"sequence_id","alias","species","description","type" "109372","No alias","Selaginella moellendorffii ","Zinc finger (C3HC4-type RING finger) family protein","protein_coding" "110501","No alias","Selaginella moellendorffii ","zinc finger (CCCH-type/C3HC4-type RING finger) family protein","protein_coding" "141959","No alias","Selaginella moellendorffii ","NDR1/HIN1-like 8","protein_coding" "270336","No alias","Selaginella moellendorffii ","RING/U-box superfamily protein","protein_coding" "402666","No alias","Selaginella moellendorffii ","RING/U-box protein with domain of unknown function (DUF 1232)","protein_coding" "404507","No alias","Selaginella moellendorffii ","zinc ion binding;DNA binding;helicases;ATP binding;nucleic acid binding","protein_coding" "404573","No alias","Selaginella moellendorffii ","RING/U-box superfamily protein","protein_coding" "414152","No alias","Selaginella moellendorffii ","DNA/RNA helicase protein","protein_coding" "429540","No alias","Selaginella moellendorffii ","SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related","protein_coding" "429595","No alias","Selaginella moellendorffii ","SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related","protein_coding" "430936","No alias","Selaginella moellendorffii ","DNA/RNA helicase protein","protein_coding" "442720","No alias","Selaginella moellendorffii ","RING/U-box superfamily protein","protein_coding" "448887","No alias","Selaginella moellendorffii ","DNA/RNA helicase protein","protein_coding" "48392","No alias","Selaginella moellendorffii ","zinc finger (C3HC4-type RING finger) family protein","protein_coding" "51852","No alias","Selaginella moellendorffii ","Zinc finger (C3HC4-type RING finger) family protein","protein_coding" "A4A49_02918","No alias","Nicotiana attenuata","e3 ubiquitin-protein ligase rma1h1","protein_coding" "A4A49_02919","No alias","Nicotiana attenuata","e3 ubiquitin-protein ligase rma1h1","protein_coding" "A4A49_08973","No alias","Nicotiana attenuata","helicase-like transcription factor chr28","protein_coding" "A4A49_08975","No alias","Nicotiana attenuata","mediator of rna polymerase ii transcription subunit 15a","protein_coding" "A4A49_09307","No alias","Nicotiana attenuata","SMARCA3-like protein 3","protein_coding" "A4A49_11877","No alias","Nicotiana attenuata","hypothetical protein","protein_coding" "A4A49_11937","No alias","Nicotiana attenuata","e3 ubiquitin-protein ligase rma1h1","protein_coding" "A4A49_12675","No alias","Nicotiana attenuata","putative e3 ubiquitin-protein ligase ring1a","protein_coding" "A4A49_15125","No alias","Nicotiana attenuata","e3 ubiquitin-protein ligase rma1h1","protein_coding" "A4A49_17011","No alias","Nicotiana attenuata","atp-dependent rna helicase deah12, chloroplastic","protein_coding" "A4A49_17606","No alias","Nicotiana attenuata","hypothetical protein","protein_coding" "A4A49_17680","No alias","Nicotiana attenuata","SMARCA3-like 1","protein_coding" "A4A49_17694","No alias","Nicotiana attenuata","e3 ubiquitin-protein ligase rma1h1","protein_coding" "A4A49_19126","No alias","Nicotiana attenuata","zinc finger ccch domain-containing protein 69","protein_coding" "A4A49_20038","No alias","Nicotiana attenuata","hypothetical protein","protein_coding" "A4A49_20219","No alias","Nicotiana attenuata","helicase-like transcription factor chr28","protein_coding" "A4A49_26573","No alias","Nicotiana attenuata","putative e3 ubiquitin-protein ligase ari10","protein_coding" "A4A49_30561","No alias","Nicotiana attenuata","hypothetical protein","protein_coding" "A4A49_36958","No alias","Nicotiana attenuata","zinc finger ccch domain-containing protein 69","protein_coding" "A4A49_37981","No alias","Nicotiana attenuata","peroxisome biogenesis protein 2","protein_coding" "A4A49_38153","No alias","Nicotiana attenuata","e3 ubiquitin-protein ligase rma1h1","protein_coding" "A4A49_38871","No alias","Nicotiana attenuata","hypothetical protein","protein_coding" "A4A49_39944","No alias","Nicotiana attenuata","zinc finger ccch domain-containing protein 69","protein_coding" "A4A49_40027","No alias","Nicotiana attenuata","putative e3 ubiquitin-protein ligase ari2","protein_coding" "A4A49_53072","No alias","Nicotiana attenuata","e3 ubiquitin-protein ligase rma1h1","protein_coding" "A4A49_62879","No alias","Nicotiana attenuata","zinc finger ccch domain-containing protein 69","protein_coding" "At1g05120","No alias","Arabidopsis thaliana","Helicase protein with RING/U-box domain [Source:TAIR;Acc:AT1G05120]","protein_coding" "At1g11100","No alias","Arabidopsis thaliana","SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SUU4]","protein_coding" "At1g47570","No alias","Arabidopsis thaliana","At1g47570 [Source:UniProtKB/TrEMBL;Acc:Q6NL06]","protein_coding" "At1g57800","No alias","Arabidopsis thaliana","zinc finger (C3HC4-type RING finger) family protein [Source:TAIR;Acc:AT1G57800]","protein_coding" "At1g67180","No alias","Arabidopsis thaliana","F5A8.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9ZW89]","protein_coding" "At1g74990","No alias","Arabidopsis thaliana","At1g74990 [Source:UniProtKB/TrEMBL;Acc:Q9S7D6]","protein_coding" "At1g79810","No alias","Arabidopsis thaliana","Peroxisome biogenesis protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA86]","protein_coding" "At2g25360","No alias","Arabidopsis thaliana","RBR-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:Q9SKL2]","protein_coding" "At2g26135","No alias","Arabidopsis thaliana","RBR-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F4ITM2]","protein_coding" "At2g45135","No alias","Arabidopsis thaliana","RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IW24]","protein_coding" "At3g05250","No alias","Arabidopsis thaliana","At3g05250 [Source:UniProtKB/TrEMBL;Acc:Q8GYA2]","protein_coding" "At3g08505","No alias","Arabidopsis thaliana","E3 ubiquitin-protein ligase makorin [Source:UniProtKB/Swiss-Prot;Acc:Q6IDS6]","protein_coding" "At3g20010","No alias","Arabidopsis thaliana","Helicase-like transcription factor CHR27 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHE4]","protein_coding" "At3g26730","No alias","Arabidopsis thaliana","Putative RING zinc finger protein [Source:UniProtKB/TrEMBL;Acc:Q9LSE3]","protein_coding" "At3g27330","No alias","Arabidopsis thaliana","Zinc finger (C3HC4-type RING finger) family protein [Source:UniProtKB/TrEMBL;Acc:F4IWG7]","protein_coding" "At3g43180","No alias","Arabidopsis thaliana","RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LXL6]","protein_coding" "At3g43750","No alias","Arabidopsis thaliana","RBR-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:Q9LZH2]","protein_coding" "At3g45470","No alias","Arabidopsis thaliana","RBR-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:Q9M1G0]","protein_coding" "At3g45540","No alias","Arabidopsis thaliana","RBR-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:Q9M1F3]","protein_coding" "At4g19670","No alias","Arabidopsis thaliana","RBR-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:O81849]","protein_coding" "At4g27470","No alias","Arabidopsis