae - 323; Bacteria - 8462; Metazoa - 11641; Fungi - 6683; Plants - 2383; Viruses - 257; Other Eukaryotes - 8849 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 87.4) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 476.0) &  (original description: no original description)","protein_coding"
"PSME_00021159-RA","No alias","Pseudotsuga menziesii","(at3g58510 : 121.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; LOCATED IN: nucleolus, peroxisome, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G42520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 242.0) &  (original description: no original description)","protein_coding"
"PSME_00021187-RA","No alias","Pseudotsuga menziesii","(at4g18465 : 449.0) RNA helicase family protein; FUNCTIONS IN: RNA helicase activity, helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase family protein (TAIR:AT1G32490.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 898.0) &  (original description: no original description)","protein_coding"
"PSME_00021366-RA","No alias","Pseudotsuga menziesii","(at4g35740 : 274.0) Encodes RECQ3, an ATP-dependent helicase.; RecQl3; FUNCTIONS IN: ATP binding, ATP-dependent helicase activity; INVOLVED IN: DNA recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RECQ helicase L2 (TAIR:AT1G31360.1); Has 28158 Blast hits to 28089 proteins in 2765 species: Archae - 286; Bacteria - 16813; Metazoa - 3341; Fungi - 2669; Plants - 1491; Viruses - 10; Other Eukaryotes - 3548 (source: NCBI BLink). & (reliability: 548.0) &  (original description: no original description)","protein_coding"
"PSME_00021824-RA","No alias","Pseudotsuga menziesii","(at4g01020 : 85.1) helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related; FUNCTIONS IN: in 6 functions; LOCATED IN: intracellular, chloroplast; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, RING-type, conserved site (InterPro:IPR017907), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841), K Homology (InterPro:IPR004087), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, C2H2-type (InterPro:IPR007087), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related (TAIR:AT5G10370.1); Has 13197 Blast hits to 12409 proteins in 1676 species: Archae - 4; Bacteria - 3384; Metazoa - 3503; Fungi - 1989; Plants - 1444; Viruses - 760; Other Eukaryotes - 2113 (source: NCBI BLink). & (reliability: 170.2) &  (original description: no original description)","protein_coding"
"PSME_00022561-RA","No alias","Pseudotsuga menziesii","(at2g28290 : 98.6) Encodes a SWI2/SNF2-like protein in the SNF2 subclass. Homozygous plants with null mutations exhibit premature termination of the meristem and carpelloid structures from the inflorescence meristem. Co-activator of floral  homeotic gene expression. Acts with LFY to regulate shoot apical meristem identity. Required for meristem maintenance. Regulates  flowering under a non-inductive photoperiod. It promotes the expression of CUC2 during cotyledon boundary formation.  Affects reproductive shoot apical meristem function by regulating the expression of WUS. In CHiP experiments SYD binds to WUS promoter. Present as two forms in the nucleus, full-length and truncated, with the latter apparently lacking the C-terminal domain. The ratio of the two forms  differs in juvenile and in adult tissues. The C-terminal domain is not required for activity.; SPLAYED (SYD); CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT3G06010.1); Has 38598 Blast hits to 29293 proteins in 2471 species: Archae - 323; Bacteria - 8462; Metazoa - 11641; Fungi - 6683; Plants - 2383; Viruses - 257; Other Eukaryotes - 8849 (source: NCBI BLink). & (reliability: 197.2) &  (original description: no original description)","protein_coding"
"PSME_00022970-RA","No alias","Pseudotsuga menziesii","(at2g06990 : 1419.0) encodes a putative DExH-box RNA helicase that acts redundantly with HEN1, HUA1, and HUA2 in the specification of floral organ identity in the third whorl.; hua enhancer 2 (HEN2); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DSH, C-terminal (InterPro:IPR012961), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), RNA helicase, ATP-dependent, SK12/DOB1 (InterPro:IPR016438), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase, ATP-dependent, SK12/DOB1 protein (TAIR:AT1G59760.1); Has 9841 Blast hits to 8173 proteins in 1240 species: Archae - 753; Bacteria - 3176; Metazoa - 1197; Fungi - 1159; Plants - 489; Viruses - 32; Other Eukaryotes - 3035 (source: NCBI BLink). & (reliability: 2838.0) &  (original description: no original description)","protein_coding"
"PSME_00023407-RA","No alias","Pseudotsuga menziesii","(at2g28290 : 152.0) Encodes a SWI2/SNF2-like protein in the SNF2 subclass. Homozygous plants with null mutations exhibit premature termination of the meristem and carpelloid structures from the inflorescence meristem. Co-activator of floral  homeotic gene expression. Acts with LFY to regulate shoot apical meristem identity. Required for meristem maintenance. Regulates  flowering under a non-inductive photoperiod. It promotes the expression of CUC2 during cotyledon boundary formation.  Affects reproductive shoot apical meristem function by regulating the expression of WUS. In CHiP experiments SYD binds to WUS promoter. Present as two forms in the nucleus, full-length and truncated, with the latter apparently lacking the C-terminal domain. The ratio of the two forms  differs in juvenile and in adult tissues. The C-terminal domain is not required for activity.; SPLAYED (SYD); CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT3G06010.1); Has 38598 Blast hits to 29293 proteins in 2471 species: Archae - 323; Bacteria - 8462; Metazoa - 11641; Fungi - 6683; Plants - 2383; Viruses - 257; Other Eukaryotes - 8849 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 81.3) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 304.0) &  (original description: no original description)","protein_coding"
"PSME_00023417-RA","No alias","Pseudotsuga menziesii","(at1g05120 : 267.0) Helicase protein with RING/U-box domain; FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G02670.1); Has 29218 Blast hits to 14448 proteins in 1607 species: Archae - 124; Bacteria - 8622; Metazoa - 6656; Fungi - 6694; Plants - 2674; Viruses - 189; Other Eukaryotes - 4259 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 97.4) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 534.0) &  (original description: no original description)","protein_coding"
"PSME_00024625-RA","No alias","Pseudotsuga menziesii","(p41380|if4a3_nicpl : 382.0) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at3g19760 : 357.0) Encodes an RNA helicase that may be a component of the Exon Junction Complex. Subcellular localization is modulated by stress. Under normal conditions it is localized to the nuceloplasm but under hyopoxic conditions it localizes to the nucleolus and splicing speckles.; eukaryotic initiation factor 4A-III (EIF4A-III); FUNCTIONS IN: protein binding, ATP-dependent helicase activity; INVOLVED IN: mRNA processing, response to hypoxia; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G51380.1); Has 50040 Blast hits to 49280 proteins in 3163 species: Archae - 836; Bacteria - 27183; Metazoa - 6400; Fungi - 4843; Plants - 2693; Viruses - 42; Other Eukaryotes - 8043 (source: NCBI BLink). & (reliability: 714.0) &  (original description: no original description)","protein_coding"
"PSME_00027093-RA","No alias","Pseudotsuga menziesii","(q40471|if4a9_tobac : 186.0) Eukaryotic initiation factor 4A-9 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-9) (eIF-4A-9) - Nicotiana tabacum (Common tobacco) & (at3g13920 : 182.0) eukaryotic translation initiation factor 4A-1; eukaryotic translation initiation factor 4A1 (EIF4A1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eif4a-2 (TAIR:AT1G54270.2). & (reliability: 364.0) &  (original description: no original description)","protein_coding"
"PSME_00027418-RA","No alias","Pseudotsuga menziesii","(at1g05490 : 440.0) chromatin remodeling 31 (chr31); FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: chromatin remodeling 40 (TAIR:AT3G24340.1); Has 38115 Blast hits to 26256 proteins in 2107 species: Archae - 207; Bacteria - 10267; Metazoa - 11226; Fungi - 5719; Plants - 1929; Viruses - 244; Other Eukaryotes - 8523 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 93.6) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 880.0) &  (original description: no original description)","protein_coding"
"PSME_00027464-RA","No alias","Pseudotsuga menziesii","(at1g05120 : 249.0) Helicase protein with RING/U-box domain; FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G02670.1); Has 29218 Blast hits to 14448 proteins in 1607 species: Archae - 124; Bacteria - 8622; Metazoa - 6656; Fungi - 6694; Plants - 2674; Viruses - 189; Other Eukaryotes - 4259 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 85.1) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 498.0) &  (original description: no original description)","protein_coding"
"PSME_00029184-RA","No alias","Pseudotsuga menziesii","(at5g39840 : 882.0) ATP-dependent RNA helicase, mitochondrial, putative; FUNCTIONS IN: helicase activity, ATP-dependent RNA helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial degradasome RNA helicase subunit C-terminal (InterPro:IPR022192), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, mitochondrial (SUV3) (TAIR:AT4G14790.1); Has 4068 Blast hits to 4044 proteins in 754 species: Archae - 43; Bacteria - 1236; Metazoa - 267; Fungi - 388; Plants - 157; Viruses - 16; Other Eukaryotes - 1961 (source: NCBI BLink). & (reliability: 1764.0) &  (original description: no original description)","protein_coding"
"PSME_00029838-RA","No alias","Pseudotsuga menziesii","(at4g00660 : 733.0) RNAhelicase-like 8 (RH8); FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: viral reproduction, virus-host interaction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G45810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p41380|if4a3_nicpl : 277.0) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 1466.0) &  (original description: no original description)","protein_coding"
"PSME_00030086-RA","No alias","Pseudotsuga menziesii","(at2g35920 : 389.0) RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G04895.1); Has 15667 Blast hits to 10761 proteins in 1709 species: Archae - 0; Bacteria - 5024; Metazoa - 4470; Fungi - 1848; Plants - 1329; Viruses - 777; Other Eukaryotes - 2219 (source: NCBI BLink). & (reliability: 778.0) &  (original description: no original description)","protein_coding"
"PSME_00030499-RA","No alias","Pseudotsuga menziesii","(at5g22750 : 179.0) DNA repair gene. gamma-radiation hypersensitive (RAD5) involved in stable transformation and T-DNA transfer; RAD5; FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA mediated transformation; EXPRESSED IN: embryo, sperm cell, seed; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), HIP116, Rad5p N-terminal (InterPro:IPR014905), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Helicase protein with RING/U-box domain (TAIR:AT5G43530.1); Has 27107 Blast hits to 18179 proteins in 1771 species: Archae - 108; Bacteria - 7266; Metazoa - 8140; Fungi - 5089; Plants - 2446; Viruses - 173; Other Eukaryotes - 3885 (source: NCBI BLink). & (reliability: 358.0) &  (original description: no original description)","protein_coding"
"PSME_00030804-RA","No alias","Pseudotsuga menziesii","(at3g06480 : 268.0) DEAD box RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), WW/Rsp5/WWP (InterPro:IPR001202), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase 1 (TAIR:AT3G01540.4); Has 132761 Blast hits to 82344 proteins in 3707 species: Archae - 865; Bacteria - 47475; Metazoa - 37917; Fungi - 12444; Plants - 11781; Viruses - 886; Other Eukaryotes - 21393 (source: NCBI BLink). & (p46942|db10_nicsy : 268.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 536.0) &  (original description: no original description)","protein_coding"
