"sequence_id","alias","species","description","type"
"139726","No alias","Selaginella moellendorffii ","FtsH extracellular protease family","protein_coding"
"149856","No alias","Selaginella moellendorffii ","FtsH extracellular protease family","protein_coding"
"152929","No alias","Selaginella moellendorffii ","FtsH extracellular protease family","protein_coding"
"164653","No alias","Selaginella moellendorffii ","FTSH protease 11","protein_coding"
"166773","No alias","Selaginella moellendorffii ","AAA-type ATPase family protein","protein_coding"
"167789","No alias","Selaginella moellendorffii ","FTSH protease 9","protein_coding"
"169256","No alias","Selaginella moellendorffii ","FTSH protease 10","protein_coding"
"172575","No alias","Selaginella moellendorffii ","FTSH protease 4","protein_coding"
"233533","No alias","Selaginella moellendorffii ","FTSH protease 10","protein_coding"
"81522","No alias","Selaginella moellendorffii ","FTSH protease 12","protein_coding"
"98591","No alias","Selaginella moellendorffii ","FtsH extracellular protease family","protein_coding"
"A4A49_06091","No alias","Nicotiana attenuata","atp-dependent zinc metalloprotease ftsh 4, mitochondrial","protein_coding"
"A4A49_06555","No alias","Nicotiana attenuata","atp-dependent zinc metalloprotease ftsh 8, mitochondrial","protein_coding"
"A4A49_06556","No alias","Nicotiana attenuata","atp-dependent zinc metalloprotease ftsh 8, mitochondrial","protein_coding"
"A4A49_07335","No alias","Nicotiana attenuata","atp-dependent zinc metalloprotease ftsh, chloroplastic","protein_coding"
"A4A49_07748","No alias","Nicotiana attenuata","atp-dependent zinc metalloprotease ftsh 11, chloroplasticmitochondrial","protein_coding"
"A4A49_08225","No alias","Nicotiana attenuata","atp-dependent zinc metalloprotease ftsh 6, chloroplastic","protein_coding"
"A4A49_10528","No alias","Nicotiana attenuata","atp-dependent zinc metalloprotease ftsh, chloroplastic","protein_coding"
"A4A49_17749","No alias","Nicotiana attenuata","atp-dependent zinc metalloprotease ftsh 10, mitochondrial","protein_coding"
"A4A49_18240","No alias","Nicotiana attenuata","atp-dependent zinc metalloprotease ftsh 12, chloroplastic","protein_coding"
"A4A49_23822","No alias","Nicotiana attenuata","atp-dependent zinc metalloprotease ftsh 4, mitochondrial","protein_coding"
"A4A49_27407","No alias","Nicotiana attenuata","putative inactive atp-dependent zinc metalloprotease ftshi 5, chloroplastic","protein_coding"
"A4A49_29272","No alias","Nicotiana attenuata","putative inactive atp-dependent zinc metalloprotease ftshi 1, chloroplastic","protein_coding"
"A4A49_38491","No alias","Nicotiana attenuata","atp-dependent zinc metalloprotease ftsh 9, chloroplastic","protein_coding"
"A4A49_38669","No alias","Nicotiana attenuata","putative inactive atp-dependent zinc metalloprotease ftshi 2, chloroplastic","protein_coding"
"A4A49_41435","No alias","Nicotiana attenuata","atp-dependent zinc metalloprotease ftsh 2, chloroplastic","protein_coding"
"AC216219.3_FG006","No alias","Zea mays","FTSH protease 6","protein_coding"
"At1g06430","No alias","Arabidopsis thaliana","ATP-dependent zinc metalloprotease FTSH 8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8W585]","protein_coding"
"At1g07510","No alias","Arabidopsis thaliana","ATP-dependent zinc metalloprotease FTSH 10, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8VZI8]","protein_coding"
"At1g50250","No alias","Arabidopsis thaliana","ATP-dependent zinc metalloprotease FTSH 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q39102]","protein_coding"
"At1g79560","No alias","Arabidopsis thaliana","AT1G79560 protein [Source:UniProtKB/TrEMBL;Acc:B9DHQ6]","protein_coding"
"At2g26140","No alias","Arabidopsis thaliana","ATP-dependent zinc metalloprotease FTSH 4, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O80983]","protein_coding"
"At2g29080","No alias","Arabidopsis thaliana","ATP-dependent zinc metalloprotease FTSH 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q84WU8]","protein_coding"
"At2g30950","No alias","Arabidopsis thaliana","FtsH extracellular protease family [Source:TAIR;Acc:AT2G30950]","protein_coding"
"At3g04340","No alias","Arabidopsis thaliana","Probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4J3N2]","protein_coding"
"At3g16290","No alias","Arabidopsis thaliana","Probable inactive ATP-dependent zinc metalloprotease FTSHI 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:A8MPR5]","protein_coding"
"At3g47060","No alias","Arabidopsis thaliana","ATP-dependent zinc metalloprotease FTSH 7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SD67]","protein_coding"
"At4g23940","No alias","Arabidopsis thaliana","Probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O22993]","protein_coding"
"At5g15250","No alias","Arabidopsis thaliana","ATP-dependent zinc metalloprotease FTSH 6, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q1PDW5]","protein_coding"
"At5g42270","No alias","Arabidopsis thaliana","VAR1 [Source:UniProtKB/TrEMBL;Acc:A0A178U8J6]","protein_coding"
"At5g53170","No alias","Arabidopsis thaliana","ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FGM0]","protein_coding"
"At5g58870","No alias","Arabidopsis thaliana","Ftsh9 [Source:UniProtKB/TrEMBL;Acc:A0A178UAY0]","protein_coding"
"Bradi1g02240","No alias","Brachypodium distachyon","FTSH protease 4","protein_coding"
"Bradi1g29900","No alias","Brachypodium distachyon","FtsH extracellular protease family","protein_coding"
"Bradi1g32310","No alias","Brachypodium distachyon","FtsH extracellular protease family","protein_coding"
"Bradi1g45160","No alias","Brachypodium distachyon","FTSH protease 6","protein_coding"
"Bradi2g14330","No alias","Brachypodium distachyon","FTSH protease 4","protein_coding"
"Bradi2g23357","No alias","Brachypodium distachyon","FTSH protease 10","protein_coding"
"Bradi2g41610","No alias","Brachypodium distachyon","FTSH protease 4","protein_coding"
"Bradi2g43740","No alias","Brachypodium distachyon","FTSH protease 11","protein_coding"
"Bradi2g54697","No alias","Brachypodium distachyon","FTSH protease 3","protein_coding"
"Bradi3g50240","No alias","Brachypodium distachyon","FTSH protease 7","protein_coding"
"Brara.A01399.1","No alias","Brassica rapa","component *(FtsHi) of protein translocation ATPase motor complex","protein_coding"
"Brara.B01469.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.D01584.1","No alias","Brassica rapa","ATP-dependent metalloprotease *(FtsH4/11)","protein_coding"
"Brara.D01742.1","No alias","Brassica rapa","component *(Fts3/10) of FtsH3/10 matrix-AAA protease heterodimers","protein_coding"
"Brara.E01263.1","No alias","Brassica rapa","protease *(FtsH2/8) & EXECUTER-cleavage protease *(FtsH2) & component *(FtsH1/2/5/6/8) of FtsH plastidial protease complexes","protein_coding"
"Brara.E02526.1","No alias","Brassica rapa","component *(FtsHi) of protein translocation ATPase motor complex","protein_coding"
"Brara.E03454.1","No alias","Brassica rapa","component *(FtsHi) of protein translocation ATPase motor complex","protein_coding"
"Brara.F01773.1","No alias","Brassica rapa","component *(FtsH7/9) of FtsH plastidial protease complexes","protein_coding"
"Brara.G01418.1","No alias","Brassica rapa","component *(Fts3/10) of FtsH3/10 matrix-AAA protease heterodimers","protein_coding"
"Brara.G02074.1","No alias","Brassica rapa","component *(FtsH12) of protein translocation ATPase motor complex","protein_coding"
"Brara.G02728.1","No alias","Brassica rapa","protease *(FtsH1/5) & component *(FtsH1/2/5/6/8) of FtsH plastidial protease complexes","protein_coding"
"Brara.H02960.1","No alias","Brassica rapa","protease *(FtsH2/8) & EXECUTER-cleavage protease *(FtsH2) & component *(FtsH1/2/5/6/8) of FtsH plastidial protease complexes","protein_coding"
"Brara.I04403.1","No alias","Brassica rapa","ATP-dependent metalloprotease *(FtsH4/11)","protein_coding"
"Brara.I05355.1","No alias","Brassica rapa","component *(Fts3/10) of FtsH3/10 matrix-AAA protease heterodimers","protein_coding"