thaliana","RMA3 [Source:UniProtKB/TrEMBL;Acc:A0A178V4H3]","protein_coding" "At4g33940","No alias","Arabidopsis thaliana","At4g33940 [Source:UniProtKB/TrEMBL;Acc:Q501G9]","protein_coding" "At5g12310","No alias","Arabidopsis thaliana","AT5g19430/F7K24_180 [Source:UniProtKB/TrEMBL;Acc:Q94CL1]","protein_coding" "At5g43530","No alias","Arabidopsis thaliana","DNA repair protein RAD5B [Source:UniProtKB/Swiss-Prot;Acc:Q9FIY7]","protein_coding" "At5g60250","No alias","Arabidopsis thaliana","RBR-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:Q9LSS2]","protein_coding" "Bradi1g04550","No alias","Brachypodium distachyon","RING/U-box superfamily protein","protein_coding" "Bradi2g09510","No alias","Brachypodium distachyon","RING/U-box superfamily protein","protein_coding" "Bradi2g09520","No alias","Brachypodium distachyon","RING/U-box superfamily protein","protein_coding" "Bradi2g18110","No alias","Brachypodium distachyon","zinc finger (C3HC4-type RING finger) family protein","protein_coding" "Bradi2g26547","No alias","Brachypodium distachyon","protein kinases;ubiquitin-protein ligases","protein_coding" "Bradi2g50940","No alias","Brachypodium distachyon","RING/U-box superfamily protein","protein_coding" "Bradi2g53980","No alias","Brachypodium distachyon","RING/U-box superfamily protein","protein_coding" "Bradi3g16210","No alias","Brachypodium distachyon","RING/U-box superfamily protein","protein_coding" "Bradi3g17110","No alias","Brachypodium distachyon","Pex2/Pex12 N-terminal domain-containing protein / zinc finger (C3HC4-type RING finger) family protein","protein_coding" "Bradi3g37440","No alias","Brachypodium distachyon","RING/U-box superfamily protein","protein_coding" "Bradi3g44347","No alias","Brachypodium distachyon","RING/U-box superfamily protein","protein_coding" "Bradi3g49870","No alias","Brachypodium distachyon","RING membrane-anchor 3","protein_coding" "Bradi3g53502","No alias","Brachypodium distachyon","zinc finger (CCCH-type/C3HC4-type RING finger) family protein","protein_coding" "Bradi4g18307","No alias","Brachypodium distachyon","RING/U-box superfamily protein","protein_coding" "Bradi4g31046","No alias","Brachypodium distachyon","RING/U-box superfamily protein","protein_coding" "Bradi4g39250","No alias","Brachypodium distachyon","zinc finger (C3HC4-type RING finger) family protein","protein_coding" "Bradi4g45200","No alias","Brachypodium distachyon","zinc finger (C3HC4-type RING finger) family protein","protein_coding" "Bradi5g16540","No alias","Brachypodium distachyon","RING membrane-anchor 1","protein_coding" "Bradi5g22745","No alias","Brachypodium distachyon","SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related","protein_coding" "Brara.A00421.1","No alias","Brassica rapa","E3 ubiquitin ligase *(RNF170)","protein_coding" "Brara.A01062.1","No alias","Brassica rapa","plant-specific E3 ubiquitin ligase *(RSL/RFA)","protein_coding" "Brara.A01717.1","No alias","Brassica rapa","E3 ubiquitin ligase *(RMA/MUSE)","protein_coding" "Brara.A01799.1","No alias","Brassica rapa","E3 ubiquitin ligase *(RMA/MUSE)","protein_coding" "Brara.A03538.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.B00784.1","No alias","Brassica rapa","E3 ubiquitin ligase *(CHY)","protein_coding" "Brara.B01224.1","No alias","Brassica rapa","plant-specific E3 ubiquitin ligase *(RSL/RFA)","protein_coding" "Brara.B01225.1","No alias","Brassica rapa","plant-specific E3 ubiquitin ligase *(RSL/RFA)","protein_coding" "Brara.B01701.1","No alias","Brassica rapa","E3 ubiquitin ligase *(STUBL2)","protein_coding" "Brara.B01857.1","No alias","Brassica rapa","plant-specific E3 ubiquitin ligase *(RSL/RFA)","protein_coding" "Brara.B03053.1","No alias","Brassica rapa","plant-specific E3 ubiquitin ligase *(RSL/RFA)","protein_coding" "Brara.B03245.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.B03289.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.C00415.1","No alias","Brassica rapa","E3 ubiquitin ligase *(RBR-Helicase)","protein_coding" "Brara.C00521.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.C00836.1","No alias","Brassica rapa","E3 ubiquitin ligase *(CHY)","protein_coding" "Brara.C01626.1","No alias","Brassica rapa","RBR-Ariadne-class E3 ubiquitin ligase","protein_coding" "Brara.C02419.1","No alias","Brassica rapa","plant-specific E3 ubiquitin ligase *(RSL/RFA)","protein_coding" "Brara.C02653.1","No alias","Brassica rapa","substrate adaptor *(SKIP8) of SCF E3 ubiquitin ligase complex","protein_coding" "Brara.C03243.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.C03768.1","No alias","Brassica rapa","chromatin remodeling factor *(Ris1)","protein_coding" "Brara.C04290.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.D02486.1","No alias","Brassica rapa","chromatin remodeling factor *(SHPRH)","protein_coding" "Brara.E00821.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.E03380.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.F01844.1","No alias","Brassica rapa","plant-specific E3 ubiquitin ligase *(RSL/RFA)","protein_coding" "Brara.F03801.1","No alias","Brassica rapa","chromatin remodeling factor *(Rad5)","protein_coding" "Brara.G01331.1","No alias","Brassica rapa","plant-specific E3 ubiquitin ligase *(RSL/RFA)","protein_coding" "Brara.G01773.1","No alias","Brassica rapa","E3 ubiquitin ligase *(RMA/MUSE)","protein_coding" "Brara.G02006.1","No alias","Brassica rapa","component *(Pex2) of receptor polyubiquitination system","protein_coding" "Brara.G02568.1","No alias","Brassica rapa","regulatory E3 ubiquitin ligase (ORTH/VIM) of RNA-independent DNA methylation","protein_coding" "Brara.G03318.1","No alias","Brassica rapa","E3 ubiquitin ligase *(RMA/MUSE)","protein_coding" "Brara.H00724.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.H01515.1","No alias","Brassica rapa","E3 ubiquitin ligase *(RMA/MUSE)","protein_coding" "Brara.H02249.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.H03012.1","No alias","Brassica rapa","chromatin remodeling factor *(Rad5-like)","protein_coding" "Brara.I04008.1","No alias","Brassica rapa","E3 ubiquitin ligase *(RMA/MUSE)","protein_coding" "Brara.I05008.