"PSME_00032141-RA","No alias","Pseudotsuga menziesii","(at5g05450 : 347.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G71370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p46942|db10_nicsy : 117.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 638.0) &  (original description: no original description)","protein_coding"
"PSME_00034125-RA","No alias","Pseudotsuga menziesii","(at3g06480 : 620.0) DEAD box RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), WW/Rsp5/WWP (InterPro:IPR001202), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase 1 (TAIR:AT3G01540.4); Has 132761 Blast hits to 82344 proteins in 3707 species: Archae - 865; Bacteria - 47475; Metazoa - 37917; Fungi - 12444; Plants - 11781; Viruses - 886; Other Eukaryotes - 21393 (source: NCBI BLink). & (p46942|db10_nicsy : 608.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1240.0) &  (original description: no original description)","protein_coding"
"PSME_00034633-RA","No alias","Pseudotsuga menziesii","(at1g48650 : 200.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: in 6 functions; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Double-stranded RNA-binding (InterPro:IPR001159), Domain of unknown function DUF1605 (InterPro:IPR011709), Double-stranded RNA-binding-like (InterPro:IPR014720), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G01130.1); Has 12982 Blast hits to 8882 proteins in 1499 species: Archae - 14; Bacteria - 5361; Metazoa - 2913; Fungi - 1651; Plants - 997; Viruses - 50; Other Eukaryotes - 1996 (source: NCBI BLink). & (reliability: 378.0) &  (original description: no original description)","protein_coding"
"PSME_00034692-RA","No alias","Pseudotsuga menziesii","(at2g42520 : 731.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT3G58510.3); Has 140248 Blast hits to 67514 proteins in 3679 species: Archae - 1004; Bacteria - 58923; Metazoa - 37605; Fungi - 9665; Plants - 13202; Viruses - 1099; Other Eukaryotes - 18750 (source: NCBI BLink). & (p46942|db10_nicsy : 321.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1462.0) &  (original description: no original description)","protein_coding"
"PSME_00034714-RA","No alias","Pseudotsuga menziesii","(p41380|if4a3_nicpl : 604.0) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (at3g19760 : 578.0) Encodes an RNA helicase that may be a component of the Exon Junction Complex. Subcellular localization is modulated by stress. Under normal conditions it is localized to the nuceloplasm but under hyopoxic conditions it localizes to the nucleolus and splicing speckles.; eukaryotic initiation factor 4A-III (EIF4A-III); FUNCTIONS IN: protein binding, ATP-dependent helicase activity; INVOLVED IN: mRNA processing, response to hypoxia; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G51380.1); Has 50040 Blast hits to 49280 proteins in 3163 species: Archae - 836; Bacteria - 27183; Metazoa - 6400; Fungi - 4843; Plants - 2693; Viruses - 42; Other Eukaryotes - 8043 (source: NCBI BLink). & (reliability: 1156.0) &  (original description: no original description)","protein_coding"
"PSME_00034853-RA","No alias","Pseudotsuga menziesii","(at2g30800 : 852.0) Has RNA or DNA helicase activity and expressed specifically in tapetum and vascular tissue. First identified member of a new group of the mle helicase group of the DEAH family.; helicase in vascular tissue and tapetum (HVT1); CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), Ankyrin repeat-containing domain (InterPro:IPR020683), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Single-stranded nucleic acid binding R3H (InterPro:IPR001374), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: nuclear DEIH-boxhelicase (TAIR:AT1G06670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1704.0) &  (original description: no original description)","protein_coding"
"PSME_00035120-RA","No alias","Pseudotsuga menziesii","(at2g01440 : 349.0) DEAD/DEAH box RNA helicase family protein ; FUNCTIONS IN: ATP-dependent DNA helicase activity, helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: DNA repair, DNA recombination; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), DNA helicase, ATP-dependent, RecG (InterPro:IPR004609), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD/DEAH box helicase, putative (TAIR:AT3G02060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 698.0) &  (original description: no original description)","protein_coding"
"PSME_00036350-RA","No alias","Pseudotsuga menziesii","(at3g06980 : 229.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RH39 (TAIR:AT4G09730.1); Has 36871 Blast hits to 36254 proteins in 2997 species: Archae - 517; Bacteria - 17572; Metazoa - 5953; Fungi - 4324; Plants - 2343; Viruses - 14; Other Eukaryotes - 6148 (source: NCBI BLink). & (reliability: 458.0) &  (original description: no original description)","protein_coding"
"PSME_00036706-RA","No alias","Pseudotsuga menziesii","(at2g42520 : 771.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT3G58510.3); Has 140248 Blast hits to 67514 proteins in 3679 species: Archae - 1004; Bacteria - 58923; Metazoa - 37605; Fungi - 9665; Plants - 13202; Viruses - 1099; Other Eukaryotes - 18750 (source: NCBI BLink). & (p46942|db10_nicsy : 328.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1542.0) &  (original description: no original description)","protein_coding"
"PSME_00036962-RA","No alias","Pseudotsuga menziesii","(at3g53110 : 218.0) Encodes a putative DEAD-Box RNA Helicase and has RNA-dependent ATPase activity. Mutant is Sensitive to chilling stress and heat stress. Germination of the mutant is inhibited by ABA. LOS4 may be involved in temperature sensing. Is enriched in the nuclear envelope and also located in the cytoplasm. LOS4 is involved in export of poly A RNA.; LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 4 (LOS4); FUNCTIONS IN: RNA helicase activity, RNA-dependent ATPase activity, ATP-dependent helicase activity; INVOLVED IN: poly(A)+ mRNA export from nucleus, response to cold, response to heat, response to abscisic acid stimulus; LOCATED IN: nuclear envelope, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eukaryotic initiation factor 4A-III (TAIR:AT3G19760.1); Has 40925 Blast hits to 40635 proteins in 3033 species: Archae - 702; Bacteria - 21081; Metazoa - 5720; Fungi - 4311; Plants - 2419; Viruses - 28; Other Eukaryotes - 6664 (source: NCBI BLink). & (p41380|if4a3_nicpl : 124.0) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) - Nicotiana plumbaginifolia (Leadwort-leaved tobacco) & (reliability: 436.0) &  (original description: no original description)","protein_coding"
"PSME_00037049-RA","No alias","Pseudotsuga menziesii","(at3g58570 : 405.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G42520.1); Has 86488 Blast hits to 59724 proteins in 3531 species: Archae - 886; Bacteria - 35070; Metazoa - 23291; Fungi - 6787; Plants - 8100; Viruses - 385; Other Eukaryotes - 11969 (source: NCBI BLink). & (p46942|db10_nicsy : 196.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 810.0) &  (original description: no original description)","protein_coding"
"PSME_00038355-RA","No alias","Pseudotsuga menziesii","(at4g01020 : 1407.0) helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related; FUNCTIONS IN: in 6 functions; LOCATED IN: intracellular, chloroplast; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, RING-type, conserved site (InterPro:IPR017907), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841), K Homology (InterPro:IPR004087), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, C2H2-type (InterPro:IPR007087), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related (TAIR:AT5G10370.1); Has 13197 Blast hits to 12409 proteins in 1676 species: Archae - 4; Bacteria - 3384; Metazoa - 3503; Fungi - 1989; Plants - 1444; Viruses - 760; Other Eukaryotes - 2113 (source: NCBI BLink). & (reliability: 2814.0) &  (original description: no original description)","protein_coding"
"PSME_00039230-RA","No alias","Pseudotsuga menziesii","(at3g02065 : 583.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, HIT-type (InterPro:IPR007529), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G42520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p46942|db10_nicsy : 216.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1166.0) &  (original description: no original description)","protein_coding"
"PSME_00039397-RA","No alias","Pseudotsuga menziesii","(at1g05120 : 259.0) Helicase protein with RING/U-box domain; FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G02670.1); Has 29218 Blast hits to 14448 proteins in 1607 species: Archae - 124; Bacteria - 8622; Metazoa - 6656; Fungi - 6694; Plants - 2674; Viruses - 189; Other Eukaryotes - 4259 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 89.7) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 518.0) &  (original description: no original description)","protein_coding"
"PSME_00039428-RA","No alias","Pseudotsuga menziesii","(at3g22330 : 530.0) DEAD-box protein required for efficient group II  intron splicing in mitochondria.; putative mitochondrial RNA helicase 2 (PMH2); FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; INVOLVED IN: response to cold, Group II intron splicing; LOCATED IN: mitochondrion, nucleolus, cell wall, protein complex; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase (RH3) (TAIR:AT5G26742.2); Has 113280 Blast hits to 72794 proteins in 3598 species: Archae - 1390; Bacteria - 52148; Metazoa - 22767; Fungi - 9352; Plants - 8202; Viruses - 661; Other Eukaryotes - 18760 (source: NCBI BLink). & (q41382|rh7_spiol : 265.0) DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) & (reliability: 1060.0) &  (original description: no original description)","protein_coding"
"PSME_00039480-RA","No alias","Pseudotsuga menziesii","(at1g01220 : 637.0) Encodes a bifunctional enzyme that has both L-fucokinase and GDP-L-fucose pyrophosphorylase activities. It catalyzes the two steps of the L-fucose salvage pathway for the generation of activated GDP-L-fucose. This pathway seems to be of minor importance for cell wall polysaccharide biosynthesis compared to the de novo GDP-L-fucose biosynthesis pathway in Arabidopsis.; L-fucokinase/GDP-L-fucose pyrophosphorylase (FKGP); FUNCTIONS IN: fucose-1-phosphate guanylyltransferase activity, fucokinase activity, ATP binding, galactokinase activity; INVOLVED IN: GDP-L-fucose salvage; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mevalonate/galactokinase (InterPro:IPR006206), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), L-fucokinase (InterPro:IPR012887), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), GHMP kinase, C-terminal (InterPro:IPR013750); Has 1878 Blast hits to 1819 proteins in 539 species: Archae - 59; Bacteria - 918; Metazoa - 155; Fungi - 3; Plants - 87; Viruses - 3; Other Eukaryotes - 653 (source: NCBI BLink). & (reliability: 1274.0) &  (original description: no original description)","protein_coding"
"PSME_00040391-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00040415-RA","No alias","Pseudotsuga menziesii","(at3g01540 : 682.0) RNA HELICASE DRH1; DEAD box RNA helicase 1 (DRH1); FUNCTIONS IN: ATPase activity, ATP-dependent RNA helicase activity; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), WW/Rsp5/WWP (InterPro:IPR001202), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEAD box RNA helicase family protein (TAIR:AT5G14610.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p46942|db10_nicsy : 678.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1364.0) &  (original description: no original description)","protein_coding"
"PSME_00040441-RA","No alias","Pseudotsuga menziesii","(at4g01020 : 249.0) helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related; FUNCTIONS IN: in 6 functions; LOCATED IN: intracellular, chloroplast; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, RING-type, conserved site (InterPro:IPR017907), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841), K Homology (InterPro:IPR004087), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, C2H2-type (InterPro:IPR007087), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related (TAIR:AT5G10370.1); Has 13197 Blast hits to 12409 proteins in 1676 species: Archae - 4; Bacteria - 3384; Metazoa - 3503; Fungi - 1989; Plants - 1444; Viruses - 760; Other Eukaryotes - 2113 (source: NCBI BLink). & (reliability: 498.0) &  (original description: no original description)","protein_coding"