"Brara.J00441.1","No alias","Brassica rapa","protease *(FtsH2/8) & EXECUTER-cleavage protease *(FtsH2) & component *(FtsH1/2/5/6/8) of FtsH plastidial protease complexes","protein_coding"
"Brara.J00825.1","No alias","Brassica rapa","Unknown function","protein_coding"
"Brara.J01267.1","No alias","Brassica rapa","component *(FtsH7/9) of FtsH plastidial protease complexes","protein_coding"
"Brara.J01968.1","No alias","Brassica rapa","protease *(FtsH2/8) & EXECUTER-cleavage protease *(FtsH2) & component *(FtsH1/2/5/6/8) of FtsH plastidial protease complexes","protein_coding"
"Cre01.g019850","No alias","Chlamydomonas reinhardtii","FTSH protease 10","protein_coding"
"Cre02.g078966","No alias","Chlamydomonas reinhardtii","FTSH protease 7","protein_coding"
"Cre07.g352350","No alias","Chlamydomonas reinhardtii","FTSH protease 1","protein_coding"
"Cre12.g485800","No alias","Chlamydomonas reinhardtii","FtsH extracellular protease family","protein_coding"
"Cre13.g568400","No alias","Chlamydomonas reinhardtii","FTSH protease 4","protein_coding"
"Cre14.g625625","No alias","Chlamydomonas reinhardtii","FTSH protease 11","protein_coding"
"Cre17.g720050","No alias","Chlamydomonas reinhardtii","FtsH extracellular protease family","protein_coding"
"Cre17.g739752","No alias","Chlamydomonas reinhardtii","FtsH extracellular protease family","protein_coding"
"evm.model.contig_2059.27","No alias","Porphyridium purpureum","(at2g29080 : 620.0) encodes an FtsH protease that is localized to the mitochondrion; FTSH protease 3 (ftsh3); FUNCTIONS IN: ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: proteolysis, protein catabolic process; LOCATED IN: mitochondrion, chloroplast thylakoid membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FTSH protease 10 (TAIR:AT1G07510.1); Has 42068 Blast hits to 39734 proteins in 3332 species: Archae - 1581; Bacteria - 17420; Metazoa - 4814; Fungi - 3774; Plants - 3280; Viruses - 30; Other Eukaryotes - 11169 (source: NCBI BLink). & (q5z974|ftsh_orysa : 422.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Oryza sativa (Rice) & (reliability: 1216.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_4437.1","No alias","Porphyridium purpureum","(at1g07510 : 528.0) encodes an FtsH protease that is localized to the mitochondrion; FTSH protease 10 (ftsh10); FUNCTIONS IN: in 6 functions; INVOLVED IN: proteolysis, protein catabolic process; LOCATED IN: mitochondrion, chloroplast thylakoid membrane, plastid; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FTSH protease 3 (TAIR:AT2G29080.1); Has 37747 Blast hits to 35440 proteins in 3262 species: Archae - 1533; Bacteria - 14237; Metazoa - 4767; Fungi - 3643; Plants - 3223; Viruses - 27; Other Eukaryotes - 10317 (source: NCBI BLink). & (q5z974|ftsh_orysa : 388.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Oryza sativa (Rice) & (gnl|cdd|68872 : 100.0) no description available & (reliability: 1056.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_503.12","No alias","Porphyridium purpureum","(at1g50250 : 579.0) encodes an FTSH protease that is localized to the chloroplast. Involved in the D1 repair cycle of Photosystem II. FtsH1 and FtsH5 are interchangeable in thylakoid membranes.; FTSH protease 1 (FTSH1); FUNCTIONS IN: metallopeptidase activity, protein binding, ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: photosystem II repair, PSII associated light-harvesting complex II catabolic process; LOCATED IN: thylakoid lumen, chloroplast thylakoid membrane, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642); BEST Arabidopsis thaliana protein match is: FtsH extracellular protease family (TAIR:AT5G42270.1); Has 39789 Blast hits to 37355 proteins in 3308 species: Archae - 1512; Bacteria - 16133; Metazoa - 4957; Fungi - 3666; Plants - 3305; Viruses - 34; Other Eukaryotes - 10182 (source: NCBI BLink). & (q5z974|ftsh_orysa : 578.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Oryza sativa (Rice) & (reliability: 1158.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_522.1","No alias","Porphyridium purpureum","(q9bae0|ftsh_medsa : 654.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Medicago sativa (Alfalfa) & (at5g42270 : 652.0) VAR1 contains a conserved motif for ATPase and a metalloprotease characteristic to FtsH proteins, and is targeted into chloroplasts. A VAR1-fusion protein synthesized in vitro exhibited ATPase activity and partial metalloprotease activity. This protein is located to the thylakoid membrane and forms a complex with VAR2. FtsH1 (VAR1) and FtsH5 are interchangeable in thylakoid membranes.; VARIEGATED 1 (VAR1); FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: photoinhibition, PSII associated light-harvesting complex II catabolic process, protein catabolic process; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642); BEST Arabidopsis thaliana protein match is: FTSH protease 1 (TAIR:AT1G50250.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1304.0) &  (original description: no original description)","protein_coding"
"evm.model.contig_547.1","No alias","Porphyridium purpureum","(at2g26140 : 618.0) encodes an FtsH protease that is localized to the mitochondrion; FTSH protease 4 (ftsh4); FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: proteolysis, protein catabolic process; LOCATED IN: mitochondrion, plastid, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase S16, Lon protease, C-terminal (InterPro:IPR001984); BEST Arabidopsis thaliana protein match is: FTSH protease 11 (TAIR:AT5G53170.1); Has 39775 Blast hits to 37259 proteins in 3240 species: Archae - 1584; Bacteria - 15744; Metazoa - 5149; Fungi - 3764; Plants - 3335; Viruses - 40; Other Eukaryotes - 10159 (source: NCBI BLink). & (q5z974|ftsh_orysa : 375.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Oryza sativa (Rice) & (reliability: 1236.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00000704.23","No alias","Cyanophora paradoxa","(at1g50250 : 325.0) encodes an FTSH protease that is localized to the chloroplast. Involved in the D1 repair cycle of Photosystem II. FtsH1 and FtsH5 are interchangeable in thylakoid membranes.; FTSH protease 1 (FTSH1); FUNCTIONS IN: metallopeptidase activity, protein binding, ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: photosystem II repair, PSII associated light-harvesting complex II catabolic process; LOCATED IN: thylakoid lumen, chloroplast thylakoid membrane, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642); BEST Arabidopsis thaliana protein match is: FtsH extracellular protease family (TAIR:AT5G42270.1); Has 39789 Blast hits to 37355 proteins in 3308 species: Archae - 1512; Bacteria - 16133; Metazoa - 4957; Fungi - 3666; Plants - 3305; Viruses - 34; Other Eukaryotes - 10182 (source: NCBI BLink). & (q9bae0|ftsh_medsa : 323.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Medicago sativa (Alfalfa) & (reliability: 650.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00001600.9","No alias","Cyanophora paradoxa","(at2g26140 : 570.0) encodes an FtsH protease that is localized to the mitochondrion; FTSH protease 4 (ftsh4); FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: proteolysis, protein catabolic process; LOCATED IN: mitochondrion, plastid, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase S16, Lon protease, C-terminal (InterPro:IPR001984); BEST Arabidopsis thaliana protein match is: FTSH protease 11 (TAIR:AT5G53170.1); Has 39775 Blast hits to 37259 proteins in 3240 species: Archae - 1584; Bacteria - 15744; Metazoa - 5149; Fungi - 3764; Plants - 3335; Viruses - 40; Other Eukaryotes - 10159 (source: NCBI BLink). & (q5z974|ftsh_orysa : 374.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Oryza sativa (Rice) & (reliability: 1140.