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.I05555.1","No alias","Brassica rapa","E3 ubiquitin ligase *(NLA)","protein_coding" "Brara.J00136.1","No alias","Brassica rapa","E3 ubiquitin ligase *(NLA)","protein_coding" "Brara.J00330.1","No alias","Brassica rapa","chromatin remodeling factor *(Rad5-like)","protein_coding" "Brara.J00334.1","No alias","Brassica rapa","chromatin remodeling factor *(Rad5-like)","protein_coding" "Brara.J01181.1","No alias","Brassica rapa","E3 ubiquitin ligase *(XBAT3)","protein_coding" "Brara.J02162.1","No alias","Brassica rapa","Unknown function","protein_coding" "Brara.K00086.1","No alias","Brassica rapa","E3 ubiquitin ligase *(RMA/MUSE)","protein_coding" "Brara.K00973.1","No alias","Brassica rapa","E3 ubiquitin ligase *(RNF170)","protein_coding" "Brara.K01584.1","No alias","Brassica rapa","plant-specific E3 ubiquitin ligase *(RSL/RFA)","protein_coding" "Brara.K01775.1","No alias","Brassica rapa","Unknown function","protein_coding" "Cre01.g046237","No alias","Chlamydomonas reinhardtii","SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related","protein_coding" "Cre02.g119800","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre05.g238374","No alias","Chlamydomonas reinhardtii","zinc finger (C3HC4-type RING finger) family protein","protein_coding" "Cre05.g240200","No alias","Chlamydomonas reinhardtii","Function unknown","protein_coding" "Cre05.g247500","No alias","Chlamydomonas reinhardtii","zinc finger (C3HC4-type RING finger) family protein","protein_coding" "Cre06.g278136","No alias","Chlamydomonas reinhardtii","zinc finger (CCCH-type/C3HC4-type RING finger) family protein","protein_coding" "Cre07.g334650","No alias","Chlamydomonas reinhardtii","breast cancer susceptibility1","protein_coding" "Cre10.g453350","No alias","Chlamydomonas reinhardtii","RING/U-box superfamily protein","protein_coding" "Cre10.g455750","No alias","Chlamydomonas reinhardtii","DNA/RNA helicase protein","protein_coding" "Cre11.g479300","No alias","Chlamydomonas reinhardtii","Helicase protein with RING/U-box domain","protein_coding" "Cre12.g545600","No alias","Chlamydomonas reinhardtii","DREB2A-interacting protein 2","protein_coding" "Cre17.g698800","No alias","Chlamydomonas reinhardtii","Pex2/Pex12 N-terminal domain-containing protein / zinc finger (C3HC4-type RING finger) family protein","protein_coding" "Cre17.g721950","No alias","Chlamydomonas reinhardtii","RING/U-box superfamily protein","protein_coding" "Cre17.g739100","No alias","Chlamydomonas reinhardtii","RING/U-box superfamily protein","protein_coding" "evm.model.contig_2177.2","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_2280.3","No alias","Porphyridium purpureum","(at2g23780 : 127.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G19310.1); Has 3846 Blast hits to 3838 proteins in 274 species: Archae - 0; Bacteria - 0; Metazoa - 2175; Fungi - 493; Plants - 714; Viruses - 21; Other Eukaryotes - 443 (source: NCBI BLink). & (reliability: 254.0) & (original description: no original description)","protein_coding" "evm.model.contig_4487.4","No alias","Porphyridium purpureum"," no hits & (original description: no original description)","protein_coding" "evm.model.contig_496.18","No alias","Porphyridium purpureum","(at3g26730 : 102.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841); Has 5292 Blast hits to 2238 proteins in 281 species: Archae - 3; Bacteria - 121; Metazoa - 1602; Fungi - 487; Plants - 437; Viruses - 6; Other Eukaryotes - 2636 (source: NCBI BLink). & (reliability: 204.0) & (original description: no original description)","protein_coding" "evm.model.tig00000025.15","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000042.258","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000144.121","No alias","Cyanophora paradoxa","(at5g58410 : 129.0) HEAT/U-box domain-containing protein; FUNCTIONS IN: binding, zinc ion binding; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Armadillo-type fold (InterPro:IPR016024); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 258.0) & (original description: no original description)","protein_coding" "evm.model.tig00000215.122","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000473.2","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000540.8","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000789.6","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00000944.27","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00001331.4","No alias","Cyanophora paradoxa","(at1g19310 : 110.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G23780.1); Has 4673 Blast hits to 4665 proteins in 300 species: Archae - 0; Bacteria - 6; Metazoa - 2731; Fungi - 589; Plants - 822; Viruses - 25; Other Eukaryotes - 500 (source: NCBI BLink). & (reliability: 220.0) & (original description: no original description)","protein_coding" "evm.model.tig00020553.75","No alias","Cyanophora paradoxa","(at1g79810 : 174.0) Dominant suppressor of det1 phenotypes. Encodes a peroxisomal protein essential for Arabidopsis growth. Inserted directly from the cytosol into peroxisomes.; REVERSAL OF THE DET PHENOTYPE 3 (TED3); FUNCTIONS IN: zinc ion binding; INVOLVED IN: protein import into peroxisome matrix, fatty acid beta-oxidation, peroxisome organization, photomorphogenesis; LOCATED IN: cytosol, peroxisome; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Pex, N-terminal (InterPro:IPR006845), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 348.0) & (original description: no original description)","protein_coding" "evm.model.tig00020560.25","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020614.74","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020616.39","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00020684.21","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021072.11","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021374.42","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "evm.model.tig00021489.18","No alias","Cyanophora paradoxa"," no hits & (original description: no original description)","protein_coding" "Glyma.02G219200","No alias","Glycine max","zinc ion binding;DNA binding;helicases;ATP binding;nucleic acid binding","protein_coding" "Glyma.05G198100","No alias","Glycine max","RING/U-box superfamily protein","protein_coding" "Glyma.06G293400","No alias","Glycine max","RING membrane-anchor 1","protein_coding" "Glyma.07G018400","No alias","Glycine max","Pex2/Pex12 N-terminal domain-containing protein / zinc finger (C3HC4-type RING finger) family protein","protein_coding" "Glyma.07G192500","No alias","Glycine max","SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related","protein_coding" "Glyma.07G196000","No alias","Glycine max","RING membrane-anchor 1","protein_coding" "Glyma.08G153800","No alias","Glycine max","zinc finger (CCCH-type/C3HC4-type RING finger) family protein","protein_coding" "Glyma.08G154100","No alias","Glycine max","zinc finger (CCCH-type/C3HC4-type RING finger) family protein","protein_coding" "Glyma.08G203400","No alias","Glycine max","Pex2/Pex12 N-terminal domain-containing protein / zinc finger (C3HC4-type RING finger) family protein","protein_coding" "Glyma.09G074200","No alias","Glycine max","RING/U-box superfamily protein","protein_coding" "Glyma.09G206500","No alias","Glycine max","NDR1/HIN1-like 8","protein_coding" "Glyma.10G007980","No alias","Glycine max","Helicase protein with RING/U-box domain","protein_coding" "Glyma.10G155500","No alias","Glycine max","RING/U-box superfamily protein","protein_coding" "Glyma.12G001300","No alias","Glycine max","Zinc finger (C3HC4-type RING finger) family protein","protein_coding" "Glyma.12G192700","No alias","Glycine max","Helicase protein with RING/U-box domain","protein_coding" "Glyma.12G203900","No alias","Glycine max","RING membrane-anchor 1","protein_coding" "Glyma.13G179900","No alias","Glycine max","RING membrane-anchor 1","protein_coding" "Glyma.13G183900","No alias","Glycine