"PSME_00041255-RA","No alias","Pseudotsuga menziesii","(at3g02065 : 581.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, HIT-type (InterPro:IPR007529), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G42520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (p46942|db10_nicsy : 212.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1162.0) &  (original description: no original description)","protein_coding"
"PSME_00041256-RA","No alias","Pseudotsuga menziesii","(at3g02065 : 163.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Zinc finger, HIT-type (InterPro:IPR007529), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G42520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q41382|rh7_spiol : 85.9) DEAD-box ATP-dependent RNA helicase 7 (EC 3.6.1.-) - Spinacia oleracea (Spinach) & (reliability: 326.0) &  (original description: no original description)","protein_coding"
"PSME_00041551-RA","No alias","Pseudotsuga menziesii","(q41741|if4a_maize : 513.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Zea mays (Maize) & (at3g13920 : 508.0) eukaryotic translation initiation factor 4A-1; eukaryotic translation initiation factor 4A1 (EIF4A1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eif4a-2 (TAIR:AT1G54270.2). & (reliability: 1016.0) &  (original description: no original description)","protein_coding"
"PSME_00041552-RA","No alias","Pseudotsuga menziesii","(p35683|if4a_orysa : 697.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Oryza sativa (Rice) & (at3g13920 : 690.0) eukaryotic translation initiation factor 4A-1; eukaryotic translation initiation factor 4A1 (EIF4A1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eif4a-2 (TAIR:AT1G54270.2). & (reliability: 1380.0) &  (original description: no original description)","protein_coding"
"PSME_00042380-RA","No alias","Pseudotsuga menziesii","(q41741|if4a_maize : 502.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Zea mays (Maize) & (at3g13920 : 496.0) eukaryotic translation initiation factor 4A-1; eukaryotic translation initiation factor 4A1 (EIF4A1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eif4a-2 (TAIR:AT1G54270.2). & (reliability: 992.0) &  (original description: no original description)","protein_coding"
"PSME_00043687-RA","No alias","Pseudotsuga menziesii","(p35683|if4a_orysa : 721.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Oryza sativa (Rice) & (at1g54270 : 709.0) member of eIF4A - eukaryotic initiation factor 4A; eif4a-2 (EIF4A-2); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 4A1 (TAIR:AT3G13920.4). & (reliability: 1418.0) &  (original description: no original description)","protein_coding"
"PSME_00043842-RA","No alias","Pseudotsuga menziesii","(at1g16280 : 97.8) RNA helicase 36 (RH36); FUNCTIONS IN: helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; INVOLVED IN: post-embryonic development, embryo sac development, rRNA processing; LOCATED IN: nucleus; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 43946 Blast hits to 42938 proteins in 3095 species: Archae - 969; Bacteria - 21832; Metazoa - 6240; Fungi - 4948; Plants - 2606; Viruses - 36; Other Eukaryotes - 7315 (source: NCBI BLink). & (reliability: 195.6) &  (original description: no original description)","protein_coding"
"PSME_00043875-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00043918-RA","No alias","Pseudotsuga menziesii","(at1g29900 : 142.0) carbamoyl phosphate synthetase large chain (CARB) mRNA,; carbamoyl phosphate synthetase B (CARB); FUNCTIONS IN: catalytic activity, ATP binding; INVOLVED IN: cellular response to phosphate starvation, arginine biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbamoyl phosphate synthase, large subunit, N-terminal (InterPro:IPR005481), Carbamoyl phosphate synthetase, large subunit, ATP-binding (InterPro:IPR005479), MGS-like (InterPro:IPR011607), PreATP-grasp-like fold (InterPro:IPR016185), Carbamoyl phosphate synthetase, large subunit, oligomerisation (InterPro:IPR005480), Carbamoyl phosphate synthase, large subunit, glutamine-dependent (InterPro:IPR006275), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Carbamoyl phosphate synthase, large subunit (InterPro:IPR005483), Pre-ATP-grasp fold (InterPro:IPR013817); BEST Arabidopsis thaliana protein match is: acetyl-CoA carboxylase 2 (TAIR:AT1G36180.1); Has 49576 Blast hits to 29968 proteins in 5011 species: Archae - 665; Bacteria - 22536; Metazoa - 6475; Fungi - 1021; Plants - 476; Viruses - 0; Other Eukaryotes - 18403 (source: NCBI BLink). & (reliability: 284.0) &  (original description: no original description)","protein_coding"
"PSME_00044513-RA","No alias","Pseudotsuga menziesii","(at3g58570 : 87.4) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G42520.1); Has 86488 Blast hits to 59724 proteins in 3531 species: Archae - 886; Bacteria - 35070; Metazoa - 23291; Fungi - 6787; Plants - 8100; Viruses - 385; Other Eukaryotes - 11969 (source: NCBI BLink). & (reliability: 174.8) &  (original description: no original description)","protein_coding"
"PSME_00045843-RA","No alias","Pseudotsuga menziesii","(at3g58510 : 120.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; LOCATED IN: nucleolus, peroxisome, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G42520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 240.0) &  (original description: no original description)","protein_coding"
"PSME_00046222-RA","No alias","Pseudotsuga menziesii","(at2g47330 : 952.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G20920.1); Has 46798 Blast hits to 46047 proteins in 3085 species: Archae - 817; Bacteria - 24489; Metazoa - 6167; Fungi - 4661; Plants - 2616; Viruses - 11; Other Eukaryotes - 8037 (source: NCBI BLink). & (p46942|db10_nicsy : 328.0) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-) - Nicotiana sylvestris (Wood tobacco) & (reliability: 1904.0) &  (original description: no original description)","protein_coding"
"PSME_00047772-RA","No alias","Pseudotsuga menziesii","(p35683|if4a_orysa : 693.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Oryza sativa (Rice) & (at3g13920 : 687.0) eukaryotic translation initiation factor 4A-1; eukaryotic translation initiation factor 4A1 (EIF4A1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eif4a-2 (TAIR:AT1G54270.2). & (reliability: 1374.0) &  (original description: no original description)","protein_coding"
"PSME_00047834-RA","No alias","Pseudotsuga menziesii","(p35683|if4a_orysa : 700.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Oryza sativa (Rice) & (at3g13920 : 693.0) eukaryotic translation initiation factor 4A-1; eukaryotic translation initiation factor 4A1 (EIF4A1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eif4a-2 (TAIR:AT1G54270.2). & (reliability: 1386.0) &  (original description: no original description)","protein_coding"
"PSME_00047883-RA","No alias","Pseudotsuga menziesii","(p35683|if4a_orysa : 697.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Oryza sativa (Rice) & (at3g13920 : 691.0) eukaryotic translation initiation factor 4A-1; eukaryotic translation initiation factor 4A1 (EIF4A1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eif4a-2 (TAIR:AT1G54270.2). & (reliability: 1382.0) &  (original description: no original description)","protein_coding"
"PSME_00048066-RA","No alias","Pseudotsuga menziesii","(at3g58510 : 133.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; LOCATED IN: nucleolus, peroxisome, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G42520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 266.0) &  (original description: no original description)","protein_coding"
"PSME_00048282-RA","No alias","Pseudotsuga menziesii","(at3g58510 : 96.7) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; LOCATED IN: nucleolus, peroxisome, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G42520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 193.4) &  (original description: no original description)","protein_coding"
"PSME_00048514-RA","No alias","Pseudotsuga menziesii","(at3g58510 : 132.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; LOCATED IN: nucleolus, peroxisome, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G42520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q7xp59|glr31_orysa : 102.0) Glutamate receptor 3.1 precursor (Ligand-gated ion channel 3.1) - Oryza sativa (Rice) & (reliability: 264.0) &  (original description: no original description)","protein_coding"
"PSME_00048644-RA","No alias","Pseudotsuga menziesii","(p41382|if410_tobac : 181.0) Eukaryotic initiation factor 4A-10 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-10) (eIF-4A-10) - Nicotiana tabacum (Common tobacco) & (at3g13920 : 178.0) eukaryotic translation initiation factor 4A-1; eukaryotic translation initiation factor 4A1 (EIF4A1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eif4a-2 (TAIR:AT1G54270.2). & (reliability: 356.0) &  (original description: no original description)","protein_coding"
"PSME_00049527-RA","No alias","Pseudotsuga menziesii","(q40467|if414_tobac : 756.0) Eukaryotic initiation factor 4A-14 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-14) (eIF-4A-14) - Nicotiana tabacum (Common tobacco) & (at1g54270 : 743.0) member of eIF4A - eukaryotic initiation factor 4A; eif4a-2 (EIF4A-2); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 4A1 (TAIR:AT3G13920.4). & (reliability: 1486.0) &  (original description: no original description)","protein_coding"
"PSME_00049912-RA","No alias","Pseudotsuga menziesii","(at2g32390 : 138.0) Encodes a ionotropic glutamate receptor ortholog, a member of a putative ligand-gated ion channel subunit family; glutamate receptor  3.5 (GLR3.5); FUNCTIONS IN: intracellular ligand-gated ion channel activity; INVOLVED IN: cellular calcium ion homeostasis, response to light stimulus; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Extracellular solute-binding protein, family 3 (InterPro:IPR001638), Ionotropic glutamate receptor (InterPro:IPR001320), GPCR, family 3, gamma-aminobutyric acid receptor, type B (InterPro:IPR002455), Extracellular ligand-binding receptor (InterPro:IPR001828), Glutamate receptor-related (InterPro:IPR015683), Ionotropic glutamate-like receptor, plant (InterPro:IPR017103); BEST Arabidopsis thaliana protein match is: glutamate receptor 3.4 (TAIR:AT1G05200.2). & (q7xp59|glr31_orysa : 114.0) Glutamate receptor 3.1 precursor (Ligand-gated ion channel 3.1) - Oryza sativa (Rice) & (reliability: 254.0) &  (original description: no original description)","protein_coding"
"PSME_00049962-RA","No alias","Pseudotsuga menziesii","(at4g15850 : 169.0) plant DEAD box-like RNA helicase.; RNA helicase 1 (RH1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT4G16630.1); Has 38711 Blast hits to 38056 proteins in 2969 species: Archae - 603; Bacteria - 19125; Metazoa - 5736; Fungi - 4393; Plants - 2535; Viruses - 13; Other Eukaryotes - 6306 (source: NCBI BLink). & (reliability: 338.0) &  (original description: no original description)","protein_coding"
"PSME_00050090-RA","No alias","Pseudotsuga menziesii","(at3g58510 : 132.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; LOCATED IN: nucleolus, peroxisome, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G42520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 264.0) &  (original description: no original description)","protein_coding"
"PSME_00050148-RA","No alias","Pseudotsuga menziesii","(at3g09720 : 193.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, nucleic acid binding, ATP binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 47831 Blast hits to 47082 proteins in 3124 species: Archae - 967; Bacteria - 25249; Metazoa - 6167; Fungi - 4801; Plants - 2681; Viruses - 34; Other Eukaryotes - 7932 (source: NCBI BLink). & (reliability: 386.0) &  (original description: no original description)","protein_coding"