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021127.121","No alias","Cyanophora paradoxa","(at5g42270 : 463.0) VAR1 contains a conserved motif for ATPase and a metalloprotease characteristic to FtsH proteins, and is targeted into chloroplasts. A VAR1-fusion protein synthesized in vitro exhibited ATPase activity and partial metalloprotease activity. This protein is located to the thylakoid membrane and forms a complex with VAR2. FtsH1 (VAR1) and FtsH5 are interchangeable in thylakoid membranes.; VARIEGATED 1 (VAR1); FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: photoinhibition, PSII associated light-harvesting complex II catabolic process, protein catabolic process; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642); BEST Arabidopsis thaliana protein match is: FTSH protease 1 (TAIR:AT1G50250.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q9bae0|ftsh_medsa : 462.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Medicago sativa (Alfalfa) & (reliability: 926.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021127.122","No alias","Cyanophora paradoxa","(at5g42270 : 108.0) VAR1 contains a conserved motif for ATPase and a metalloprotease characteristic to FtsH proteins, and is targeted into chloroplasts. A VAR1-fusion protein synthesized in vitro exhibited ATPase activity and partial metalloprotease activity. This protein is located to the thylakoid membrane and forms a complex with VAR2. FtsH1 (VAR1) and FtsH5 are interchangeable in thylakoid membranes.; VARIEGATED 1 (VAR1); FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: photoinhibition, PSII associated light-harvesting complex II catabolic process, protein catabolic process; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642); BEST Arabidopsis thaliana protein match is: FTSH protease 1 (TAIR:AT1G50250.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q5z974|ftsh_orysa : 106.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Oryza sativa (Rice) & (reliability: 216.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021275.24","No alias","Cyanophora paradoxa","(at5g42270 : 189.0) VAR1 contains a conserved motif for ATPase and a metalloprotease characteristic to FtsH proteins, and is targeted into chloroplasts. A VAR1-fusion protein synthesized in vitro exhibited ATPase activity and partial metalloprotease activity. This protein is located to the thylakoid membrane and forms a complex with VAR2. FtsH1 (VAR1) and FtsH5 are interchangeable in thylakoid membranes.; VARIEGATED 1 (VAR1); FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: photoinhibition, PSII associated light-harvesting complex II catabolic process, protein catabolic process; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642); BEST Arabidopsis thaliana protein match is: FTSH protease 1 (TAIR:AT1G50250.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q5z974|ftsh_orysa : 187.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Oryza sativa (Rice) & (reliability: 378.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00021428.9","No alias","Cyanophora paradoxa","(at2g29080 : 366.0) encodes an FtsH protease that is localized to the mitochondrion; FTSH protease 3 (ftsh3); FUNCTIONS IN: ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: proteolysis, protein catabolic process; LOCATED IN: mitochondrion, chloroplast thylakoid membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FTSH protease 10 (TAIR:AT1G07510.1); Has 42068 Blast hits to 39734 proteins in 3332 species: Archae - 1581; Bacteria - 17420; Metazoa - 4814; Fungi - 3774; Plants - 3280; Viruses - 30; Other Eukaryotes - 11169 (source: NCBI BLink). & (q9bae0|ftsh_medsa : 218.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Medicago sativa (Alfalfa) & (reliability: 720.0) &  (original description: no original description)","protein_coding"
"evm.model.tig00022075.42","No alias","Cyanophora paradoxa","(o82150|ftsh_tobac : 339.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) (DS9) - Nicotiana tabacum (Common tobacco) & (at1g50250 : 338.0) encodes an FTSH protease that is localized to the chloroplast. Involved in the D1 repair cycle of Photosystem II. FtsH1 and FtsH5 are interchangeable in thylakoid membranes.; FTSH protease 1 (FTSH1); FUNCTIONS IN: metallopeptidase activity, protein binding, ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: photosystem II repair, PSII associated light-harvesting complex II catabolic process; LOCATED IN: thylakoid lumen, chloroplast thylakoid membrane, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642); BEST Arabidopsis thaliana protein match is: FtsH extracellular protease family (TAIR:AT5G42270.1); Has 39789 Blast hits to 37355 proteins in 3308 species: Archae - 1512; Bacteria - 16133; Metazoa - 4957; Fungi - 3666; Plants - 3305; Viruses - 34; Other Eukaryotes - 10182 (source: NCBI BLink). & (reliability: 676.0) &  (original description: no original description)","protein_coding"
"Glyma.02G225300","No alias","Glycine max","FTSH protease 9","protein_coding"
"Glyma.04G019100","No alias","Glycine max","FtsH extracellular protease family","protein_coding"
"Glyma.04G051700","No alias","Glycine max","FTSH protease 4","protein_coding"
"Glyma.05G132000","No alias","Glycine max","FtsH extracellular protease family","protein_coding"
"Glyma.06G019400","No alias","Glycine max","FtsH extracellular protease family","protein_coding"
"Glyma.06G126000","No alias","Glycine max","FTSH protease 11","protein_coding"
"Glyma.08G023900","No alias","Glycine max","FtsH extracellular protease family","protein_coding"
"Glyma.08G086600","No alias","Glycine max","FtsH extracellular protease family","protein_coding"
"Glyma.08G237500","No alias","Glycine max","FTSH protease 12","protein_coding"
"Glyma.09G052600","No alias","Glycine max","FTSH protease 8","protein_coding"
"Glyma.10G164800","No alias","Glycine max","FtsH extracellular protease family","protein_coding"
"Glyma.11G137700","No alias","Glycine max","FTSH protease 10","protein_coding"
"Glyma.12G061200","No alias","Glycine max","FTSH protease 10","protein_coding"
"Glyma.12G061400","No alias","Glycine max","FTSH protease 10","protein_coding"
"Glyma.13G041700","No alias","Glycine max","FTSH protease 11","protein_coding"
"Glyma.13G355400","No alias","Glycine max","AAA-type ATPase family protein","protein_coding"
"Glyma.14G096000","No alias","Glycine max","FTSH protease 4","protein_coding"
"Glyma.14G096100","No alias","Glycine max","FTSH protease 4","protein_coding"
"Glyma.14G124900","No alias","Glycine max","FTSH protease 11","protein_coding"
"Glyma.14G192100","No alias","Glycine max","FTSH protease 9","protein_coding"
"Glyma.15G018800","No alias","Glycine max","AAA-type ATPase family protein","protein_coding"
"Glyma.15G158900","No alias","Glycine max","FTSH protease 8","protein_coding"
"Glyma.17G228100","No alias","Glycine max","FTSH protease 4","protein_coding"
"Glyma.18G065600","No alias","Glycine max","FTSH protease 9","protein_coding"
"Glyma.18G259700","No alias","Glycine max","FTSH protease 6","protein_coding"
"Glyma.20G227000","No alias","Glycine max","FtsH extracellular protease family","protein_coding"
"GRMZM2G004040","No alias","Zea mays","FTSH protease 11","protein_coding"
"GRMZM2G038401","No alias","Zea mays","FTSH protease 10","protein_coding"
"GRMZM2G048836","No alias","Zea mays","FTSH protease 6","protein_coding"
"GRMZM2G072865","No alias","Zea mays","FTSH protease 9","protein_coding"
"GRMZM2G087598","No alias","Zea mays","FtsH extracellular protease family","protein_coding"
"GRMZM2G096764","No alias","Zea mays","FTSH protease 4","protein_coding"
"GRMZM2G110408","No alias","Zea mays","FtsH extracellular protease family","protein_coding"
"GRMZM2G126361","No alias","Zea mays","FtsH extracellular protease family","protein_coding"
"GRMZM2G156069","No alias","Zea mays","FTSH protease 11","protein_coding"
"GRMZM2G163193","No alias","Zea mays","FTSH protease 9","protein_coding"
"GRMZM2G451483","No alias","Zea mays","FTSH protease 4","protein_coding"
"GRMZM2G463032","No alias","Zea mays","FTSH protease 4","protein_coding"
"HORVU1Hr1G072490.2","No alias","Hordeum vulgare","component *(Fts3/10) of FtsH3/10 matrix-AAA protease heterodimers","protein_coding"
"HORVU1Hr1G094900.6","No alias","Hordeum vulgare","ATP-dependent metalloprotease *(FtsH4/11)","protein_coding"
