"sequence_id","alias","species","description","type"
"177978","No alias","Selaginella moellendorffii ","PHD finger protein-related","protein_coding"
"438209","No alias","Selaginella moellendorffii ","proteolysis 6","protein_coding"
"79007","No alias","Selaginella moellendorffii ","proteolysis 6","protein_coding"
"A4A49_11358","No alias","Nicotiana attenuata","e3 ubiquitin-protein ligase prt6","protein_coding"
"A4A49_18537","No alias","Nicotiana attenuata","e3 ubiquitin-protein ligase prt6","protein_coding"
"A4A49_31142","No alias","Nicotiana attenuata","hypothetical protein","protein_coding"
"At4g23860","No alias","Arabidopsis thaliana","PHD finger protein-like protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SVJ2]","protein_coding"
"At5g02310","No alias","Arabidopsis thaliana","E3 ubiquitin-protein ligase PRT6 [Source:UniProtKB/Swiss-Prot;Acc:F4KCC2]","protein_coding"
"Bradi1g38700","No alias","Brachypodium distachyon","PHD finger protein-related","protein_coding"
"Bradi2g03180","No alias","Brachypodium distachyon","proteolysis 6","protein_coding"
"Brara.A01390.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.B00046.1","No alias","Brassica rapa","type-I-residues E3 ubiquitin ligase *(PRT6)","protein_coding"
"Brara.C00065.1","No alias","Brassica rapa","type-I-residues E3 ubiquitin ligase *(PRT6)","protein_coding"
"Brara.J02887.1","No alias","Brassica rapa","type-I-residues E3 ubiquitin ligase *(PRT6)","protein_coding"
"Cre02.g089237","No alias","Chlamydomonas reinhardtii","proteolysis 6","protein_coding"
"evm.model.contig_3503.1","No alias","Porphyridium purpureum","(at5g02310 : 104.0) Encodes PROTEOLYSIS6 (PRT6), a component of the N-end rule pathway that targets protein degradation through the identity of the amino-terminal residue of specific protein substrates. Another component of the N-end rule pathway is arginyl-tRNA:protein arginyltransferase (ATE).  Arabidopsis contains two ATE genes: At5g05700/ATE1, At3g11240/ATE2. PRT6 and ATE were shown to regulate seed after-ripening, seedling sugar sensitivity, seedling lipid breakdown, and abscisic acid (ABA) sensitivity of germination.; proteolysis 6 (PRT6); CONTAINS InterPro DOMAIN/s: Zinc finger, N-recognin,  metazoa (InterPro:IPR013993), Zinc finger, N-recognin (InterPro:IPR003126); Has 1893 Blast hits to 778 proteins in 199 species: Archae - 0; Bacteria - 0; Metazoa - 939; Fungi - 577; Plants - 100; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink). & (reliability: 208.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000158.22","No alias","Cyanophora paradoxa","(at3g02260 : 604.0) Calossin-like protein required for polar auxin transport; BIG (BIG); FUNCTIONS IN: ubiquitin-protein ligase activity, binding, zinc ion binding; INVOLVED IN: response to auxin stimulus, indeterminate inflorescence morphogenesis, photomorphogenesis, root development, auxin polar transport; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Zinc finger, N-recognin,  metazoa (InterPro:IPR013993), Armadillo-type fold (InterPro:IPR016024), Zinc finger, ZZ-type (InterPro:IPR000433), Zinc finger, N-recognin (InterPro:IPR003126); Has 1182 Blast hits to 997 proteins in 123 species: Archae - 0; Bacteria - 4; Metazoa - 768; Fungi - 44; Plants - 189; Viruses - 0; Other Eukaryotes - 177 (source: NCBI BLink). & (reliability: 1208.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001107.13","No alias","Cyanophora paradoxa","(at5g02310 : 113.0) Encodes PROTEOLYSIS6 (PRT6), a component of the N-end rule pathway that targets protein degradation through the identity of the amino-terminal residue of specific protein substrates. Another component of the N-end rule pathway is arginyl-tRNA:protein arginyltransferase (ATE).  