"sequence_id","alias","species","description","type"
"81861","No alias","Selaginella moellendorffii ","ferredoxin hydrogenases","protein_coding"
"A4A49_08066","No alias","Nicotiana attenuata","protein nar1","protein_coding"
"A4A49_55257","No alias","Nicotiana attenuata","protein nar1","protein_coding"
"A4A49_62146","No alias","Nicotiana attenuata","protein nar1","protein_coding"
"At4g16440","No alias","Arabidopsis thaliana","NAR1 [Source:UniProtKB/TrEMBL;Acc:A0A178V110]","protein_coding"
"Bradi1g08620","No alias","Brachypodium distachyon","ferredoxin hydrogenases","protein_coding"
"Brara.A01908.1","No alias","Brassica rapa","assembly factor NAR1 of cytosolic CIA system transfer phase","protein_coding"
"Cre03.g199800","No alias","Chlamydomonas reinhardtii","ferredoxin hydrogenases","protein_coding"
"Cre03.g200550","No alias","Chlamydomonas reinhardtii","ferredoxin hydrogenases","protein_coding"
"Cre09.g396600","No alias","Chlamydomonas reinhardtii","ferredoxin hydrogenases","protein_coding"
"evm.model.contig_2663.1","No alias","Porphyridium purpureum","(at4g16440 : 162.0) Encodes a [FeFe]-hydrogenase-like protein named Gollum (for Growth in different Oxygen LeveLs inflUences Morphogenesis).  Heterologous expression of Gollum in E. coli indicates that it probably contains two [Fe-S] clusters with different magnetic properties. Sequence alignment analysis indicates that these two clusters would be topologically equivalent to the mesial and proximal [Fe-S] centers of [FeFe]-hydrogenases. Knockdown mutants (RNAi) show a dwarf phenotype at the normal atmospheric partial oxygen pressure of 21 kPa.  This dwarf phenotype could be rescued by growing the plant under low oxygen pressure (5kPa), suggesting a role for this gene in oxygen sensing.; ferredoxin hydrogenases; CONTAINS InterPro DOMAIN/s: Iron hydrogenase, large subunit, C-terminal (InterPro:IPR004108), Iron hydrogenase (InterPro:IPR009016), Iron hydrogenase, small subunit-like (InterPro:IPR003149); Has 2574 Blast hits to 2544 proteins in 612 species: Archae - 1; Bacteria - 1826; Metazoa - 221; Fungi - 188; Plants - 72; Viruses - 0; Other Eukaryotes - 266 (source: NCBI BLink). & (q43644|ndus1_soltu : 117.0) NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-75kD) (CI-75kD) (76 kDa mitochondrial complex I subunit) - Solanum tuberosum (Potato) & (reliability: 324.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000076.99","No alias","Cyanophora paradoxa","(at4g16440 : 308.0) Encodes a [FeFe]-hydrogenase-like protein named Gollum (for Growth in different Oxygen LeveLs inflUences Morphogenesis).  Heterologous expression of Gollum in E. coli indicates that it probably contains two [Fe-S] clusters with different magnetic properties. Sequence alignment analysis indicates that these two clusters would be topologically equivalent to the mesial and proximal [Fe-S] centers of [FeFe]-hydrogenases. Knockdown mutants (RNAi) show a dwarf phenotype at the normal atmospheric partial oxygen pressure of 21 kPa.  This dwarf phenotype could be rescued by growing the plant under low oxygen pressure (5kPa), suggesting a role for this gene in oxygen sensing.; ferredoxin hydrogenases; CONTAINS InterPro DOMAIN/s: Iron hydrogenase, large subunit, C-terminal (InterPro:IPR004108), Iron hydrogenase (InterPro:IPR009016), Iron hydrogenase, small subunit-like (InterPro:IPR003149); Has 2574 Blast hits to 2544 proteins in 612 species: Archae - 1; Bacteria - 1826; Metazoa - 221; Fungi - 188; Plants - 72; Viruses - 0; Other Eukaryotes - 266 (source: NCBI BLink). & (reliability: 616.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000093.242","No alias","Cyanophora paradoxa","(at4g16440 : 125.0) Encodes a [FeFe]-hydrogenase-like protein named Gollum (for Growth in different Oxygen LeveLs inflUences Morphogenesis).  Heterologous expression of Gollum in E. coli indicates that it probably contains two [Fe-S] clusters with different magnetic properties. Sequence alignment analysis indicates that these two clusters would be topologically equivalent to the mesial and proximal [Fe-S] centers of [FeFe]-hydrogenases. Knockdown mutants (RNAi) show a dwarf phenotype at the normal atmospheric partial oxygen pressure of 21 kPa.  