"HORVU2Hr1G089040.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU3Hr1G049910.1","No alias","Hordeum vulgare","ATP-dependent metalloprotease *(FtsH4/11)","protein_coding"
"HORVU3Hr1G054770.9","No alias","Hordeum vulgare","ATP-dependent metalloprotease *(FtsH4/11)","protein_coding"
"HORVU3Hr1G086170.5","No alias","Hordeum vulgare","component *(Fts3/10) of FtsH3/10 matrix-AAA protease heterodimers","protein_coding"
"HORVU4Hr1G016980.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU4Hr1G043640.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G040800.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G051380.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G119150.2","No alias","Hordeum vulgare","ATP-dependent metalloprotease *(FtsH4/11)","protein_coding"
"HORVU5Hr1G119160.5","No alias","Hordeum vulgare","ATP-dependent metalloprotease *(FtsH4/11)","protein_coding"
"HORVU5Hr1G119170.13","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G119200.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU5Hr1G119220.30","No alias","Hordeum vulgare","ATP-dependent metalloprotease *(FtsH4/11)","protein_coding"
"HORVU7Hr1G049880.1","No alias","Hordeum vulgare","Unknown function","protein_coding"
"HORVU7Hr1G107740.3","No alias","Hordeum vulgare","EXECUTER-cleavage protease *(FtsH2) & protease *(FtsH2/8) & component *(FtsH1/2/5/6/8) of FtsH plastidial protease complexes","protein_coding"
"HORVU7Hr1G121870.4","No alias","Hordeum vulgare","protease *(FtsH1/5) & component *(FtsH1/2/5/6/8) of FtsH plastidial protease complexes","protein_coding"
"Kfl00001_0670","kfl00001_0670_v1.1","Klebsormidium nitens","(q5z974|ftsh_orysa : 365.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Oryza sativa (Rice) & (at1g50250 : 364.0) encodes an FTSH protease that is localized to the chloroplast. Involved in the D1 repair cycle of Photosystem II. FtsH1 and FtsH5 are interchangeable in thylakoid membranes.; FTSH protease 1 (FTSH1); FUNCTIONS IN: metallopeptidase activity, protein binding, ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: photosystem II repair, PSII associated light-harvesting complex II catabolic process; LOCATED IN: thylakoid lumen, chloroplast thylakoid membrane, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642); BEST Arabidopsis thaliana protein match is: FtsH extracellular protease family (TAIR:AT5G42270.1); Has 39789 Blast hits to 37355 proteins in 3308 species: Archae - 1512; Bacteria - 16133; Metazoa - 4957; Fungi - 3666; Plants - 3305; Viruses - 34; Other Eukaryotes - 10182 (source: NCBI BLink). & (reliability: 658.0) &  (original description: no original description)","protein_coding"
"Kfl00095_0050","kfl00095_0050_v1.1","Klebsormidium nitens","(at1g50250 : 850.0) encodes an FTSH protease that is localized to the chloroplast. Involved in the D1 repair cycle of Photosystem II. FtsH1 and FtsH5 are interchangeable in thylakoid membranes.; FTSH protease 1 (FTSH1); FUNCTIONS IN: metallopeptidase activity, protein binding, ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: photosystem II repair, PSII associated light-harvesting complex II catabolic process; LOCATED IN: thylakoid lumen, chloroplast thylakoid membrane, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642); BEST Arabidopsis thaliana protein match is: FtsH extracellular protease family (TAIR:AT5G42270.1); Has 39789 Blast hits to 37355 proteins in 3308 species: Archae - 1512; Bacteria - 16133; Metazoa - 4957; Fungi - 3666; Plants - 3305; Viruses - 34; Other Eukaryotes - 10182 (source: NCBI BLink). & (q9bae0|ftsh_medsa : 849.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Medicago sativa (Alfalfa) & (reliability: 1700.0) &  (original description: no original description)","protein_coding"
"Kfl00132_0250","kfl00132_0250_v1.1","Klebsormidium nitens","(at5g64580 : 406.0) AAA-type ATPase family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, metalloendopeptidase activity, nucleotide binding, ATP binding; INVOLVED IN: embryo development; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642); BEST Arabidopsis thaliana protein match is: FTSH protease 1 (TAIR:AT1G50250.1); Has 43409 Blast hits to 41131 proteins in 3311 species: Archae - 1622; Bacteria - 19384; Metazoa - 4934; Fungi - 3903; Plants - 3224; Viruses - 61; Other Eukaryotes - 10281 (source: NCBI BLink). & (o82150|ftsh_tobac : 228.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) (DS9) - Nicotiana tabacum (Common tobacco) & (reliability: 812.0) &  (original description: no original description)","protein_coding"
"Kfl00136_0270","kfl00136_0270_v1.1","Klebsormidium nitens","(at1g07510 : 823.0) encodes an FtsH protease that is localized to the mitochondrion; FTSH protease 10 (ftsh10); FUNCTIONS IN: in 6 functions; INVOLVED IN: proteolysis, protein catabolic process; LOCATED IN: mitochondrion, chloroplast thylakoid membrane, plastid; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FTSH protease 3 (TAIR:AT2G29080.1); Has 37747 Blast hits to 35440 proteins in 3262 species: Archae - 1533; Bacteria - 14237; Metazoa - 4767; Fungi - 3643; Plants - 3223; Viruses - 27; Other Eukaryotes - 10317 (source: NCBI BLink). & (q5z974|ftsh_orysa : 398.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Oryza sativa (Rice) & (reliability: 1638.0) &  (original description: no original description)","protein_coding"
"Kfl00201_0150","kfl00201_0150_v1.1","Klebsormidium nitens","(at2g30950 : 919.0) Metalloprotease that functions in thylakoid membrane biogenesis. Involved in the repair of PSII following damaged incurred during photoinhibition. Forms a complex with VAR1. Mutants show a variegated phenotype, which decreases during development. Transcript and protein levels increase with light intensity.; VARIEGATED 2 (VAR2); FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity, zinc ion binding; INVOLVED IN: photoinhibition, oxygen and reactive oxygen species metabolic process, thylakoid membrane organization, PSII associated light-harvesting complex II catabolic process, protein catabolic process; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FTSH protease 8 (TAIR:AT1G06430.1); Has 42824 Blast hits to 40381 proteins in 3333 species: Archae - 1597; Bacteria - 18199; Metazoa - 4991; Fungi - 3835; Plants - 3350; Viruses - 34; Other Eukaryotes - 10818 (source: NCBI BLink). & (q5z974|ftsh_orysa : 516.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Oryza sativa (Rice) & (reliability: 1838.0) &  (original description: no original description)","protein_coding"
"Kfl00212_0060","kfl00212_0060_v1.1","Klebsormidium nitens","(at4g23940 : 379.0) FtsH extracellular protease family; FUNCTIONS IN: in 6 functions; INVOLVED IN: proteolysis; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), Peptidase M41 (InterPro:IPR000642); BEST Arabidopsis thaliana protein match is: FtsH extracellular protease family (TAIR:AT2G30950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q9bae0|ftsh_medsa : 278.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Medicago sativa (Alfalfa) & (reliability: 758.0) &  (original description: no original description)","protein_coding"
"Kfl00466_0050","kfl00466_0050_v1.1","Klebsormidium nitens","(at2g26140 : 699.0) encodes an FtsH protease that is localized to the mitochondrion; FTSH protease 4 (ftsh4); FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: proteolysis, protein catabolic process; LOCATED IN: mitochondrion, plastid, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase S16, Lon protease, C-terminal (InterPro:IPR001984); BEST Arabidopsis thaliana protein match is: FTSH protease 11 (TAIR:AT5G53170.1); Has 39775 Blast hits to 37259 proteins in 3240 species: Archae - 1584; Bacteria - 15744; Metazoa - 5149; Fungi - 3764; Plants - 3335; Viruses - 40; Other Eukaryotes - 10159 (source: NCBI BLink). & (q5z974|ftsh_orysa : 340.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Oryza sativa (Rice) & (reliability: 1398.0) &  (original description: no original description)","protein_coding"