Arabidopsis contains two ATE genes: At5g05700/ATE1, At3g11240/ATE2. PRT6 and ATE were shown to regulate seed after-ripening, seedling sugar sensitivity, seedling lipid breakdown, and abscisic acid (ABA) sensitivity of germination.; proteolysis 6 (PRT6); CONTAINS InterPro DOMAIN/s: Zinc finger, N-recognin,  metazoa (InterPro:IPR013993), Zinc finger, N-recognin (InterPro:IPR003126); Has 1893 Blast hits to 778 proteins in 199 species: Archae - 0; Bacteria - 0; Metazoa - 939; Fungi - 577; Plants - 100; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink). & (reliability: 226.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001127.20","No alias","Cyanophora paradoxa","(at4g23860 : 97.1) PHD finger protein-related; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, N-recognin (InterPro:IPR003126); Has 484 Blast hits to 449 proteins in 164 species: Archae - 0; Bacteria - 2; Metazoa - 240; Fungi - 124; Plants - 56; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (reliability: 194.2) &  (original description: no original description)","protein_coding"
"Glyma.01G225700","No alias","Glycine max","PHD finger protein-related","protein_coding"
"Glyma.07G132300","No alias","Glycine max","proteolysis 6","protein_coding"
"Glyma.11G017200","No alias","Glycine max","PHD finger protein-related","protein_coding"
"Glyma.18G181200","No alias","Glycine max","proteolysis 6","protein_coding"
"GRMZM2G129431","No alias","Zea mays","PHD finger protein-related","protein_coding"
"GRMZM2G438938","No alias","Zea mays","proteolysis 6","protein_coding"
"HORVU3Hr1G013090.2","No alias","Hordeum vulgare","type-I-residues E3 ubiquitin ligase *(PRT6)","protein_coding"
"HORVU3Hr1G013300.5","No alias","Hordeum vulgare","type-I-residues E3 ubiquitin ligase *(PRT6)","protein_coding"
"HORVU7Hr1G079450.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"Kfl00231_0090","kfl00231_0090_v1.1","Klebsormidium nitens","(at4g23860 : 240.0) PHD finger protein-related; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, N-recognin (InterPro:IPR003126); Has 484 Blast hits to 449 proteins in 164 species: Archae - 0; Bacteria - 2; Metazoa - 240; Fungi - 124; Plants - 56; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). & (reliability: 480.0) &  (original description: no original description)","protein_coding"
"Kfl00338_0040","kfl00338_0040_v1.1","Klebsormidium nitens","(at5g02310 : 216.0) Encodes PROTEOLYSIS6 (PRT6), a component of the N-end rule pathway that targets protein degradation through the identity of the amino-terminal residue of specific protein substrates. Another component of the N-end rule pathway is arginyl-tRNA:protein arginyltransferase (ATE).  Arabidopsis contains two ATE genes: At5g05700/ATE1, At3g11240/ATE2. PRT6 and ATE were shown to regulate seed after-ripening, seedling sugar sensitivity, seedling lipid breakdown, and abscisic acid (ABA) sensitivity of germination.; proteolysis 6 (PRT6); CONTAINS InterPro DOMAIN/s: Zinc finger, N-recognin,  metazoa (InterPro:IPR013993), Zinc finger, N-recognin (InterPro:IPR003126); Has 1893 Blast hits to 778 proteins in 199 species: Archae - 0; Bacteria - 0; Metazoa - 939; Fungi - 577; Plants - 100; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink). & (reliability: 432.0) &  (original description: no original description)","protein_coding"
"Kfl00364_0090","kfl00364_0090_v1.1","Klebsormidium nitens","(at5g02310 : 120.0) Encodes PROTEOLYSIS6 (PRT6), a component of the N-end rule pathway that targets protein degradation through the identity of the amino-terminal residue of specific protein substrates. Another component of the N-end rule pathway is arginyl-tRNA:protein arginyltransferase (ATE).  Arabidopsis contains two ATE genes: At5g05700/ATE1, At3g11240/ATE2. PRT6 and ATE were shown to regulate seed after-ripening, seedling sugar sensitivity, seedling lipid breakdown, and abscisic acid (ABA) sensitivity of germination.; proteolysis 6 (PRT6); CONTAINS InterPro DOMAIN/s: Zinc finger, N-recognin,  metazoa (InterPro:IPR013993), Zinc finger, N-recognin (InterPro:IPR003126); Has 1893 Blast hits to 778 proteins in 199 species: Archae - 0; Bacteria - 0; Metazoa - 939; Fungi - 577; Plants - 100; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink). & (reliability: 240.0) &  (original description: no original description)","protein_coding"