"PSME_00050161-RA","No alias","Pseudotsuga menziesii","(at2g32390 : 138.0) Encodes a ionotropic glutamate receptor ortholog, a member of a putative ligand-gated ion channel subunit family; glutamate receptor  3.5 (GLR3.5); FUNCTIONS IN: intracellular ligand-gated ion channel activity; INVOLVED IN: cellular calcium ion homeostasis, response to light stimulus; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Extracellular solute-binding protein, family 3 (InterPro:IPR001638), Ionotropic glutamate receptor (InterPro:IPR001320), GPCR, family 3, gamma-aminobutyric acid receptor, type B (InterPro:IPR002455), Extracellular ligand-binding receptor (InterPro:IPR001828), Glutamate receptor-related (InterPro:IPR015683), Ionotropic glutamate-like receptor, plant (InterPro:IPR017103); BEST Arabidopsis thaliana protein match is: glutamate receptor 3.4 (TAIR:AT1G05200.2). & (q7xp59|glr31_orysa : 104.0) Glutamate receptor 3.1 precursor (Ligand-gated ion channel 3.1) - Oryza sativa (Rice) & (reliability: 268.0) &  (original description: no original description)","protein_coding"
"PSME_00051106-RA","No alias","Pseudotsuga menziesii","(at3g58570 : 125.0) P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G42520.1); Has 86488 Blast hits to 59724 proteins in 3531 species: Archae - 886; Bacteria - 35070; Metazoa - 23291; Fungi - 6787; Plants - 8100; Viruses - 385; Other Eukaryotes - 11969 (source: NCBI BLink). & (reliability: 250.0) &  (original description: no original description)","protein_coding"
"PSME_00051380-RA","No alias","Pseudotsuga menziesii","(at1g20960 : 1382.0) embryo defective 1507 (emb1507); FUNCTIONS IN: in 6 functions; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Sec63 domain (InterPro:IPR004179), Sec63 domain, subgroup (InterPro:IPR018127), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: U5 small nuclear ribonucleoprotein helicase (TAIR:AT2G42270.1). & (reliability: 2764.0) &  (original description: no original description)","protein_coding"
"PSME_00053286-RA","No alias","Pseudotsuga menziesii","(at1g32490 : 593.0) Encodes a homolog of the yeast PRP2 protein, one of four related DEAH RNA helicases identified as essential cofactors for RNA splicing.; ENHANCED SILENCING PHENOTYPE 3 (ESP3); FUNCTIONS IN: helicase activity, ATP-dependent RNA helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding; INVOLVED IN: RNA splicing, posttranscriptional gene silencing by RNA, embryo development ending in seed dormancy; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: helicase domain-containing protein (TAIR:AT2G35340.1). & (reliability: 1186.0) &  (original description: no original description)","protein_coding"
"PSME_00053400-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00055275-RA","No alias","Pseudotsuga menziesii","(q41741|if4a_maize : 431.0) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) - Zea mays (Maize) & (at1g72730 : 427.0) DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, plasma membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 4A1 (TAIR:AT3G13920.1); Has 48726 Blast hits to 48144 proteins in 3104 species: Archae - 749; Bacteria - 26664; Metazoa - 6044; Fungi - 4769; Plants - 2616; Viruses - 17; Other Eukaryotes - 7867 (source: NCBI BLink). & (reliability: 854.0) &  (original description: no original description)","protein_coding"
"PSME_00055514-RA","No alias","Pseudotsuga menziesii","(q40471|if4a9_tobac : 187.0) Eukaryotic initiation factor 4A-9 (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-9) (eIF-4A-9) - Nicotiana tabacum (Common tobacco) & (at3g13920 : 184.0) eukaryotic translation initiation factor 4A-1; eukaryotic translation initiation factor 4A1 (EIF4A1); CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: eif4a-2 (TAIR:AT1G54270.2). & (reliability: 368.0) &  (original description: no original description)","protein_coding"
"Seita.1G005500.1","No alias","Setaria italica ","RNA helicase *(Brr2)","protein_coding"
"Seita.1G019300.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G034800.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G044600.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G087700.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G089900.1","No alias","Setaria italica ","mRNA unwinding factor *(eIF4A))","protein_coding"
"Seita.1G093000.1","No alias","Setaria italica ","helicase component *(RecQ4A) of RTR Holliday junction dissolution complex","protein_coding"
"Seita.1G136100.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G178200.1","No alias","Setaria italica ","chromatin remodeling factor *(Rad5)","protein_coding"
"Seita.1G235400.1","No alias","Setaria italica ","DNA helicase *(RCK/MER3)","protein_coding"
"Seita.1G246400.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G250700.1","No alias","Setaria italica ","DDX6-type mRNA helicase *(RH12/RH8)","protein_coding"
"Seita.1G254800.1","No alias","Setaria italica ","regulatory protein *(CLSY3/4) of transacting siRNA pathway","protein_coding"
"Seita.1G278400.1","No alias","Setaria italica ","ATPase component *(PIE1) of SWR1 chromatin remodeling complex","protein_coding"
"Seita.1G293300.1","No alias","Setaria italica ","DNA translocase *(RecG)","protein_coding"
"Seita.1G312500.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G329800.1","No alias","Setaria italica ","chromatin remodeling factor *(RAD54)","protein_coding"
"Seita.1G340900.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G350700.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G374000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.1G377900.1","No alias","Setaria italica ","helicase component *(eIF4A3) of RNA quality control Exon Junction complex","protein_coding"
"Seita.2G023300.1","No alias","Setaria italica ","chromatin remodeling factor *(DDM1)","protein_coding"
"Seita.2G030000.1","No alias","Setaria italica ","group-II intron splicing RNA helicase *(PMH)","protein_coding"
"Seita.2G035800.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G076400.1","No alias","Setaria italica ","sRNA cargo-loading helicase *(RH11/37) of extracellular vesicle trafficking","protein_coding"
"Seita.2G109600.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G194600.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G227500.1","No alias","Setaria italica ","SMARCA component *(SYD/BRM/MINU)","protein_coding"
"Seita.2G227600.1","No alias","Setaria italica ","SMARCA component *(SYD/BRM/MINU)","protein_coding"
"Seita.2G278900.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G297900.1","No alias","Setaria italica ","chromatin remodeling factor *(Rad5) & chromatin remodeling factor *(Ris1)","protein_coding"
"Seita.2G320900.1","No alias","Setaria italica ","CHD3-type chromatin remodeling factor *(PKL/PKR)","protein_coding"
"Seita.2G326100.1","No alias","Setaria italica ","RNA helicase *(Prp16)","protein_coding"
"Seita.2G328700.1","No alias","Setaria italica ","chromatin remodeling factor *(Rad5-like)","protein_coding"
"Seita.2G332500.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G378100.1","No alias","Setaria italica ","chromatin remodeling factor *(SMARCAL1)","protein_coding"
"Seita.2G385100.1","No alias","Setaria italica ","crosslink repair helicase *(HRQ1)","protein_coding"
"Seita.2G385500.1","No alias","Setaria italica ","regulatory RNA helicase *(RH27/RH51) of miRNA biogenesis pathway & component *(eS21) of small ribosomal-subunit (SSU) proteome","protein_coding"
"Seita.2G394100.1","No alias","Setaria italica ","E3 ubiquitin ligase *(RBR-Helicase)","protein_coding"
"Seita.2G403000.1","No alias","Setaria italica ","SSU processome assembly factor *(SWA3)","protein_coding"
"Seita.2G405000.1","No alias","Setaria italica ","chromatin remodeling factor *(SMARCAL1)","protein_coding"
"Seita.2G409900.1","No alias","Setaria italica ","chromatin remodeling factor *(Rad5)","protein_coding"
"Seita.2G413900.1","No alias","Setaria italica ","rRNA biogenesis RNA helicase *(ROK1)","protein_coding"
"Seita.2G419600.1","No alias","Setaria italica ","component *(CHR5) of SAGA transcription co-activator complex & CHD1-type chromatin remodeling factor *(CHR5)","protein_coding"
"Seita.2G435000.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.2G442300.1","No alias","Setaria italica ","RDR2-polymerase accessory protein *(CLSY1/2)","protein_coding"
"Seita.3G001300.1","No alias","Setaria italica ","chromatin remodeling factor *(ERCC6)","protein_coding"
"Seita.3G037100.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G058900.1","No alias","Setaria italica ","SMARCA component *(SYD/BRM/MINU)","protein_coding"
"Seita.3G120700.1","No alias","Setaria italica ","helicase UAP56","protein_coding"
"Seita.3G121500.1","No alias","Setaria italica ","chromatin remodeling factor *(Mot1) & TATA box-binding protein-associated factor *(MOT1)","protein_coding"
"Seita.3G152600.1","No alias","Setaria italica ","RNA helicase *(Prp2)","protein_coding"
"Seita.3G197600.1","No alias","Setaria italica ","chromatin remodeling factor *(Rad5) & chromatin remodeling factor *(Ris1)","protein_coding"
"Seita.3G235600.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G254300.1","No alias","Setaria italica ","regulatory protein *(CLSY3/4) of transacting siRNA pathway","protein_coding"
"Seita.3G256300.1","No alias","Setaria italica ","RNA helicase *(Prp2)","protein_coding"
"Seita.3G311900.1","No alias","Setaria italica ","DNA polymerase theta *(TEB)","protein_coding"
"Seita.3G322400.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.3G386700.1","No alias","Setaria italica ","group-II intron splicing RNA helicase *(PMH)","protein_coding"
"Seita.4G003400.1","No alias","Setaria italica ","RNA helicase component *(MTR4) of TRAMP nucleolar regulation complex","protein_coding"
"Seita.4G042700.1","No alias","Setaria italica ","RNA helicase *(Prp22)","protein_coding"
"Seita.4G050000.1","No alias","Setaria italica ","CHD3-type chromatin remodeling factor *(PKL/PKR)","protein_coding"
"Seita.4G112400.1","No alias","Setaria italica ","SMARCA component *(SYD/BRM/MINU)","protein_coding"
"Seita.4G158300.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.4G167800.1","No alias","Setaria italica ","mRNA helicase *(RH31)","protein_coding"
"Seita.4G223800.1","No alias","Setaria italica ","sRNA cargo-loading helicase *(RH11/37) of extracellular vesicle trafficking","protein_coding"
"Seita.4G242200.1","No alias","Setaria italica ","mRNA unwinding factor *(eIF4A))","protein_coding"
"Seita.5G056900.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G067700.1","No alias","Setaria italica ","DNA repair protein *(CSB/ERCC6) & chromatin remodeling factor *(ERCC6)","protein_coding"
"Seita.5G079500.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G114600.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G121700.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G125200.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G131500.1","No alias","Setaria italica ","23S-rRNA maturation helicase *(RH39)","protein_coding"
"Seita.5G139400.1","No alias","Setaria italica ","regulatory RNA helicase *(RH20/RH30) of virus replication","protein_coding"
"Seita.5G148400.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G166800.1","No alias","Setaria italica ","ATPase component *(CHR11/CHR17) of ISWI chromatin remodeling complexes","protein_coding"
"Seita.5G197200.1","No alias","Setaria italica ","helicase UAP56","protein_coding"
"Seita.5G197900.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G216200.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G229000.1","No alias","Setaria italica ","mRNA helicase *(RH31)","protein_coding"
"Seita.5G229100.1","No alias","Setaria italica ","mRNA helicase *(RH31)","protein_coding"
"Seita.5G331500.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G339900.1","No alias","Setaria italica ","chromatin remodeling factor *(Ris1)","protein_coding"
"Seita.5G402900.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G422300.1","No alias","Setaria italica ","endoribonuclease *(DCL3)","protein_coding"
"Seita.5G423600.1","No alias","Setaria italica ","regulatory RNA helicase *(RH20/RH30) of virus replication","protein_coding"
"Seita.5G455100.1","No alias","Setaria italica ","chromatin remodeling factor *(SHPRH)","protein_coding"