"Kfl00964_0010","kfl00964_0010_v1.1","Klebsormidium nitens","(at5g53170 : 708.0) encodes an FtsH protease that is localized to the chloroplast and the mitochondrion; FTSH protease 11 (FTSH11); FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: response to heat, PSII associated light-harvesting complex II catabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642); BEST Arabidopsis thaliana protein match is: FTSH protease 4 (TAIR:AT2G26140.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q5z974|ftsh_orysa : 379.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Oryza sativa (Rice) & (reliability: 1416.0) &  (original description: no original description)","protein_coding"
"LOC_Os01g39250","No alias","Oryza sativa","OsFtsH4  FtsH protease, homologue of AtFtsH4, expressed","protein_coding"
"LOC_Os01g39260","No alias","Oryza sativa","OsFtsH5  FtsH protease, homologue of AtFtsH4, expressed","protein_coding"
"LOC_Os01g40820","No alias","Oryza sativa","peptidase family M41 containing protein, expressed","protein_coding"
"LOC_Os01g43150","No alias","Oryza sativa","OsFtsH9  FtsH protease, homologue of AtFtsH11, expressed","protein_coding"
"LOC_Os01g62500","No alias","Oryza sativa","OsFtsH3  FtsH protease, homologue of AtFtsH3/10, expressed","protein_coding"
"LOC_Os02g43350","No alias","Oryza sativa","OsFtsH7  FtsH protease, homologue of AtFtsH7, expressed","protein_coding"
"LOC_Os05g38400","No alias","Oryza sativa","OsFtsH8  FtsH protease, homologue of AtFtsH3/10, expressed","protein_coding"
"LOC_Os06g12370","No alias","Oryza sativa","OsFtsH6  FtsH protease, homologue of AtFtsH6, expressed","protein_coding"
"LOC_Os06g45820","No alias","Oryza sativa","OsFtsH2  FtsH protease, homologue of AtFtsH2/8, expressed","protein_coding"
"LOC_Os06g51029","No alias","Oryza sativa","OsFtsH1  FtsH protease, homologue of AtFtsH1/5, expressed","protein_coding"
"MA_10435616g0010","No alias","Picea abies","(at1g07510 : 379.0) encodes an FtsH protease that is localized to the mitochondrion; FTSH protease 10 (ftsh10); FUNCTIONS IN: in 6 functions; INVOLVED IN: proteolysis, protein catabolic process; LOCATED IN: mitochondrion, chloroplast thylakoid membrane, plastid; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FTSH protease 3 (TAIR:AT2G29080.1); Has 37747 Blast hits to 35440 proteins in 3262 species: Archae - 1533; Bacteria - 14237; Metazoa - 4767; Fungi - 3643; Plants - 3223; Viruses - 27; Other Eukaryotes - 10317 (source: NCBI BLink). & (q5z974|ftsh_orysa : 176.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Oryza sativa (Rice) & (reliability: 724.0) &  (original description: no original description)","protein_coding"
"MA_10435856g0010","No alias","Picea abies","(at4g23940 : 472.0) FtsH extracellular protease family; FUNCTIONS IN: in 6 functions; INVOLVED IN: proteolysis; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), Peptidase M41 (InterPro:IPR000642); BEST Arabidopsis thaliana protein match is: FtsH extracellular protease family (TAIR:AT2G30950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q5z974|ftsh_orysa : 144.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Oryza sativa (Rice) & (reliability: 944.0) &  (original description: no original description)","protein_coding"
"MA_10436679g0010","No alias","Picea abies","(at2g26140 : 698.0) encodes an FtsH protease that is localized to the mitochondrion; FTSH protease 4 (ftsh4); FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: proteolysis, protein catabolic process; LOCATED IN: mitochondrion, plastid, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase S16, Lon protease, C-terminal (InterPro:IPR001984); BEST Arabidopsis thaliana protein match is: FTSH protease 11 (TAIR:AT5G53170.1); Has 39775 Blast hits to 37259 proteins in 3240 species: Archae - 1584; Bacteria - 15744; Metazoa - 5149; Fungi - 3764; Plants - 3335; Viruses - 40; Other Eukaryotes - 10159 (source: NCBI BLink). & (q39444|ftsh_capan : 295.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) (Fragment) - Capsicum annuum (Bell pepper) & (reliability: 1396.0) &  (original description: no original description)","protein_coding"
"MA_134078g0010","No alias","Picea abies","(at3g47060 : 318.0) encodes an FtsH protease that is localized to the chloroplast; FTSH protease 7 (ftsh7); FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: proteolysis, protein catabolic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FTSH protease 9 (TAIR:AT5G58870.1); Has 41243 Blast hits to 38738 proteins in 3322 species: Archae - 1531; Bacteria - 17472; Metazoa - 4873; Fungi - 3612; Plants - 3353; Viruses - 32; Other Eukaryotes - 10370 (source: NCBI BLink). & (q9bae0|ftsh_medsa : 84.7) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Medicago sativa (Alfalfa) & (reliability: 636.0) &  (original description: no original description)","protein_coding"
"MA_14707g0010","No alias","Picea abies","(at2g30950 : 859.0) Metalloprotease that functions in thylakoid membrane biogenesis. Involved in the repair of PSII following damaged incurred during photoinhibition. Forms a complex with VAR1. Mutants show a variegated phenotype, which decreases during development. Transcript and protein levels increase with light intensity.; VARIEGATED 2 (VAR2); FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity, zinc ion binding; INVOLVED IN: photoinhibition, oxygen and reactive oxygen species metabolic process, thylakoid membrane organization, PSII associated light-harvesting complex II catabolic process, protein catabolic process; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FTSH protease 8 (TAIR:AT1G06430.1); Has 42824 Blast hits to 40381 proteins in 3333 species: Archae - 1597; Bacteria - 18199; Metazoa - 4991; Fungi - 3835; Plants - 3350; Viruses - 34; Other Eukaryotes - 10818 (source: NCBI BLink). & (q9bae0|ftsh_medsa : 483.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Medicago sativa (Alfalfa) & (reliability: 1718.0) &  (original description: no original description)","protein_coding"
"MA_188257g0010","No alias","Picea abies","(at1g06430 : 972.0) encodes a FtsH protease that is localized to the chloroplast; FTSH protease 8 (FTSH8); FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity, zinc ion binding; INVOLVED IN: PSII associated light-harvesting complex II catabolic process; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FtsH extracellular protease family (TAIR:AT2G30950.1); Has 41562 Blast hits to 39150 proteins in 3282 species: Archae - 1592; Bacteria - 17123; Metazoa - 4966; Fungi - 3846; Plants - 3320; Viruses - 34; Other Eukaryotes - 10681 (source: NCBI BLink). & (o82150|ftsh_tobac : 470.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) (DS9) - Nicotiana tabacum (Common tobacco) & (reliability: 1944.0) &  (original description: no original description)","protein_coding"
"Mp1g19790.1","No alias","Marchantia polymorpha","component FtsH7|9 of FtsH plastidial protease complexes","protein_coding"
"Mp2g03880.1","No alias","Marchantia polymorpha","component FtsH4|11 of FtsH mitochondrial protease complexes","protein_coding"
"Mp3g02030.1","No alias","Marchantia polymorpha","component Fts3|10 of FtsH3|10 matrix-AAA protease heterodimers","protein_coding"
"Mp3g06130.1","No alias","Marchantia polymorpha","component FtsH12 of protein translocation ATPase motor complex","protein_coding"
"Mp3g08790.1","No alias","Marchantia polymorpha","component FtsH1|2|5|6|8 of FtsH plastidial protease complexes","protein_coding"
"Mp4g19200.1","No alias","Marchantia polymorpha","component FtsH1|2|5|6|8 of FtsH plastidial protease complexes","protein_coding"
"Mp6g01370.1","No alias","Marchantia polymorpha","Probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic OS=Arabidopsis thaliana (sp|o22993|ftsi1_arath : 852.0)","protein_coding"
"Mp6g10290.1","No alias","Marchantia polymorpha","Probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic OS=Arabidopsis thaliana (sp|f4j3n2|ftsi5_arath : 758.0)","protein_coding"
"Mp6g15080.1","No alias","Marchantia polymorpha","component FtsHi of protein translocation ATPase motor complex","protein_coding"
"Mp7g18210.1","No alias","Marchantia polymorpha","component FtsH4|11 of FtsH mitochondrial protease complexes","protein_coding"