"LOC_Os01g05500","No alias","Oryza sativa","zinc finger protein, putative, expressed","protein_coding"
"LOC_Os06g33810","No alias","Oryza sativa","zinc finger protein, putative, expressed","protein_coding"
"Mp2g00960.1","No alias","Marchantia polymorpha","type-I-residues E3 ubiquitin ligase (PRT6)","protein_coding"
"Mp5g09100.1","No alias","Marchantia polymorpha","no hits & (original description: none)","protein_coding"
"Mp7g16320.1","No alias","Marchantia polymorpha","type-I-residues E3 ubiquitin ligase (PRT6)","protein_coding"
"Potri.001G091600","No alias","Populus trichocarpa","PHD finger protein-related","protein_coding"
"Potri.003G140000","No alias","Populus trichocarpa","PHD finger protein-related","protein_coding"
"Potri.006G085700","No alias","Populus trichocarpa","proteolysis 6","protein_coding"
"Pp1s193_34V6","No alias","Physcomitrella patens","ubiquitin ligase e3","protein_coding"
"Pp1s199_64V6","No alias","Physcomitrella patens","ubiquitin-protein ligase e3 component","protein_coding"
"Pp1s19_24V6","No alias","Physcomitrella patens","T32A16.30; PHD finger protein-related [Arabidopsis thaliana]","protein_coding"
"Pp1s207_67V6","No alias","Physcomitrella patens","phd finger","protein_coding"
"Pp1s22_146V6","No alias","Physcomitrella patens","ubiquitin protein ligase e3 component n-recognin 1","protein_coding"
"Pp1s2_175V6","No alias","Physcomitrella patens","ubiquitin ligase e3","protein_coding"
"Pp1s356_43V6","No alias","Physcomitrella patens","ubiquitin ligase e3","protein_coding"
"Pp1s35_178V6","No alias","Physcomitrella patens","ubr3 protein","protein_coding"
"Pp1s67_180V6","No alias","Physcomitrella patens","ubiquitin ligase e3","protein_coding"
"Pp1s83_5V6","No alias","Physcomitrella patens","ubiquitin ligase e3","protein_coding"
"Pp1s96_129V6","No alias","Physcomitrella patens","ubr3 protein","protein_coding"
"PSME_00008233-RA","No alias","Pseudotsuga menziesii","(at5g02310 : 427.0) Encodes PROTEOLYSIS6 (PRT6), a component of the N-end rule pathway that targets protein degradation through the identity of the amino-terminal residue of specific protein substrates. Another component of the N-end rule pathway is arginyl-tRNA:protein arginyltransferase (ATE).  Arabidopsis contains two ATE genes: At5g05700/ATE1, At3g11240/ATE2. PRT6 and ATE were shown to regulate seed after-ripening, seedling sugar sensitivity, seedling lipid breakdown, and abscisic acid (ABA) sensitivity of germination.; proteolysis 6 (PRT6); CONTAINS InterPro DOMAIN/s: Zinc finger, N-recognin,  metazoa (InterPro:IPR013993), Zinc finger, N-recognin (InterPro:IPR003126); Has 1893 Blast hits to 778 proteins in 199 species: Archae - 0; Bacteria - 0; Metazoa - 939; Fungi - 577; Plants - 100; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink). & (reliability: 854.0) &  (original description: no original description)","protein_coding"
"Seita.4G168700.1","No alias","Setaria italica ","Unknown function","protein_coding"
"Seita.5G102700.1","No alias","Setaria italica ","type-I-residues E3 ubiquitin ligase *(PRT6)","protein_coding"
"Sobic.003G072200.1","No alias","Sorghum bicolor ","type-I-residues E3 ubiquitin ligase *(PRT6)","protein_coding"
"Sobic.010G154000.1","No alias","Sorghum bicolor ","Unknown function","protein_coding"
"Solyc08g082320","No alias","Solanum lycopersicum","PHD finger family protein (AHRD V3.3 *** A9PBM1_POPTR)","protein_coding"
"Solyc09g010830","No alias","Solanum lycopersicum","E3 ubiquitin-protein ligase (AHRD V3.3 *** W9SG42_9ROSA)","protein_coding"
"Solyc10g084760","No alias","Solanum lycopersicum","E3 ubiquitin-protein ligase (AHRD V3.3 *** W9SG42_9ROSA)","protein_coding"
"Sopen08g030580","No alias","Solanum pennellii","Putative zinc finger in N-recognin (UBR box)","protein_coding"
"Sopen09g005560","No alias","Solanum pennellii","Putative zinc finger in N-recognin (UBR box)","protein_coding"