max","SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related","protein_coding" "Glyma.13G239500","No alias","Glycine max","RING membrane-anchor 1","protein_coding" "Glyma.13G243600","No alias","Glycine max","SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related","protein_coding" "Glyma.13G297700","No alias","Glycine max","RING membrane-anchor 1","protein_coding" "Glyma.13G309700","No alias","Glycine max","Helicase protein with RING/U-box domain","protein_coding" "Glyma.14G186500","No alias","Glycine max","zinc ion binding;DNA binding;helicases;ATP binding;nucleic acid binding","protein_coding" "Glyma.15G073700","No alias","Glycine max","RING membrane-anchor 1","protein_coding" "Glyma.15G097300","No alias","Glycine max","CHY-type/CTCHY-type/RING-type Zinc finger protein","protein_coding" "Glyma.15G272400","No alias","Glycine max","zinc finger (CCCH-type/C3HC4-type RING finger) family protein","protein_coding" "Glyma.15G273000","No alias","Glycine max","zinc finger (CCCH-type/C3HC4-type RING finger) family protein","protein_coding" "Glyma.16G048700","No alias","Glycine max","RING/U-box superfamily protein","protein_coding" "Glyma.16G063400","No alias","Glycine max","zinc finger (C3HC4-type RING finger) family protein","protein_coding" "Glyma.19G042100","No alias","Glycine max","zinc finger (C3HC4-type RING finger) family protein / BRCT domain-containing protein","protein_coding" "Glyma.19G082000","No alias","Glycine max","zinc finger (C3HC4-type RING finger) family protein","protein_coding" "Glyma.19G103000","No alias","Glycine max","RING/U-box superfamily protein","protein_coding" "Glyma.20G100800","No alias","Glycine max","SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related","protein_coding" "Glyma.20G232800","No alias","Glycine max","RING/U-box superfamily protein","protein_coding" "Glyma.U031125","No alias","Glycine max","RING/U-box superfamily protein","protein_coding" "GRMZM2G002280","No alias","Zea mays","zinc finger (C3HC4-type RING finger) family protein","protein_coding" "GRMZM2G020996","No alias","Zea mays","zinc finger (C3HC4-type RING finger) family protein","protein_coding" "GRMZM2G021233","No alias","Zea mays","Helicase protein with RING/U-box domain","protein_coding" "GRMZM2G022711","No alias","Zea mays","RING/U-box superfamily protein","protein_coding" "GRMZM2G040207","No alias","Zea mays","RING/U-box superfamily protein","protein_coding" "GRMZM2G040803","No alias","Zea mays","RING membrane-anchor 1","protein_coding" "GRMZM2G052688","No alias","Zea mays","breast cancer associated RING 1","protein_coding" "GRMZM2G064580","No alias","Zea mays","RING/U-box superfamily protein","protein_coding" "GRMZM2G066171","No alias","Zea mays","RING/U-box superfamily protein","protein_coding" "GRMZM2G078526","No alias","Zea mays","RING membrane-anchor 1","protein_coding" "GRMZM2G096281","No alias","Zea mays","zinc finger (C3HC4-type RING finger) family protein","protein_coding" "GRMZM2G116714","No alias","Zea mays","Pex2/Pex12 N-terminal domain-containing protein / zinc finger (C3HC4-type RING finger) family protein","protein_coding" "GRMZM2G169994","No alias","Zea mays","RING membrane-anchor 1","protein_coding" "GRMZM2G343972","No alias","Zea mays","Zinc finger (C3HC4-type RING finger) family protein","protein_coding" "GRMZM2G395842","No alias","Zea mays","zinc finger (CCCH-type/C3HC4-type RING finger) family protein","protein_coding" "GRMZM2G424582","No alias","Zea mays","protein kinases;ubiquitin-protein ligases","protein_coding" "GRMZM2G457544","No alias","Zea mays","DREB2A-interacting protein 2","protein_coding" "GRMZM5G812265","No alias","Zea mays","protein kinases;ubiquitin-protein ligases","protein_coding" "HORVU2Hr1G091220.1","No alias","Hordeum vulgare","E3 ubiquitin ligase *(RMA/MUSE)","protein_coding" "HORVU2Hr1G106310.1","No alias","Hordeum vulgare","E3 ubiquitin ligase *(ARA54)","protein_coding" "HORVU2Hr1G121350.16","No alias","Hordeum vulgare","plant-specific E3 ubiquitin ligase *(RSL/RFA)","protein_coding" "HORVU3Hr1G036310.2","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU3Hr1G087840.1","No alias","Hordeum vulgare","E3 ubiquitin ligase *(RMA/MUSE)","protein_coding" "HORVU5Hr1G043380.1","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU5Hr1G065300.1","No alias","Hordeum vulgare","plant-specific E3 ubiquitin ligase *(RSL/RFA)","protein_coding" "HORVU5Hr1G110170.2","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU6Hr1G060440.5","No alias","Hordeum vulgare","E3 ubiquitin ligase *(RMA/MUSE)","protein_coding" "HORVU6Hr1G075300.1","No alias","Hordeum vulgare","Unknown function","protein_coding" "HORVU7Hr1G066380.4","No alias","Hordeum vulgare","E3 ubiquitin ligase *(RMA/MUSE)","protein_coding" "HORVU7Hr1G072200.2","No alias","Hordeum vulgare","component *(Pex2) of receptor polyubiquitination system","protein_coding" "Kfl00019_0620","kfl00019_0620_v1.1","Klebsormidium nitens","(at1g79810 : 281.0) Dominant suppressor of det1 phenotypes. Encodes a peroxisomal protein essential for Arabidopsis growth. Inserted directly from the cytosol into peroxisomes.; REVERSAL OF THE DET PHENOTYPE 3 (TED3); FUNCTIONS IN: zinc ion binding; INVOLVED IN: protein import into peroxisome matrix, fatty acid beta-oxidation, peroxisome organization, photomorphogenesis; LOCATED IN: cytosol, peroxisome; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Pex, N-terminal (InterPro:IPR006845), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 562.0) & (original description: no original description)","protein_coding" "Kfl00060_0140","kfl00060_0140_v1.1","Klebsormidium nitens","(at1g55250 : 376.0) Encodes one of two orthologous E3 ubiquitin ligases in Arabidopsis that are involved in monoubiquitination of histone H2B.; histone mono-ubiquitination 2 (HUB2); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: histone mono-ubiquitination 1 (TAIR:AT2G44950.1). & (reliability: 752.0) & (original description: no original description)","protein_coding" "Kfl00114_0040","kfl00114_0040_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00258_0190","kfl00258_0190_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00295_0140","kfl00295_0140_v1.1","Klebsormidium nitens","(at3g05250 : 99.4) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); Has 547 Blast hits to 545 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 229; Fungi - 32; Plants - 178; Viruses - 65; Other Eukaryotes - 43 (source: NCBI BLink). & (reliability: 198.8) & (original description: no original description)","protein_coding" "Kfl00316_0020","kfl00316_0020_v1.1","Klebsormidium nitens","(at1g05120 : 616.0) Helicase protein with RING/U-box domain; FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G02670.1); Has 29218 Blast hits to 14448 proteins in 1607 species: Archae - 124; Bacteria - 8622; Metazoa - 6656; Fungi - 6694; Plants - 2674; Viruses - 189; Other Eukaryotes - 4259 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 101.0) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 1232.0) & (original description: no original description)","protein_coding" "Kfl00322_0020","kfl00322_0020_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl00612_0060","kfl00612_0060_v1.1","Klebsormidium nitens"," no hits & (original description: no original description)","protein_coding" "Kfl01074_0035","kfl01074_0035_v1.1","Klebsormidium nitens","(at1g05120 : 95.1) Helicase protein with RING/U-box domain; FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G02670.1); Has 29218 Blast hits to 14448 proteins in 1607 species: Archae - 124; Bacteria - 8622; Metazoa - 6656; Fungi - 6694; Plants - 2674; Viruses - 189; Other Eukaryotes - 4259 (source: NCBI BLink). & (reliability: 190.2) & (original description: no original description)","protein_coding" "Kfl01117_0020","kfl01117_0020_v1.1","Klebsormidium nitens","(at3g26730 : 221.