"Seita.6G053500.1","No alias","Setaria italica ","RNA helicase *(RCF1)","protein_coding"
"Seita.6G109100.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.6G145100.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.6G237900.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.7G030800.1","No alias","Setaria italica ","chromatin remodeling factor *(Rad5)","protein_coding"
"Seita.7G100900.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.7G123800.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.7G144400.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.7G162200.1","No alias","Setaria italica ","endoribonuclease (DCL4) of transacting siRNA pathway & component *(DRB7) of DRB4-DRB7.1 siRNA biogenesis regulator complex","protein_coding"
"Seita.7G162500.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.7G179700.1","No alias","Setaria italica ","DDX6-type mRNA helicase *(RH12/RH8)","protein_coding"
"Seita.7G200700.1","No alias","Setaria italica ","ATPase component *(Etl1)","protein_coding"
"Seita.7G248300.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.7G248400.1","No alias","Setaria italica ","chromatin remodeling factor *(Rad5) & chromatin remodeling factor *(Ris1)","protein_coding"
"Seita.8G054400.1","No alias","Setaria italica ","RNA helicase component *(HEN2) of Nuclear Exosome Targeting (NEXT) activation complex","protein_coding"
"Seita.8G057700.1","No alias","Setaria italica ","DNA translocase component *(FANCM) of FANCM-MHF DNA remodeling complex","protein_coding"
"Seita.8G109400.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.8G140800.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.8G175400.1","No alias","Setaria italica ","sRNA cargo-loading helicase *(RH11/37) of extracellular vesicle trafficking","protein_coding"
"Seita.8G228800.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.8G229300.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.8G239700.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.8G252800.1","No alias","Setaria italica ","component *(MED34) of MEDIATOR transcription co-activator complex","protein_coding"
"Seita.9G027200.1","No alias","Setaria italica ","group-II intron splicing RNA helicase *(RH3)","protein_coding"
"Seita.9G047600.1","No alias","Setaria italica ","sRNA cargo-loading helicase *(RH11/37) of extracellular vesicle trafficking","protein_coding"
"Seita.9G049900.1","No alias","Setaria italica ","regulatory RNA helicase *(RH27/RH51) of miRNA biogenesis pathway","protein_coding"
"Seita.9G092100.1","No alias","Setaria italica ","group-I intron splicing RNA helicase *(ABO6)","protein_coding"
"Seita.9G095100.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G108300.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G112500.1","No alias","Setaria italica ","chromatin remodeling factor *(DDM1)","protein_coding"
"Seita.9G121600.1","No alias","Setaria italica ","RNA helicase *(SMA1)","protein_coding"
"Seita.9G128200.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G179200.1","No alias","Setaria italica ","endoribonuclease (DCL2) of transacting siRNA pathway","protein_coding"
"Seita.9G188400.1","No alias","Setaria italica ","chromatin remodeling factor *(ERCC6)","protein_coding"
"Seita.9G200400.1","No alias","Setaria italica ","DDX6-type mRNA helicase *(RH12/RH8)","protein_coding"
"Seita.9G215300.1","No alias","Setaria italica ","endoribonuclease *(DCL3)","protein_coding"
"Seita.9G225800.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G232900.1","No alias","Setaria italica ","chromatin remodeling factor *(ATRX)","protein_coding"
"Seita.9G302200.1","No alias","Setaria italica ","component *(DRD1) of DNA methylation accessory complex","protein_coding"
"Seita.9G402800.1","No alias","Setaria italica ","ATPase component *(Ino80) of chromatin remodelling complex","protein_coding"
"Seita.9G426000.1","No alias","Setaria italica ","RNA helicase Prp43 of Intron-Lariat Spliceosome complex","protein_coding"
"Seita.9G428600.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G461000.1","No alias","Setaria italica ","RDR2-polymerase accessory protein *(CLSY1/2) & regulatory protein *(CLSY3/4) of transacting siRNA pathway","protein_coding"
"Seita.9G492000.1","No alias","Setaria italica ","RNA helicase *(Brr2)","protein_coding"
"Seita.9G529000.1","No alias","Setaria italica ","component *(DRD1) of DNA methylation accessory complex","protein_coding"
"Seita.9G534300.1","No alias","Setaria italica ","ATP-dependent helicase *(DBP5/LOS4)","protein_coding"
"Seita.9G562200.1","No alias","Setaria italica ","endoribonuclease component *(DCL1) of DCL1-HYL1 miRNA biogenesis complex","protein_coding"
"Seita.9G563300.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G566900.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G573100.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.9G578200.1","No alias","Setaria italica ","chromatin remodeling factor *(ALC1)","protein_coding"
"Sobic.001G028100.1","No alias","Sorghum bicolor ","group-II intron splicing RNA helicase *(RH3)","protein_coding"
"Sobic.001G028200.1","No alias","Sorghum bicolor ","RNA helicase *(Brr2)","protein_coding"
"Sobic.001G049500.1","No alias","Sorghum bicolor ","sRNA cargo-loading helicase *(RH11/37) of extracellular vesicle trafficking","protein_coding"
"Sobic.001G051500.1","No alias","Sorghum bicolor ","regulatory RNA helicase *(RH27/RH51) of miRNA biogenesis pathway","protein_coding"
"Sobic.001G089600.1","No alias","Sorghum bicolor ","group-I intron splicing RNA helicase *(ABO6)","protein_coding"
"Sobic.001G092200.3","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G105200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G109700.1","No alias","Sorghum bicolor ","chromatin remodeling factor *(DDM1)","protein_coding"
"Sobic.001G119900.1","No alias","Sorghum bicolor ","RNA helicase *(SMA1)","protein_coding"
"Sobic.001G126400.1","No alias","Sorghum bicolor ","regulatory RNA helicase *(RH27/RH51) of miRNA biogenesis pathway","protein_coding"
"Sobic.001G180000.2","No alias","Sorghum bicolor ","endoribonuclease (DCL2) of transacting siRNA pathway","protein_coding"
"Sobic.001G191500.1","No alias","Sorghum bicolor ","chromatin remodeling factor *(ERCC6)","protein_coding"
"Sobic.001G201400.2","No alias","Sorghum bicolor ","DDX6-type mRNA helicase *(RH12/RH8)","protein_coding"
"Sobic.001G201500.1","No alias","Sorghum bicolor ","DDX6-type mRNA helicase *(RH12/RH8)","protein_coding"
"Sobic.001G214000.1","No alias","Sorghum bicolor ","endoribonuclease *(DCL3)","protein_coding"
"Sobic.001G222500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G230000.1","No alias","Sorghum bicolor ","chromatin remodeling factor *(ATRX)","protein_coding"
"Sobic.001G275300.1","No alias","Sorghum bicolor ","component *(MED34) of MEDIATOR transcription co-activator complex","protein_coding"
"Sobic.001G370900.2","No alias","Sorghum bicolor ","ATPase component *(Ino80) of chromatin remodelling complex","protein_coding"
"Sobic.001G376800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G392300.1","No alias","Sorghum bicolor ","RNA helicase Prp43 of Intron-Lariat Spliceosome complex","protein_coding"
"Sobic.001G395100.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G413300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G457800.2","No alias","Sorghum bicolor ","RNA helicase *(Brr2)","protein_coding"
"Sobic.001G473000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G494100.1","No alias","Sorghum bicolor ","component *(DRD1) of DNA methylation accessory complex","protein_coding"
"Sobic.001G498400.1","No alias","Sorghum bicolor ","ATP-dependent helicase *(DBP5/LOS4)","protein_coding"
"Sobic.001G527300.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G527800.1","No alias","Sorghum bicolor ","endoribonuclease component *(DCL1) of DCL1-HYL1 miRNA biogenesis complex","protein_coding"
"Sobic.001G537700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.001G543100.2","No alias","Sorghum bicolor ","chromatin remodeling factor *(ALC1)","protein_coding"
"Sobic.002G021200.1","No alias","Sorghum bicolor ","chromatin remodeling factor *(DDM1)","protein_coding"
"Sobic.002G031700.1","No alias","Sorghum bicolor ","group-II intron splicing RNA helicase *(PMH)","protein_coding"
"Sobic.002G071000.1","No alias","Sorghum bicolor ","sRNA cargo-loading helicase *(RH11/37) of extracellular vesicle trafficking","protein_coding"
"Sobic.002G112100.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G191100.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G262100.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G268100.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G308700.1","No alias","Sorghum bicolor ","CHD3-type chromatin remodeling factor *(PKL/PKR)","protein_coding"
"Sobic.002G313400.1","No alias","Sorghum bicolor ","RNA helicase *(Prp16)","protein_coding"
"Sobic.002G315100.1","No alias","Sorghum bicolor ","chromatin remodeling factor *(Rad5-like)","protein_coding"
"Sobic.002G318800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G363700.1","No alias","Sorghum bicolor ","chromatin remodeling factor *(SMARCAL1)","protein_coding"
"Sobic.002G369701.1","No alias","Sorghum bicolor ","crosslink repair helicase *(HRQ1)","protein_coding"
"Sobic.002G378900.4","No alias","Sorghum bicolor ","E3 ubiquitin ligase *(RBR-Helicase)","protein_coding"
"Sobic.002G387500.1","No alias","Sorghum bicolor ","SSU processome assembly factor *(SWA3)","protein_coding"
"Sobic.002G389800.1","No alias","Sorghum bicolor ","chromatin remodeling factor *(SMARCAL1)","protein_coding"
"Sobic.002G391600.1","No alias","Sorghum bicolor ","RNA helicase *(Brr2)","protein_coding"
"Sobic.002G394200.1","No alias","Sorghum bicolor ","chromatin remodeling factor *(Rad5)","protein_coding"
"Sobic.002G399200.1","No alias","Sorghum bicolor ","rRNA biogenesis RNA helicase *(ROK1)","protein_coding"
"Sobic.002G404700.1","No alias","Sorghum bicolor ","CHD1-type chromatin remodeling factor *(CHR5) & component *(CHR5) of SAGA transcription co-activator complex","protein_coding"
"Sobic.002G420000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.002G428700.1","No alias","Sorghum bicolor ","RDR2-polymerase accessory protein *(CLSY1/2)","protein_coding"
"Sobic.003G021600.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G027350.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G030500.1","No alias","Sorghum bicolor ","regulatory RNA helicase *(RH20/RH30) of virus replication","protein_coding"
"Sobic.003G039300.1","No alias","Sorghum bicolor ","23S-rRNA maturation helicase *(RH39)","protein_coding"
"Sobic.003G042400.1","No alias","Sorghum bicolor ","RNA helicase component *(HEN2) of Nuclear Exosome Targeting (NEXT) activation complex","protein_coding"
"Sobic.003G050700.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G058800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G095900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G107500.1","No alias","Sorghum bicolor ","DNA repair protein *(CSB/ERCC6) & chromatin remodeling factor *(ERCC6)","protein_coding"
"Sobic.003G117200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G124600.1","No alias","Sorghum bicolor ","RNA helicase *(Prp2)","protein_coding"
"Sobic.003G163200.1","No alias","Sorghum bicolor ","ATPase component *(CHR11/CHR17) of ISWI chromatin remodeling complexes","protein_coding"
"Sobic.003G186900.1","No alias","Sorghum bicolor ","helicase UAP56","protein_coding"
"Sobic.003G187400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G222600.1","No alias","Sorghum bicolor ","mRNA helicase *(RH31)","protein_coding"
"Sobic.003G222700.1","No alias","Sorghum bicolor ","mRNA helicase *(RH31)","protein_coding"
"Sobic.003G308500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G316500.1","No alias","Sorghum bicolor ","chromatin remodeling factor *(Ris1)","protein_coding"
"Sobic.003G377300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.003G396700.1","No alias","Sorghum bicolor ","endoribonuclease *(DCL3)","protein_coding"
"Sobic.003G397800.1","No alias","Sorghum bicolor ","regulatory RNA helicase *(RH20/RH30) of virus replication","protein_coding"
"Sobic.003G428000.1","No alias","Sorghum bicolor ","chromatin remodeling factor *(SHPRH)","protein_coding"