This dwarf phenotype could be rescued by growing the plant under low oxygen pressure (5kPa), suggesting a role for this gene in oxygen sensing.; ferredoxin hydrogenases; CONTAINS InterPro DOMAIN/s: Iron hydrogenase, large subunit, C-terminal (InterPro:IPR004108), Iron hydrogenase (InterPro:IPR009016), Iron hydrogenase, small subunit-like (InterPro:IPR003149); Has 2574 Blast hits to 2544 proteins in 612 species: Archae - 1; Bacteria - 1826; Metazoa - 221; Fungi - 188; Plants - 72; Viruses - 0; Other Eukaryotes - 266 (source: NCBI BLink). & (reliability: 250.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000093.243","No alias","Cyanophora paradoxa","(at4g16440 : 120.0) Encodes a [FeFe]-hydrogenase-like protein named Gollum (for Growth in different Oxygen LeveLs inflUences Morphogenesis).  Heterologous expression of Gollum in E. coli indicates that it probably contains two [Fe-S] clusters with different magnetic properties. Sequence alignment analysis indicates that these two clusters would be topologically equivalent to the mesial and proximal [Fe-S] centers of [FeFe]-hydrogenases. Knockdown mutants (RNAi) show a dwarf phenotype at the normal atmospheric partial oxygen pressure of 21 kPa.  This dwarf phenotype could be rescued by growing the plant under low oxygen pressure (5kPa), suggesting a role for this gene in oxygen sensing.; ferredoxin hydrogenases; CONTAINS InterPro DOMAIN/s: Iron hydrogenase, large subunit, C-terminal (InterPro:IPR004108), Iron hydrogenase (InterPro:IPR009016), Iron hydrogenase, small subunit-like (InterPro:IPR003149); Has 2574 Blast hits to 2544 proteins in 612 species: Archae - 1; Bacteria - 1826; Metazoa - 221; Fungi - 188; Plants - 72; Viruses - 0; Other Eukaryotes - 266 (source: NCBI BLink). & (reliability: 240.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001095.15","No alias","Cyanophora paradoxa","(at3g02280 : 234.0) Flavodoxin family protein; FUNCTIONS IN: oxidoreductase activity, FMN binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), FAD-binding, type 1 (InterPro:IPR003097), Flavodoxin/nitric oxide synthase (InterPro:IPR008254), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709); BEST Arabidopsis thaliana protein match is: P450 reductase 1 (TAIR:AT4G24520.1); Has 7053 Blast hits to 6598 proteins in 1587 species: Archae - 9; Bacteria - 3832; Metazoa - 1042; Fungi - 865; Plants - 492; Viruses - 0; Other Eukaryotes - 813 (source: NCBI BLink). & (q05001|ncpr_catro : 211.0) NADPH--cytochrome P450 reductase (EC 1.6.2.4) (CPR) (P450R) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 468.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00020995.14","No alias","Cyanophora paradoxa","(at3g02280 : 202.0) Flavodoxin family protein; FUNCTIONS IN: oxidoreductase activity, FMN binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), FAD-binding, type 1 (InterPro:IPR003097), Flavodoxin/nitric oxide synthase (InterPro:IPR008254), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709); BEST Arabidopsis thaliana protein match is: P450 reductase 1 (TAIR:AT4G24520.1); Has 7053 Blast hits to 6598 proteins in 1587 species: Archae - 9; Bacteria - 3832; Metazoa - 1042; Fungi - 865; Plants - 492; Viruses - 0; Other Eukaryotes - 813 (source: NCBI BLink). & (q05001|ncpr_catro : 180.0) NADPH--cytochrome P450 reductase (EC 1.6.2.4) (CPR) (P450R) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 404.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021537.61","No alias","Cyanophora paradoxa","(at4g16440 : 81.3) Encodes a [FeFe]-hydrogenase-like protein named Gollum (for Growth in different Oxygen LeveLs inflUences Morphogenesis).  Heterologous expression of Gollum in E. coli indicates that it probably contains two [Fe-S] clusters with different magnetic properties. Sequence alignment analysis indicates that these two clusters would be topologically equivalent to the mesial and proximal [Fe-S] centers of [FeFe]-hydrogenases. Knockdown mutants (RNAi) show a dwarf phenotype at the normal atmospheric partial oxygen pressure of 21 kPa.  