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841); Has 5292 Blast hits to 2238 proteins in 281 species: Archae - 3; Bacteria - 121; Metazoa - 1602; Fungi - 487; Plants - 437; Viruses - 6; Other Eukaryotes - 2636 (source: NCBI BLink). & (reliability: 442.0) & (original description: no original description)","protein_coding" "LOC_Os01g15630","No alias","Oryza sativa","zinc finger, C3HC4 type domain containing protein, expressed","protein_coding" "LOC_Os01g56070","No alias","Oryza sativa","RING finger protein, putative, expressed","protein_coding" "LOC_Os01g61420","No alias","Oryza sativa","zinc finger, C3HC4 type domain containing protein, expressed","protein_coding" "LOC_Os02g31150","No alias","Oryza sativa","zinc finger, C3HC4 type domain containing protein, expressed","protein_coding" "LOC_Os02g42690","No alias","Oryza sativa","zinc finger, C3HC4 type domain containing protein, expressed","protein_coding" "LOC_Os03g58390","No alias","Oryza sativa","zinc finger, C3HC4 type domain containing protein, expressed","protein_coding" "LOC_Os03g59540","No alias","Oryza sativa","zinc finger, C3HC4 type domain containing protein, expressed","protein_coding" "LOC_Os04g43300","No alias","Oryza sativa","BRCA1 C Terminus domain containing protein, expressed","protein_coding" "LOC_Os04g44820","No alias","Oryza sativa","zinc finger, C3HC4 type domain containing protein, expressed","protein_coding" "LOC_Os04g53720","No alias","Oryza sativa","SNF2 family N-terminal domain containing protein, expressed","protein_coding" "LOC_Os05g01230","No alias","Oryza sativa","zinc finger, C3HC4 type domain containing protein, expressed","protein_coding" "LOC_Os05g19480","No alias","Oryza sativa","peroxisome assembly protein, putative, expressed","protein_coding" "LOC_Os06g21390","No alias","Oryza sativa","Zinc finger C-x8-C-x5-C-x3-H type domain containing protein, expressed","protein_coding" "LOC_Os09g25190","No alias","Oryza sativa","protein binding protein, putative, expressed","protein_coding" "LOC_Os09g26470","No alias","Oryza sativa","zinc finger, C3HC4 type family protein, expressed","protein_coding" "LOC_Os11g07450","No alias","Oryza sativa","zinc finger, C3HC4 type domain containing protein, expressed","protein_coding" "LOC_Os12g16690","No alias","Oryza sativa","zinc finger, C3HC4 type domain containing protein, expressed","protein_coding" "MA_10429141g0010","No alias","Picea abies","(at2g05160 : 284.0) CCCH-type zinc fingerfamily protein with RNA-binding domain; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein (TAIR:AT3G52980.1); Has 286 Blast hits to 218 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 277; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 568.0) & (original description: no original description)","protein_coding" "MA_10436725g0010","No alias","Picea abies","(at5g22920 : 398.0) CHY-type/CTCHY-type/RING-type Zinc finger protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CHY-type (InterPro:IPR008913), Zinc finger, CTCHY-type (InterPro:IPR017921), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: CHY-type/CTCHY-type/RING-type Zinc finger protein (TAIR:AT5G25560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 796.0) & (original description: no original description)","protein_coding" "MA_127060g0010","No alias","Picea abies","(at3g08505 : 409.0) zinc finger (CCCH-type/C3HC4-type RING finger) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 818.0) & (original description: no original description)","protein_coding" "MA_127251g0010","No alias","Picea abies","(at1g19310 : 231.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G23780.1); Has 4673 Blast hits to 4665 proteins in 300 species: Archae - 0; Bacteria - 6; Metazoa - 2731; Fungi - 589; Plants - 822; Viruses - 25; Other Eukaryotes - 500 (source: NCBI BLink). & (reliability: 462.0) & (original description: no original description)","protein_coding" "MA_132683g0020","No alias","Picea abies","(at3g58030 : 90.5) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G42030.1). & (reliability: 181.0) & (original description: no original description)","protein_coding" "MA_170316g0010","No alias","Picea abies","(at2g31510 : 436.0) ARIADNE 7 (ARI7); FUNCTIONS IN: zinc ion binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G05890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 872.0) & (original description: no original description)","protein_coding" "MA_191025g0010","No alias","Picea abies"," no hits & (original description: no original description)","protein_coding" "MA_27283g0010","No alias","Picea abies","(at3g26730 : 378.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841); Has 5292 Blast hits to 2238 proteins in 281 species: Archae - 3; Bacteria - 121; Metazoa - 1602; Fungi - 487; Plants - 437; Viruses - 6; Other Eukaryotes - 2636 (source: NCBI BLink). & (reliability: 756.0) & (original description: no original description)","protein_coding" "MA_3162g0020","No alias","Picea abies","(at3g53690 : 194.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G14250.1); Has 3158 Blast hits to 3141 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 1307; Fungi - 709; Plants - 671; Viruses - 0; Other Eukaryotes - 471 (source: NCBI BLink). & (reliability: 388.0) & (original description: no original description)","protein_coding" "MA_42020g0010","No alias","Picea abies","(at1g05120 : 343.0) Helicase protein with RING/U-box domain; FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G02670.1); Has 29218 Blast hits to 14448 proteins in 1607 species: Archae - 124; Bacteria - 8622; Metazoa - 6656; Fungi - 6694; Plants - 2674; Viruses - 189; Other Eukaryotes - 4259 (source: NCBI BLink). & (q7g8y3|isw2_orysa : 95.9) Probable chromatin remodelling complex ATPase chain (EC 3.6.1.-) (ISW2-like) (Sucrose nonfermenting protein 2 homolog) - Oryza sativa (Rice) & (reliability: 686.0) & (original description: no original description)","protein_coding" "Mp2g13910.1","No alias","Marchantia polymorpha","E3 ubiquitin-protein ligase makorin OS=Oryza sativa subsp. japonica (sp|q5za07|c3h41_orysj : 311.0)","protein_coding" "Mp2g15500.1","No alias","Marchantia polymorpha","RBR-Ariadne-class E3 ubiquitin ligase","protein_coding" "Mp3g05360.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp3g06120.