"Sobic.003G442700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G005400.1","No alias","Sorghum bicolor ","RNA helicase *(Brr2)","protein_coding"
"Sobic.004G007133.1","No alias","Sorghum bicolor ","component *(SPT16) of FACT histone chaperone complex","protein_coding"
"Sobic.004G009000.1","No alias","Sorghum bicolor ","crosslink repair helicase *(HRQ1)","protein_coding"
"Sobic.004G009600.1","No alias","Sorghum bicolor ","SMARCA component *(SYD/BRM/MINU)","protein_coding"
"Sobic.004G035300.1","No alias","Sorghum bicolor ","helicase component *(RecQ4A) of RTR Holliday junction dissolution complex","protein_coding"
"Sobic.004G039400.2","No alias","Sorghum bicolor ","mRNA unwinding factor *(eIF4A))","protein_coding"
"Sobic.004G084700.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G095000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G095100.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G163000.1","No alias","Sorghum bicolor ","chromatin remodeling factor *(Rad5)","protein_coding"
"Sobic.004G174200.1","No alias","Sorghum bicolor ","RNA helicase *(Prp2)","protein_coding"
"Sobic.004G215600.1","No alias","Sorghum bicolor ","DNA helicase *(RCK/MER3)","protein_coding"
"Sobic.004G225600.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G246000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G263600.2","No alias","Sorghum bicolor ","DNA translocase *(RecG)","protein_coding"
"Sobic.004G276400.4","No alias","Sorghum bicolor ","ATPase component *(PIE1) of SWR1 chromatin remodeling complex","protein_coding"
"Sobic.004G299200.2","No alias","Sorghum bicolor ","regulatory protein *(CLSY3/4) of transacting siRNA pathway","protein_coding"
"Sobic.004G307900.1","No alias","Sorghum bicolor ","chromatin remodeling factor *(RAD54)","protein_coding"
"Sobic.004G319400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G330000.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G352600.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.004G356900.1","No alias","Sorghum bicolor ","helicase component *(eIF4A3) of RNA quality control Exon Junction complex","protein_coding"
"Sobic.005G061900.1","No alias","Sorghum bicolor ","DNA translocase component *(FANCM) of FANCM-MHF DNA remodeling complex","protein_coding"
"Sobic.005G138600.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.005G175100.1","No alias","Sorghum bicolor ","sRNA cargo-loading helicase *(RH11/37) of extracellular vesicle trafficking","protein_coding"
"Sobic.005G191200.1","No alias","Sorghum bicolor ","RNA helicase *(SMA1)","protein_coding"
"Sobic.005G210500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.005G220000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G029300.1","No alias","Sorghum bicolor ","chromatin remodeling factor *(Rad5)","protein_coding"
"Sobic.006G045200.2","No alias","Sorghum bicolor ","DNA translocase *(RecG)","protein_coding"
"Sobic.006G083300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G106300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G126800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G142775.1","No alias","Sorghum bicolor ","endoribonuclease (DCL4) of transacting siRNA pathway & component *(DRB7) of DRB4-DRB7.1 siRNA biogenesis regulator complex","protein_coding"
"Sobic.006G143200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.006G180700.1","No alias","Sorghum bicolor ","ATPase component *(Etl1)","protein_coding"
"Sobic.006G225700.1","No alias","Sorghum bicolor ","chromatin remodeling factor *(Rad5) & chromatin remodeling factor *(Ris1)","protein_coding"
"Sobic.006G225900.2","No alias","Sorghum bicolor ","chromatin remodeling factor *(Rad5) & chromatin remodeling factor *(Ris1)","protein_coding"
"Sobic.006G281400.1","No alias","Sorghum bicolor ","chromatin remodeling factor *(ERCC6)","protein_coding"
"Sobic.007G023800.2","No alias","Sorghum bicolor ","RNA helicase *(RCF1)","protein_coding"
"Sobic.007G034200.1","No alias","Sorghum bicolor ","component *(DRD1) of DNA methylation accessory complex","protein_coding"
"Sobic.007G050400.1","No alias","Sorghum bicolor ","RNA helicase *(RCF1)","protein_coding"
"Sobic.007G063000.2","No alias","Sorghum bicolor ","chromatin remodeling factor *(Rad5) & chromatin remodeling factor *(Ris1)","protein_coding"
"Sobic.007G126500.2","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.007G155700.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.007G196400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.008G041300.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.008G091300.1","No alias","Sorghum bicolor ","DNA polymerase theta *(TEB)","protein_coding"
"Sobic.008G165900.1","No alias","Sorghum bicolor ","group-II intron splicing RNA helicase *(PMH)","protein_coding"
"Sobic.009G040600.1","No alias","Sorghum bicolor ","SMARCA component *(SYD/BRM/MINU)","protein_coding"
"Sobic.009G045400.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G125100.1","No alias","Sorghum bicolor ","RNA helicase *(Prp2)","protein_coding"
"Sobic.009G126700.2","No alias","Sorghum bicolor ","regulatory protein *(CLSY3/4) of transacting siRNA pathway","protein_coding"
"Sobic.009G143800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.009G254100.1","No alias","Sorghum bicolor ","RNA helicase *(Prp22)","protein_coding"
"Sobic.009G256400.1","No alias","Sorghum bicolor ","chromatin remodeling factor *(Mot1) & TATA box-binding protein-associated factor *(MOT1)","protein_coding"
"Sobic.009G257600.1","No alias","Sorghum bicolor ","helicase UAP56","protein_coding"
"Sobic.010G003400.1","No alias","Sorghum bicolor ","RNA helicase component *(MTR4) of TRAMP nucleolar regulation complex","protein_coding"
"Sobic.010G059500.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Sobic.010G065300.1","No alias","Sorghum bicolor ","CHD3-type chromatin remodeling factor *(PKL/PKR)","protein_coding"
"Sobic.010G105200.1","No alias","Sorghum bicolor ","SMARCA component *(SYD/BRM/MINU)","protein_coding"
"Sobic.010G153300.2","No alias","Sorghum bicolor ","mRNA helicase *(RH31)","protein_coding"
"Sobic.010G160500.1","No alias","Sorghum bicolor ","regulatory RNA helicase *(RH27/RH51) of miRNA biogenesis pathway","protein_coding"
"Sobic.010G183800.2","No alias","Sorghum bicolor ","sRNA cargo-loading helicase *(RH11/37) of extracellular vesicle trafficking","protein_coding"
"Sobic.010G251100.1","No alias","Sorghum bicolor ","mRNA unwinding factor *(eIF4A))","protein_coding"
"Solyc01g005960","No alias","Solanum lycopersicum","RNA helicase DEAD1","protein_coding"
"Solyc01g006340","No alias","Solanum lycopersicum","Dead box ATP-dependent RNA helicase, putative (AHRD V3.3 *** B9RGT5_RICCO)","protein_coding"
"Solyc01g006710","No alias","Solanum lycopersicum","ATP-dependent RNA helicase, putative (AHRD V3.3 *** B9RL32_RICCO)","protein_coding"
"Solyc01g006970","No alias","Solanum lycopersicum","RNA helicase family protein (AHRD V3.3 *** AT2G35920.2)","protein_coding"
"Solyc01g057760","No alias","Solanum lycopersicum","RNA helicase DEAD2","protein_coding"
"Solyc01g060460","No alias","Solanum lycopersicum","chromatin remodeling 31 (AHRD V3.3 *** AT1G05490.1)","protein_coding"
"Solyc01g067390","No alias","Solanum lycopersicum","RNA helicase DEAH-box1","protein_coding"
"Solyc01g068280","No alias","Solanum lycopersicum","chromatin remodeling 24 (AHRD V3.3 *** AT5G63950.1)","protein_coding"
"Solyc01g068300","No alias","Solanum lycopersicum","Chromatin remodeling 31, putative (AHRD V3.3 *-* A0A061FRH7_THECC)","protein_coding"
"Solyc01g068320","No alias","Solanum lycopersicum","chromatin remodeling 31 (AHRD V3.3 *** AT1G05490.1)","protein_coding"
"Solyc01g079250","No alias","Solanum lycopersicum","RNA helicase DEAH-box2","protein_coding"
"Solyc01g079330","No alias","Solanum lycopersicum","RNA helicase DEAD3","protein_coding"
"Solyc01g079690","No alias","Solanum lycopersicum","SWI/SNF2-type chromatin remodelling ATPase","protein_coding"
"Solyc01g079800","No alias","Solanum lycopersicum","Dead box ATP-dependent RNA helicase, putative (AHRD V3.3 *** B9RTX6_RICCO)","protein_coding"
"Solyc01g094350","No alias","Solanum lycopersicum","RNA helicase DEAD4","protein_coding"
"Solyc01g094800","No alias","Solanum lycopersicum","ATP-dependent helicase BRM (AHRD V3.3 *** W9QEL4_9ROSA)","protein_coding"
"Solyc01g095710","No alias","Solanum lycopersicum","RNA helicase DEAH-box3","protein_coding"
"Solyc01g095740","No alias","Solanum lycopersicum","RNA helicase DEAD5","protein_coding"
"Solyc01g099460","No alias","Solanum lycopersicum","RecQ family ATP-dependent DNA helicase (AHRD V3.3 *** G7I8P0_MEDTR)","protein_coding"
"Solyc01g100280","No alias","Solanum lycopersicum","RNA helicase DEAH-box4","protein_coding"
"Solyc01g103080","No alias","Solanum lycopersicum","ATP-dependent RNA helicase family protein (AHRD V3.3 *** B9N0I2_POPTR)","protein_coding"
"Solyc01g103690","No alias","Solanum lycopersicum","ATP-dependent RNA helicase (AHRD V3.3 *-* A0A072V3N4_MEDTR)","protein_coding"
"Solyc01g103960","No alias","Solanum lycopersicum","RNA helicase DEAH-box15","protein_coding"
"Solyc01g109970","No alias","Solanum lycopersicum","SNF2 domain-containing protein / helicase domain-containing protein (AHRD V3.3 *** AT2G16390.2)","protein_coding"
"Solyc01g110990","No alias","Solanum lycopersicum","RNA helicase DEAH-box6","protein_coding"
"Solyc02g014770","No alias","Solanum lycopersicum","RNA helicase DEAH-box7","protein_coding"
"Solyc02g033050","No alias","Solanum lycopersicum","LOW QUALITY:chromatin remodeling 31 (AHRD V3.3 *-* AT1G05490.1)","protein_coding"
"Solyc02g062780","No alias","Solanum lycopersicum","chromatin remodeling 1 (AHRD V3.3 *** AT5G66750.1)","protein_coding"
"Solyc02g068190","No alias","Solanum lycopersicum","RNA helicase DEAD6","protein_coding"
"Solyc02g068560","No alias","Solanum lycopersicum","CHD3-type chromatin-remodeling factor PICKLE (AHRD V3.3 *** A0A142CD29_9LAMI)","protein_coding"
"Solyc02g070100","No alias","Solanum lycopersicum","RNA helicase DEAD7","protein_coding"
"Solyc02g081290","No alias","Solanum lycopersicum","RNA helicase DEAD9","protein_coding"
"Solyc02g085390","No alias","Solanum lycopersicum","chromatin remodeling 1 (AHRD V3.3 *** AT5G66750.1)","protein_coding"
"Solyc02g086660","No alias","Solanum lycopersicum","RNA helicase DEAD10","protein_coding"
"Solyc02g090750","No alias","Solanum lycopersicum","Eukaryotic initiation factor 4A (ATP-dependent RNA helicase eIF4A) (AHRD V3.3 *-* E1ZM95_CHLVA)","protein_coding"
"Solyc02g094590","No alias","Solanum lycopersicum","Dead box ATP-dependent RNA helicase, putative (AHRD V3.3 *** B9RGU4_RICCO)","protein_coding"
"Solyc03g005460","No alias","Solanum lycopersicum","Helicase protein with RING/U-box domain-containing protein (AHRD V3.3 *** AT5G43530.1)","protein_coding"
"Solyc03g006570","No alias","Solanum lycopersicum","SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein (AHRD V3.3 *** AT1G61140.3)","protein_coding"
"Solyc03g007010","No alias","Solanum lycopersicum","Dead box ATP-dependent RNA helicase, putative (AHRD V3.3 *** B9R9L5_RICCO)","protein_coding"
"Solyc03g052980","No alias","Solanum lycopersicum","RNA helicase DEAD11","protein_coding"
"Solyc03g063220","No alias","Solanum lycopersicum","RNA helicase DEAH-box8","protein_coding"
"Solyc03g095690","No alias","Solanum lycopersicum","SNF2 domain protein/helicase domain protein (AHRD V3.3 *-* G7KD91_MEDTR)","protein_coding"
"Solyc03g114370","No alias","Solanum lycopersicum","RNA helicase DEAD13","protein_coding"
"Solyc03g114780","No alias","Solanum lycopersicum","RNA helicase DEAH-box9","protein_coding"
"Solyc03g115390","No alias","Solanum lycopersicum","RNA helicase DEAH-box10","protein_coding"
"Solyc03g115530","No alias","Solanum lycopersicum","SNF2 domain-containing protein (AHRD V3.3 *** D7M0M5_ARALL)","protein_coding"
"Solyc03g117440","No alias","Solanum lycopersicum","RNA helicase DEAD14","protein_coding"
"Solyc03g118920","No alias","Solanum lycopersicum","ATP-dependent RNA helicase, putative (AHRD V3.3 *** B9S355_RICCO)","protein_coding"
"Solyc04g007510","No alias","Solanum lycopersicum","ATP-dependent RNA helicase, putative (AHRD V3.3 *** B9SJY8_RICCO)","protein_coding"