"Mp8g05580.1","No alias","Marchantia polymorpha","component FtsHi of protein translocation ATPase motor complex","protein_coding"
"Potri.001G089800","No alias","Populus trichocarpa","FtsH extracellular protease family","protein_coding"
"Potri.001G249100","No alias","Populus trichocarpa","FTSH protease 7","protein_coding"
"Potri.002G012000","No alias","Populus trichocarpa","FtsH extracellular protease family","protein_coding"
"Potri.002G215100","No alias","Populus trichocarpa","FtsH extracellular protease family","protein_coding"
"Potri.002G220200","No alias","Populus trichocarpa","FtsH extracellular protease family","protein_coding"
"Potri.005G249200","No alias","Populus trichocarpa","FtsH extracellular protease family","protein_coding"
"Potri.006G227700","No alias","Populus trichocarpa","FTSH protease 4","protein_coding"
"Potri.008G084600","No alias","Populus trichocarpa","FTSH protease 12","protein_coding"
"Potri.009G033600","No alias","Populus trichocarpa","FTSH protease 10","protein_coding"
"Potri.009G043100","No alias","Populus trichocarpa","FTSH protease 7","protein_coding"
"Potri.010G171300","No alias","Populus trichocarpa","FTSH protease 12","protein_coding"
"Potri.012G000700","No alias","Populus trichocarpa","FTSH protease 11","protein_coding"
"Potri.013G048700","No alias","Populus trichocarpa","FtsH extracellular protease family","protein_coding"
"Potri.014G139500","No alias","Populus trichocarpa","FtsH extracellular protease family","protein_coding"
"Potri.015G020700","No alias","Populus trichocarpa","FTSH protease 11","protein_coding"
"Potri.016G099800","No alias","Populus trichocarpa","FTSH protease 10","protein_coding"
"Potri.017G084000","No alias","Populus trichocarpa","FTSH protease 6","protein_coding"
"Pp1s10239_2V6","No alias","Physcomitrella patens","-2 peptidase metallo peptidase merops family m41 membrane protease catalytic subunit","protein_coding"
"Pp1s109_93V6","No alias","Physcomitrella patens","atp-dependent metalloprotease","protein_coding"
"Pp1s10_192V6","No alias","Physcomitrella patens","precursor of protein cell division protease ftsh-like protein","protein_coding"
"Pp1s10_296V6","No alias","Physcomitrella patens","atp-dependent metalloprotease","protein_coding"
"Pp1s118_166V6","No alias","Physcomitrella patens","aaa-metalloprotease chloroplast precursor","protein_coding"
"Pp1s12_121V6","No alias","Physcomitrella patens","atp-dependent metalloprotease","protein_coding"
"Pp1s146_88V6","No alias","Physcomitrella patens","atp-dependent protease-like protein","protein_coding"
"Pp1s156_30V6","No alias","Physcomitrella patens","cell division protein","protein_coding"
"Pp1s161_111V6","No alias","Physcomitrella patens","atp-dependent metalloprotease","protein_coding"
"Pp1s178_66V6","No alias","Physcomitrella patens","aaa-metalloprotease chloroplast precursor","protein_coding"
"Pp1s180_35V6","No alias","Physcomitrella patens","contains ESTs D28306(R1928A),AU164668(R1928) [Oryza sativa (japonica cultivar-group)]","protein_coding"
"Pp1s223_127V6","No alias","Physcomitrella patens","atp-dependent metalloprotease","protein_coding"
"Pp1s23_154V6","No alias","Physcomitrella patens","contains ESTs D28306(R1928A),AU164668(R1928) [Oryza sativa (japonica cultivar-group)]","protein_coding"
"Pp1s346_22V6","No alias","Physcomitrella patens","T9I4.16; FtsH protease, putative [EC:3.4.24.-] [Arabidopsis thaliana]","protein_coding"
"Pp1s39_149V6","No alias","Physcomitrella patens","T9I4.16; FtsH protease, putative [EC:3.4.24.-] [Arabidopsis thaliana]","protein_coding"
"Pp1s42_171V6","No alias","Physcomitrella patens","cell division protein","protein_coding"
"Pp1s44_78V6","No alias","Physcomitrella patens","cell division protein 2","protein_coding"
"Pp1s456_6V6","No alias","Physcomitrella patens","T9I4.16; FtsH protease, putative [EC:3.4.24.-] [Arabidopsis thaliana]","protein_coding"
"Pp1s9_115V6","No alias","Physcomitrella patens","cell division protein","protein_coding"
"Pp1s9_238V6","No alias","Physcomitrella patens","MFH8.11; FtsH protease, putative [Arabidopsis thaliana]","protein_coding"
"PSME_00003738-RA","No alias","Pseudotsuga menziesii","(at1g06430 : 965.0) encodes a FtsH protease that is localized to the chloroplast; FTSH protease 8 (FTSH8); FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity, zinc ion binding; INVOLVED IN: PSII associated light-harvesting complex II catabolic process; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FtsH extracellular protease family (TAIR:AT2G30950.1); Has 41562 Blast hits to 39150 proteins in 3282 species: Archae - 1592; Bacteria - 17123; Metazoa - 4966; Fungi - 3846; Plants - 3320; Viruses - 34; Other Eukaryotes - 10681 (source: NCBI BLink). & (o82150|ftsh_tobac : 471.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) (DS9) - Nicotiana tabacum (Common tobacco) & (reliability: 1930.0) &  (original description: no original description)","protein_coding"
"PSME_00004548-RA","No alias","Pseudotsuga menziesii","(at2g30950 : 197.0) Metalloprotease that functions in thylakoid membrane biogenesis. Involved in the repair of PSII following damaged incurred during photoinhibition. Forms a complex with VAR1. Mutants show a variegated phenotype, which decreases during development. Transcript and protein levels increase with light intensity.; VARIEGATED 2 (VAR2); FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity, zinc ion binding; INVOLVED IN: photoinhibition, oxygen and reactive oxygen species metabolic process, thylakoid membrane organization, PSII associated light-harvesting complex II catabolic process, protein catabolic process; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FTSH protease 8 (TAIR:AT1G06430.1); Has 42824 Blast hits to 40381 proteins in 3333 species: Archae - 1597; Bacteria - 18199; Metazoa - 4991; Fungi - 3835; Plants - 3350; Viruses - 34; Other Eukaryotes - 10818 (source: NCBI BLink). & (o82150|ftsh_tobac : 128.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) (DS9) - Nicotiana tabacum (Common tobacco) & (reliability: 394.0) &  (original description: no original description)","protein_coding"
"PSME_00007603-RA","No alias","Pseudotsuga menziesii","(q8lpb4|pskr_dauca : 191.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (at2g02220 : 190.0) Encodes a protein interacting with phytosulfokine, a five amino acid sulfated peptide (YIYTQ).; phytosulfokin receptor 1 (PSKR1); FUNCTIONS IN: peptide receptor activity, protein serine/threonine kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, response to wounding; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: phytosylfokine-alpha receptor 2 (TAIR:AT5G53890.1); Has 188205 Blast hits to 128830 proteins in 4018 species: Archae - 120; Bacteria - 18455; Metazoa - 56562; Fungi - 9680; Plants - 79633; Viruses - 405; Other Eukaryotes - 23350 (source: NCBI BLink). & (reliability: 362.0) &  (original description: no original description)","protein_coding"
"PSME_00011580-RA","No alias","Pseudotsuga menziesii","(at3g47060 : 280.0) encodes an FtsH protease that is localized to the chloroplast; FTSH protease 7 (ftsh7); FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: proteolysis, protein catabolic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FTSH protease 9 (TAIR:AT5G58870.1); Has 41243 Blast hits to 38738 proteins in 3322 species: Archae - 1531; Bacteria - 17472; Metazoa - 4873; Fungi - 3612; Plants - 3353; Viruses - 32; Other Eukaryotes - 10370 (source: NCBI BLink). & (reliability: 560.0) &  (original description: no original description)","protein_coding"
"PSME_00013414-RA","No alias","Pseudotsuga menziesii","(at1g06430 : 399.0) encodes a FtsH protease that is localized to the chloroplast; FTSH protease 8 (FTSH8); FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity, zinc ion binding; INVOLVED IN: PSII associated light-harvesting complex II catabolic process; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FtsH extracellular protease family (TAIR:AT2G30950.1); Has 41562 Blast hits to 39150 proteins in 3282 species: Archae - 1592; Bacteria - 17123; Metazoa - 4966; Fungi - 3846; Plants - 3320; Viruses - 34; Other Eukaryotes - 10681 (source: NCBI BLink). & (q39444|ftsh_capan : 258.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) (Fragment) - Capsicum annuum (Bell pepper) & (reliability: 798.0) &  (original description: no original description)","protein_coding"