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp3g11370.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp3g24630.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp5g23860.1","No alias","Marchantia polymorpha","plant-specific E3 ubiquitin ligase (RSL/RFA)","protein_coding" "Mp7g01000.1","No alias","Marchantia polymorpha","E3 ubiquitin ligase (RBR-Helicase)","protein_coding" "Mp7g11850.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Mp7g11900.1","No alias","Marchantia polymorpha","chromatin remodeling factor (Rad5-like)","protein_coding" "Mp8g05690.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding" "Potri.001G037200","No alias","Populus trichocarpa","RING/U-box superfamily protein","protein_coding" "Potri.001G186000","No alias","Populus trichocarpa","Pex2/Pex12 N-terminal domain-containing protein / zinc finger (C3HC4-type RING finger) family protein","protein_coding" "Potri.001G268200","No alias","Populus trichocarpa","zinc finger (CCCH-type/C3HC4-type RING finger) family protein","protein_coding" "Potri.001G336832","No alias","Populus trichocarpa","zinc finger (C3HC4-type RING finger) family protein","protein_coding" "Potri.002G131300","No alias","Populus trichocarpa","IBR domain-containing protein","protein_coding" "Potri.002G133000","No alias","Populus trichocarpa","RING/U-box superfamily protein","protein_coding" "Potri.003G051500","No alias","Populus trichocarpa","Pex2/Pex12 N-terminal domain-containing protein / zinc finger (C3HC4-type RING finger) family protein","protein_coding" "Potri.003G187700","No alias","Populus trichocarpa","RING/U-box superfamily protein","protein_coding" "Potri.004G037700","No alias","Populus trichocarpa","SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related","protein_coding" "Potri.004G042700","No alias","Populus trichocarpa","RING membrane-anchor 1","protein_coding" "Potri.004G137900","No alias","Populus trichocarpa","RING/U-box superfamily protein","protein_coding" "Potri.004G143900","No alias","Populus trichocarpa","RING/U-box superfamily protein","protein_coding" "Potri.005G034800","No alias","Populus trichocarpa","RING/U-box superfamily protein","protein_coding" "Potri.005G035600","No alias","Populus trichocarpa","RING/U-box superfamily protein","protein_coding" "Potri.005G071500","No alias","Populus trichocarpa","helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related","protein_coding" "Potri.006G035700","No alias","Populus trichocarpa","DNA/RNA helicase protein","protein_coding" "Potri.006G063100","No alias","Populus trichocarpa","RING/U-box superfamily protein","protein_coding" "Potri.006G193600","No alias","Populus trichocarpa","RING/U-box superfamily protein","protein_coding" "Potri.009G062600","No alias","Populus trichocarpa","zinc finger (CCCH-type/C3HC4-type RING finger) family protein","protein_coding" "Potri.009G120000","No alias","Populus trichocarpa","RING/U-box superfamily protein","protein_coding" "Potri.011G046400","No alias","Populus trichocarpa","SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related","protein_coding" "Potri.011G051800","No alias","Populus trichocarpa","RING membrane-anchor 1","protein_coding" "Potri.012G119000","No alias","Populus trichocarpa","RING/U-box superfamily protein","protein_coding" "Potri.013G132300","No alias","Populus trichocarpa","RING membrane-anchor 1","protein_coding" "Potri.014G055800","No alias","Populus trichocarpa","histone mono-ubiquitination 1","protein_coding" "Potri.014G145300","No alias","Populus trichocarpa","RING/U-box superfamily protein","protein_coding" "Potri.014G154600","No alias","Populus trichocarpa","Helicase protein with RING/U-box domain","protein_coding" "Potri.015G117600","No alias","Populus trichocarpa","RING/U-box superfamily protein","protein_coding" "Potri.016G033600","No alias","Populus trichocarpa","DNA/RNA helicase protein","protein_coding" "Potri.016G033700","No alias","Populus trichocarpa","DNA/RNA helicase protein","protein_coding" "Potri.016G058300","No alias","Populus trichocarpa","RING/U-box superfamily protein","protein_coding" "Potri.019G060900","No alias","Populus trichocarpa","zinc ion binding;DNA binding;helicases;ATP binding;nucleic acid binding","protein_coding" "Pp1s127_49V6","No alias","Physcomitrella patens","ring finger","protein_coding" "Pp1s154_11V6","No alias","Physcomitrella patens","ring finger 2","protein_coding" "Pp1s286_43V6","No alias","Physcomitrella patens","zinc ion binding","protein_coding" "Pp1s29_248V6","No alias","Physcomitrella patens","tripartite motif protein 39","protein_coding" "Pp1s313_51V6","No alias","Physcomitrella patens","glutathione peroxidase","protein_coding" "Pp1s376_4V6","No alias","Physcomitrella patens","ring zinc finger-containing protein","protein_coding" "Pp1s381_35V6","No alias","Physcomitrella patens","zinc finger","protein_coding" "Pp1s3_476V6","No alias","Physcomitrella patens","snf2 histone linker phd ring helicase","protein_coding" "Pp1s45_255V6","No alias","Physcomitrella patens","ring finger and chy zinc finger domain-containing protein 1","protein_coding" "Pp1s47_310V6","No alias","Physcomitrella patens","zinc finger","protein_coding" "Pp1s51_131V6","No alias","Physcomitrella patens","zinc finger","protein_coding" "Pp1s74_81V6","No alias","Physcomitrella patens","protein binding","protein_coding" "Pp1s9_415V6","No alias","Physcomitrella patens","ring finger protein 10","protein_coding" "PSME_00005637-RA","No alias","Pseudotsuga menziesii","(at3g08505 : 206.0) zinc finger (CCCH-type/C3HC4-type RING finger) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 412.0) & (original description: no original description)","protein_coding" "PSME_00007230-RA","No alias","Pseudotsuga menziesii","(at3g14250 : 141.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: egg cell; CONTAINS InterPro DOMAIN/s: Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G53690.1); Has 3093 Blast hits to 3074 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 1283; Fungi - 653; Plants - 677; Viruses - 1; Other Eukaryotes - 479 (source: NCBI BLink). & (reliability: 282.0) & (original description: no original description)","protein_coding" "PSME_00012491-RA","No alias","Pseudotsuga menziesii","(at1g05120 : 579.0) Helicase protein with RING/U-box domain; FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, ATP binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G02670.1); Has 29218 Blast hits to 14448 proteins in 1607 species: Archae - 124; Bacteria - 8622; Metazoa - 6656; Fungi - 6694; Plants - 2674; Viruses - 189; Other Eukaryotes - 4259 (source: NCBI BLink). & (reliability: 1158.0) & (original description: no original description)","protein_coding" "PSME_00012865-RA","No alias","Pseudotsuga menziesii","(at5g03450 : 188.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G03750.1); Has 6680 Blast hits to 3674 proteins in 290 species: Archae - 4; Bacteria - 114; Metazoa - 3367; Fungi - 525; Plants - 736; Viruses - 186; Other Eukaryotes - 1748 (source: NCBI BLink). & (reliability: 376.0) & (original description: no original description)","protein_coding" "PSME_00018028-RA","No alias","Pseudotsuga menziesii","(at3g26730 : 441.