"Solyc04g014210","No alias","Solanum lycopersicum","RNA helicase DEAH-box12","protein_coding"
"Solyc04g016370","No alias","Solanum lycopersicum","DNA helicase INO80-like protein (AHRD V3.3 *** AT3G57300.4)","protein_coding"
"Solyc04g050150","No alias","Solanum lycopersicum","RNA helicase DEAH-box13","protein_coding"
"Solyc04g054440","No alias","Solanum lycopersicum","LOW QUALITY:chromatin remodeling 31 (AHRD V3.3 *-* AT1G05490.1)","protein_coding"
"Solyc04g056410","No alias","Solanum lycopersicum","DNA repair/recombination protein (AHRD V3.3 *** AT3G19210.1)","protein_coding"
"Solyc04g081580","No alias","Solanum lycopersicum","RNA helicase DEAD15","protein_coding"
"Solyc04g082790","No alias","Solanum lycopersicum","RNA helicase DEAD16","protein_coding"
"Solyc05g006130","No alias","Solanum lycopersicum","RNA helicase DEAD17","protein_coding"
"Solyc05g008040","No alias","Solanum lycopersicum","ATP-dependent DNA helicase family protein (AHRD V3.3 *** B9HW67_POPTR)","protein_coding"
"Solyc05g014690","No alias","Solanum lycopersicum","RNA helicase DEAH-box14","protein_coding"
"Solyc05g044480","No alias","Solanum lycopersicum","RNA helicase DEAH-box16","protein_coding"
"Solyc05g044510","No alias","Solanum lycopersicum","RNA helicase DEAH-box17","protein_coding"
"Solyc05g047520","No alias","Solanum lycopersicum","ATP-dependent RNA helicase DOB1 (AHRD V3.3 *** A0A0K9PZL4_ZOSMR)","protein_coding"
"Solyc05g048850","No alias","Solanum lycopersicum","RNA helicase DEAD18","protein_coding"
"Solyc06g005990","No alias","Solanum lycopersicum","Helicase, putative (AHRD V3.3 *** B9S370_RICCO)","protein_coding"
"Solyc06g009070","No alias","Solanum lycopersicum","Zinc finger transcription factor 41","protein_coding"
"Solyc06g010200","No alias","Solanum lycopersicum","Chromatin remodeling complex subunit, putative isoform 2 (AHRD V3.3 *-* A0A061GY85_THECC)","protein_coding"
"Solyc06g048960","No alias","Solanum lycopersicum","Dicer-like 2a","protein_coding"
"Solyc06g050510","No alias","Solanum lycopersicum","DNA repair rhp54 (AHRD V3.3 *** A0A0B0NS67_GOSAR)","protein_coding"
"Solyc06g054560","No alias","Solanum lycopersicum","RNA helicase DEAH-box19","protein_coding"
"Solyc06g062800","No alias","Solanum lycopersicum","RNA helicase DEAD19","protein_coding"
"Solyc06g065730","No alias","Solanum lycopersicum","chromatin remodeling factor CHD3 (PICKLE) (AHRD V3.3 *** AT2G25170.4)","protein_coding"
"Solyc06g066060","No alias","Solanum lycopersicum","CGI-144","protein_coding"
"Solyc06g068280","No alias","Solanum lycopersicum","RNA helicase DEAD20","protein_coding"
"Solyc06g069480","No alias","Solanum lycopersicum","U5 small nuclear ribonucleoprotein helicase (AHRD V3.3 *** AT5G61140.2)","protein_coding"
"Solyc06g071620","No alias","Solanum lycopersicum","U5 small nuclear ribonucleoprotein helicase (AHRD V3.3 *** AT1G20960.2)","protein_coding"
"Solyc06g082100","No alias","Solanum lycopersicum","U5 small nuclear ribonucleoprotein helicase (AHRD V3.3 *** AT1G20960.2)","protein_coding"
"Solyc07g005030","No alias","Solanum lycopersicum","Dicer-like 4","protein_coding"
"Solyc07g005890","No alias","Solanum lycopersicum","Dead box ATP-dependent RNA helicase, putative (AHRD V3.3 *** B9T3L1_RICCO)","protein_coding"
"Solyc07g039550","No alias","Solanum lycopersicum","RNA helicase DEAH-box21","protein_coding"
"Solyc07g040750","No alias","Solanum lycopersicum","RNA helicase DEAD21","protein_coding"
"Solyc07g042270","No alias","Solanum lycopersicum","RNA helicase DEAD22","protein_coding"
"Solyc07g042660","No alias","Solanum lycopersicum","SNF2 domain-containing protein (AHRD V3.3 *-* D7KEB6_ARALL)","protein_coding"
"Solyc07g044760","No alias","Solanum lycopersicum","RNA helicase DEAD23","protein_coding"
"Solyc07g044930","No alias","Solanum lycopersicum","ATP-dependent RNA helicase, putative (AHRD V3.3 *** B9S326_RICCO)","protein_coding"
"Solyc07g051960","No alias","Solanum lycopersicum","SNF2 domain-containing protein (AHRD V3.3 *** D7KEB6_ARALL)","protein_coding"
"Solyc07g051970","No alias","Solanum lycopersicum","Helicase protein with RING/U-box domain-containing protein (AHRD V3.3 *** AT1G05120.1)","protein_coding"
"Solyc07g051980","No alias","Solanum lycopersicum","SNF2 domain-containing protein (AHRD V3.3 *** D7KEB6_ARALL)","protein_coding"
"Solyc07g052100","No alias","Solanum lycopersicum","SNF2 domain-containing protein (AHRD V3.3 *** D7KEB6_ARALL)","protein_coding"
"Solyc07g053870","No alias","Solanum lycopersicum","Helicase family protein (AHRD V3.3 *** U5FHT2_POPTR)","protein_coding"
"Solyc07g064520","No alias","Solanum lycopersicum","RNA helicase DEAD24","protein_coding"
"Solyc08g029130","No alias","Solanum lycopersicum","chromatin remodeling factor CHD3 (PICKLE) (AHRD V3.3 *** AT2G25170.4)","protein_coding"
"Solyc08g042050","No alias","Solanum lycopersicum","RNA helicase DEAD25","protein_coding"
"Solyc08g061000","No alias","Solanum lycopersicum","Dead box ATP-dependent RNA helicase, putative (AHRD V3.3 *** B9RV50_RICCO)","protein_coding"
"Solyc08g061410","No alias","Solanum lycopersicum","LOW QUALITY:Chromatin remodeling 31, putative (AHRD V3.3 *-* A0A061FRH7_THECC)","protein_coding"
"Solyc08g062000","No alias","Solanum lycopersicum","LOW QUALITY:chromatin remodeling 31 (AHRD V3.3 *-* AT1G05490.1)","protein_coding"
"Solyc08g062800","No alias","Solanum lycopersicum","RNA helicase DEAD26","protein_coding"
"Solyc08g067210","No alias","Solanum lycopersicum","Dicer-like 3","protein_coding"
"Solyc08g068120","No alias","Solanum lycopersicum","DNA polymerase theta (AHRD V3.3 *** A0A0B2Q221_GLYSO)","protein_coding"
"Solyc08g074500","No alias","Solanum lycopersicum","TATA-binding protein associated factor-like protein (AHRD V3.3 *** A0A072UIT4_MEDTR)","protein_coding"
"Solyc08g074600","No alias","Solanum lycopersicum","ATP-dependent DNA helicase RecQ family protein (AHRD V3.3 *** G7K6R5_MEDTR)","protein_coding"
"Solyc08g076200","No alias","Solanum lycopersicum","RNA helicase DEAD27","protein_coding"
"Solyc08g077580","No alias","Solanum lycopersicum","LOW QUALITY:chromatin remodeling 31 (AHRD V3.3 *-* AT1G05490.1)","protein_coding"
"Solyc08g077610","No alias","Solanum lycopersicum","chromatin remodeling 31 (AHRD V3.3 *-* AT1G05490.1)","protein_coding"
"Solyc08g077650","No alias","Solanum lycopersicum","chromatin remodeling 31 (AHRD V3.3 *-* AT1G05490.1)","protein_coding"
"Solyc08g077690","No alias","Solanum lycopersicum","Chromatin remodeling 31, putative (AHRD V3.3 *** A0A061FRH7_THECC)","protein_coding"
"Solyc08g080550","No alias","Solanum lycopersicum","Dead box ATP-dependent RNA helicase, putative (AHRD V3.3 *** B9RC60_RICCO)","protein_coding"
"Solyc09g007440","No alias","Solanum lycopersicum","Dead box ATP-dependent RNA helicase, putative (AHRD V3.3 *** B9S4I3_RICCO)","protein_coding"
"Solyc09g008120","No alias","Solanum lycopersicum","ATP-dependent RNA helicase, putative (AHRD V3.3 *** B9REC8_RICCO)","protein_coding"
"Solyc09g015930","No alias","Solanum lycopersicum","RNA helicase DEAD28","protein_coding"
"Solyc09g066500","No alias","Solanum lycopersicum","chromatin remodeling 8 (AHRD V3.3 *** AT2G18760.7)","protein_coding"
"Solyc09g082380","No alias","Solanum lycopersicum","ATP-dependent RNA helicase (AHRD V3.3 *** AT4G14790.2)","protein_coding"
"Solyc09g090740","No alias","Solanum lycopersicum","RNA helicase DEAD29","protein_coding"
"Solyc09g097820","No alias","Solanum lycopersicum","RNA helicase family protein","protein_coding"
"Solyc10g005130","No alias","Solanum lycopersicum","Dicer-like 1","protein_coding"
"Solyc10g005520","No alias","Solanum lycopersicum","RNA helicase DEAD30","protein_coding"
"Solyc10g007550","No alias","Solanum lycopersicum","RNA helicase DEAD31","protein_coding"
"Solyc10g009070","No alias","Solanum lycopersicum","RNA helicase DEAD32","protein_coding"
"Solyc10g017530","No alias","Solanum lycopersicum","RNA helicase DEAD33","protein_coding"
"Solyc10g049750","No alias","Solanum lycopersicum","Helicase protein with RING/U-box domain-containing protein (AHRD V3.3 *** AT1G05120.1)","protein_coding"
"Solyc10g076910","No alias","Solanum lycopersicum","ATP-dependent RNA helicase, putative (AHRD V3.3 *** B9SMB4_RICCO)","protein_coding"
"Solyc10g085790","No alias","Solanum lycopersicum","RNA helicase DEAD34","protein_coding"
"Solyc11g005250","No alias","Solanum lycopersicum","SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein (AHRD V3.3 *** AT3G54460.1)","protein_coding"
"Solyc11g008520","No alias","Solanum lycopersicum","Dicer-like 2c","protein_coding"
"Solyc11g008530","No alias","Solanum lycopersicum","Dicer-like 2d","protein_coding"
"Solyc11g008540","No alias","Solanum lycopersicum","Dicer-like 2b","protein_coding"
"Solyc11g010310","No alias","Solanum lycopersicum","ATP-dependent RNA helicase, putative (AHRD V3.3 *** B9S9D0_RICCO)","protein_coding"
"Solyc11g011460","No alias","Solanum lycopersicum","ATP-dependent RNA helicase (AHRD V3.3 *** AT5G39840.1)","protein_coding"
"Solyc11g020770","No alias","Solanum lycopersicum","DEAD/DEAH box RNA helicase family protein (AHRD V3.3 *** AT1G35530.4)","protein_coding"
"Solyc11g033280","No alias","Solanum lycopersicum","Dead box ATP-dependent RNA helicase, putative (AHRD V3.3 *** B9S4I6_RICCO)","protein_coding"
"Solyc11g045180","No alias","Solanum lycopersicum","DEAD-box ATP-dependent RNA helicase (AHRD V3.3 *** A0A068BG41_COCNU)","protein_coding"
"Solyc11g062010","No alias","Solanum lycopersicum","Chromatin structure-remodeling complex subunit snf21 (AHRD V3.3 *-* A0A0B2P221_GLYSO)","protein_coding"
"Solyc11g066790","No alias","Solanum lycopersicum","Helicase protein with RING/U-box domain-containing protein (AHRD V3.3 *** AT5G43530.1)","protein_coding"
"Solyc12g006320","No alias","Solanum lycopersicum","RNA helicase DEAD35","protein_coding"
"Solyc12g017700","No alias","Solanum lycopersicum","ATP-dependent RNA helicase (AHRD V3.3 *** A0A0K9PGQ5_ZOSMR)","protein_coding"
"Solyc12g017860","No alias","Solanum lycopersicum","ATP-dependent RNA helicase DOB1 (AHRD V3.3 *** A0A0K9PZL4_ZOSMR)","protein_coding"
"Solyc12g020110","No alias","Solanum lycopersicum","SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein (AHRD V3.3 *** AT1G11100.1)","protein_coding"
"Solyc12g035130","No alias","Solanum lycopersicum","RNA helicase DEAD36","protein_coding"
"Solyc12g044860","No alias","Solanum lycopersicum","ethylene-responsive RNA helicase","protein_coding"
"Solyc12g056340","No alias","Solanum lycopersicum","RNA helicase DEAD38","protein_coding"
"Solyc12g056740","No alias","Solanum lycopersicum","RNA helicase DEAD39","protein_coding"
"Solyc12g089010","No alias","Solanum lycopersicum","ATP-dependent RNA helicase, putative (AHRD V3.3 *** B9SMB4_RICCO)","protein_coding"
"Solyc12g095990","No alias","Solanum lycopersicum","RNA helicase DEAD40","protein_coding"
"Solyc12g096000","No alias","Solanum lycopersicum","RNA helicase DEAD41","protein_coding"
"Solyc12g098700","No alias","Solanum lycopersicum","RNA helicase DEAD42","protein_coding"
"Solyc12g098860","No alias","Solanum lycopersicum","chromatin remodeling factor18 (AHRD V3.3 *** AT1G48310.1)","protein_coding"
"Solyc12g099910","No alias","Solanum lycopersicum","chromatin remodeling 5 (AHRD V3.3 *** AT2G13370.3)","protein_coding"
"Sopen01g001970","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen01g002340","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen01g002700","No alias","Solanum pennellii","Helicase associated domain (HA2)","protein_coding"
"Sopen01g002960","No alias","Solanum pennellii","Helicase associated domain (HA2)","protein_coding"
"Sopen01g012810","No alias","Solanum pennellii","Reverse transcriptase (RNA-dependent DNA polymerase)","protein_coding"
"Sopen01g021130","No alias","Solanum pennellii","Helicase conserved C-terminal domain","protein_coding"
"Sopen01g023010","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen01g026600","No alias","Solanum pennellii","SNF2 family N-terminal domain","protein_coding"
"Sopen01g029280","No alias","Solanum pennellii","SNF2 family N-terminal domain","protein_coding"
"Sopen01g030220","No alias","Solanum pennellii","SNF2 family N-terminal domain","protein_coding"
"Sopen01g030250","No alias","Solanum pennellii","SNF2 family N-terminal domain","protein_coding"