"PSME_00014507-RA","No alias","Pseudotsuga menziesii","(at2g30950 : 828.0) Metalloprotease that functions in thylakoid membrane biogenesis. Involved in the repair of PSII following damaged incurred during photoinhibition. Forms a complex with VAR1. Mutants show a variegated phenotype, which decreases during development. Transcript and protein levels increase with light intensity.; VARIEGATED 2 (VAR2); FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity, zinc ion binding; INVOLVED IN: photoinhibition, oxygen and reactive oxygen species metabolic process, thylakoid membrane organization, PSII associated light-harvesting complex II catabolic process, protein catabolic process; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FTSH protease 8 (TAIR:AT1G06430.1); Has 42824 Blast hits to 40381 proteins in 3333 species: Archae - 1597; Bacteria - 18199; Metazoa - 4991; Fungi - 3835; Plants - 3350; Viruses - 34; Other Eukaryotes - 10818 (source: NCBI BLink). & (q5z974|ftsh_orysa : 447.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Oryza sativa (Rice) & (reliability: 1656.0) &  (original description: no original description)","protein_coding"
"PSME_00015054-RA","No alias","Pseudotsuga menziesii","(o82150|ftsh_tobac : 914.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) (DS9) - Nicotiana tabacum (Common tobacco) & (at1g50250 : 910.0) encodes an FTSH protease that is localized to the chloroplast. Involved in the D1 repair cycle of Photosystem II. FtsH1 and FtsH5 are interchangeable in thylakoid membranes.; FTSH protease 1 (FTSH1); FUNCTIONS IN: metallopeptidase activity, protein binding, ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: photosystem II repair, PSII associated light-harvesting complex II catabolic process; LOCATED IN: thylakoid lumen, chloroplast thylakoid membrane, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642); BEST Arabidopsis thaliana protein match is: FtsH extracellular protease family (TAIR:AT5G42270.1); Has 39789 Blast hits to 37355 proteins in 3308 species: Archae - 1512; Bacteria - 16133; Metazoa - 4957; Fungi - 3666; Plants - 3305; Viruses - 34; Other Eukaryotes - 10182 (source: NCBI BLink). & (reliability: 1820.0) &  (original description: no original description)","protein_coding"
"PSME_00017959-RA","No alias","Pseudotsuga menziesii","(at1g06430 : 481.0) encodes a FtsH protease that is localized to the chloroplast; FTSH protease 8 (FTSH8); FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity, zinc ion binding; INVOLVED IN: PSII associated light-harvesting complex II catabolic process; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FtsH extracellular protease family (TAIR:AT2G30950.1); Has 41562 Blast hits to 39150 proteins in 3282 species: Archae - 1592; Bacteria - 17123; Metazoa - 4966; Fungi - 3846; Plants - 3320; Viruses - 34; Other Eukaryotes - 10681 (source: NCBI BLink). & (o82150|ftsh_tobac : 313.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) (DS9) - Nicotiana tabacum (Common tobacco) & (reliability: 962.0) &  (original description: no original description)","protein_coding"
"PSME_00017963-RA","No alias","Pseudotsuga menziesii","(at1g06430 : 270.0) encodes a FtsH protease that is localized to the chloroplast; FTSH protease 8 (FTSH8); FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity, zinc ion binding; INVOLVED IN: PSII associated light-harvesting complex II catabolic process; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FtsH extracellular protease family (TAIR:AT2G30950.1); Has 41562 Blast hits to 39150 proteins in 3282 species: Archae - 1592; Bacteria - 17123; Metazoa - 4966; Fungi - 3846; Plants - 3320; Viruses - 34; Other Eukaryotes - 10681 (source: NCBI BLink). & (q39444|ftsh_capan : 137.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) (Fragment) - Capsicum annuum (Bell pepper) & (reliability: 540.0) &  (original description: no original description)","protein_coding"
"PSME_00022023-RA","No alias","Pseudotsuga menziesii","(at1g06430 : 316.0) encodes a FtsH protease that is localized to the chloroplast; FTSH protease 8 (FTSH8); FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity, zinc ion binding; INVOLVED IN: PSII associated light-harvesting complex II catabolic process; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FtsH extracellular protease family (TAIR:AT2G30950.1); Has 41562 Blast hits to 39150 proteins in 3282 species: Archae - 1592; Bacteria - 17123; Metazoa - 4966; Fungi - 3846; Plants - 3320; Viruses - 34; Other Eukaryotes - 10681 (source: NCBI BLink). & (q39444|ftsh_capan : 205.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) (Fragment) - Capsicum annuum (Bell pepper) & (reliability: 632.0) &  (original description: no original description)","protein_coding"
"PSME_00024159-RA","No alias","Pseudotsuga menziesii","(at1g06430 : 277.0) encodes a FtsH protease that is localized to the chloroplast; FTSH protease 8 (FTSH8); FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity, zinc ion binding; INVOLVED IN: PSII associated light-harvesting complex II catabolic process; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FtsH extracellular protease family (TAIR:AT2G30950.1); Has 41562 Blast hits to 39150 proteins in 3282 species: Archae - 1592; Bacteria - 17123; Metazoa - 4966; Fungi - 3846; Plants - 3320; Viruses - 34; Other Eukaryotes - 10681 (source: NCBI BLink). & (q39444|ftsh_capan : 145.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) (Fragment) - Capsicum annuum (Bell pepper) & (reliability: 554.0) &  (original description: no original description)","protein_coding"
"PSME_00024461-RA","No alias","Pseudotsuga menziesii","(at1g06430 : 204.0) encodes a FtsH protease that is localized to the chloroplast; FTSH protease 8 (FTSH8); FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity, zinc ion binding; INVOLVED IN: PSII associated light-harvesting complex II catabolic process; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FtsH extracellular protease family (TAIR:AT2G30950.1); Has 41562 Blast hits to 39150 proteins in 3282 species: Archae - 1592; Bacteria - 17123; Metazoa - 4966; Fungi - 3846; Plants - 3320; Viruses - 34; Other Eukaryotes - 10681 (source: NCBI BLink). & (q39444|ftsh_capan : 103.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) (Fragment) - Capsicum annuum (Bell pepper) & (reliability: 408.0) &  (original description: no original description)","protein_coding"
"PSME_00025056-RA","No alias","Pseudotsuga menziesii"," no hits & (original description: no original description)","protein_coding"
"PSME_00027307-RA","No alias","Pseudotsuga menziesii","(at2g30950 : 300.0) Metalloprotease that functions in thylakoid membrane biogenesis. Involved in the repair of PSII following damaged incurred during photoinhibition. Forms a complex with VAR1. Mutants show a variegated phenotype, which decreases during development. Transcript and protein levels increase with light intensity.; VARIEGATED 2 (VAR2); FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity, zinc ion binding; INVOLVED IN: photoinhibition, oxygen and reactive oxygen species metabolic process, thylakoid membrane organization, PSII associated light-harvesting complex II catabolic process, protein catabolic process; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FTSH protease 8 (TAIR:AT1G06430.1); Has 42824 Blast hits to 40381 proteins in 3333 species: Archae - 1597; Bacteria - 18199; Metazoa - 4991; Fungi - 3835; Plants - 3350; Viruses - 34; Other Eukaryotes - 10818 (source: NCBI BLink). & (q39444|ftsh_capan : 165.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) (Fragment) - Capsicum annuum (Bell pepper) & (reliability: 600.0) &  (original description: no original description)","protein_coding"