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841); Has 5292 Blast hits to 2238 proteins in 281 species: Archae - 3; Bacteria - 121; Metazoa - 1602; Fungi - 487; Plants - 437; Viruses - 6; Other Eukaryotes - 2636 (source: NCBI BLink). & (reliability: 882.0) & (original description: no original description)","protein_coding" "PSME_00027724-RA","No alias","Pseudotsuga menziesii","(at5g60250 : 241.0) zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G25370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 482.0) & (original description: no original description)","protein_coding" "PSME_00032743-RA","No alias","Pseudotsuga menziesii","(at3g08505 : 397.0) zinc finger (CCCH-type/C3HC4-type RING finger) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 794.0) & (original description: no original description)","protein_coding" "PSME_00033910-RA","No alias","Pseudotsuga menziesii","(at2g05160 : 306.0) CCCH-type zinc fingerfamily protein with RNA-binding domain; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein (TAIR:AT3G52980.1); Has 286 Blast hits to 218 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 277; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 612.0) & (original description: no original description)","protein_coding" "PSME_00042941-RA","No alias","Pseudotsuga menziesii","(at3g53690 : 177.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G14250.1); Has 3158 Blast hits to 3141 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 1307; Fungi - 709; Plants - 671; Viruses - 0; Other Eukaryotes - 471 (source: NCBI BLink). & (reliability: 354.0) & (original description: no original description)","protein_coding" "PSME_00044035-RA","No alias","Pseudotsuga menziesii","(at3g14250 : 157.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: egg cell; CONTAINS InterPro DOMAIN/s: Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G53690.1); Has 3093 Blast hits to 3074 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 1283; Fungi - 653; Plants - 677; Viruses - 1; Other Eukaryotes - 479 (source: NCBI BLink). & (reliability: 314.0) & (original description: no original description)","protein_coding" "PSME_00047840-RA","No alias","Pseudotsuga menziesii","(at3g08505 : 270.0) zinc finger (CCCH-type/C3HC4-type RING finger) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571), Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 540.0) & (original description: no original description)","protein_coding" "PSME_00057075-RA","No alias","Pseudotsuga menziesii","(at1g19310 : 192.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G23780.1); Has 4673 Blast hits to 4665 proteins in 300 species: Archae - 0; Bacteria - 6; Metazoa - 2731; Fungi - 589; Plants - 822; Viruses - 25; Other Eukaryotes - 500 (source: NCBI BLink). & (reliability: 384.0) & (original description: no original description)","protein_coding" "Seita.1G107900.1","No alias","Setaria italica ","component *(Pex2) of receptor polyubiquitination system","protein_coding" "Seita.1G173100.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.1G249200.1","No alias","Setaria italica ","E3 ubiquitin ligase *(RMA/MUSE)","protein_coding" "Seita.2G058800.1","No alias","Setaria italica ","modification writer component *(BMI1) of modification writer protein components","protein_coding" "Seita.2G206800.1","No alias","Setaria italica ","plant-specific E3 ubiquitin ligase *(RSL/RFA)","protein_coding" "Seita.2G207000.1","No alias","Setaria italica ","plant-specific E3 ubiquitin ligase *(RSL/RFA)","protein_coding" "Seita.2G297900.1","No alias","Setaria italica ","chromatin remodeling factor *(Rad5) & chromatin remodeling factor *(Ris1)","protein_coding" "Seita.2G328700.1","No alias","Setaria italica ","chromatin remodeling factor *(Rad5-like)","protein_coding" "Seita.2G428600.1","No alias","Setaria italica ","E3 ubiquitin ligase *(NLA)","protein_coding" "Seita.3G090000.1","No alias","Setaria italica ","regulatory E3 ubiquitin ligase (ORTH/VIM) of RNA-independent DNA methylation","protein_coding" "Seita.3G115400.1","No alias","Setaria italica ","regulatory E3 ubiquitin ligase (ORTH/VIM) of RNA-independent DNA methylation","protein_coding" "Seita.3G197600.1","No alias","Setaria italica ","chromatin remodeling factor *(Rad5) & chromatin remodeling factor *(Ris1)","protein_coding" "Seita.3G255000.1","No alias","Setaria italica ","signal transducer of abscisic acid perception *(KEG) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Seita.3G298300.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.3G401100.1","No alias","Setaria italica ","plant-specific E3 ubiquitin ligase *(RSL/RFA)","protein_coding" "Seita.4G138800.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.5G054700.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.5G367900.1","No alias","Setaria italica ","E3 ubiquitin ligase *(RMA/MUSE)","protein_coding" "Seita.7G167800.1","No alias","Setaria italica ","E3 ubiquitin ligase *(RMA/MUSE)","protein_coding" "Seita.7G177900.1","No alias","Setaria italica ","E3 ubiquitin ligase *(RMA/MUSE)","protein_coding" "Seita.7G248300.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.7G300400.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.9G042700.1","No alias","Setaria italica ","Unknown function","protein_coding" "Seita.9G270700.1","No alias","Setaria italica ","component *(Pex2) of receptor polyubiquitination system","protein_coding" "Sobic.001G055900.1","No alias","Sorghum bicolor ","modification writer component *(BMI1) of modification writer protein components","protein_coding" "Sobic.002G055800.1","No alias","Sorghum bicolor ","modification writer component *(BMI1) of modification writer protein components","protein_coding" "Sobic.002G126100.1","No alias","Sorghum bicolor ","plant-specific E3 ubiquitin ligase *(RSL/RFA)","protein_coding" "Sobic.002G203500.2","No alias","Sorghum bicolor ","plant-specific E3 ubiquitin ligase *(RSL/RFA)","protein_coding" "Sobic.002G212400.1","No alias","Sorghum bicolor ","plant-specific E3 ubiquitin ligase *(RSL/RFA)","protein_coding" "Sobic.002G315100.1","No alias","Sorghum bicolor ","chromatin remodeling factor *(Rad5-like)","protein_coding" "Sobic.002G413700.1","No alias","Sorghum bicolor ","E3 ubiquitin ligase *(NLA)","protein_coding" "Sobic.002G426800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.003G060800.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.003G119700.2","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.003G148000.3","No alias","Sorghum bicolor ","E3 ubiquitin ligase *(RMA/MUSE)","protein_coding" "Sobic.003G343600.1","No alias","Sorghum bicolor ","E3 ubiquitin ligase *(RMA/MUSE)","protein_coding" "Sobic.004G158200.