This dwarf phenotype could be rescued by growing the plant under low oxygen pressure (5kPa), suggesting a role for this gene in oxygen sensing.; ferredoxin hydrogenases; CONTAINS InterPro DOMAIN/s: Iron hydrogenase, large subunit, C-terminal (InterPro:IPR004108), Iron hydrogenase (InterPro:IPR009016), Iron hydrogenase, small subunit-like (InterPro:IPR003149); Has 2574 Blast hits to 2544 proteins in 612 species: Archae - 1; Bacteria - 1826; Metazoa - 221; Fungi - 188; Plants - 72; Viruses - 0; Other Eukaryotes - 266 (source: NCBI BLink). & (reliability: 162.6) &  (original description: no original description)","protein_coding"
"evm.model.tig00021537.64","No alias","Cyanophora paradoxa","(at4g24520 : 84.7) Encodes a cyp450 reductase likely to be involved in phenylpropanoid metabolism.; P450 reductase 1 (ATR1); CONTAINS InterPro DOMAIN/s: Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), FAD-binding, type 1 (InterPro:IPR003097), Flavodoxin/nitric oxide synthase (InterPro:IPR008254), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), NADPH Cytochrome P450 Reductase (InterPro:IPR015702); BEST Arabidopsis thaliana protein match is: P450 reductase 2 (TAIR:AT4G30210.2). & (reliability: 169.4) &  (original description: no original description)","protein_coding"
"Glyma.07G266900","No alias","Glycine max","ferredoxin hydrogenases","protein_coding"
"Glyma.17G007300","No alias","Glycine max","ferredoxin hydrogenases","protein_coding"
"GRMZM2G010052","No alias","Zea mays","ferredoxin hydrogenases","protein_coding"
"GRMZM2G171998","No alias","Zea mays","ferredoxin hydrogenases","protein_coding"
"HORVU5Hr1G094840.2","No alias","Hordeum vulgare","assembly factor NAR1 of cytosolic CIA system transfer phase","protein_coding"
"Kfl00661_0060","kfl00661_0060_v1.1","Klebsormidium nitens","(at4g16440 : 554.0) Encodes a [FeFe]-hydrogenase-like protein named Gollum (for Growth in different Oxygen LeveLs inflUences Morphogenesis).  Heterologous expression of Gollum in E. coli indicates that it probably contains two [Fe-S] clusters with different magnetic properties. Sequence alignment analysis indicates that these two clusters would be topologically equivalent to the mesial and proximal [Fe-S] centers of [FeFe]-hydrogenases. Knockdown mutants (RNAi) show a dwarf phenotype at the normal atmospheric partial oxygen pressure of 21 kPa.  This dwarf phenotype could be rescued by growing the plant under low oxygen pressure (5kPa), suggesting a role for this gene in oxygen sensing.; ferredoxin hydrogenases; CONTAINS InterPro DOMAIN/s: Iron hydrogenase, large subunit, C-terminal (InterPro:IPR004108), Iron hydrogenase (InterPro:IPR009016), Iron hydrogenase, small subunit-like (InterPro:IPR003149); Has 2574 Blast hits to 2544 proteins in 612 species: Archae - 1; Bacteria - 1826; Metazoa - 221; Fungi - 188; Plants - 72; Viruses - 0; Other Eukaryotes - 266 (source: NCBI BLink). & (reliability: 1108.0) &  (original description: no original description)","protein_coding"
"LOC_Os03g53750","No alias","Oryza sativa","nuclear prelamin A recognition factor, putative, expressed","protein_coding"
"Mp4g23030.1","No alias","Marchantia polymorpha","assembly factor NAR1 of cytosolic CIA system transfer phase","protein_coding"
"Potri.006G017000","No alias","Populus trichocarpa","ferredoxin hydrogenases","protein_coding"
"Potri.016G008100","No alias","Populus trichocarpa","ferredoxin hydrogenases","protein_coding"
"Potri.016G008700","No alias","Populus trichocarpa","ferredoxin hydrogenases","protein_coding"
"Pp1s240_88V6","No alias","Physcomitrella patens","nuclear prelamin a recognition factor-like","protein_coding"
"Seita.9G092200.1","No alias","Setaria italica ","assembly factor NAR1 of cytosolic CIA system transfer phase","protein_coding"
"Sobic.001G089800.1","No alias","Sorghum bicolor ","assembly factor NAR1 of cytosolic CIA system transfer phase","protein_coding"
"Solyc08g065990","No alias","Solanum lycopersicum","cytosolic Fe-S cluster assembly factor nar1","protein_coding"
"Sopen08g019660","No alias","Solanum pennellii","Iron only hydrogenase large subunit, C-terminal domain","protein_coding"