"PSME_00033493-RA","No alias","Pseudotsuga menziesii","(at5g53170 : 451.0) encodes an FtsH protease that is localized to the chloroplast and the mitochondrion; FTSH protease 11 (FTSH11); FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: response to heat, PSII associated light-harvesting complex II catabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642); BEST Arabidopsis thaliana protein match is: FTSH protease 4 (TAIR:AT2G26140.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q5z974|ftsh_orysa : 233.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Oryza sativa (Rice) & (reliability: 902.0) &  (original description: no original description)","protein_coding"
"PSME_00035382-RA","No alias","Pseudotsuga menziesii","(at2g26140 : 879.0) encodes an FtsH protease that is localized to the mitochondrion; FTSH protease 4 (ftsh4); FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: proteolysis, protein catabolic process; LOCATED IN: mitochondrion, plastid, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase S16, Lon protease, C-terminal (InterPro:IPR001984); BEST Arabidopsis thaliana protein match is: FTSH protease 11 (TAIR:AT5G53170.1); Has 39775 Blast hits to 37259 proteins in 3240 species: Archae - 1584; Bacteria - 15744; Metazoa - 5149; Fungi - 3764; Plants - 3335; Viruses - 40; Other Eukaryotes - 10159 (source: NCBI BLink). & (q5z974|ftsh_orysa : 347.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Oryza sativa (Rice) & (reliability: 1758.0) &  (original description: no original description)","protein_coding"
"PSME_00038780-RA","No alias","Pseudotsuga menziesii","(at2g29080 : 1015.0) encodes an FtsH protease that is localized to the mitochondrion; FTSH protease 3 (ftsh3); FUNCTIONS IN: ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: proteolysis, protein catabolic process; LOCATED IN: mitochondrion, chloroplast thylakoid membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FTSH protease 10 (TAIR:AT1G07510.1); Has 42068 Blast hits to 39734 proteins in 3332 species: Archae - 1581; Bacteria - 17420; Metazoa - 4814; Fungi - 3774; Plants - 3280; Viruses - 30; Other Eukaryotes - 11169 (source: NCBI BLink). & (q5z974|ftsh_orysa : 420.0) Cell division protease ftsH homolog, chloroplast precursor (EC 3.4.24.-) - Oryza sativa (Rice) & (reliability: 2008.0) &  (original description: no original description)","protein_coding"
"Seita.1G253900.1","No alias","Setaria italica ","component *(FtsH7/9) of FtsH plastidial protease complexes","protein_coding"
"Seita.3G121400.1","No alias","Setaria italica ","ATP-dependent metalloprotease *(FtsH4/11)","protein_coding"
"Seita.3G217900.1","No alias","Setaria italica ","component *(Fts3/10) of FtsH3/10 matrix-AAA protease heterodimers","protein_coding"
"Seita.4G099200.1","No alias","Setaria italica ","EXECUTER-cleavage protease *(FtsH2) & protease *(FtsH2/8) & component *(FtsH1/2/5/6/8) of FtsH plastidial protease complexes","protein_coding"
"Seita.4G267400.1","No alias","Setaria italica ","EXECUTER-cleavage protease *(FtsH2) & protease *(FtsH2/8) & component *(FtsH1/2/5/6/8) of FtsH plastidial protease complexes","protein_coding"
"Seita.4G285900.1","No alias","Setaria italica ","protease *(FtsH1/5) & component *(FtsH1/2/5/6/8) of FtsH plastidial protease complexes","protein_coding"
"Seita.5G207700.1","No alias","Setaria italica ","ATP-dependent metalloprotease *(FtsH4/11)","protein_coding"
"Seita.5G229300.1","No alias","Setaria italica ","ATP-dependent metalloprotease *(FtsH4/11)","protein_coding"
"Seita.5G377900.1","No alias","Setaria italica ","component *(Fts3/10) of FtsH3/10 matrix-AAA protease heterodimers","protein_coding"
"Sobic.003G195000.1","No alias","Sorghum bicolor ","ATP-dependent metalloprotease *(FtsH4/11)","protein_coding"
"Sobic.003G222900.1","No alias","Sorghum bicolor ","ATP-dependent metalloprotease *(FtsH4/11)","protein_coding"
"Sobic.003G352900.1","No alias","Sorghum bicolor ","component *(Fts3/10) of FtsH3/10 matrix-AAA protease heterodimers","protein_coding"
"Sobic.004G300000.1","No alias","Sorghum bicolor ","component *(FtsH7/9) of FtsH plastidial protease complexes","protein_coding"
"Sobic.009G162600.1","No alias","Sorghum bicolor ","component *(Fts3/10) of FtsH3/10 matrix-AAA protease heterodimers","protein_coding"
"Sobic.009G256500.1","No alias","Sorghum bicolor ","ATP-dependent metalloprotease *(FtsH4/11)","protein_coding"
"Sobic.010G092900.1","No alias","Sorghum bicolor ","EXECUTER-cleavage protease *(FtsH2) & protease *(FtsH2/8) & component *(FtsH1/2/5/6/8) of FtsH plastidial protease complexes","protein_coding"
"Sobic.010G223200.1","No alias","Sorghum bicolor ","EXECUTER-cleavage protease *(FtsH2) & protease *(FtsH2/8) & component *(FtsH1/2/5/6/8) of FtsH plastidial protease complexes","protein_coding"
"Sobic.010G272800.1","No alias","Sorghum bicolor ","protease *(FtsH1/5) & component *(FtsH1/2/5/6/8) of FtsH plastidial protease complexes","protein_coding"
"Solyc02g032970","No alias","Solanum lycopersicum","ATP-dependent zinc metalloprotease FtsH (AHRD V3.3 *** A0A0B0PX39_GOSAR)","protein_coding"
"Solyc02g079000","No alias","Solanum lycopersicum","ATP-dependent zinc metalloprotease FTSH protein (AHRD V3.3 *** G7LB10_MEDTR)","protein_coding"
"Solyc02g081550","No alias","Solanum lycopersicum","LeftsH6FtsH protease","protein_coding"
"Solyc03g007330","No alias","Solanum lycopersicum","ATP-dependent zinc metalloprotease FTSH protein (AHRD V3.3 *** A0A072VFQ6_MEDTR)","protein_coding"
"Solyc04g082250","No alias","Solanum lycopersicum","FtsH-like protein precursor","protein_coding"
"Solyc06g005950","No alias","Solanum lycopersicum","ATP-dependent zinc metalloprotease FTSH protein (AHRD V3.3 *** G7K6A4_MEDTR)","protein_coding"
"Solyc08g063050","No alias","Solanum lycopersicum","ATP-dependent zinc metalloprotease FTSH protein (AHRD V3.3 *** G7J7N5_MEDTR)","protein_coding"
"Solyc08g082530","No alias","Solanum lycopersicum","ATP-dependent zinc metalloprotease FtsH (AHRD V3.3 *** W9SBH3_9ROSA)","protein_coding"
"Solyc09g010950","No alias","Solanum lycopersicum","ATP-dependent zinc metalloprotease FtsH (AHRD V3.3 *** A0A0K9PCT4_ZOSMR)","protein_coding"
"Solyc10g086540","No alias","Solanum lycopersicum","ATP-dependent zinc metalloprotease FtsH (AHRD V3.3 *** A0A0K9PCT4_ZOSMR)","protein_coding"
"Solyc10g086550","No alias","Solanum lycopersicum","ATP-dependent zinc metalloprotease FTSH protein (AHRD V3.3 *** G7JUV4_MEDTR)","protein_coding"
"Solyc11g069950","No alias","Solanum lycopersicum","FtsH protease","protein_coding"
"Sopen02g011360","No alias","Solanum pennellii","ATPase family associated with various cellular activities (AAA)","protein_coding"
"Sopen02g023810","No alias","Solanum pennellii","ATPase family associated with various cellular activities (AAA)","protein_coding"
"Sopen02g026180","No alias","Solanum pennellii","Peptidase family M41","protein_coding"
"Sopen03g003290","No alias","Solanum pennellii","Peptidase family M41","protein_coding"
"Sopen04g035870","No alias","Solanum pennellii","Peptidase family M41","protein_coding"
"Sopen06g001920","No alias","Solanum pennellii","ATPase family associated with various cellular activities (AAA)","protein_coding"
"Sopen07g026900","No alias","Solanum pennellii","Peptidase family M41","protein_coding"
"Sopen08g018620","No alias","Solanum pennellii","Peptidase family M41","protein_coding"
"Sopen08g030790","No alias","Solanum pennellii","ATPase family associated with various cellular activities (AAA)","protein_coding"
"Sopen09g005670","No alias","Solanum pennellii","Peptidase family M41","protein_coding"
"Sopen10g035920","No alias","Solanum pennellii","Peptidase family M41","protein_coding"
"Sopen10g035930","No alias","Solanum pennellii","Peptidase family M41","protein_coding"
"Sopen11g028630","No alias","Solanum pennellii","Peptidase family M41","protein_coding"
"Sopen12g022670","No alias","Solanum pennellii","ATPase family associated with various cellular activities (AAA)","protein_coding"