"Sopen01g030290","No alias","Solanum pennellii","SNF2 family N-terminal domain","protein_coding"
"Sopen01g031030","No alias","Solanum pennellii","Oligonucleotide/oligosaccharide-binding (OB)-fold","protein_coding"
"Sopen01g031110","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen01g031470","No alias","Solanum pennellii","SNF2 family N-terminal domain","protein_coding"
"Sopen01g031560","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen01g038140","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen01g038570","No alias","Solanum pennellii","SNF2 family N-terminal domain","protein_coding"
"Sopen01g039450","No alias","Solanum pennellii","Helicase associated domain (HA2)","protein_coding"
"Sopen01g039490","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen01g043000","No alias","Solanum pennellii","Helicase conserved C-terminal domain","protein_coding"
"Sopen01g043800","No alias","Solanum pennellii","Helicase conserved C-terminal domain","protein_coding"
"Sopen01g046100","No alias","Solanum pennellii","Helicase associated domain (HA2)","protein_coding"
"Sopen01g046350","No alias","Solanum pennellii","Helicase conserved C-terminal domain","protein_coding"
"Sopen01g052160","No alias","Solanum pennellii","SNF2 family N-terminal domain","protein_coding"
"Sopen01g053030","No alias","Solanum pennellii","Oligonucleotide/oligosaccharide-binding (OB)-fold","protein_coding"
"Sopen02g008610","No alias","Solanum pennellii","SNF2 family N-terminal domain","protein_coding"
"Sopen02g013810","No alias","Solanum pennellii","SNF2 family N-terminal domain","protein_coding"
"Sopen02g017290","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen02g017710","No alias","Solanum pennellii","SNF2 family N-terminal domain","protein_coding"
"Sopen02g019260","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen02g023690","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen02g025920","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen02g030080","No alias","Solanum pennellii","SNF2 family N-terminal domain","protein_coding"
"Sopen02g031330","No alias","Solanum pennellii","Sec63 Brl domain","protein_coding"
"Sopen02g031410","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen02g035380","No alias","Solanum pennellii","hypothetical protein","protein_coding"
"Sopen02g039240","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen03g001490","No alias","Solanum pennellii","SNF2 family N-terminal domain","protein_coding"
"Sopen03g002560","No alias","Solanum pennellii","SNF2 family N-terminal domain","protein_coding"
"Sopen03g003010","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen03g011440","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen03g015780","No alias","Solanum pennellii","SNF2 family N-terminal domain","protein_coding"
"Sopen03g025610","No alias","Solanum pennellii","SNF2 family N-terminal domain","protein_coding"
"Sopen03g031450","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen03g033470","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen03g033860","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen03g034400","No alias","Solanum pennellii","Oligonucleotide/oligosaccharide-binding (OB)-fold","protein_coding"
"Sopen03g034520","No alias","Solanum pennellii","SNF2 family N-terminal domain","protein_coding"
"Sopen03g036330","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen03g037860","No alias","Solanum pennellii","Helicase associated domain (HA2)","protein_coding"
"Sopen04g002590","No alias","Solanum pennellii","Helicase associated domain (HA2)","protein_coding"
"Sopen04g006310","No alias","Solanum pennellii","Helicase conserved C-terminal domain","protein_coding"
"Sopen04g008460","No alias","Solanum pennellii","SNF2 family N-terminal domain","protein_coding"
"Sopen04g020860","No alias","Solanum pennellii","SNF2 family N-terminal domain","protein_coding"
"Sopen04g024270","No alias","Solanum pennellii","SNF2 family N-terminal domain","protein_coding"
"Sopen04g025310","No alias","Solanum pennellii","SNF2 family N-terminal domain","protein_coding"
"Sopen04g035190","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen04g036430","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen05g002150","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen05g003880","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen05g009850","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen05g010270","No alias","Solanum pennellii","Oligonucleotide/oligosaccharide-binding (OB)-fold","protein_coding"
"Sopen05g026810","No alias","Solanum pennellii","SNF2 family N-terminal domain","protein_coding"
"Sopen05g026850","No alias","Solanum pennellii","SNF2 family N-terminal domain","protein_coding"
"Sopen05g027830","No alias","Solanum pennellii","rRNA-processing arch domain","protein_coding"
"Sopen06g003870","No alias","Solanum pennellii","Helicase conserved C-terminal domain","protein_coding"
"Sopen06g011210","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen06g015790","No alias","Solanum pennellii","Transposase-associated domain","protein_coding"
"Sopen06g016030","No alias","Solanum pennellii","SNF2 family N-terminal domain","protein_coding"
"Sopen06g019630","No alias","Solanum pennellii","SNF2 family N-terminal domain","protein_coding"
"Sopen06g022260","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen06g024260","No alias","Solanum pennellii","SNF2 family N-terminal domain","protein_coding"
"Sopen06g024540","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen06g025550","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen06g026770","No alias","Solanum pennellii","Sec63 Brl domain","protein_coding"
"Sopen06g033490","No alias","Solanum pennellii","Sec63 Brl domain","protein_coding"
"Sopen07g001140","No alias","Solanum pennellii","Ribonuclease III domain","protein_coding"
"Sopen07g002020","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen07g010680","No alias","Solanum pennellii","Helicase conserved C-terminal domain","protein_coding"
"Sopen07g019130","No alias","Solanum pennellii","Oligonucleotide/oligosaccharide-binding (OB)-fold","protein_coding"
"Sopen07g019510","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen07g020930","No alias","Solanum pennellii","SNF2 family N-terminal domain","protein_coding"
"Sopen07g021600","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen07g021900","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen07g023350","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen07g023470","No alias","Solanum pennellii","Helicase associated domain (HA2)","protein_coding"
"Sopen07g025550","No alias","Solanum pennellii","SNF2 family N-terminal domain","protein_coding"
"Sopen07g025580","No alias","Solanum pennellii","SNF2 family N-terminal domain","protein_coding"
"Sopen07g025630","No alias","Solanum pennellii","Helicase conserved C-terminal domain","protein_coding"
"Sopen07g025730","No alias","Solanum pennellii","SNF2 family N-terminal domain","protein_coding"
"Sopen07g027840","No alias","Solanum pennellii","SNF2 family N-terminal domain","protein_coding"
"Sopen07g032720","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen08g010020","No alias","Solanum pennellii","SNF2 family N-terminal domain","protein_coding"
"Sopen08g012480","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen08g016260","No alias","Solanum pennellii","Helicase conserved C-terminal domain","protein_coding"
"Sopen08g016780","No alias","Solanum pennellii","Helicase conserved C-terminal domain","protein_coding"
"Sopen08g017580","No alias","Solanum pennellii","SNF2 family N-terminal domain","protein_coding"
"Sopen08g018310","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen08g021150","No alias","Solanum pennellii","Ribonuclease III domain","protein_coding"
"Sopen08g021990","No alias","Solanum pennellii","DNA polymerase family A","protein_coding"
"Sopen08g023150","No alias","Solanum pennellii","Domain of unknown function (DUF3535)","protein_coding"
"Sopen08g024840","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen08g026150","No alias","Solanum pennellii","SNF2 family N-terminal domain","protein_coding"
"Sopen08g026200","No alias","Solanum pennellii","SNF2 family N-terminal domain","protein_coding"
"Sopen08g028870","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen09g002320","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen09g002920","No alias","Solanum pennellii","Helicase associated domain (HA2)","protein_coding"
"Sopen09g005800","No alias","Solanum pennellii","Helicase associated domain (HA2)","protein_coding"
"Sopen09g010040","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen09g012230","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen09g021600","No alias","Solanum pennellii","Helicase conserved C-terminal domain","protein_coding"
"Sopen09g024560","No alias","Solanum pennellii","Transposase family tnp2","protein_coding"
"Sopen09g028210","No alias","Solanum pennellii","SNF2 family N-terminal domain","protein_coding"
"Sopen09g031260","No alias","Solanum pennellii","Mitochondrial degradasome RNA helicase subunit C terminal","protein_coding"
"Sopen09g033680","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen09g035760","No alias","Solanum pennellii","Oligonucleotide/oligosaccharide-binding (OB)-fold","protein_coding"
"Sopen10g001150","No alias","Solanum pennellii","Ribonuclease III domain","protein_coding"
"Sopen10g001500","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen10g003480","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen10g004850","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen10g006340","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen10g020740","No alias","Solanum pennellii","SNF2 family N-terminal domain","protein_coding"
"Sopen10g028600","No alias","Solanum pennellii","Helicase associated domain (HA2)","protein_coding"
"Sopen10g035180","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen11g001260","No alias","Solanum pennellii","SNF2 family N-terminal domain","protein_coding"
"Sopen11g004310","No alias","Solanum pennellii","Ribonuclease III domain","protein_coding"
"Sopen11g004320","No alias","Solanum pennellii","Ribonuclease III domain","protein_coding"
"Sopen11g004330","No alias","Solanum pennellii","Ribonuclease III domain","protein_coding"
"Sopen11g005090","No alias","Solanum pennellii","Helicase associated domain (HA2)","protein_coding"
"Sopen11g006250","No alias","Solanum pennellii","Helicase conserved C-terminal domain","protein_coding"
"Sopen11g010870","No alias","Solanum pennellii","Helicase conserved C-terminal domain","protein_coding"
"Sopen11g015760","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen11g017590","No alias","Solanum pennellii","Helicase conserved C-terminal domain","protein_coding"
"Sopen11g020630","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen11g023970","No alias","Solanum pennellii","SNF2 family N-terminal domain","protein_coding"
"Sopen11g026510","No alias","Solanum pennellii","SNF2 family N-terminal domain","protein_coding"
"Sopen12g002280","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen12g008490","No alias","Solanum pennellii","Helicase associated domain (HA2)","protein_coding"
"Sopen12g008680","No alias","Solanum pennellii","rRNA-processing arch domain","protein_coding"
"Sopen12g011610","No alias","Solanum pennellii","SNF2 family N-terminal domain","protein_coding"
"Sopen12g013640","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen12g023220","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen12g028910","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen12g029410","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen12g030910","No alias","Solanum pennellii","Helicase associated domain (HA2)","protein_coding"
"Sopen12g031880","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen12g031890","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen12g033450","No alias","Solanum pennellii","DEAD/DEAH box helicase","protein_coding"
"Sopen12g033610","No alias","Solanum pennellii","SNF2 family N-terminal domain","protein_coding"
"Sopen12g034530","No alias","Solanum pennellii","SNF2 family N-terminal domain","protein_coding"