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Sobic.004G228100.2","No alias","Sorghum bicolor ","E3 ubiquitin ligase *(RMA/MUSE)","protein_coding" "Sobic.005G051050.1","No alias","Sorghum bicolor ","E3 ubiquitin ligase *(RMA/MUSE)","protein_coding" "Sobic.006G144700.1","No alias","Sorghum bicolor ","component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination heterodimer","protein_coding" "Sobic.006G157500.1","No alias","Sorghum bicolor ","E3 ubiquitin ligase *(RMA/MUSE)","protein_coding" "Sobic.006G225700.1","No alias","Sorghum bicolor ","chromatin remodeling factor *(Rad5) & chromatin remodeling factor *(Ris1)","protein_coding" "Sobic.008G172300.1","No alias","Sorghum bicolor ","component *(Pex2) of receptor polyubiquitination system","protein_coding" "Sobic.009G126300.1","No alias","Sorghum bicolor ","signal transducer of abscisic acid perception *(KEG) & EC_2.7 transferase transferring phosphorus-containing group","protein_coding" "Sobic.010G131900.1","No alias","Sorghum bicolor ","Unknown function","protein_coding" "Solyc01g067360","No alias","Solanum lycopersicum","CHY-type/CTCHY-type/RING-type Zinc finger protein (AHRD V3.3 *** AT5G18650.1)","protein_coding" "Solyc01g087030","No alias","Solanum lycopersicum","Zinc finger transcription factor 10","protein_coding" "Solyc01g098830","No alias","Solanum lycopersicum","RING/U-box superfamily protein (AHRD V3.3 *** AT3G05250.1)","protein_coding" "Solyc01g103980","No alias","Solanum lycopersicum","RING finger protein (AHRD V3.3 *** A0A0B0MBG4_GOSAR)","protein_coding" "Solyc02g050280","No alias","Solanum lycopersicum","SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein (AHRD V3.3 *** AT1G50410.4)","protein_coding" "Solyc02g069230","No alias","Solanum lycopersicum","RING/U-box superfamily protein (AHRD V3.3 *** AT4G19670.7)","protein_coding" "Solyc02g078320","No alias","Solanum lycopersicum","RING/U-box superfamily protein (AHRD V3.3 *-* AT1G19310.1)","protein_coding" "Solyc02g082110","No alias","Solanum lycopersicum","Zinc finger transcription factor 18","protein_coding" "Solyc02g094510","No alias","Solanum lycopersicum","RING finger protein (AHRD V3.3 *** G7KX94_MEDTR)","protein_coding" "Solyc03g120520","No alias","Solanum lycopersicum","Peroxisome biogenesis protein 2 (AHRD V3.3 *** A0A0B0MVT3_GOSAR)","protein_coding" "Solyc04g079780","No alias","Solanum lycopersicum","RING/U-box superfamily protein (AHRD V3.3 *** AT2G16090.1)","protein_coding" "Solyc05g044480","No alias","Solanum lycopersicum","RNA helicase DEAH-box16","protein_coding" "Solyc05g044510","No alias","Solanum lycopersicum","RNA helicase DEAH-box17","protein_coding" "Solyc05g044570","No alias","Solanum lycopersicum","LOW QUALITY:Helicase protein with RING/U-box domain-containing protein (AHRD V3.3 *-* AT1G05120.1)","protein_coding" "Solyc06g008210","No alias","Solanum lycopersicum","breast cancer associated RING 1 (AHRD V3.3 *** AT1G04020.1)","protein_coding" "Solyc06g054540","No alias","Solanum lycopersicum","CHY-type/CTCHY-type/RING-type Zinc finger protein (AHRD V3.3 *** AT5G18650.1)","protein_coding" "Solyc06g066570","No alias","Solanum lycopersicum","Peroxisome biogenesis protein 2 (AHRD V3.3 *** W9REG8_9ROSA)","protein_coding" "Solyc07g007610","No alias","Solanum lycopersicum","LOW QUALITY:RING/U-box superfamily protein, putative (AHRD V3.3 *** A0A061GPA7_THECC)","protein_coding" "Solyc07g052100","No alias","Solanum lycopersicum","SNF2 domain-containing protein (AHRD V3.3 *** D7KEB6_ARALL)","protein_coding" "Solyc07g054080","No alias","Solanum lycopersicum","RING/U-box superfamily protein (AHRD V3.3 *-* AT1G19310.1)","protein_coding" "Solyc07g063200","No alias","Solanum lycopersicum","RING/U-box superfamily protein (AHRD V3.3 *-* AT2G42030.1)","protein_coding" "Solyc10g006960","No alias","Solanum lycopersicum","RING/U-box superfamily protein (AHRD V3.3 *-* AT3G58030.4)","protein_coding" "Solyc10g008400","No alias","Solanum lycopersicum","RING/U-box superfamily protein (AHRD V3.3 *-* AT1G74990.1)","protein_coding" "Solyc10g008410","No alias","Solanum lycopersicum","RING/U-box superfamily protein (AHRD V3.3 *-* AT1G19310.1)","protein_coding" "Solyc10g049750","No alias","Solanum lycopersicum","Helicase protein with RING/U-box domain-containing protein (AHRD V3.3 *** AT1G05120.1)","protein_coding" "Solyc11g027810","No alias","Solanum lycopersicum","RING finger protein (AHRD V3.3 *** A0A0B0PUN2_GOSAR)","protein_coding" "Solyc12g010670","No alias","Solanum lycopersicum","RING/U-box superfamily protein (AHRD V3.3 *-* AT1G74990.1)","protein_coding" "Solyc12g013800","No alias","Solanum lycopersicum","RING/U-box superfamily protein (AHRD V3.3 *-* AT2G42030.1)","protein_coding" "Solyc12g020110","No alias","Solanum lycopersicum","SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein (AHRD V3.3 *** AT1G11100.1)","protein_coding" "Sopen00g008760","No alias","Solanum pennellii","Zinc finger, C3HC4 type (RING finger)","protein_coding" "Sopen01g015010","No alias","Solanum pennellii","Zinc finger, C3HC4 type (RING finger)","protein_coding" "Sopen01g034110","No alias","Solanum pennellii","Zinc finger C-x8-C-x5-C-x3-H type (and similar)","protein_coding" "Sopen01g042370","No alias","Solanum pennellii","Zinc finger, C3HC4 type (RING finger)","protein_coding" "Sopen01g046380","No alias","Solanum pennellii","Zinc finger, C3HC4 type (RING finger)","protein_coding" "Sopen02g018390","No alias","Solanum pennellii","IBR domain","protein_coding" "Sopen02g023160","No alias","Solanum pennellii","Zinc finger, C3HC4 type (RING finger)","protein_coding" "Sopen02g038400","No alias","Solanum pennellii","Zinc finger, C3HC4 type (RING finger)","protein_coding" "Sopen02g039190","No alias","Solanum pennellii","Zinc finger, C3HC4 type (RING finger)","protein_coding" "Sopen03g001490","No alias","Solanum pennellii","SNF2 family N-terminal domain","protein_coding" "Sopen04g033360","No alias","Solanum pennellii","IBR domain","protein_coding" "Sopen06g003070","No alias","Solanum pennellii","BRCA1 C Terminus (BRCT) domain","protein_coding" "Sopen06g019610","No alias","Solanum pennellii","Zinc-ribbon","protein_coding" "Sopen06g024840","No alias","Solanum pennellii","Pex2 / Pex12 amino terminal region","protein_coding" "Sopen07g003600","No alias","Solanum pennellii","Zinc finger, C3HC4 type (RING finger)","protein_coding" "Sopen07g025580","No alias","Solanum pennellii","SNF2 family N-terminal domain","protein_coding" "Sopen07g025730","No alias","Solanum pennellii","SNF2 family N-terminal domain","protein_coding" "Sopen07g028020","No alias","Solanum pennellii","Zinc finger, C3HC4 type (RING finger)","protein_coding" "Sopen07g031390","No alias","Solanum pennellii","Zinc finger, C3HC4 type (RING finger)","protein_coding" "Sopen10g002870","No alias","Solanum pennellii","Zinc finger, C3HC4 type (RING finger)","protein_coding" "Sopen10g004230","No alias","Solanum pennellii","Zinc finger, C3HC4 type (RING finger)","protein_coding" "Sopen12g005320","No alias","Solanum pennellii","Ring finger domain","protein_coding" "Sopen12g007110","No alias","Solanum pennellii","Zinc finger, C3HC4 type (RING finger)","protein_coding" "Sopen12g011610","No alias","Solanum pennellii","SNF2 family N-terminal domain","protein_coding" "Sopen12g020310","No alias","Solanum pennellii","Zinc finger, C3HC4 type (RING finger)","protein_coding"